pycom09g04790

Domain of unknown function (DUF3444)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0010314
Physical Location & Seq
Reverse (-)
3534939 .. 3539526
4588 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g04790.2

Sequence Viewer

Length: 2190 bp
ATGGAAGTTAACATAGAGGAGGCTCTTAAAGCGAAAGAGATCGCCGAGAAGCGATTTTTTGAGAAAGATTTTGCAGGTGCCATCACTTATGCAGTAAAAGCTAAATCACTGTACCCGGAACTGGAGGGCATATCTCATATGCTGGCCACATTTGATGTTTATGTTGCGTCTGAGGCAAAATATTATGGTGAAATGGATCATTATAAAATTCTTGGACTGAAGCCTTCTGCAAGTAAATATGCAGTGAAGAAGCAGTACAAAAAGATGGCTGTGCTGCTCCACCCTGATAAGAACAAATGTGTGGGAGCTGATGGGGCTTTCAAACTTGTTTCTGAAGCAGTTACTGTGTTGTCCGACACTGCTAAGAAAAGATTGTATGATCTTCAGAGAAATAAACACTTGGCAGCTGCAGTTAATCAGCCCAATTTGTCTTCAGTTCACGCTGGTGGGGTTCCAGGTTTCAACAATTGTTCCAGTTCATCAGTATCTCATGGTAGACTCGACACTTTCTGGACCGTCTGCACTTCGTGCAAGGTTCAGTATGAGTATCTCCGTAAGTATGTGAACAAAAGACTTTCATGTAAAAACTGCCGAGGTATTTTCATTGCTGTGGAATCTGGGGCAGCCCCAGCAAATGGTTCTTTTCCTTATACTCCTTGTCCTTGGTCGTATATGCCTAGTAATGGGTATGCGAATCATGGATTTGATGGGGTTACGTATGTTCCAAGCAACGGTACCTTTTTCCCAGGAAATGGGGTCTCAAGTTTGCATTCTGGACATGGGTATGAATATACTTCAAACATGTCGTTTCAGTGGAACTCATATTCTGGAACCTCTGCTGGTGTTGCAGCTCCTCATGGGTCATCAGCTACATCCCCTGGTACTGTTTGTCAGTCAAATGGAAATGTTAAGAAAGCTAGAGAGAAGGTGAAATCAAGAGTGAATGGAAAACGTTCTGTTACAACTGCTGTGGCTAAAGTGGAGCTGAACGTGCCTGCTAGCTTTAATGAGCCGCCTGAATCTAAGAGCAATGGACGGGATAAGAAAAGGAAACTTACTGTGGGAGCGAGTTTTAGAAATGGGCTCGACGAAAAAGTATCAAAATCTGCTTTAGAAGCAAAACTAGCCAATGGAAATGGGAGTGTTGGAAATGATCAGAAAATTCCTAGTTCAGGGGAACTTCCAATTAGACGTTGCTCCATGGCACCGGCTTTTGATACTAAGAGGTTGTTGCTTGAAAAGGCAAGAACTGAAATTTTGAAGAAATTAGACGAGTTTAAGTTGGCATCAGAAGTGGCAGCTGCCGCTGTTGCTGTAAAGAACACAAAAAGAGAGGCTGCAGTGGGTCAACCAGAAGTTGCACAAGCACATAAATTAGAGACAAAGAATACTGAGCCTCTCTGCATAACTGTCCCAGACCCCGACTTCCATGATTTTGATAAAGATAGGTCAGAAGAATCTTTCAAGCCAAAGCAAATTTGGGCTTTGTATGATGAAGAAGATGGTATGCCTCGCCTGTACTGCCTGATTCGTGAAGTGGTTTCTGTAAAACCATTCAAGTTAGTCATTACTTACTTGAACTCTAAAACTGATAGTGAATTCGGGTTCGTGAACTGGCTAGATTGTGGGTTTACCAAATCCTGTGGAAATTTTAGGGCACGGAATCTTGATGTCATTGAGCAAGTTAACATTTTCTCTCATGTTTTGAGCCGGGAGAAAGCAGGCAGAGGAGGCTGTGTTCGGATATACCCCAGAAGCGGAGACATTTGGGCTATGTGCCATCATGGCTACTCATGGGAGAAGAGAGTAAGCTGCCGGGTAAGTGCTGGGATCTTGATCCAGCTGCAACTCCTGACGAGCTTCTTCACGCCGCGGTGGAACCCGAGGCTTAAGCGCGACATGCTAAAAGCAGGGAAGCAAGAGTTGCTCGGGAGTTGTTACGTTCTAGCATTCTTTAGACAACATGTTTGGCAGACGGCGTCTCTGTACCATTTGGTTCACACAGCAGCTCTGCTTGCTGCCCCCATCACGAAACACCCCACCATTTTTGGATGCCTTTTGACTACTGGAATACTCGCATTCTCCGGGACGTGTTATACTGTGGCATTACTTGAGGATAGAAACTACTCGACATTGGCTCCTTTCGGTGGCTTTGCTTTCATCGCTGCTTGGGGTAGCTTGCTGTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3444 DnaJ

Protein Analysis

730

Amino Acids

80.36

Weight (kDa)

9.26

Isoelectric Point (pI)

38.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010314)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05230 AT2G05250 AT5G35753
fragaria_vesca FvH4_6g40880 FvH4_6g40880
malus_domestica MD09G1123800.v1.1 MD17G1114600.v1.1
prunus_persica Prupe.3G200300_v2.0.a1 Prupe.3G200300_v2.0.a1
pyrus_communis pycom09g04790 pycom17g10590
rosa_chinensis RchiOBHm_Chr2g0156451
rosa_laevigata RLG00000020913
rosa_multiflora Rmu_sc0005392.1_g000017
rosa_roxburghii Rroxscaffold_2G00093030
rosa_rugosa Rorug02G0453200
rosa_samantha Rh2AG519200 Rh2BG531500 Rh2CG504400 Rh2DG540500
rosa_wichuraiana Rw2G042820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 204
AarI CACCTGC 1 cut(s) 65
Acc36I ACCTGC 1 cut(s) 65
Acc65I GGTACC 1 cut(s) 734
AccB1I GGYRCC 3 cut(s) 77, 734, 1204
AccB7I CCANNNNNTGG 2 cut(s) 635, 752
AccI GTMKAC 1 cut(s) 496
AccII CGCG 2 cut(s) 1873, 1896
AciI CCGC 5 cut(s) 1013, 1305, 1758, 1871, 1873
AclI AACGTT 1 cut(s) 952
AclWI GGATC 3 cut(s) 204, 1831, 1838
AcoI YGGCCR 1 cut(s) 144
AcsI RAATTY 6 cut(s) 207, 1161, 1254, 1476, 1598, 1648
AcuI CTGAAG 4 cut(s) 239, 354, 368, 417
AcyI GRCGYC 1 cut(s) 1979
AdeI CACNNNGTG 1 cut(s) 528
AfaI GTAC 6 cut(s) 113, 257, 736, 883, 1520, 1988
AfiI CCNNNNNNNGG 8 cut(s) 121, 635, 683, 731, 752, 1172, 1757, 2147
AflII CTTAAG 1 cut(s) 1889
AflIII ACRYGT 3 cut(s) 801, 1963, 2090
AgsI TTSAA 8 cut(s) 322, 463, 798, 1238, 1261, 1465, 1558, 1579
AjiI CACGTC 1 cut(s) 2091
AjnI CCWGG 3 cut(s) 454, 745, 877
AleI CACNNNNGTG 1 cut(s) 444
AloI GAACNNNNNNTCC 2 cut(s) 1722, 1754
Alw26I GTCTC 4 cut(s) 763, 1373, 1755, 1986
AlwI GGATC 3 cut(s) 204, 1831, 1838
AlwNI CAGNNNCTG 1 cut(s) 344
Ama87I CYCGRG 2 cut(s) 1882, 1928
AoxI GGCC 1 cut(s) 144
ApoI RAATTY 6 cut(s) 207, 1161, 1254, 1476, 1598, 1648
ArsI GACNNNNNNTTYG 2 cut(s) 1950, 1982
Asp700I GAANNNNTTC 1 cut(s) 952
Asp718I GGTACC 1 cut(s) 734
AspLEI GCGC 1 cut(s) 1896
AspS9I GGNCC 1 cut(s) 513
AsuC2I CCSGG 4 cut(s) 116, 1712, 1817, 2086
AsuHPI GGTGA 2 cut(s) 200, 940
AsuNHI GCTAGC 1 cut(s) 998
AvaI CYCGRG 2 cut(s) 1882, 1928
AvaII GGWCC 1 cut(s) 513
BaeGI GKGCMC 1 cut(s) 1660
BalI TGGCCA 1 cut(s) 146
BanI GGYRCC 3 cut(s) 77, 734, 1204
BanII GRGCYC 1 cut(s) 1086
BarI GAAGNNNNNNTAC 2 cut(s) 239, 271
BbsI GAAGAC 1 cut(s) 423
BccI CCATC 7 cut(s) 89, 259, 305, 701, 1496, 1788, 2033
BceAI ACGGC 1 cut(s) 1992
BciT130I CCWGG 3 cut(s) 456, 747, 879
BclI TGATCA 1 cut(s) 1153
BcnI CCSGG 4 cut(s) 116, 1712, 1817, 2086
BcoDI GTCTC 4 cut(s) 763, 1373, 1755, 1986
BfaI CTAG 7 cut(s) 678, 918, 999, 1124, 1167, 1619, 1946
BfmI CTRYAG 2 cut(s) 408, 1338
BfrI CTTAAG 1 cut(s) 1889
BfuAI ACCTGC 1 cut(s) 65
BglI GCCNNNNNGGC 1 cut(s) 1785
Bme1390I CCNGG 7 cut(s) 116, 456, 747, 879, 1712, 1817, 2086
Bme18I GGWCC 1 cut(s) 513
BmeT110I CYCGRG 2 cut(s) 1882, 1928
BmgBI CACGTC 1 cut(s) 2091
BmgT120I GGNCC 1 cut(s) 513
BmiI GGNNCC 7 cut(s) 79, 453, 736, 832, 1206, 1880, 2139
BmrFI CCNGG 7 cut(s) 116, 456, 747, 879, 1712, 1817, 2086
BmsI GCATC 2 cut(s) 1295, 2042
BmtI GCTAGC 1 cut(s) 1002
BpiI GAAGAC 1 cut(s) 423
BpmI CTGGAG 1 cut(s) 143
BpuEI CTTGAG 2 cut(s) 745, 2132
BpuMI CCSGG 4 cut(s) 116, 1712, 1817, 2086
BsaAI YACGTR 1 cut(s) 717
BsaBI GATNNNNATC 1 cut(s) 1835
BsaHI GRCGYC 1 cut(s) 1979
BsaI GGTCTC 1 cut(s) 763
BsaJI CCNNGG 7 cut(s) 592, 662, 745, 877, 1200, 1871, 1883
BsaXI ACNNNNNCTCC 4 cut(s) 1722, 1752, 2122, 2152
Bsc4I CCNNNNNNNGG 8 cut(s) 121, 635, 683, 731, 752, 1172, 1757, 2147
Bse118I RCCGGY 1 cut(s) 1207
Bse1I ACTGG 4 cut(s) 126, 474, 1619, 2071
Bse3DI GCAATG 2 cut(s) 603, 1036
Bse8I GATNNNNATC 1 cut(s) 1835
BseBI CCWGG 3 cut(s) 456, 747, 879
BseDI CCNNGG 7 cut(s) 592, 662, 745, 877, 1200, 1871, 1883
BseGI GGATG 2 cut(s) 872, 2057
BseJI GATNNNNATC 1 cut(s) 1835
BseLI CCNNNNNNNGG 8 cut(s) 121, 635, 683, 731, 752, 1172, 1757, 2147
BseMI GCAATG 2 cut(s) 603, 1036
BseMII CTCAG 2 cut(s) 162, 1383
BseNI ACTGG 4 cut(s) 126, 474, 1619, 2071
BseRI GAGGAG 3 cut(s) 32, 843, 1743
BseSI GKGCMC 1 cut(s) 1660
BseYI CCCAGC 2 cut(s) 628, 1826
BsgI GTGCAG 1 cut(s) 505
Bsh1236I CGCG 2 cut(s) 1873, 1896
BshFI GGCC 1 cut(s) 146
BshNI GGYRCC 3 cut(s) 77, 734, 1204
BsiHKCI CYCGRG 2 cut(s) 1882, 1928
BsiSI CCGG 5 cut(s) 116, 1208, 1711, 1816, 2085
BslFI GGGAC 2 cut(s) 1397, 2101
BslI CCNNNNNNNGG 8 cut(s) 121, 635, 683, 731, 752, 1172, 1757, 2147
BsmAI GTCTC 4 cut(s) 763, 1373, 1755, 1986
BsmBI CGTCTC 1 cut(s) 1986
BsmFI GGGAC 2 cut(s) 1397, 2101
BsmI GAATGC 3 cut(s) 769, 1949, 2078
BsnI GGCC 1 cut(s) 146
Bso31I GGTCTC 1 cut(s) 763
BsoBI CYCGRG 2 cut(s) 1882, 1928
Bsp1286I GDGCHC 2 cut(s) 1086, 1660
Bsp143I GATC 6 cut(s) 39, 196, 379, 1153, 1830, 1836
Bsp19I CCATGG 1 cut(s) 1200
BspACI CCGC 5 cut(s) 1013, 1305, 1758, 1871, 1873
BspANI GGCC 1 cut(s) 146
BspCNI CTCAG 2 cut(s) 163, 1384
BspFNI CGCG 2 cut(s) 1873, 1896
BspLI GGNNCC 7 cut(s) 79, 453, 736, 832, 1206, 1880, 2139
BspMAI CTGCAG 2 cut(s) 412, 1342
BspMI ACCTGC 1 cut(s) 65
BspOI GCTAGC 1 cut(s) 1002
BspPI GGATC 3 cut(s) 204, 1831, 1838
BspT107I GGYRCC 3 cut(s) 77, 734, 1204
BspTI CTTAAG 1 cut(s) 1889
BspTNI GGTCTC 1 cut(s) 763
BsrDI GCAATG 2 cut(s) 603, 1036
BsrFI RCCGGY 1 cut(s) 1207
BsrI ACTGG 4 cut(s) 126, 474, 1619, 2071
BssAI RCCGGY 1 cut(s) 1207
BssECI CCNNGG 7 cut(s) 592, 662, 745, 877, 1200, 1871, 1883
BssMI GATC 6 cut(s) 39, 196, 379, 1153, 1830, 1836
BssNI GRCGYC 1 cut(s) 1979
BssT1I CCWWGG 2 cut(s) 662, 1200
Bst2UI CCWGG 3 cut(s) 456, 747, 879
Bst4CI ACNGT 8 cut(s) 111, 346, 517, 734, 886, 1060, 1411, 2101
Bst6I CTCTTC 1 cut(s) 1796
BstACI GRCGYC 1 cut(s) 1979
BstAFI CTTAAG 1 cut(s) 1889
BstAPI GCANNNNNTGC 2 cut(s) 528, 1924
BstBAI YACGTR 1 cut(s) 717
BstC8I GCNNGC 6 cut(s) 144, 996, 1000, 1723, 2016, 2180
BstDEI CTNAG 5 cut(s) 171, 363, 1023, 1221, 1392
BstDSI CCRYGG 2 cut(s) 1200, 1871
BstENI CCTNNNNNAGG 1 cut(s) 1170
BstF5I GGATG 2 cut(s) 872, 2057
BstFNI CGCG 2 cut(s) 1873, 1896
BstHHI GCGC 1 cut(s) 1896
BstKTI GATC 6 cut(s) 42, 199, 382, 1156, 1833, 1839
BstMAI GTCTC 4 cut(s) 763, 1373, 1755, 1986
BstMBI GATC 6 cut(s) 39, 196, 379, 1153, 1830, 1836
BstNI CCWGG 3 cut(s) 456, 747, 879
BstNSI RCATGY 3 cut(s) 805, 1903, 1967
BstSCI CCNGG 7 cut(s) 114, 454, 745, 877, 1710, 1815, 2084
BstSFI CTRYAG 2 cut(s) 408, 1338
BstSLI GKGCMC 1 cut(s) 1660
BstSNI TACGTA 1 cut(s) 717
BstUI CGCG 2 cut(s) 1873, 1896
BstV2I GAAGAC 1 cut(s) 423
BstX2I RGATCY 1 cut(s) 1830
BstYI RGATCY 1 cut(s) 1830
BsuRI GGCC 1 cut(s) 146
BtgI CCRYGG 2 cut(s) 1200, 1871
BtgZI GCGATG 1 cut(s) 2146
BtrI CACGTC 1 cut(s) 2091
BtsCI GGATG 2 cut(s) 872, 2057
BtsI GCAGTG 3 cut(s) 249, 357, 1347
BtsIMutI CAGTG 5 cut(s) 107, 249, 357, 818, 1347
BveI ACCTGC 1 cut(s) 65
Cac8I GCNNGC 6 cut(s) 144, 996, 1000, 1723, 2016, 2180
CaiI CAGNNNCTG 1 cut(s) 344
CfoI GCGC 1 cut(s) 1896
Cfr10I RCCGGY 1 cut(s) 1207
Cfr13I GGNCC 1 cut(s) 513
Cfr42I CCGCGG 1 cut(s) 1874
CseI GACGC 2 cut(s) 156, 1968
Csp6I GTAC 6 cut(s) 112, 256, 735, 882, 1519, 1987
CspCI CAANNNNNGTGG 6 cut(s) 951, 986, 1624, 1659, 2029, 2064
CviQI GTAC 6 cut(s) 112, 256, 735, 882, 1519, 1987
DdeI CTNAG 5 cut(s) 171, 363, 1023, 1221, 1392
DpnI GATC 6 cut(s) 41, 198, 381, 1155, 1832, 1838
DpnII GATC 6 cut(s) 39, 196, 379, 1153, 1830, 1836
DraIII CACNNNGTG 1 cut(s) 528
EaeI YGGCCR 1 cut(s) 144
Eam1104I CTCTTC 1 cut(s) 1796
EarI CTCTTC 1 cut(s) 1796
Eco105I TACGTA 1 cut(s) 717
Eco130I CCWWGG 2 cut(s) 662, 1200
Eco24I GRGCYC 1 cut(s) 1086
Eco31I GGTCTC 1 cut(s) 763
Eco47I GGWCC 1 cut(s) 513
Eco57I CTGAAG 4 cut(s) 239, 354, 368, 417
Eco88I CYCGRG 2 cut(s) 1882, 1928
EcoNI CCTNNNNNAGG 1 cut(s) 1170
EcoRI GAATTC 1 cut(s) 1598
EcoRII CCWGG 3 cut(s) 454, 745, 877
EcoT14I CCWWGG 2 cut(s) 662, 1200
EcoT38I GRGCYC 1 cut(s) 1086
ErhI CCWWGG 2 cut(s) 662, 1200
Esp3I CGTCTC 1 cut(s) 1986
FaqI GGGAC 2 cut(s) 1397, 2101
FauNDI CATATG 1 cut(s) 138
FbaI TGATCA 1 cut(s) 1153
FblI GTMKAC 1 cut(s) 496
FokI GGATG 2 cut(s) 859, 2064
FriOI GRGCYC 1 cut(s) 1086
FspBI CTAG 7 cut(s) 678, 918, 999, 1124, 1167, 1619, 1946
GlaI GCGC 1 cut(s) 1895
GsaI CCCAGC 2 cut(s) 632, 1830
GsuI CTGGAG 1 cut(s) 143
HaeIII GGCC 1 cut(s) 146
HapII CCGG 5 cut(s) 116, 1208, 1711, 1816, 2085
HgaI GACGC 2 cut(s) 156, 1968
HhaI GCGC 1 cut(s) 1896
Hin1I GRCGYC 1 cut(s) 1979
Hin6I GCGC 1 cut(s) 1894
HinP1I GCGC 1 cut(s) 1894
HincII GTYRAC 3 cut(s) 10, 1349, 1687
HindII GTYRAC 3 cut(s) 10, 1349, 1687
HinfI GANTC 7 cut(s) 498, 614, 694, 1019, 1457, 1528, 1663
HpaI GTTAAC 2 cut(s) 10, 1687
HpaII CCGG 5 cut(s) 116, 1208, 1711, 1816, 2085
HphI GGTGA 2 cut(s) 200, 940
Hpy166II GTNNAC 9 cut(s) 10, 439, 497, 565, 1349, 1612, 1632, 1687, 1999
Hpy188I TCNGA 8 cut(s) 172, 334, 355, 387, 1158, 1291, 1453, 1743
Hpy8I GTNNAC 9 cut(s) 10, 439, 497, 565, 1349, 1612, 1632, 1687, 1999
Hpy99I CGWCG 1 cut(s) 1091
HpyAV CCTTC 2 cut(s) 234, 919
HpyCH4III ACNGT 8 cut(s) 111, 346, 517, 734, 886, 1060, 1411, 2101
HpyCH4IV ACGT 6 cut(s) 716, 952, 990, 1192, 1941, 2090
HpyF3I CTNAG 5 cut(s) 171, 363, 1023, 1221, 1392
HpySE526I ACGT 6 cut(s) 716, 952, 990, 1192, 1941, 2090
Hsp92I GRCGYC 1 cut(s) 1979
HspAI GCGC 1 cut(s) 1894
KpnI GGTACC 1 cut(s) 738
Ksp22I TGATCA 1 cut(s) 1153
KspAI GTTAAC 2 cut(s) 10, 1687
KspI CCGCGG 1 cut(s) 1874
Kzo9I GATC 6 cut(s) 39, 196, 379, 1153, 1830, 1836
LmnI GCTCC 7 cut(s) 282, 305, 856, 982, 1064, 1202, 2143
LweI GCATC 2 cut(s) 1295, 2042
MaeI CTAG 7 cut(s) 678, 918, 999, 1124, 1167, 1619, 1946
MaeII ACGT 6 cut(s) 716, 952, 990, 1192, 1941, 2090
MaeIII GTNAC 4 cut(s) 340, 712, 958, 1937
MalI GATC 6 cut(s) 41, 198, 381, 1155, 1832, 1838
MboI GATC 6 cut(s) 39, 196, 379, 1153, 1830, 1836
MboII GAAGA 9 cut(s) 259, 374, 423, 1273, 1466, 1508, 1511, 1813, 1855
MfeI CAATTG 1 cut(s) 466
MflI RGATCY 1 cut(s) 1830
MhlI GDGCHC 2 cut(s) 1086, 1660
MlsI TGGCCA 1 cut(s) 146
MluNI TGGCCA 1 cut(s) 146
MlyI GAGTC 1 cut(s) 492
MmeI TCCRAC 2 cut(s) 378, 1126
Mox20I TGGCCA 1 cut(s) 146
MroXI GAANNNNTTC 1 cut(s) 952
MscI TGGCCA 1 cut(s) 146
MseI TTAA 8 cut(s) 9, 27, 414, 909, 1005, 1278, 1686, 1890
MslI CAYNNNNRTG 3 cut(s) 444, 608, 783
Msp20I TGGCCA 1 cut(s) 146
MspA1I CMGCKG 5 cut(s) 407, 1301, 1307, 1843, 1873
MspCI CTTAAG 1 cut(s) 1889
MspI CCGG 5 cut(s) 116, 1208, 1711, 1816, 2085
MspR9I CCNGG 7 cut(s) 116, 456, 747, 879, 1712, 1817, 2086
MunI CAATTG 1 cut(s) 466
Mva1269I GAATGC 3 cut(s) 769, 1949, 2078
MvaI CCWGG 3 cut(s) 456, 747, 879
MvnI CGCG 2 cut(s) 1873, 1896
NciI CCSGG 4 cut(s) 116, 1712, 1817, 2086
NcoI CCATGG 1 cut(s) 1200
NdeI CATATG 1 cut(s) 138
NdeII GATC 6 cut(s) 39, 196, 379, 1153, 1830, 1836
NheI GCTAGC 1 cut(s) 998
NlaIV GGNNCC 7 cut(s) 79, 453, 736, 832, 1206, 1880, 2139
NmeAIII GCCGAG 2 cut(s) 70, 617
NspI RCATGY 3 cut(s) 805, 1903, 1967
OliI CACNNNNGTG 1 cut(s) 444
PaqCI CACCTGC 1 cut(s) 65
PciI ACATGT 2 cut(s) 801, 1963
PctI GAATGC 3 cut(s) 769, 1949, 2078
PdmI GAANNNNTTC 1 cut(s) 952
PfeI GAWTC 6 cut(s) 614, 694, 1019, 1457, 1528, 1663
PflFI GACNNNGTC 1 cut(s) 1978
PflMI CCANNNNNTGG 2 cut(s) 635, 752
PfoI TCCNGGA 1 cut(s) 2084
PleI GAGTC 1 cut(s) 492
PpsI GAGTC 1 cut(s) 492
Ppu21I YACGTR 1 cut(s) 717
PscI ACATGT 2 cut(s) 801, 1963
PsiI TTATAA 1 cut(s) 204
Psp1406I AACGTT 1 cut(s) 952
Psp6I CCWGG 3 cut(s) 454, 745, 877
PspFI CCCAGC 2 cut(s) 628, 1826
PspGI CCWGG 3 cut(s) 454, 745, 877
PspN4I GGNNCC 7 cut(s) 79, 453, 736, 832, 1206, 1880, 2139
PspPI GGNCC 1 cut(s) 513
PstI CTGCAG 2 cut(s) 412, 1342
PstNI CAGNNNCTG 1 cut(s) 344
PsuI RGATCY 1 cut(s) 1830
PsyI GACNNNGTC 1 cut(s) 1978
PvuII CAGCTG 3 cut(s) 407, 1301, 1843
RsaI GTAC 6 cut(s) 113, 257, 736, 883, 1520, 1988
RsaNI GTAC 6 cut(s) 112, 256, 735, 882, 1519, 1987
RseI CAYNNNNRTG 3 cut(s) 444, 608, 783
SacII CCGCGG 1 cut(s) 1874
SaqAI TTAA 8 cut(s) 9, 27, 414, 909, 1005, 1278, 1686, 1890
Sau3AI GATC 6 cut(s) 39, 196, 379, 1153, 1830, 1836
Sau96I GGNCC 1 cut(s) 513
SchI GAGTC 1 cut(s) 492
ScrFI CCNGG 7 cut(s) 116, 456, 747, 879, 1712, 1817, 2086
SduI GDGCHC 2 cut(s) 1086, 1660
SfaNI GCATC 2 cut(s) 1295, 2042
SfcI CTRYAG 2 cut(s) 408, 1338
Sfr303I CCGCGG 1 cut(s) 1874
SgrBI CCGCGG 1 cut(s) 1874
SinI GGWCC 1 cut(s) 513
SmiMI CAYNNNNRTG 3 cut(s) 444, 608, 783
SmlI CTYRAG 3 cut(s) 760, 1889, 2111
SmoI CTYRAG 3 cut(s) 760, 1889, 2111
SnaBI TACGTA 1 cut(s) 717
SsiI CCGC 5 cut(s) 1013, 1305, 1758, 1871, 1873
SspI AATATT 1 cut(s) 182
SspMI CTAG 7 cut(s) 678, 918, 999, 1124, 1167, 1619, 1946
StyD4I CCNGG 7 cut(s) 114, 454, 745, 877, 1710, 1815, 2084
StyI CCWWGG 2 cut(s) 662, 1200
TaaI ACNGT 8 cut(s) 111, 346, 517, 734, 886, 1060, 1411, 2101
TaiI ACGT 6 cut(s) 719, 955, 993, 1195, 1944, 2093
TaqI TCGA 3 cut(s) 501, 1086, 2129
TatI WGTACW 2 cut(s) 255, 1518
TauI GCSGC 3 cut(s) 1015, 1307, 1873
TfiI GAWTC 6 cut(s) 614, 694, 1019, 1457, 1528, 1663
Tru1I TTAA 8 cut(s) 9, 27, 414, 909, 1005, 1278, 1686, 1890
Tru9I TTAA 8 cut(s) 9, 27, 414, 909, 1005, 1278, 1686, 1890
TscAI CASTG 5 cut(s) 114, 249, 364, 818, 1347
TspDTI ATGAA 6 cut(s) 468, 567, 592, 801, 1509, 2149
TspGWI ACGGA 2 cut(s) 542, 1675
TspRI CASTG 5 cut(s) 114, 249, 364, 818, 1347
Tth111I GACNNNGTC 1 cut(s) 1978
Van91I CCANNNNNTGG 2 cut(s) 635, 752
Vha464I CTTAAG 1 cut(s) 1889
VpaK11BI GGWCC 1 cut(s) 513
XagI CCTNNNNNAGG 1 cut(s) 1170
XapI RAATTY 6 cut(s) 207, 1161, 1254, 1476, 1598, 1648
XceI RCATGY 3 cut(s) 805, 1903, 1967
XcmI CCANNNNNNNNNTGG 1 cut(s) 1476
XmiI GTMKAC 1 cut(s) 496
XmnI GAANNNNTTC 1 cut(s) 952
XspI CTAG 7 cut(s) 678, 918, 999, 1124, 1167, 1619, 1946
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.