MD09G1120800.v1.1

Protein of unknown function (DUF568)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Forward (+)
9343390 .. 9344709
1320 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1120800.v1.1.491

Sequence Viewer

Length: 1320 bp
ATGATCAATTACATCAACCTCAATACCAAACACATAAATGTTAACAAAAGCTTGCCAACCAATTCTACATCCCTAGCTTCCACTCTCTTTGATATTCAATCCTTCTTCCCAGCCATCAATATGCTCTTCCTCTTGTCCCTTTTCCTTCTCTTTTCCTTTCCCTATGTCACATTTTCCGCCCACTGCACCACCACCACCCCCACTAAAACCTTTCAAAAATGCATCACACTCCCTACCCAACAAGCCTCCATAGCATGGACTTTCCATCCCCACAATGCCACCCTAGACCTTGTTTTCTTTGGTACTTTCATATCCCCTTCCGGGTGGGTCGGGTGGGGCATCAATCCGACCTCTGCGGAAATGACTGGCACGCGTGCTCTGATCGCCTTTCCGGACCCTAGCACCGGTCAAATAGTCGTCCTCCCTTACCTCTTAGACCCAACCACAAAGCTCCAAAAACGCCCTCTCCTCTCCCGCCCTCTTGACATCCACATTCTCGCCTCGTCTGCCACCCTATACGGCGGAAAATTAGCCACCGTCCACGGCGGCGCTTCCATCCAAATATTCGCTACATTGAAACTCACGCCGAACAGGACAAAGCTCCACCACGTGTGGAACCGTGGTCTCTACGTCCAAGGCTACTCGCCGACCATACACCCAACCACCGCTAACGACCTTTCATCCATAACAACATTCGATGTCATGTCAGGCACTACGGCCACGCACCACTCCAACATTGGCACACTCAGAACAGTGCATGGCATCATGAACGCCATTGCATGGGGCATCATGCTTCCCATTGGAGCAGTGCTTGCACGCTACCTCAGGCACATACAATCATTAGGTCCCACATGGTTCTATGTGCACGCTGGGGTCCAACTGTTTGCCTTTTTCCTAGGGACTGTAGGGTTTGCTATTGGGATTAGGCTTGGGGATATGTCACCTGGGGTCCAGTATGGGCTCCACAGGAAGCTAGGGTTCGCAGCATTTTGCTTGGGAGCGCTTCAAACCCTAGCACTACTGTTTCGACCTAAAACTACAAACAAGTACAGGAAGTACTGGAAATCTTACCACCATTTAGTTGGGTATGCATGTGTGGTGCTGGGTGTGGTGAATGTTTTCCAAGGTTTTGAGGTGATGGGAGAAGGGAGGTCTTTTGCTAAGCTGGTTTATTGCTTGGGATTGTCTACACTGATTGGGGTTTGCATTGCTTTGGAGGTGAATTCTTGGGTGGTTTTTTGTAGAAAATCAAAGGAGGAGAAGATGAGGAGGGAAGGTATATTTGGAGCGTCGGATAAAGGCAGCGGAATCTTCAGATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

440

Amino Acids

48.36

Weight (kDa)

9.8

Isoelectric Point (pI)

33.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF568 PF04526 121 - 233 3.2e-21 Protein of unknown function (DUF568)
Cytochrom_B561 PF03188 282 - 377 1.3e-07 Eukaryotic cytochrome b561
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012003)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 255, 780
AccI GTMKAC 1 cut(s) 1187
AccII CGCG 1 cut(s) 373
AccIII TCCGGA 1 cut(s) 391
AciI CCGC 7 cut(s) 177, 356, 475, 522, 546, 666, 1305
AcoI YGGCCR 1 cut(s) 717
AcsI RAATTY 1 cut(s) 1222
AcuI CTGAAG 1 cut(s) 1297
AcvI CACGTG 1 cut(s) 610
AdeI CACNNNGTG 1 cut(s) 610
AfaI GTAC 3 cut(s) 304, 1049, 1058
AfeI AGCGCT 1 cut(s) 1002
AfiI CCNNNNNNNGG 4 cut(s) 255, 321, 404, 780
AflIII ACRYGT 2 cut(s) 371, 609
AgeI ACCGGT 1 cut(s) 404
AgsI TTSAA 4 cut(s) 98, 215, 577, 1007
AjnI CCWGG 1 cut(s) 943
AjuI GAANNNNNNNTTGG 2 cut(s) 1266, 1298
AluBI AGCT 6 cut(s) 51, 77, 451, 601, 973, 1165
AluI AGCT 6 cut(s) 51, 77, 451, 601, 973, 1165
Alw21I GWGCWC 2 cut(s) 379, 867
Alw26I GTCTC 1 cut(s) 629
Alw44I GTGCAC 1 cut(s) 863
Aor13HI TCCGGA 1 cut(s) 391
Aor51HI AGCGCT 1 cut(s) 1002
AoxI GGCC 1 cut(s) 717
ApaLI GTGCAC 1 cut(s) 863
ApeKI GCWGC 2 cut(s) 983, 1302
ApoI RAATTY 1 cut(s) 1222
AsiGI ACCGGT 1 cut(s) 404
Asp700I GAANNNNTTC 1 cut(s) 1118
AspA2I CCTAGG 1 cut(s) 895
AspLEI GCGC 2 cut(s) 551, 1003
AspS9I GGNCC 4 cut(s) 394, 845, 874, 949
AsuC2I CCSGG 1 cut(s) 322
AsuHPI GGTGA 4 cut(s) 933, 1123, 1147, 1231
AvaII GGWCC 4 cut(s) 394, 845, 874, 949
AvrII CCTAGG 1 cut(s) 895
AxyI CCTNAGG 1 cut(s) 824
BaeGI GKGCMC 1 cut(s) 867
BanII GRGCYC 1 cut(s) 963
BbrPI CACGTG 1 cut(s) 610
Bbv12I GWGCWC 2 cut(s) 379, 867
BbvI GCAGC 2 cut(s) 995, 1314
BccI CCATC 4 cut(s) 122, 273, 563, 1132
BceAI ACGGC 3 cut(s) 535, 559, 732
BciT130I CCWGG 1 cut(s) 945
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 322
BcoDI GTCTC 1 cut(s) 629
BfaI CTAG 6 cut(s) 74, 284, 399, 896, 974, 1013
BfmI CTRYAG 1 cut(s) 903
BfoI RGCGCY 2 cut(s) 552, 1004
BisI GCNGC 3 cut(s) 547, 984, 1303
BlnI CCTAGG 1 cut(s) 895
BlpI GCTNAGC 1 cut(s) 1161
BlsI GCNGC 3 cut(s) 548, 985, 1304
BmcAI AGTACT 1 cut(s) 1058
Bme1390I CCNGG 2 cut(s) 322, 945
Bme18I GGWCC 4 cut(s) 394, 845, 874, 949
BmgT120I GGNCC 4 cut(s) 394, 845, 874, 949
BmiI GGNNCC 6 cut(s) 396, 617, 847, 875, 950, 962
BmrFI CCNGG 2 cut(s) 322, 945
BmsI GCATC 4 cut(s) 231, 348, 771, 795
Bpu1102I GCTNAGC 1 cut(s) 1161
BpuMI CCSGG 1 cut(s) 322
BsaAI YACGTR 1 cut(s) 610
BsaI GGTCTC 1 cut(s) 629
BsaJI CCNNGG 6 cut(s) 541, 619, 634, 895, 944, 1123
BsaWI WCCGGW 2 cut(s) 391, 404
BsaXI ACNNNNNCTCC 4 cut(s) 450, 480, 1261, 1291
Bsc4I CCNNNNNNNGG 4 cut(s) 255, 321, 404, 780
Bse118I RCCGGY 1 cut(s) 404
Bse1I ACTGG 3 cut(s) 370, 952, 1064
Bse21I CCTNAGG 1 cut(s) 824
Bse3DI GCAATG 2 cut(s) 774, 1206
BseAI TCCGGA 1 cut(s) 391
BseBI CCWGG 1 cut(s) 945
BseDI CCNNGG 6 cut(s) 541, 619, 634, 895, 944, 1123
BseGI GGATG 5 cut(s) 68, 265, 486, 555, 680
BseLI CCNNNNNNNGG 4 cut(s) 255, 321, 404, 780
BseMI GCAATG 2 cut(s) 774, 1206
BseMII CTCAG 2 cut(s) 760, 838
BseNI ACTGG 3 cut(s) 370, 952, 1064
BseRI GAGGAG 3 cut(s) 458, 1271, 1282
BseSI GKGCMC 1 cut(s) 867
BseXI GCAGC 2 cut(s) 995, 1314
BseYI CCCAGC 3 cut(s) 109, 869, 1102
BsgI GTGCAG 1 cut(s) 169
Bsh1236I CGCG 1 cut(s) 373
BshFI GGCC 1 cut(s) 719
BshTI ACCGGT 1 cut(s) 404
BsiHKAI GWGCWC 2 cut(s) 379, 867
BsiSI CCGG 3 cut(s) 321, 392, 405
BslFI GGGAC 3 cut(s) 121, 831, 913
BslI CCNNNNNNNGG 4 cut(s) 255, 321, 404, 780
BsmAI GTCTC 1 cut(s) 629
BsmFI GGGAC 3 cut(s) 121, 831, 913
BsnI GGCC 1 cut(s) 719
Bso31I GGTCTC 1 cut(s) 629
Bsp1286I GDGCHC 3 cut(s) 379, 867, 963
Bsp13I TCCGGA 1 cut(s) 391
Bsp143I GATC 2 cut(s) 3, 381
Bsp1720I GCTNAGC 1 cut(s) 1161
BspACI CCGC 7 cut(s) 177, 356, 475, 522, 546, 666, 1305
BspANI GGCC 1 cut(s) 719
BspCNI CTCAG 2 cut(s) 759, 837
BspEI TCCGGA 1 cut(s) 391
BspFNI CGCG 1 cut(s) 373
BspHI TCATGA 1 cut(s) 765
BspLI GGNNCC 6 cut(s) 396, 617, 847, 875, 950, 962
BspQI GCTCTTC 1 cut(s) 131
BspTNI GGTCTC 1 cut(s) 629
BsrDI GCAATG 2 cut(s) 774, 1206
BsrFI RCCGGY 1 cut(s) 404
BsrI ACTGG 3 cut(s) 370, 952, 1064
BssAI RCCGGY 1 cut(s) 404
BssECI CCNNGG 6 cut(s) 541, 619, 634, 895, 944, 1123
BssMI GATC 2 cut(s) 3, 381
BssT1I CCWWGG 3 cut(s) 634, 895, 1123
Bst2UI CCWGG 1 cut(s) 945
Bst4CI ACNGT 6 cut(s) 538, 620, 754, 882, 904, 1023
Bst6I CTCTTC 1 cut(s) 131
BstAPI GCANNNNNTGC 1 cut(s) 812
BstBAI YACGTR 1 cut(s) 610
BstC8I GCNNGC 6 cut(s) 53, 371, 375, 813, 817, 867
BstDEI CTNAG 4 cut(s) 433, 746, 824, 1161
BstDSI CCRYGG 2 cut(s) 541, 619
BstF5I GGATG 5 cut(s) 68, 265, 486, 555, 680
BstFNI CGCG 1 cut(s) 373
BstH2I RGCGCY 2 cut(s) 552, 1004
BstHHI GCGC 2 cut(s) 551, 1003
BstKTI GATC 2 cut(s) 6, 384
BstMAI GTCTC 1 cut(s) 629
BstMBI GATC 2 cut(s) 3, 381
BstMWI GCNNNNNNNGC 4 cut(s) 251, 383, 506, 812
BstNI CCWGG 1 cut(s) 945
BstNSI RCATGY 1 cut(s) 1095
BstSCI CCNGG 2 cut(s) 320, 943
BstSFI CTRYAG 1 cut(s) 903
BstSLI GKGCMC 1 cut(s) 867
BstUI CGCG 1 cut(s) 373
BstV1I GCAGC 2 cut(s) 995, 1314
BstXI CCANNNNNNTGG 1 cut(s) 1082
Bsu36I CCTNAGG 1 cut(s) 824
BsuRI GGCC 1 cut(s) 719
BtgI CCRYGG 2 cut(s) 541, 619
BtsCI GGATG 5 cut(s) 68, 265, 486, 555, 680
BtsI GCAGTG 2 cut(s) 181, 813
BtsIMutI CAGTG 4 cut(s) 181, 759, 813, 1190
Cac8I GCNNGC 6 cut(s) 53, 371, 375, 813, 817, 867
CciI TCATGA 1 cut(s) 765
CfoI GCGC 2 cut(s) 551, 1003
Cfr10I RCCGGY 1 cut(s) 404
Cfr13I GGNCC 4 cut(s) 394, 845, 874, 949
CseI GACGC 1 cut(s) 1278
Csp6I GTAC 3 cut(s) 303, 1048, 1057
CspAI ACCGGT 1 cut(s) 404
CspCI CAANNNNNGTGG 2 cut(s) 70, 105
CviAII CATG 8 cut(s) 255, 703, 758, 766, 780, 790, 852, 1092
CviQI GTAC 3 cut(s) 303, 1048, 1057
DdeI CTNAG 4 cut(s) 433, 746, 824, 1161
DpnI GATC 2 cut(s) 5, 383
DpnII GATC 2 cut(s) 3, 381
DraIII CACNNNGTG 1 cut(s) 610
EaeI YGGCCR 1 cut(s) 717
Eam1104I CTCTTC 1 cut(s) 131
EarI CTCTTC 1 cut(s) 131
EciI GGCGGA 2 cut(s) 166, 537
Eco130I CCWWGG 3 cut(s) 634, 895, 1123
Eco24I GRGCYC 1 cut(s) 963
Eco31I GGTCTC 1 cut(s) 629
Eco47I GGWCC 4 cut(s) 394, 845, 874, 949
Eco47III AGCGCT 1 cut(s) 1002
Eco57I CTGAAG 1 cut(s) 1297
Eco72I CACGTG 1 cut(s) 610
Eco81I CCTNAGG 1 cut(s) 824
EcoO109I RGGNCCY 1 cut(s) 845
EcoRI GAATTC 1 cut(s) 1222
EcoRII CCWGG 1 cut(s) 943
EcoT14I CCWWGG 3 cut(s) 634, 895, 1123
EcoT22I ATGCAT 2 cut(s) 224, 1093
EcoT38I GRGCYC 1 cut(s) 963
ErhI CCWWGG 3 cut(s) 634, 895, 1123
FaeI CATG 8 cut(s) 258, 706, 761, 769, 783, 793, 855, 1095
FaqI GGGAC 3 cut(s) 121, 831, 913
FatI CATG 8 cut(s) 254, 702, 757, 765, 779, 789, 851, 1091
FauI CCCGC 1 cut(s) 482
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 1187
Fnu4HI GCNGC 3 cut(s) 547, 984, 1303
FokI GGATG 5 cut(s) 55, 252, 473, 542, 667
FriOI GRGCYC 1 cut(s) 963
Fsp4HI GCNGC 3 cut(s) 547, 984, 1303
FspBI CTAG 6 cut(s) 74, 284, 399, 896, 974, 1013
GlaI GCGC 2 cut(s) 550, 1002
GluI GCNGC 3 cut(s) 547, 984, 1303
GsaI CCCAGC 3 cut(s) 113, 873, 1106
HaeII RGCGCY 2 cut(s) 552, 1004
HaeIII GGCC 1 cut(s) 719
HapII CCGG 3 cut(s) 321, 392, 405
HgaI GACGC 1 cut(s) 1278
HhaI GCGC 2 cut(s) 551, 1003
Hin1II CATG 8 cut(s) 258, 706, 761, 769, 783, 793, 855, 1095
Hin6I GCGC 2 cut(s) 549, 1001
HinP1I GCGC 2 cut(s) 549, 1001
HincII GTYRAC 1 cut(s) 43
HindII GTYRAC 1 cut(s) 43
HindIII AAGCTT 1 cut(s) 49
HinfI GANTC 1 cut(s) 1308
HpaI GTTAAC 1 cut(s) 43
HpaII CCGG 3 cut(s) 321, 392, 405
HphI GGTGA 4 cut(s) 933, 1123, 1147, 1231
Hpy166II GTNNAC 4 cut(s) 43, 541, 865, 1188
Hpy188I TCNGA 5 cut(s) 348, 381, 749, 1294, 1316
Hpy188III TCNNGA 3 cut(s) 392, 482, 766
Hpy8I GTNNAC 4 cut(s) 43, 541, 865, 1188
Hpy99I CGWCG 1 cut(s) 1294
HpyAV CCTTC 5 cut(s) 112, 155, 327, 1139, 1268
HpyCH4III ACNGT 6 cut(s) 538, 620, 754, 882, 904, 1023
HpyCH4IV ACGT 2 cut(s) 609, 630
HpyCH4V TGCA 8 cut(s) 186, 222, 757, 779, 815, 865, 1091, 1206
HpyF10VI GCNNNNNNNGC 4 cut(s) 251, 383, 506, 812
HpyF3I CTNAG 4 cut(s) 433, 746, 824, 1161
HpySE526I ACGT 2 cut(s) 609, 630
Hsp92II CATG 8 cut(s) 258, 706, 761, 769, 783, 793, 855, 1095
HspAI GCGC 2 cut(s) 549, 1001
Kpn2I TCCGGA 1 cut(s) 391
Ksp22I TGATCA 1 cut(s) 3
KspAI GTTAAC 1 cut(s) 43
Kzo9I GATC 2 cut(s) 3, 381
LguI GCTCTTC 1 cut(s) 131
LmnI GCTCC 6 cut(s) 456, 606, 803, 966, 998, 1286
Lsp1109I GCAGC 2 cut(s) 995, 1314
LweI GCATC 4 cut(s) 231, 348, 771, 795
MaeI CTAG 6 cut(s) 74, 284, 399, 896, 974, 1013
MaeII ACGT 2 cut(s) 609, 630
MaeIII GTNAC 2 cut(s) 166, 939
MalI GATC 2 cut(s) 5, 383
MboI GATC 2 cut(s) 3, 381
MboII GAAGA 4 cut(s) 97, 118, 1273, 1303
MhlI GDGCHC 3 cut(s) 379, 867, 963
MluCI AATT 4 cut(s) 7, 61, 527, 1222
MluI ACGCGT 1 cut(s) 371
MmeI TCCRAC 4 cut(s) 371, 756, 901, 1272
Mph1103I ATGCAT 2 cut(s) 224, 1093
MroI TCCGGA 1 cut(s) 391
MroXI GAANNNNTTC 1 cut(s) 1118
MseI TTAA 1 cut(s) 42
MslI CAYNNNNRTG 2 cut(s) 36, 119
MspA1I CMGCKG 1 cut(s) 1305
MspI CCGG 3 cut(s) 321, 392, 405
MspR9I CCNGG 2 cut(s) 322, 945
MvaI CCWGG 1 cut(s) 945
MvnI CGCG 1 cut(s) 373
MwoI GCNNNNNNNGC 4 cut(s) 251, 383, 506, 812
NciI CCSGG 1 cut(s) 322
NdeII GATC 2 cut(s) 3, 381
NlaIII CATG 8 cut(s) 258, 706, 761, 769, 783, 793, 855, 1095
NlaIV GGNNCC 6 cut(s) 396, 617, 847, 875, 950, 962
NmuCI GTSAC 2 cut(s) 166, 939
NsiI ATGCAT 2 cut(s) 224, 1093
NspI RCATGY 1 cut(s) 1095
PagI TCATGA 1 cut(s) 765
PciSI GCTCTTC 1 cut(s) 131
PdmI GAANNNNTTC 1 cut(s) 1118
PfeI GAWTC 1 cut(s) 1308
PflMI CCANNNNNTGG 2 cut(s) 255, 780
PinAI ACCGGT 1 cut(s) 404
PkrI GCNGC 3 cut(s) 548, 985, 1304
PmaCI CACGTG 1 cut(s) 610
PmlI CACGTG 1 cut(s) 610
Ppu21I YACGTR 1 cut(s) 610
PpuMI RGGWCCY 1 cut(s) 845
Psp5II RGGWCCY 1 cut(s) 845
Psp6I CCWGG 1 cut(s) 943
PspCI CACGTG 1 cut(s) 610
PspFI CCCAGC 3 cut(s) 109, 869, 1102
PspGI CCWGG 1 cut(s) 943
PspN4I GGNNCC 6 cut(s) 396, 617, 847, 875, 950, 962
PspPI GGNCC 4 cut(s) 394, 845, 874, 949
PspPPI RGGWCCY 1 cut(s) 845
RsaI GTAC 3 cut(s) 304, 1049, 1058
RsaNI GTAC 3 cut(s) 303, 1048, 1057
RseI CAYNNNNRTG 2 cut(s) 36, 119
SapI GCTCTTC 1 cut(s) 131
SaqAI TTAA 1 cut(s) 42
SatI GCNGC 3 cut(s) 547, 984, 1303
Sau3AI GATC 2 cut(s) 3, 381
Sau96I GGNCC 4 cut(s) 394, 845, 874, 949
ScaI AGTACT 1 cut(s) 1058
ScrFI CCNGG 2 cut(s) 322, 945
SduI GDGCHC 3 cut(s) 379, 867, 963
SfaNI GCATC 4 cut(s) 231, 348, 771, 795
SfcI CTRYAG 1 cut(s) 903
SinI GGWCC 4 cut(s) 394, 845, 874, 949
SmiMI CAYNNNNRTG 2 cut(s) 36, 119
Sse9I AATT 4 cut(s) 7, 61, 527, 1222
SsiI CCGC 7 cut(s) 177, 356, 475, 522, 546, 666, 1305
SspI AATATT 1 cut(s) 564
SspMI CTAG 6 cut(s) 74, 284, 399, 896, 974, 1013
StyD4I CCNGG 2 cut(s) 320, 943
StyI CCWWGG 3 cut(s) 634, 895, 1123
TaaI ACNGT 6 cut(s) 538, 620, 754, 882, 904, 1023
TaiI ACGT 2 cut(s) 612, 633
TaqI TCGA 2 cut(s) 696, 1027
TasI AATT 4 cut(s) 7, 61, 527, 1222
TatI WGTACW 2 cut(s) 1047, 1056
TauI GCSGC 1 cut(s) 549
TfiI GAWTC 1 cut(s) 1308
Tru1I TTAA 1 cut(s) 42
Tru9I TTAA 1 cut(s) 42
TscAI CASTG 4 cut(s) 188, 759, 813, 1197
TseFI GTSAC 2 cut(s) 166, 939
TseI GCWGC 2 cut(s) 983, 1302
Tsp45I GTSAC 2 cut(s) 166, 939
TspDTI ATGAA 3 cut(s) 298, 669, 782
TspRI CASTG 4 cut(s) 188, 759, 813, 1197
Van91I CCANNNNNTGG 2 cut(s) 255, 780
VneI GTGCAC 1 cut(s) 863
VpaK11BI GGWCC 4 cut(s) 394, 845, 874, 949
XapI RAATTY 1 cut(s) 1222
XceI RCATGY 1 cut(s) 1095
XcmI CCANNNNNNNNNTGG 2 cut(s) 734, 1079
XmaJI CCTAGG 1 cut(s) 895
XmiI GTMKAC 1 cut(s) 1187
XmnI GAANNNNTTC 1 cut(s) 1118
XspI CTAG 6 cut(s) 74, 284, 399, 896, 974, 1013
ZrmI AGTACT 1 cut(s) 1058
Zsp2I ATGCAT 2 cut(s) 224, 1093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.