MD09G1123800.v1.1

Domain of unknown function (DUF3444)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0010314
Physical Location & Seq
Reverse (-)
9569600 .. 9573026
3427 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1123800.v1.1.491

Sequence Viewer

Length: 2112 bp
ATGGAAGTTAACATGGAGGAGGCTCTTAAAGCGAAAGAGATCGCTGAGAAGCGATTTTTTGAGAAAGATTTTGCAGGTGCCATCACTTATGCAGTAAAAGCTAAATCACTGTACCCGGAACTGGAGGGCATATCTCATATGCTGGCCACATTTGATGTTTATGTTGCGTCTGAGGCAAAATATTATGGTGAAATGGATCATTATAAAATTCTTGGACTGAAGCCTTCTGCAAGTAAATATGCAGTGAAGAAGCAGTACAAAAAGATGGCTGTTTTGCTCCACCCTGATAAGAACAAATGTGTGGGAGCTGATGGGGCTTTCAAACTTGTTTCTGAAGCAGTTACTGTGTTGTCCGACACTGCTAAGAAAAGATTGTATGATCTTCAGAGAAATAAACACTTGGCAGCCGCAGTTAATCAGCCCAATTTGTCTTCAGTTCACGCTGGTGGGGTTCCAGGTTTCAACAATTGTTCCAGTTCATCAGCATCTCTTGGTAGGCTTGACACTTTCTGGACCGTCTGCACTTCTTGCAAGGTTCAGTATGAGTATCTCCGTAAGTATGTGAACAAAAGACTTTCATGTAAAAACTGCCGAGGTATTTTCATTGCTGTGGAATCTGGGGCAGCCCCAGCAAATGGTTCTTTTCCTTATACTCCTTCTCCTTGGTCGTATATGCCTAGCAATGGGTATGCGAATCATGGATTTGATGGGGTTACGTATGTTCCAAGCAATGGCACCTTTTTCCCAGGAAACGGGGTCTCAAGTTTGCATTCTGGACATGGGTATGAATATACTTCAAACATGTCGTTTCAGTGGAACTCATATTCTGGAACCTCTGCTGGTGTTGCAGCTCCTCATGGGTCATCAGCTATATCCCCTGGTACTGTTTATCAGTCAAATGGAAATGTTAAGAAAGCTAGAGAGAAGGTGAAATCAAGAGTGAATGGAAAACGTTTCGTTACAACTGCTGTGGCTAAAGTGGAGCTGAACGTGCCTGCTAGCTTTAATGAGCCGCCTGAATCTAAGAGCAATGGACGGGATAAGAAAAGGAAGCTTACTGTGGGAGCGAGTTTTAGAAATGGGCTCGACGAAAAAGTATCAAAATCTGCTTTAGAAGCAAAACTAGCCAATGGAAATGGGAGCATTGGAAATGATCAGAAAATTCCTAGTTCAGGGGAACTTCCAATTAGACGTTGCTCCATGGCACCGGCTTTTGATACTAAGAAGTTATTGCTTGAAAAGGCAAGAACTGAAATTTTGAAGAAATTAGACGAGTTTAAGTTGGCATCAGAAGCGGCAGCTGCTGCTGCTGCTGTAAAGAACACAAAAAGAGAGGCTGAAGTGCGTCAACCAGAAGTTGCACAAGCACATAAATTAGAGATAAAGAATACTGAGCCTCTCTGCATAACTGTCCCTGACCCCGACTTCCATGATTTTGATAAAGATAGGTCAGAAGAATCTTTCAAGCCAAAGCAAATTTGGGCTTTGTATGATGAAGAAGATGGTATGCCTCGCCTGTACTGTCTGATTCGTGAAGTGGTTTCTGTAAAACCATTCAAGTTGGTCATTACTTACTTGAACTCTAAAACTGATAGTGAATTCGGGTTCGTGAACTGGCTAGATTGTGGGTTTACCAAATCCTGTGGAAATTTTAGGGCACGGAATCTTGATGTCATTGAGCAAGTTAACATTTTCTCTCATGTTTTGAGCCGGGAGAAAGCAGGCAGAGGAGGCTGTGTTCGGATATACCCCAGAAGCGGAGACATTTGGGCTATGTATCGAAACTGGTCAAAAAATTGGGACAGATCAACTCCAGGTGAAGTGAGGCACCAGTACGTAATGGTGGAAGTTCTTGATGATTACTCCGAAGATCTTGGTGTCTGTGTATCCCCCCTTGTGAAACTGTCTGGATTCAAGACAGTATACCAAAGCAATACAGACAAAGCAGCCATTCAATGGATTCCAAAAAGAGAGATGCTACGCTTCTCGCACCAGGTGCCATCGTGGCTACTCATGGGAGAACAGAGTAAGCTGCCGGGTAAGTGCTGGGATCTTGATCCAGCTGCAACTCCCGACGAGCTTCTTCACGCTGCAGTGGAACCTGAGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3444 DnaJ

Protein Analysis

704

Amino Acids

77.93

Weight (kDa)

8.99

Isoelectric Point (pI)

38.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 66 - 127 4.4e-19 DnaJ domain
Zn_ribbon_20 PF23551 170 - 204 9.5e-14 Zinc beta-ribbon domain
DUF3444 PF11926 468 - 674 1.8e-74 Domain of unknown function (DUF3444)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010314)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05230 AT2G05250 AT5G35753
fragaria_vesca FvH4_6g40880 FvH4_6g40880
malus_domestica MD09G1123800.v1.1 MD17G1114600.v1.1
prunus_persica Prupe.3G200300_v2.0.a1 Prupe.3G200300_v2.0.a1
pyrus_communis pycom09g04790 pycom17g10590
rosa_chinensis RchiOBHm_Chr2g0156451
rosa_laevigata RLG00000020913
rosa_multiflora Rmu_sc0005392.1_g000017
rosa_roxburghii Rroxscaffold_2G00093030
rosa_rugosa Rorug02G0453200
rosa_samantha Rh2AG519200 Rh2BG531500 Rh2CG504400 Rh2DG540500
rosa_wichuraiana Rw2G042820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 204
AarI CACCTGC 1 cut(s) 65
Acc36I ACCTGC 1 cut(s) 65
AccB1I GGYRCC 5 cut(s) 77, 734, 1204, 1827, 1996
AccB7I CCANNNNNTGG 3 cut(s) 635, 731, 1956
AccI GTMKAC 1 cut(s) 1923
AciI CCGC 4 cut(s) 408, 1013, 1295, 1758
AclI AACGTT 1 cut(s) 952
AclWI GGATC 3 cut(s) 204, 2051, 2058
AcoI YGGCCR 1 cut(s) 144
AcsI RAATTY 6 cut(s) 207, 1161, 1254, 1476, 1598, 1648
AcuI CTGAAG 5 cut(s) 239, 354, 368, 417, 1359
AdeI CACNNNGTG 1 cut(s) 1996
AfaI GTAC 5 cut(s) 113, 257, 883, 1520, 1835
AfiI CCNNNNNNNGG 8 cut(s) 121, 635, 683, 731, 752, 1172, 1757, 1956
AflIII ACRYGT 1 cut(s) 801
AjnI CCWGG 5 cut(s) 454, 745, 877, 1813, 1992
AleI CACNNNNGTG 1 cut(s) 444
AloI GAACNNNNNNTCC 2 cut(s) 1722, 1754
Alw26I GTCTC 2 cut(s) 763, 1755
AlwI GGATC 3 cut(s) 204, 2051, 2058
AlwNI CAGNNNCTG 2 cut(s) 344, 1304
AoxI GGCC 1 cut(s) 144
ApoI RAATTY 6 cut(s) 207, 1161, 1254, 1476, 1598, 1648
AspS9I GGNCC 1 cut(s) 513
AsuC2I CCSGG 3 cut(s) 116, 1712, 2037
AsuHPI GGTGA 3 cut(s) 200, 940, 1829
AsuNHI GCTAGC 1 cut(s) 998
AvaII GGWCC 1 cut(s) 513
AxyI CCTNAGG 1 cut(s) 2103
BaeGI GKGCMC 1 cut(s) 1660
BalI TGGCCA 1 cut(s) 146
BanI GGYRCC 5 cut(s) 77, 734, 1204, 1827, 1996
BanII GRGCYC 1 cut(s) 1086
BarI GAAGNNNNNNTAC 2 cut(s) 239, 271
BbsI GAAGAC 1 cut(s) 423
BccI CCATC 6 cut(s) 89, 259, 305, 701, 1496, 2008
BciT130I CCWGG 5 cut(s) 456, 747, 879, 1815, 1994
BciVI GTATCC 1 cut(s) 1897
BclI TGATCA 1 cut(s) 1153
BcnI CCSGG 3 cut(s) 116, 1712, 2037
BcoDI GTCTC 2 cut(s) 763, 1755
BfaI CTAG 6 cut(s) 678, 918, 999, 1124, 1167, 1619
BfmI CTRYAG 1 cut(s) 2091
BfuAI ACCTGC 1 cut(s) 65
BfuI GTATCC 1 cut(s) 1897
BglI GCCNNNNNGGC 1 cut(s) 2005
BglII AGATCT 1 cut(s) 1870
Bme1390I CCNGG 8 cut(s) 116, 456, 747, 879, 1712, 1815, 1994, 2037
Bme18I GGWCC 1 cut(s) 513
BmgT120I GGNCC 1 cut(s) 513
BmiI GGNNCC 8 cut(s) 79, 453, 736, 832, 1206, 1829, 1998, 2100
BmrFI CCNGG 8 cut(s) 116, 456, 747, 879, 1712, 1815, 1994, 2037
BmsI GCATC 3 cut(s) 494, 1295, 1965
BmtI GCTAGC 1 cut(s) 1002
BpiI GAAGAC 1 cut(s) 423
BpmI CTGGAG 2 cut(s) 143, 1797
BpuEI CTTGAG 1 cut(s) 745
BpuMI CCSGG 3 cut(s) 116, 1712, 2037
BsaAI YACGTR 2 cut(s) 717, 1837
BsaBI GATNNNNATC 1 cut(s) 2055
BsaI GGTCTC 1 cut(s) 763
BsaJI CCNNGG 5 cut(s) 592, 662, 745, 877, 1200
BsaXI ACNNNNNCTCC 4 cut(s) 643, 673, 1722, 1752
Bsc4I CCNNNNNNNGG 8 cut(s) 121, 635, 683, 731, 752, 1172, 1757, 1956
Bse118I RCCGGY 1 cut(s) 1207
Bse1I ACTGG 5 cut(s) 126, 474, 1619, 1790, 1831
Bse21I CCTNAGG 1 cut(s) 2103
Bse3DI GCAATG 4 cut(s) 603, 688, 736, 1036
Bse8I GATNNNNATC 1 cut(s) 2055
BseBI CCWGG 5 cut(s) 456, 747, 879, 1815, 1994
BseDI CCNNGG 5 cut(s) 592, 662, 745, 877, 1200
BseJI GATNNNNATC 1 cut(s) 2055
BseLI CCNNNNNNNGG 8 cut(s) 121, 635, 683, 731, 752, 1172, 1757, 1956
BseMI GCAATG 4 cut(s) 603, 688, 736, 1036
BseMII CTCAG 4 cut(s) 36, 162, 1383, 2094
BseNI ACTGG 5 cut(s) 126, 474, 1619, 1790, 1831
BseRI GAGGAG 3 cut(s) 32, 843, 1743
BseSI GKGCMC 1 cut(s) 1660
BseYI CCCAGC 2 cut(s) 628, 2046
BsgI GTGCAG 1 cut(s) 505
BshFI GGCC 1 cut(s) 146
BshNI GGYRCC 5 cut(s) 77, 734, 1204, 1827, 1996
BsiSI CCGG 4 cut(s) 116, 1208, 1711, 2036
BslFI GGGAC 2 cut(s) 1397, 1814
BslI CCNNNNNNNGG 8 cut(s) 121, 635, 683, 731, 752, 1172, 1757, 1956
BsmAI GTCTC 2 cut(s) 763, 1755
BsmFI GGGAC 2 cut(s) 1397, 1814
BsmI GAATGC 1 cut(s) 769
BsnI GGCC 1 cut(s) 146
Bso31I GGTCTC 1 cut(s) 763
Bsp1286I GDGCHC 2 cut(s) 1086, 1660
Bsp143I GATC 8 cut(s) 39, 196, 379, 1153, 1805, 1870, 2050, 2056
Bsp19I CCATGG 1 cut(s) 1200
BspACI CCGC 4 cut(s) 408, 1013, 1295, 1758
BspANI GGCC 1 cut(s) 146
BspCNI CTCAG 4 cut(s) 37, 163, 1384, 2095
BspLI GGNNCC 8 cut(s) 79, 453, 736, 832, 1206, 1829, 1998, 2100
BspMAI CTGCAG 1 cut(s) 2095
BspMI ACCTGC 1 cut(s) 65
BspOI GCTAGC 1 cut(s) 1002
BspPI GGATC 3 cut(s) 204, 2051, 2058
BspT107I GGYRCC 5 cut(s) 77, 734, 1204, 1827, 1996
BspTNI GGTCTC 1 cut(s) 763
BsrDI GCAATG 4 cut(s) 603, 688, 736, 1036
BsrFI RCCGGY 1 cut(s) 1207
BsrI ACTGG 5 cut(s) 126, 474, 1619, 1790, 1831
BssAI RCCGGY 1 cut(s) 1207
BssECI CCNNGG 5 cut(s) 592, 662, 745, 877, 1200
BssMI GATC 8 cut(s) 39, 196, 379, 1153, 1805, 1870, 2050, 2056
BssNAI GTATAC 1 cut(s) 1924
BssT1I CCWWGG 2 cut(s) 662, 1200
Bst1107I GTATAC 1 cut(s) 1924
Bst2UI CCWGG 5 cut(s) 456, 747, 879, 1815, 1994
Bst4CI ACNGT 9 cut(s) 111, 346, 517, 886, 1060, 1411, 1523, 1905, 1921
BstAPI GCANNNNNTGC 3 cut(s) 528, 1304, 1996
BstBAI YACGTR 2 cut(s) 717, 1837
BstC8I GCNNGC 4 cut(s) 144, 996, 1000, 1723
BstDEI CTNAG 7 cut(s) 45, 171, 363, 1023, 1221, 1392, 2103
BstDSI CCRYGG 1 cut(s) 1200
BstENI CCTNNNNNAGG 1 cut(s) 1170
BstKTI GATC 8 cut(s) 42, 199, 382, 1156, 1808, 1873, 2053, 2059
BstMAI GTCTC 2 cut(s) 763, 1755
BstMBI GATC 8 cut(s) 39, 196, 379, 1153, 1805, 1870, 2050, 2056
BstNI CCWGG 5 cut(s) 456, 747, 879, 1815, 1994
BstNSI RCATGY 1 cut(s) 805
BstSCI CCNGG 8 cut(s) 114, 454, 745, 877, 1710, 1813, 1992, 2035
BstSFI CTRYAG 1 cut(s) 2091
BstSLI GKGCMC 1 cut(s) 1660
BstSNI TACGTA 2 cut(s) 717, 1837
BstV2I GAAGAC 1 cut(s) 423
BstX2I RGATCY 2 cut(s) 1870, 2050
BstYI RGATCY 2 cut(s) 1870, 2050
BstZ17I GTATAC 1 cut(s) 1924
Bsu36I CCTNAGG 1 cut(s) 2103
BsuI GTATCC 1 cut(s) 1897
BsuRI GGCC 1 cut(s) 146
BtgI CCRYGG 1 cut(s) 1200
BtsI GCAGTG 3 cut(s) 249, 357, 2100
BtsIMutI CAGTG 5 cut(s) 107, 249, 357, 818, 2100
BveI ACCTGC 1 cut(s) 65
Cac8I GCNNGC 4 cut(s) 144, 996, 1000, 1723
CaiI CAGNNNCTG 2 cut(s) 344, 1304
Cfr10I RCCGGY 1 cut(s) 1207
Cfr13I GGNCC 1 cut(s) 513
CseI GACGC 2 cut(s) 156, 1334
CsiI ACCWGGT 1 cut(s) 1992
Csp6I GTAC 5 cut(s) 112, 256, 882, 1519, 1834
CspCI CAANNNNNGTGG 4 cut(s) 951, 986, 1624, 1659
CviQI GTAC 5 cut(s) 112, 256, 882, 1519, 1834
DdeI CTNAG 7 cut(s) 45, 171, 363, 1023, 1221, 1392, 2103
DpnI GATC 8 cut(s) 41, 198, 381, 1155, 1807, 1872, 2052, 2058
DpnII GATC 8 cut(s) 39, 196, 379, 1153, 1805, 1870, 2050, 2056
DraIII CACNNNGTG 1 cut(s) 1996
EaeI YGGCCR 1 cut(s) 144
Eco105I TACGTA 2 cut(s) 717, 1837
Eco130I CCWWGG 2 cut(s) 662, 1200
Eco24I GRGCYC 1 cut(s) 1086
Eco31I GGTCTC 1 cut(s) 763
Eco47I GGWCC 1 cut(s) 513
Eco57I CTGAAG 5 cut(s) 239, 354, 368, 417, 1359
Eco81I CCTNAGG 1 cut(s) 2103
EcoNI CCTNNNNNAGG 1 cut(s) 1170
EcoRI GAATTC 1 cut(s) 1598
EcoRII CCWGG 5 cut(s) 454, 745, 877, 1813, 1992
EcoT14I CCWWGG 2 cut(s) 662, 1200
EcoT38I GRGCYC 1 cut(s) 1086
ErhI CCWWGG 2 cut(s) 662, 1200
FaqI GGGAC 2 cut(s) 1397, 1814
FauNDI CATATG 1 cut(s) 138
FbaI TGATCA 1 cut(s) 1153
FblI GTMKAC 1 cut(s) 1923
FriOI GRGCYC 1 cut(s) 1086
FspBI CTAG 6 cut(s) 678, 918, 999, 1124, 1167, 1619
GsaI CCCAGC 2 cut(s) 632, 2050
GsuI CTGGAG 2 cut(s) 143, 1797
HaeIII GGCC 1 cut(s) 146
HapII CCGG 4 cut(s) 116, 1208, 1711, 2036
HgaI GACGC 2 cut(s) 156, 1334
HincII GTYRAC 3 cut(s) 10, 1349, 1687
HindII GTYRAC 3 cut(s) 10, 1349, 1687
HindIII AAGCTT 1 cut(s) 1052
HinfI GANTC 8 cut(s) 614, 694, 1019, 1457, 1528, 1663, 1911, 1960
HpaI GTTAAC 2 cut(s) 10, 1687
HpaII CCGG 4 cut(s) 116, 1208, 1711, 2036
HphI GGTGA 3 cut(s) 200, 940, 1829
Hpy166II GTNNAC 8 cut(s) 10, 439, 565, 1349, 1612, 1632, 1687, 1924
Hpy8I GTNNAC 8 cut(s) 10, 439, 565, 1349, 1612, 1632, 1687, 1924
Hpy99I CGWCG 2 cut(s) 1091, 2078
HpyAV CCTTC 3 cut(s) 234, 666, 919
HpyCH4III ACNGT 9 cut(s) 111, 346, 517, 886, 1060, 1411, 1523, 1905, 1921
HpyCH4IV ACGT 5 cut(s) 716, 952, 990, 1192, 1836
HpyF3I CTNAG 7 cut(s) 45, 171, 363, 1023, 1221, 1392, 2103
HpySE526I ACGT 5 cut(s) 716, 952, 990, 1192, 1836
Ksp22I TGATCA 1 cut(s) 1153
KspAI GTTAAC 2 cut(s) 10, 1687
Kzo9I GATC 8 cut(s) 39, 196, 379, 1153, 1805, 1870, 2050, 2056
LmnI GCTCC 7 cut(s) 282, 305, 856, 982, 1064, 1140, 1202
LweI GCATC 3 cut(s) 494, 1295, 1965
MabI ACCWGGT 1 cut(s) 1992
MaeI CTAG 6 cut(s) 678, 918, 999, 1124, 1167, 1619
MaeII ACGT 5 cut(s) 716, 952, 990, 1192, 1836
MaeIII GTNAC 3 cut(s) 340, 712, 958
MalI GATC 8 cut(s) 41, 198, 381, 1155, 1807, 1872, 2052, 2058
MboI GATC 8 cut(s) 39, 196, 379, 1153, 1805, 1870, 2050, 2056
MboII GAAGA 9 cut(s) 259, 374, 423, 1273, 1466, 1508, 1511, 1880, 2075
MfeI CAATTG 1 cut(s) 466
MflI RGATCY 2 cut(s) 1870, 2050
MhlI GDGCHC 2 cut(s) 1086, 1660
MlsI TGGCCA 1 cut(s) 146
MluNI TGGCCA 1 cut(s) 146
MmeI TCCRAC 1 cut(s) 378
Mox20I TGGCCA 1 cut(s) 146
MscI TGGCCA 1 cut(s) 146
MseI TTAA 8 cut(s) 9, 27, 414, 909, 1005, 1278, 1686, 2110
MslI CAYNNNNRTG 3 cut(s) 444, 608, 783
Msp20I TGGCCA 1 cut(s) 146
MspA1I CMGCKG 2 cut(s) 1301, 2063
MspI CCGG 4 cut(s) 116, 1208, 1711, 2036
MspR9I CCNGG 8 cut(s) 116, 456, 747, 879, 1712, 1815, 1994, 2037
MunI CAATTG 1 cut(s) 466
Mva1269I GAATGC 1 cut(s) 769
MvaI CCWGG 5 cut(s) 456, 747, 879, 1815, 1994
NciI CCSGG 3 cut(s) 116, 1712, 2037
NcoI CCATGG 1 cut(s) 1200
NdeI CATATG 1 cut(s) 138
NdeII GATC 8 cut(s) 39, 196, 379, 1153, 1805, 1870, 2050, 2056
NheI GCTAGC 1 cut(s) 998
NlaIV GGNNCC 8 cut(s) 79, 453, 736, 832, 1206, 1829, 1998, 2100
NmeAIII GCCGAG 1 cut(s) 617
NspI RCATGY 1 cut(s) 805
OliI CACNNNNGTG 1 cut(s) 444
PaqCI CACCTGC 1 cut(s) 65
PciI ACATGT 1 cut(s) 801
PctI GAATGC 1 cut(s) 769
PfeI GAWTC 8 cut(s) 614, 694, 1019, 1457, 1528, 1663, 1911, 1960
PflMI CCANNNNNTGG 3 cut(s) 635, 731, 1956
Ppu21I YACGTR 2 cut(s) 717, 1837
PscI ACATGT 1 cut(s) 801
PsiI TTATAA 1 cut(s) 204
Psp1406I AACGTT 1 cut(s) 952
Psp6I CCWGG 5 cut(s) 454, 745, 877, 1813, 1992
PspFI CCCAGC 2 cut(s) 628, 2046
PspGI CCWGG 5 cut(s) 454, 745, 877, 1813, 1992
PspN4I GGNNCC 8 cut(s) 79, 453, 736, 832, 1206, 1829, 1998, 2100
PspPI GGNCC 1 cut(s) 513
PstI CTGCAG 1 cut(s) 2095
PstNI CAGNNNCTG 2 cut(s) 344, 1304
PsuI RGATCY 2 cut(s) 1870, 2050
PvuII CAGCTG 2 cut(s) 1301, 2063
RsaI GTAC 5 cut(s) 113, 257, 883, 1520, 1835
RsaNI GTAC 5 cut(s) 112, 256, 882, 1519, 1834
RseI CAYNNNNRTG 3 cut(s) 444, 608, 783
SaqAI TTAA 8 cut(s) 9, 27, 414, 909, 1005, 1278, 1686, 2110
Sau3AI GATC 8 cut(s) 39, 196, 379, 1153, 1805, 1870, 2050, 2056
Sau96I GGNCC 1 cut(s) 513
ScrFI CCNGG 8 cut(s) 116, 456, 747, 879, 1712, 1815, 1994, 2037
SduI GDGCHC 2 cut(s) 1086, 1660
SexAI ACCWGGT 1 cut(s) 1992
SfaNI GCATC 3 cut(s) 494, 1295, 1965
SfcI CTRYAG 1 cut(s) 2091
SinI GGWCC 1 cut(s) 513
SmiMI CAYNNNNRTG 3 cut(s) 444, 608, 783
SmlI CTYRAG 1 cut(s) 760
SmoI CTYRAG 1 cut(s) 760
SnaBI TACGTA 2 cut(s) 717, 1837
SsiI CCGC 4 cut(s) 408, 1013, 1295, 1758
SspI AATATT 1 cut(s) 182
SspMI CTAG 6 cut(s) 678, 918, 999, 1124, 1167, 1619
StyD4I CCNGG 8 cut(s) 114, 454, 745, 877, 1710, 1813, 1992, 2035
StyI CCWWGG 2 cut(s) 662, 1200
TaaI ACNGT 9 cut(s) 111, 346, 517, 886, 1060, 1411, 1523, 1905, 1921
TaiI ACGT 5 cut(s) 719, 955, 993, 1195, 1839
TaqI TCGA 2 cut(s) 1086, 1780
TatI WGTACW 2 cut(s) 255, 1518
TauI GCSGC 3 cut(s) 410, 1015, 1298
TfiI GAWTC 8 cut(s) 614, 694, 1019, 1457, 1528, 1663, 1911, 1960
Tru1I TTAA 8 cut(s) 9, 27, 414, 909, 1005, 1278, 1686, 2110
Tru9I TTAA 8 cut(s) 9, 27, 414, 909, 1005, 1278, 1686, 2110
TscAI CASTG 5 cut(s) 114, 249, 364, 818, 2100
TspDTI ATGAA 5 cut(s) 468, 567, 592, 801, 1509
TspGWI ACGGA 2 cut(s) 542, 1675
TspRI CASTG 5 cut(s) 114, 249, 364, 818, 2100
Van91I CCANNNNNTGG 3 cut(s) 635, 731, 1956
VpaK11BI GGWCC 1 cut(s) 513
XagI CCTNNNNNAGG 1 cut(s) 1170
XapI RAATTY 6 cut(s) 207, 1161, 1254, 1476, 1598, 1648
XceI RCATGY 1 cut(s) 805
XcmI CCANNNNNNNNNTGG 1 cut(s) 1476
XmiI GTMKAC 1 cut(s) 1923
XspI CTAG 6 cut(s) 678, 918, 999, 1124, 1167, 1619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.