Rorug02G0456600

Protein of unknown function (DUF568)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0012003
Physical Location & Seq
Reverse (-)
58649360 .. 58665957
16598 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0456600.1

Sequence Viewer

Length: 2292 bp
ATGTGGAGGATTGAGTATGGAAAGGGTGCAAATGACCCTCATTTATTCAGCACAAACAACTTGCATGGGAGGCAGACATGGAAGTTTGACCCAAATGCAGGCACACCAGTAGAGAGAGCAGAGGTTGAAGCCGCTCGTGAGAATTACTACCAAAATCGGTTCAAGATCCAGCCCAGTAGTGATCTCCTTTGGCGTTTTCAGATGCTAAGAGAGAGAAACTTCAAGCAAGAAATTCCTCCAGTAAGAATTGGGGAAGGTGATGACATTACATTTGATCAGGCCACAGCTGCCTATAGGAGGGCTGCTACCTTCTGGAATGCCTTGCAATCACCCCATGGTCATTGGCCTGCTGAAATTGCTGGCATAAATTTTTTCTGTCCTCCCTTGGTAATGAGTTTATACTCAATGGGACATCTTAATGTTGTTTTCTCTGCTGAACATAAGAAGGAAATCTTGCGCTACTCGTACAATCATCAGAATGAAGATGGTGGGTGGGGATTGCACATAGCAGGGCCTAGTATGATGTTCACCACATGTCTCAACTACTGTATGATGCGTATCCTCGGAGAAGGCACTGAGGGCGGTCGAGATAATGCCTGTGCAAGGGCCCGGAAATGGATTCTTGACCGCGGTGGTGCACAATATTCTGCTTCATGGGGAAAGACCTGGATGGCGATACTTGGTGTTTATGATTGGGAAGGAAGCAACCCTATACCCCCGGAGTTTTGGACTTACCCCACTCTGCTTCCTTTTCATCCATCAAAGATGTTGTGCTACTGTAGGTTAACTTACCTACCCATGTCCTACTTTTATGCAAAAAAGTTTGTTGGCCCAATCACTCCTCTGGTTGAACAATTGAGACAAGAAATTTACTGTGAACCTTACAGTGAAATTAAGTGGAGTAAAGTGCGCCATCATTGTGCAAAGGAAGATAACTACTATCCTCATGGAAGGGTACAACGTTTTATGTGGGACACTCTTTACCATGTTTGTGAGCCTATTCTTGCTTGGTGGCCCTTTAAGAAGATCAGAGACAATGCTGTTCAATTTACCATTGACCAAATCCATTATGAAGATGAGAACAGTCGCTACATTACCATTGGATGTATCGAAAAGCCATTAATGATGCTTGCCTGTTGGGTTGAGGATCCTAGCGGAGAAGCTTTTAAGAAGCATCTTCCTAGACTTGATGATTATATTTGGGTCGGTGAAGATGGAATCAAGATTCAGAGTTTTGGCAGCCAGACTTGGGATTGTTCTCTTGCAATCCAATCTTTGCTTGCTGGGAATCTCCATAATGAATTTGGACCTGTACTTAAGAAAGCACATGACTTCCTAAAGATATCCCAGGTGAGGATCAATCCTTGTGGTGACTACCTAGCTCATTTCCGTCACATTTCCAAAGGATGCTGGACTTTCTCTGATCGGGATCATGGATGGCAAGTTTCAGATTGCACTGCAGAAGCATTGAGGTGCTGCTGTCTGTTTGCAATGATGTCACCAGAGGAGGTTGGCGAGCCAATGGAAGCCGAGTGTATGTATGATGCTGTCAATGTCATAATGTCACTACAGAGTCCAAATGGTGGTGTATCAGCATGGGAGCCGACTGGAGCTCCTAAATGGTTGGAGTGGCTCAACCCTGTCGAATTTTTTGAGGACCTTGTCATTGAATATGATTACATCGAGTGCACTTCATCTTCGATTCAGGCCTTAGTTTTGTTTAGGAAGTTGTATCCTAATCACAGAAGGAAAGAGATCAACAACTTCATCACAAGGGCTGCAGACTACATTGAAAGCATACAATACGCTGATGGCTCATGGTATGGAAACTGGGGTATCTGCTTTCTCTATGGAACATGGTTTGGAATCAAAGGGTTAGAGGCTGCAGGAAGAACCTACCACAATTGCGAGGCAGTTCGCAAAGGTGTTGACTTTTTGCTAAAAACACAAAGGGAAGATGGTGGTTGGGGAGAGCACTACACCTCATGCACGAACAAGAAATACACAGCTCAAGACAGTACAAATCTGGTGCAAACTGCCCTCGGATTAATGGGTCTAATTCACGGTCGACAGGGTGAGAGAGATCCAACTCCTATTCACCGTGCTGCAAGGGTCTTGATGAATGGTCAGTTGGATGATGGTGATTTTCCCCAACAGGAACTGGTGGGAGTTTTCATGAGGAATGCAATGTTACACTATGGAGGATATAGGAATGTTTTCCCATTGTGGGCTCTTGGAGAGTATCGTACGTACTCTGGAGCAGTTGCTTTAGCAAAAGGATTTGAACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cytochrom_B561 DUF568

Protein Analysis

763

Amino Acids

87.89

Weight (kDa)

6.13

Isoelectric Point (pI)

43.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SQHop_cyclase_N PF13249 100 - 401 8.1e-34 Squalene-hopene cyclase N-terminal domain
SQHop_cyclase_C PF13243 414 - 749 1.5e-47 Squalene-hopene cyclase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012003)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G04850
fragaria_vesca FvH4_6g41290
malus_domestica MD09G1120800.v1.1 MD17G1111800.v1.1
prunus_persica Prupe.3G202700_v2.0.a1
pyrus_communis pycom09g04540 pycom17g10370
rosa_chinensis RchiOBHm_Chr2g0156851
rosa_laevigata RLG00000020946
rosa_multiflora Rmu_co8482377.1_g000001 Rmu_sc0008149.1_g000001 Rmu_ssc0000286.1_g000024
rosa_roxburghii Rroxscaffold_2G00092670
rosa_rugosa Rorug02G0456600
rosa_samantha Rh2AG522200 Rh2BG535600 Rh2CG507100 Rh2DG544600
rosa_wichuraiana Rw2G043120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1583
AccBSI CCGCTC 1 cut(s) 134
AccI GTMKAC 1 cut(s) 2068
AccII CGCG 1 cut(s) 630
AciI CCGC 5 cut(s) 132, 582, 628, 630, 1155
AclI AACGTT 1 cut(s) 961
AclWI GGATC 6 cut(s) 160, 1142, 1155, 1364, 1437, 2078
AcsI RAATTY 5 cut(s) 231, 367, 867, 1301, 1646
AfaI GTAC 6 cut(s) 467, 957, 1314, 2020, 2248, 2252
AfiI CCNNNNNNNGG 8 cut(s) 98, 297, 603, 615, 1249, 1353, 1583, 2227
AflII CTTAAG 1 cut(s) 1316
AflIII ACRYGT 1 cut(s) 533
AgsI TTSAA 8 cut(s) 128, 163, 223, 851, 1046, 1670, 1793, 2285
AjnI CCWGG 2 cut(s) 665, 1347
AjuI GAANNNNNNNTTGG 2 cut(s) 2114, 2146
AluBI AGCT 5 cut(s) 287, 1163, 1382, 1613, 2009
AluI AGCT 5 cut(s) 287, 1163, 1382, 1613, 2009
Alw21I GWGCWC 4 cut(s) 640, 1615, 1691, 1977
Alw26I GTCTC 3 cut(s) 542, 853, 1026
Alw44I GTGCAC 2 cut(s) 636, 1687
AlwI GGATC 6 cut(s) 160, 1142, 1155, 1364, 1437, 2078
AlwNI CAGNNNCTG 1 cut(s) 2161
AoxI GGCC 7 cut(s) 279, 344, 512, 606, 829, 1013, 1707
ApaI GGGCCC 1 cut(s) 610
ApaLI GTGCAC 2 cut(s) 636, 1687
ApeKI GCWGC 7 cut(s) 287, 302, 1239, 1476, 1778, 1883, 2105
ApoI RAATTY 5 cut(s) 231, 367, 867, 1301, 1646
ArsI GACNNNNNNTTYG 2 cut(s) 254, 286
AseI ATTAAT 2 cut(s) 1121, 2048
Asp700I GAANNNNTTC 1 cut(s) 2216
AspLEI GCGC 2 cut(s) 459, 912
AspS9I GGNCC 7 cut(s) 512, 606, 607, 830, 1014, 1307, 1657
AsuC2I CCSGG 2 cut(s) 610, 719
AvaII GGWCC 2 cut(s) 1307, 1657
BaeGI GKGCMC 3 cut(s) 610, 640, 1691
BaeI ACNNNNGTAYC 2 cut(s) 1819, 1852
BamHI GGATCC 1 cut(s) 1147
BanII GRGCYC 3 cut(s) 610, 1615, 2233
BauI CACGAG 1 cut(s) 135
Bbv12I GWGCWC 4 cut(s) 640, 1615, 1691, 1977
BbvI GCAGC 7 cut(s) 274, 289, 1251, 1463, 1765, 1870, 2092
BccI CCATC 9 cut(s) 479, 664, 766, 921, 1208, 1431, 1805, 1952, 2132
BciT130I CCWGG 2 cut(s) 667, 1349
BciVI GTATCC 2 cut(s) 569, 1743
BclI TGATCA 1 cut(s) 274
BcnI CCSGG 2 cut(s) 610, 719
BcoDI GTCTC 3 cut(s) 542, 853, 1026
BfaI CTAG 4 cut(s) 516, 1152, 1182, 1379
BfmI CTRYAG 6 cut(s) 292, 778, 1458, 1568, 1779, 1884
BfrI CTTAAG 1 cut(s) 1316
BfuI GTATCC 2 cut(s) 569, 1743
BisI GCNGC 8 cut(s) 132, 288, 303, 1240, 1477, 1779, 1884, 2106
BlsI GCNGC 8 cut(s) 133, 289, 304, 1241, 1478, 1780, 1885, 2107
Bme1390I CCNGG 4 cut(s) 610, 667, 719, 1349
Bme18I GGWCC 2 cut(s) 1307, 1657
BmgT120I GGNCC 7 cut(s) 512, 606, 607, 830, 1014, 1307, 1657
BmiI GGNNCC 3 cut(s) 608, 1149, 1602
BmrFI CCNGG 4 cut(s) 610, 667, 719, 1349
BmrI ACTGGG 2 cut(s) 168, 1840
BmsI GCATC 6 cut(s) 192, 543, 1116, 1183, 1397, 1534
BmuI ACTGGG 2 cut(s) 168, 1840
BpmI CTGGAG 3 cut(s) 222, 1629, 2277
BpuEI CTTGAG 1 cut(s) 1995
BpuMI CCSGG 2 cut(s) 610, 719
BsaAI YACGTR 1 cut(s) 2250
BsaBI GATNNNNATC 2 cut(s) 557, 1428
BsaJI CCNNGG 7 cut(s) 334, 384, 562, 628, 717, 1347, 2041
BsaXI ACNNNNNCTCC 2 cut(s) 1597, 1627
Bsc4I CCNNNNNNNGG 8 cut(s) 98, 297, 603, 615, 1249, 1353, 1583, 2227
Bse1I ACTGG 6 cut(s) 107, 174, 239, 1612, 1835, 2166
Bse3DI GCAATG 2 cut(s) 1497, 2193
Bse8I GATNNNNATC 2 cut(s) 557, 1428
BseBI CCWGG 2 cut(s) 667, 1349
BseDI CCNNGG 7 cut(s) 334, 384, 562, 628, 717, 1347, 2041
BseGI GGATG 6 cut(s) 675, 754, 1109, 1412, 1442, 2140
BseJI GATNNNNATC 2 cut(s) 557, 1428
BseLI CCNNNNNNNGG 8 cut(s) 98, 297, 603, 615, 1249, 1353, 1583, 2227
BseMI GCAATG 2 cut(s) 1497, 2193
BseMII CTCAG 1 cut(s) 567
BseNI ACTGG 6 cut(s) 107, 174, 239, 1612, 1835, 2166
BseRI GAGGAG 2 cut(s) 831, 1520
BseSI GKGCMC 3 cut(s) 610, 640, 1691
BseXI GCAGC 7 cut(s) 274, 289, 1251, 1463, 1765, 1870, 2092
BseYI CCCAGC 1 cut(s) 1283
Bsh1236I CGCG 1 cut(s) 630
Bsh1285I CGRYCG 2 cut(s) 586, 2068
BshFI GGCC 7 cut(s) 281, 346, 514, 608, 831, 1015, 1709
BsiEI CGRYCG 2 cut(s) 586, 2068
BsiHKAI GWGCWC 4 cut(s) 640, 1615, 1691, 1977
BsiSI CCGG 2 cut(s) 610, 719
BsiWI CGTACG 1 cut(s) 2246
BslFI GGGAC 2 cut(s) 423, 986
BslI CCNNNNNNNGG 8 cut(s) 98, 297, 603, 615, 1249, 1353, 1583, 2227
BsmAI GTCTC 3 cut(s) 542, 853, 1026
BsmFI GGGAC 2 cut(s) 423, 986
BsmI GAATGC 2 cut(s) 322, 2188
BsnI GGCC 7 cut(s) 281, 346, 514, 608, 831, 1015, 1709
Bsp120I GGGCCC 1 cut(s) 606
Bsp1286I GDGCHC 6 cut(s) 610, 640, 1615, 1691, 1977, 2233
Bsp19I CCATGG 1 cut(s) 334
BspACI CCGC 5 cut(s) 132, 582, 628, 630, 1155
BspANI GGCC 7 cut(s) 281, 346, 514, 608, 831, 1015, 1709
BspCNI CTCAG 1 cut(s) 568
BspFNI CGCG 1 cut(s) 630
BspHI TCATGA 1 cut(s) 2175
BspLI GGNNCC 3 cut(s) 608, 1149, 1602
BspMAI CTGCAG 3 cut(s) 1462, 1783, 1888
BspPI GGATC 6 cut(s) 160, 1142, 1155, 1364, 1437, 2078
BspTI CTTAAG 1 cut(s) 1316
BsrBI CCGCTC 1 cut(s) 134
BsrDI GCAATG 2 cut(s) 1497, 2193
BsrI ACTGG 6 cut(s) 107, 174, 239, 1612, 1835, 2166
BssECI CCNNGG 7 cut(s) 334, 384, 562, 628, 717, 1347, 2041
BssSI CACGAG 1 cut(s) 135
BssT1I CCWWGG 2 cut(s) 334, 384
Bst2BI CACGAG 1 cut(s) 135
Bst2UI CCWGG 2 cut(s) 667, 1349
Bst4CI ACNGT 8 cut(s) 548, 779, 875, 887, 1085, 2018, 2066, 2102
BstAFI CTTAAG 1 cut(s) 1316
BstBAI YACGTR 1 cut(s) 2250
BstC8I GCNNGC 6 cut(s) 100, 348, 361, 1131, 1281, 1517
BstDEI CTNAG 3 cut(s) 206, 576, 1711
BstDSI CCRYGG 2 cut(s) 334, 628
BstENI CCTNNNNNAGG 2 cut(s) 295, 601
BstF5I GGATG 6 cut(s) 675, 754, 1109, 1412, 1442, 2140
BstFNI CGCG 1 cut(s) 630
BstHHI GCGC 2 cut(s) 459, 912
BstMAI GTCTC 3 cut(s) 542, 853, 1026
BstMCI CGRYCG 2 cut(s) 586, 2068
BstMWI GCNNNNNNNGC 4 cut(s) 70, 287, 356, 579
BstNI CCWGG 2 cut(s) 667, 1349
BstNSI RCATGY 1 cut(s) 537
BstSCI CCNGG 4 cut(s) 608, 665, 717, 1347
BstSFI CTRYAG 6 cut(s) 292, 778, 1458, 1568, 1779, 1884
BstSLI GKGCMC 3 cut(s) 610, 640, 1691
BstSNI TACGTA 1 cut(s) 2250
BstUI CGCG 1 cut(s) 630
BstV1I GCAGC 7 cut(s) 274, 289, 1251, 1463, 1765, 1870, 2092
BstX2I RGATCY 3 cut(s) 165, 1147, 2083
BstYI RGATCY 3 cut(s) 165, 1147, 2083
BsuI GTATCC 2 cut(s) 569, 1743
BsuRI GGCC 7 cut(s) 281, 346, 514, 608, 831, 1015, 1709
BtgI CCRYGG 2 cut(s) 334, 628
BtsCI GGATG 6 cut(s) 675, 754, 1109, 1412, 1442, 2140
BtsI GCAGTG 1 cut(s) 1455
BtsIMutI CAGTG 3 cut(s) 573, 892, 1455
Cac8I GCNNGC 6 cut(s) 100, 348, 361, 1131, 1281, 1517
CaiI CAGNNNCTG 1 cut(s) 2161
CciI TCATGA 1 cut(s) 2175
CfoI GCGC 2 cut(s) 459, 912
Cfr13I GGNCC 7 cut(s) 512, 606, 607, 830, 1014, 1307, 1657
Cfr42I CCGCGG 1 cut(s) 631
Csp6I GTAC 6 cut(s) 466, 956, 1313, 2019, 2247, 2251
CspCI CAANNNNNGTGG 2 cut(s) 1348, 1383
CviQI GTAC 6 cut(s) 466, 956, 1313, 2019, 2247, 2251
DdeI CTNAG 3 cut(s) 206, 576, 1711
Ecl136II GAGCTC 1 cut(s) 1613
Eco105I TACGTA 1 cut(s) 2250
Eco130I CCWWGG 2 cut(s) 334, 384
Eco147I AGGCCT 1 cut(s) 1709
Eco24I GRGCYC 3 cut(s) 610, 1615, 2233
Eco32I GATATC 1 cut(s) 1344
Eco47I GGWCC 2 cut(s) 1307, 1657
Eco53kI GAGCTC 1 cut(s) 1613
EcoICRI GAGCTC 1 cut(s) 1613
EcoNI CCTNNNNNAGG 2 cut(s) 295, 601
EcoO109I RGGNCCY 3 cut(s) 512, 606, 1657
EcoRII CCWGG 2 cut(s) 665, 1347
EcoRV GATATC 1 cut(s) 1344
EcoT14I CCWWGG 2 cut(s) 334, 384
EcoT38I GRGCYC 3 cut(s) 610, 1615, 2233
ErhI CCWWGG 2 cut(s) 334, 384
FalI AAGNNNNNCTT 2 cut(s) 437, 469
FaqI GGGAC 2 cut(s) 423, 986
FbaI TGATCA 1 cut(s) 274
FblI GTMKAC 1 cut(s) 2068
Fnu4HI GCNGC 8 cut(s) 132, 288, 303, 1240, 1477, 1779, 1884, 2106
FokI GGATG 6 cut(s) 682, 741, 1116, 1419, 1449, 2147
FriOI GRGCYC 3 cut(s) 610, 1615, 2233
Fsp4HI GCNGC 8 cut(s) 132, 288, 303, 1240, 1477, 1779, 1884, 2106
FspBI CTAG 4 cut(s) 516, 1152, 1182, 1379
GlaI GCGC 2 cut(s) 458, 911
GluI GCNGC 8 cut(s) 132, 288, 303, 1240, 1477, 1779, 1884, 2106
GsaI CCCAGC 1 cut(s) 1287
GsuI CTGGAG 3 cut(s) 222, 1629, 2277
HaeIII GGCC 7 cut(s) 281, 346, 514, 608, 831, 1015, 1709
HapII CCGG 2 cut(s) 610, 719
HhaI GCGC 2 cut(s) 459, 912
Hin6I GCGC 2 cut(s) 457, 910
HinP1I GCGC 2 cut(s) 457, 910
HincII GTYRAC 3 cut(s) 786, 1930, 2069
HindII GTYRAC 3 cut(s) 786, 1930, 2069
HindIII AAGCTT 1 cut(s) 1161
HinfI GANTC 7 cut(s) 619, 1218, 1225, 1288, 1573, 1702, 1866
HpaI GTTAAC 1 cut(s) 786
HpaII CCGG 2 cut(s) 610, 719
Hpy166II GTNNAC 7 cut(s) 528, 638, 786, 878, 1689, 1930, 2069
Hpy188I TCNGA 8 cut(s) 201, 477, 566, 1031, 1230, 1423, 1450, 2045
Hpy8I GTNNAC 7 cut(s) 528, 638, 786, 878, 1689, 1930, 2069
HpyAV CCTTC 7 cut(s) 248, 319, 439, 563, 692, 945, 1740
HpyCH4III ACNGT 8 cut(s) 548, 779, 875, 887, 1085, 2018, 2066, 2102
HpyCH4IV ACGT 2 cut(s) 961, 2249
HpyF10VI GCNNNNNNNGC 4 cut(s) 70, 287, 356, 579
HpyF3I CTNAG 3 cut(s) 206, 576, 1711
HpySE526I ACGT 2 cut(s) 961, 2249
HspAI GCGC 2 cut(s) 457, 910
Ksp22I TGATCA 1 cut(s) 274
KspAI GTTAAC 1 cut(s) 786
KspI CCGCGG 1 cut(s) 631
LmnI GCTCC 4 cut(s) 1600, 1610, 1618, 2258
Lsp1109I GCAGC 7 cut(s) 274, 289, 1251, 1463, 1765, 1870, 2092
LweI GCATC 6 cut(s) 192, 543, 1116, 1183, 1397, 1534
MaeI CTAG 4 cut(s) 516, 1152, 1182, 1379
MaeII ACGT 2 cut(s) 961, 2249
MaeIII GTNAC 5 cut(s) 1370, 1391, 1497, 1563, 2190
MbiI CCGCTC 1 cut(s) 134
MboII GAAGA 9 cut(s) 494, 941, 1036, 1085, 1169, 1223, 1689, 1902, 1967
MfeI CAATTG 2 cut(s) 854, 1903
MflI RGATCY 3 cut(s) 165, 1147, 2083
MhlI GDGCHC 6 cut(s) 610, 640, 1615, 1691, 1977, 2233
MlyI GAGTC 1 cut(s) 1582
MmeI TCCRAC 3 cut(s) 1605, 2111, 2112
MroXI GAANNNNTTC 1 cut(s) 2216
MseI TTAA 8 cut(s) 417, 785, 894, 1020, 1121, 1167, 1317, 2048
MslI CAYNNNNRTG 5 cut(s) 417, 477, 918, 990, 1471
MspA1I CMGCKG 2 cut(s) 287, 630
MspCI CTTAAG 1 cut(s) 1316
MspI CCGG 2 cut(s) 610, 719
MspR9I CCNGG 4 cut(s) 610, 667, 719, 1349
MunI CAATTG 2 cut(s) 854, 1903
Mva1269I GAATGC 2 cut(s) 322, 2188
MvaI CCWGG 2 cut(s) 667, 1349
MvnI CGCG 1 cut(s) 630
MwoI GCNNNNNNNGC 4 cut(s) 70, 287, 356, 579
NciI CCSGG 2 cut(s) 610, 719
NcoI CCATGG 1 cut(s) 334
NlaIV GGNNCC 3 cut(s) 608, 1149, 1602
NmeAIII GCCGAG 1 cut(s) 1555
NmuCI GTSAC 4 cut(s) 1370, 1391, 1497, 1563
NspI RCATGY 1 cut(s) 537
PagI TCATGA 1 cut(s) 2175
PceI AGGCCT 1 cut(s) 1709
PciI ACATGT 1 cut(s) 533
PctI GAATGC 2 cut(s) 322, 2188
PdmI GAANNNNTTC 1 cut(s) 2216
PfeI GAWTC 6 cut(s) 619, 1218, 1225, 1288, 1702, 1866
Pfl23II CGTACG 1 cut(s) 2246
PflFI GACNNNGTC 1 cut(s) 1661
PflMI CCANNNNNTGG 1 cut(s) 1583
PkrI GCNGC 8 cut(s) 133, 289, 304, 1241, 1478, 1780, 1885, 2107
PleI GAGTC 1 cut(s) 1581
PpsI GAGTC 1 cut(s) 1581
Ppu21I YACGTR 1 cut(s) 2250
PpuMI RGGWCCY 1 cut(s) 1657
PscI ACATGT 1 cut(s) 533
PshBI ATTAAT 2 cut(s) 1121, 2048
Psp124BI GAGCTC 1 cut(s) 1615
Psp1406I AACGTT 1 cut(s) 961
Psp5II RGGWCCY 1 cut(s) 1657
Psp6I CCWGG 2 cut(s) 665, 1347
PspFI CCCAGC 1 cut(s) 1283
PspGI CCWGG 2 cut(s) 665, 1347
PspLI CGTACG 1 cut(s) 2246
PspN4I GGNNCC 3 cut(s) 608, 1149, 1602
PspOMI GGGCCC 1 cut(s) 606
PspPI GGNCC 7 cut(s) 512, 606, 607, 830, 1014, 1307, 1657
PspPPI RGGWCCY 1 cut(s) 1657
PsrI GAACNNNNNNTAC 4 cut(s) 1073, 1105, 1985, 2017
PstI CTGCAG 3 cut(s) 1462, 1783, 1888
PstNI CAGNNNCTG 1 cut(s) 2161
PsuI RGATCY 3 cut(s) 165, 1147, 2083
PsyI GACNNNGTC 1 cut(s) 1661
PvuII CAGCTG 1 cut(s) 287
RsaI GTAC 6 cut(s) 467, 957, 1314, 2020, 2248, 2252
RsaNI GTAC 6 cut(s) 466, 956, 1313, 2019, 2247, 2251
RseI CAYNNNNRTG 5 cut(s) 417, 477, 918, 990, 1471
SacI GAGCTC 1 cut(s) 1615
SacII CCGCGG 1 cut(s) 631
SalI GTCGAC 1 cut(s) 2067
SaqAI TTAA 8 cut(s) 417, 785, 894, 1020, 1121, 1167, 1317, 2048
SatI GCNGC 8 cut(s) 132, 288, 303, 1240, 1477, 1779, 1884, 2106
Sau96I GGNCC 7 cut(s) 512, 606, 607, 830, 1014, 1307, 1657
SchI GAGTC 1 cut(s) 1582
ScrFI CCNGG 4 cut(s) 610, 667, 719, 1349
SduI GDGCHC 6 cut(s) 610, 640, 1615, 1691, 1977, 2233
SfaNI GCATC 6 cut(s) 192, 543, 1116, 1183, 1397, 1534
SfcI CTRYAG 6 cut(s) 292, 778, 1458, 1568, 1779, 1884
Sfr303I CCGCGG 1 cut(s) 631
SgrBI CCGCGG 1 cut(s) 631
SinI GGWCC 2 cut(s) 1307, 1657
SmiMI CAYNNNNRTG 5 cut(s) 417, 477, 918, 990, 1471
SmlI CTYRAG 2 cut(s) 1316, 2010
SmoI CTYRAG 2 cut(s) 1316, 2010
SnaBI TACGTA 1 cut(s) 2250
SseBI AGGCCT 1 cut(s) 1709
SsiI CCGC 5 cut(s) 132, 582, 628, 630, 1155
SspI AATATT 1 cut(s) 644
SspMI CTAG 4 cut(s) 516, 1152, 1182, 1379
SstI GAGCTC 1 cut(s) 1615
StuI AGGCCT 1 cut(s) 1709
StyD4I CCNGG 4 cut(s) 608, 665, 717, 1347
StyI CCWWGG 2 cut(s) 334, 384
TaaI ACNGT 8 cut(s) 548, 779, 875, 887, 1085, 2018, 2066, 2102
TaiI ACGT 2 cut(s) 964, 2252
TaqI TCGA 6 cut(s) 586, 1110, 1644, 1683, 1700, 2068
TatI WGTACW 2 cut(s) 1312, 2018
TauI GCSGC 1 cut(s) 134
TfiI GAWTC 6 cut(s) 619, 1218, 1225, 1288, 1702, 1866
Tru1I TTAA 8 cut(s) 417, 785, 894, 1020, 1121, 1167, 1317, 2048
Tru9I TTAA 8 cut(s) 417, 785, 894, 1020, 1121, 1167, 1317, 2048
TscAI CASTG 3 cut(s) 580, 892, 1462
TseFI GTSAC 4 cut(s) 1370, 1391, 1497, 1563
TseI GCWGC 7 cut(s) 287, 302, 1239, 1476, 1778, 1883, 2105
Tsp45I GTSAC 4 cut(s) 1370, 1391, 1497, 1563
TspDTI ATGAA 9 cut(s) 495, 642, 743, 1086, 1314, 1683, 1756, 2135, 2164
TspGWI ACGGA 1 cut(s) 1379
TspRI CASTG 3 cut(s) 580, 892, 1462
Tth111I GACNNNGTC 1 cut(s) 1661
Van91I CCANNNNNTGG 1 cut(s) 1583
Vha464I CTTAAG 1 cut(s) 1316
VneI GTGCAC 2 cut(s) 636, 1687
VpaK11BI GGWCC 2 cut(s) 1307, 1657
VspI ATTAAT 2 cut(s) 1121, 2048
XagI CCTNNNNNAGG 2 cut(s) 295, 601
XapI RAATTY 5 cut(s) 231, 367, 867, 1301, 1646
XceI RCATGY 1 cut(s) 537
XcmI CCANNNNNNNNNTGG 1 cut(s) 1301
XmiI GTMKAC 1 cut(s) 2068
XmnI GAANNNNTTC 1 cut(s) 2216
XspI CTAG 4 cut(s) 516, 1152, 1182, 1379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.