Domain of unknown function (DUF3444)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G05230 AT2G05250 AT5G35753 |
| fragaria_vesca | FvH4_6g40880 FvH4_6g40880 |
| malus_domestica | MD09G1123800.v1.1 MD17G1114600.v1.1 |
| prunus_persica | Prupe.3G200300_v2.0.a1 Prupe.3G200300_v2.0.a1 |
| pyrus_communis | pycom09g04790 pycom17g10590 |
| rosa_chinensis | RchiOBHm_Chr2g0156451 |
| rosa_laevigata | RLG00000020913 |
| rosa_multiflora | Rmu_sc0005392.1_g000017 |
| rosa_roxburghii | Rroxscaffold_2G00093030 |
| rosa_rugosa | Rorug02G0453200 |
| rosa_samantha | Rh2AG519200 Rh2BG531500 Rh2CG504400 Rh2DG540500 |
| rosa_wichuraiana | Rw2G042820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 204 |
| Acc36I | ACCTGC | 1 cut(s) | 2031 |
| Acc65I | GGTACC | 1 cut(s) | 734 |
| AccB1I | GGYRCC | 4 cut(s) | 734, 1204, 1818, 1987 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 635, 1947 |
| AccI | GTMKAC | 2 cut(s) | 496, 1914 |
| AciI | CCGC | 3 cut(s) | 42, 1749, 2086 |
| AclI | AACGTT | 1 cut(s) | 952 |
| AclWI | GGATC | 4 cut(s) | 204, 990, 2044, 2049 |
| AcoI | YGGCCR | 1 cut(s) | 1269 |
| AcsI | RAATTY | 6 cut(s) | 207, 1161, 1254, 1467, 1589, 1639 |
| AcuI | CTGAAG | 6 cut(s) | 239, 354, 368, 417, 1350, 1830 |
| AdeI | CACNNNGTG | 1 cut(s) | 1987 |
| AfaI | GTAC | 6 cut(s) | 113, 257, 377, 736, 1511, 1826 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 369, 635, 683, 731, 752, 1605, 1748, 1947 |
| AflII | CTTAAG | 1 cut(s) | 2102 |
| AjnI | CCWGG | 3 cut(s) | 745, 1983, 2122 |
| AleI | CACNNNNGTG | 1 cut(s) | 444 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1713, 1745 |
| Alw21I | GWGCWC | 1 cut(s) | 82 |
| Alw26I | GTCTC | 3 cut(s) | 32, 763, 1746 |
| AlwI | GGATC | 4 cut(s) | 204, 990, 2044, 2049 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 344, 1301, 1304 |
| AoxI | GGCC | 2 cut(s) | 665, 1269 |
| ApoI | RAATTY | 6 cut(s) | 207, 1161, 1254, 1467, 1589, 1639 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 952 |
| Asp718I | GGTACC | 1 cut(s) | 734 |
| AspS9I | GGNCC | 2 cut(s) | 513, 1596 |
| AsuC2I | CCSGG | 3 cut(s) | 116, 1703, 2028 |
| AsuHPI | GGTGA | 1 cut(s) | 940 |
| AsuNHI | GCTAGC | 2 cut(s) | 142, 998 |
| AvaII | GGWCC | 2 cut(s) | 513, 1596 |
| BaeGI | GKGCMC | 1 cut(s) | 1651 |
| BanI | GGYRCC | 4 cut(s) | 734, 1204, 1818, 1987 |
| BanII | GRGCYC | 2 cut(s) | 1086, 1574 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1039, 1071 |
| BbsI | GAAGAC | 1 cut(s) | 423 |
| Bbv12I | GWGCWC | 1 cut(s) | 82 |
| BbvCI | CCTCAGC | 1 cut(s) | 835 |
| BccI | CCATC | 6 cut(s) | 259, 305, 701, 1487, 1949, 1999 |
| BciT130I | CCWGG | 3 cut(s) | 747, 1985, 2124 |
| BciVI | GTATCC | 1 cut(s) | 1888 |
| BclI | TGATCA | 1 cut(s) | 1153 |
| BcnI | CCSGG | 3 cut(s) | 116, 1703, 2028 |
| BcoDI | GTCTC | 3 cut(s) | 32, 763, 1746 |
| BfaI | CTAG | 7 cut(s) | 143, 678, 918, 999, 1124, 1188, 1610 |
| BfmI | CTRYAG | 1 cut(s) | 408 |
| BfrI | CTTAAG | 1 cut(s) | 2102 |
| BfuAI | ACCTGC | 1 cut(s) | 2031 |
| BfuI | GTATCC | 1 cut(s) | 1888 |
| BglII | AGATCT | 1 cut(s) | 1861 |
| Bme1390I | CCNGG | 6 cut(s) | 116, 747, 1703, 1985, 2028, 2124 |
| Bme18I | GGWCC | 2 cut(s) | 513, 1596 |
| BmgT120I | GGNCC | 2 cut(s) | 513, 1596 |
| BmiI | GGNNCC | 6 cut(s) | 736, 832, 1206, 1597, 1820, 1989 |
| BmrFI | CCNGG | 6 cut(s) | 116, 747, 1703, 1985, 2028, 2124 |
| BmsI | GCATC | 4 cut(s) | 229, 871, 1295, 1956 |
| BmtI | GCTAGC | 2 cut(s) | 146, 1002 |
| BpiI | GAAGAC | 1 cut(s) | 423 |
| BpmI | CTGGAG | 1 cut(s) | 1788 |
| Bpu10I | CCTNAGC | 1 cut(s) | 835 |
| BpuEI | CTTGAG | 2 cut(s) | 143, 1988 |
| BpuMI | CCSGG | 3 cut(s) | 116, 1703, 2028 |
| Bsa29I | ATCGAT | 2 cut(s) | 2044, 2048 |
| BsaI | GGTCTC | 2 cut(s) | 32, 763 |
| BsaJI | CCNNGG | 5 cut(s) | 592, 662, 745, 1200, 2123 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1713, 1743 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 369, 635, 683, 731, 752, 1605, 1748, 1947 |
| Bse118I | RCCGGY | 1 cut(s) | 1207 |
| Bse1I | ACTGG | 4 cut(s) | 1610, 1781, 1822, 1899 |
| Bse3DI | GCAATG | 2 cut(s) | 603, 1036 |
| BseBI | CCWGG | 3 cut(s) | 747, 1985, 2124 |
| BseCI | ATCGAT | 2 cut(s) | 2044, 2048 |
| BseDI | CCNNGG | 5 cut(s) | 592, 662, 745, 1200, 2123 |
| BseGI | GGATG | 1 cut(s) | 1941 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 369, 635, 683, 731, 752, 1605, 1748, 1947 |
| BseMI | GCAATG | 2 cut(s) | 603, 1036 |
| BseMII | CTCAG | 5 cut(s) | 36, 162, 774, 849, 1374 |
| BseNI | ACTGG | 4 cut(s) | 1610, 1781, 1822, 1899 |
| BseRI | GAGGAG | 2 cut(s) | 32, 1734 |
| BseSI | GKGCMC | 1 cut(s) | 1651 |
| BseYI | CCCAGC | 2 cut(s) | 628, 2037 |
| BsgI | GTGCAG | 1 cut(s) | 505 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2048 |
| BshFI | GGCC | 2 cut(s) | 667, 1271 |
| BshNI | GGYRCC | 4 cut(s) | 734, 1204, 1818, 1987 |
| BshVI | ATCGAT | 2 cut(s) | 2044, 2048 |
| BsiEI | CGRYCG | 1 cut(s) | 2048 |
| BsiHKAI | GWGCWC | 1 cut(s) | 82 |
| BsiSI | CCGG | 4 cut(s) | 116, 1208, 1702, 2028 |
| BslFI | GGGAC | 2 cut(s) | 1388, 1805 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 369, 635, 683, 731, 752, 1605, 1748, 1947 |
| BsmAI | GTCTC | 3 cut(s) | 32, 763, 1746 |
| BsmFI | GGGAC | 2 cut(s) | 1388, 1805 |
| BsnI | GGCC | 2 cut(s) | 667, 1271 |
| Bso31I | GGTCTC | 2 cut(s) | 32, 763 |
| Bsp1286I | GDGCHC | 4 cut(s) | 82, 1086, 1574, 1651 |
| Bsp143I | GATC | 9 cut(s) | 196, 379, 982, 1153, 1796, 1861, 2041, 2045, 2049 |
| Bsp19I | CCATGG | 1 cut(s) | 1200 |
| BspACI | CCGC | 3 cut(s) | 42, 1749, 2086 |
| BspANI | GGCC | 2 cut(s) | 667, 1271 |
| BspCNI | CTCAG | 5 cut(s) | 37, 163, 773, 848, 1375 |
| BspDI | ATCGAT | 2 cut(s) | 2044, 2048 |
| BspLI | GGNNCC | 6 cut(s) | 736, 832, 1206, 1597, 1820, 1989 |
| BspMI | ACCTGC | 1 cut(s) | 2031 |
| BspOI | GCTAGC | 2 cut(s) | 146, 1002 |
| BspPI | GGATC | 4 cut(s) | 204, 990, 2044, 2049 |
| BspQI | GCTCTTC | 1 cut(s) | 858 |
| BspT107I | GGYRCC | 4 cut(s) | 734, 1204, 1818, 1987 |
| BspTI | CTTAAG | 1 cut(s) | 2102 |
| BspTNI | GGTCTC | 2 cut(s) | 32, 763 |
| BsrDI | GCAATG | 2 cut(s) | 603, 1036 |
| BsrFI | RCCGGY | 1 cut(s) | 1207 |
| BsrI | ACTGG | 4 cut(s) | 1610, 1781, 1822, 1899 |
| BssAI | RCCGGY | 1 cut(s) | 1207 |
| BssECI | CCNNGG | 5 cut(s) | 592, 662, 745, 1200, 2123 |
| BssMI | GATC | 9 cut(s) | 196, 379, 982, 1153, 1796, 1861, 2041, 2045, 2049 |
| BssNAI | GTATAC | 1 cut(s) | 1915 |
| BssT1I | CCWWGG | 2 cut(s) | 662, 1200 |
| Bst1107I | GTATAC | 1 cut(s) | 1915 |
| Bst2UI | CCWGG | 3 cut(s) | 747, 1985, 2124 |
| Bst4CI | ACNGT | 8 cut(s) | 111, 346, 517, 991, 1060, 1402, 1514, 1912 |
| Bst6I | CTCTTC | 2 cut(s) | 858, 2007 |
| BstAFI | CTTAAG | 1 cut(s) | 2102 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 528, 1301, 1987, 2113 |
| BstC8I | GCNNGC | 3 cut(s) | 144, 996, 1000 |
| BstDEI | CTNAG | 7 cut(s) | 45, 171, 760, 835, 1023, 1166, 1383 |
| BstDSI | CCRYGG | 1 cut(s) | 1200 |
| BstF5I | GGATG | 1 cut(s) | 1941 |
| BstKTI | GATC | 9 cut(s) | 199, 382, 985, 1156, 1799, 1864, 2044, 2048, 2052 |
| BstMAI | GTCTC | 3 cut(s) | 32, 763, 1746 |
| BstMBI | GATC | 9 cut(s) | 196, 379, 982, 1153, 1796, 1861, 2041, 2045, 2049 |
| BstMCI | CGRYCG | 1 cut(s) | 2048 |
| BstNI | CCWGG | 3 cut(s) | 747, 1985, 2124 |
| BstNSI | RCATGY | 2 cut(s) | 1676, 2116 |
| BstSCI | CCNGG | 6 cut(s) | 114, 745, 1701, 1983, 2026, 2122 |
| BstSFI | CTRYAG | 1 cut(s) | 408 |
| BstSLI | GKGCMC | 1 cut(s) | 1651 |
| BstV2I | GAAGAC | 1 cut(s) | 423 |
| BstX2I | RGATCY | 2 cut(s) | 982, 1861 |
| BstYI | RGATCY | 2 cut(s) | 982, 1861 |
| BstZ17I | GTATAC | 1 cut(s) | 1915 |
| Bsu15I | ATCGAT | 2 cut(s) | 2044, 2048 |
| BsuI | GTATCC | 1 cut(s) | 1888 |
| BsuRI | GGCC | 2 cut(s) | 667, 1271 |
| BsuTUI | ATCGAT | 2 cut(s) | 2044, 2048 |
| BtgI | CCRYGG | 1 cut(s) | 1200 |
| BtsCI | GGATG | 1 cut(s) | 1941 |
| BtsI | GCAGTG | 1 cut(s) | 357 |
| BtsIMutI | CAGTG | 3 cut(s) | 107, 357, 818 |
| BveI | ACCTGC | 1 cut(s) | 2031 |
| Cac8I | GCNNGC | 3 cut(s) | 144, 996, 1000 |
| CaiI | CAGNNNCTG | 3 cut(s) | 344, 1301, 1304 |
| Cfr10I | RCCGGY | 1 cut(s) | 1207 |
| Cfr13I | GGNCC | 2 cut(s) | 513, 1596 |
| ClaI | ATCGAT | 2 cut(s) | 2044, 2048 |
| CseI | GACGC | 1 cut(s) | 1325 |
| CsiI | ACCWGGT | 1 cut(s) | 1983 |
| Csp6I | GTAC | 6 cut(s) | 112, 256, 376, 735, 1510, 1825 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 951, 986, 1615, 1650 |
| CviQI | GTAC | 6 cut(s) | 112, 256, 376, 735, 1510, 1825 |
| DdeI | CTNAG | 7 cut(s) | 45, 171, 760, 835, 1023, 1166, 1383 |
| DpnI | GATC | 9 cut(s) | 198, 381, 984, 1155, 1798, 1863, 2043, 2047, 2051 |
| DpnII | GATC | 9 cut(s) | 196, 379, 982, 1153, 1796, 1861, 2041, 2045, 2049 |
| DraIII | CACNNNGTG | 1 cut(s) | 1987 |
| EaeI | YGGCCR | 1 cut(s) | 1269 |
| Eam1104I | CTCTTC | 2 cut(s) | 858, 2007 |
| EarI | CTCTTC | 2 cut(s) | 858, 2007 |
| Eco130I | CCWWGG | 2 cut(s) | 662, 1200 |
| Eco24I | GRGCYC | 2 cut(s) | 1086, 1574 |
| Eco31I | GGTCTC | 2 cut(s) | 32, 763 |
| Eco47I | GGWCC | 2 cut(s) | 513, 1596 |
| Eco57I | CTGAAG | 6 cut(s) | 239, 354, 368, 417, 1350, 1830 |
| EcoRI | GAATTC | 1 cut(s) | 1589 |
| EcoRII | CCWGG | 3 cut(s) | 745, 1983, 2122 |
| EcoT14I | CCWWGG | 2 cut(s) | 662, 1200 |
| EcoT38I | GRGCYC | 2 cut(s) | 1086, 1574 |
| ErhI | CCWWGG | 2 cut(s) | 662, 1200 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 722, 754 |
| FaqI | GGGAC | 2 cut(s) | 1388, 1805 |
| FauNDI | CATATG | 2 cut(s) | 138, 718 |
| FbaI | TGATCA | 1 cut(s) | 1153 |
| FblI | GTMKAC | 2 cut(s) | 496, 1914 |
| FokI | GGATG | 1 cut(s) | 1928 |
| FriOI | GRGCYC | 2 cut(s) | 1086, 1574 |
| FspBI | CTAG | 7 cut(s) | 143, 678, 918, 999, 1124, 1188, 1610 |
| GsaI | CCCAGC | 2 cut(s) | 632, 2041 |
| GsuI | CTGGAG | 1 cut(s) | 1788 |
| HaeIII | GGCC | 2 cut(s) | 667, 1271 |
| HapII | CCGG | 4 cut(s) | 116, 1208, 1702, 2028 |
| HgaI | GACGC | 1 cut(s) | 1325 |
| HincII | GTYRAC | 3 cut(s) | 10, 1340, 1678 |
| HindII | GTYRAC | 3 cut(s) | 10, 1340, 1678 |
| HindIII | AAGCTT | 2 cut(s) | 323, 2099 |
| HinfI | GANTC | 8 cut(s) | 614, 694, 1019, 1448, 1519, 1654, 1902, 1951 |
| HpaI | GTTAAC | 2 cut(s) | 10, 1678 |
| HpaII | CCGG | 4 cut(s) | 116, 1208, 1702, 2028 |
| HphI | GGTGA | 1 cut(s) | 940 |
| Hpy166II | GTNNAC | 9 cut(s) | 10, 439, 497, 565, 1340, 1603, 1623, 1678, 1915 |
| Hpy188III | TCNNGA | 9 cut(s) | 247, 511, 774, 828, 936, 1523, 1658, 1844, 1906 |
| Hpy8I | GTNNAC | 9 cut(s) | 10, 439, 497, 565, 1340, 1603, 1623, 1678, 1915 |
| HpyAV | CCTTC | 5 cut(s) | 28, 234, 363, 919, 1041 |
| HpyCH4III | ACNGT | 8 cut(s) | 111, 346, 517, 991, 1060, 1402, 1514, 1912 |
| HpyCH4IV | ACGT | 3 cut(s) | 149, 952, 1192 |
| HpyCH4V | TGCA | 8 cut(s) | 92, 230, 242, 522, 531, 848, 1352, 1395 |
| HpyF3I | CTNAG | 7 cut(s) | 45, 171, 760, 835, 1023, 1166, 1383 |
| HpySE526I | ACGT | 3 cut(s) | 149, 952, 1192 |
| KpnI | GGTACC | 1 cut(s) | 738 |
| Ksp22I | TGATCA | 1 cut(s) | 1153 |
| KspAI | GTTAAC | 2 cut(s) | 10, 1678 |
| Kzo9I | GATC | 9 cut(s) | 196, 379, 982, 1153, 1796, 1861, 2041, 2045, 2049 |
| LguI | GCTCTTC | 1 cut(s) | 858 |
| LmnI | GCTCC | 4 cut(s) | 282, 305, 1064, 1202 |
| LweI | GCATC | 4 cut(s) | 229, 871, 1295, 1956 |
| MabI | ACCWGGT | 1 cut(s) | 1983 |
| MaeI | CTAG | 7 cut(s) | 143, 678, 918, 999, 1124, 1188, 1610 |
| MaeII | ACGT | 3 cut(s) | 149, 952, 1192 |
| MaeIII | GTNAC | 6 cut(s) | 340, 712, 958, 1998, 2018, 2136 |
| MalI | GATC | 9 cut(s) | 198, 381, 984, 1155, 1798, 1863, 2043, 2047, 2051 |
| MboI | GATC | 9 cut(s) | 196, 379, 982, 1153, 1796, 1861, 2041, 2045, 2049 |
| MfeI | CAATTG | 2 cut(s) | 398, 466 |
| MflI | RGATCY | 2 cut(s) | 982, 1861 |
| MhlI | GDGCHC | 4 cut(s) | 82, 1086, 1574, 1651 |
| MmeI | TCCRAC | 2 cut(s) | 378, 1208 |
| MroXI | GAANNNNTTC | 1 cut(s) | 952 |
| MseI | TTAA | 6 cut(s) | 9, 27, 909, 1278, 1677, 2103 |
| MslI | CAYNNNNRTG | 5 cut(s) | 444, 608, 783, 811, 1832 |
| MspA1I | CMGCKG | 4 cut(s) | 44, 839, 1301, 1808 |
| MspCI | CTTAAG | 1 cut(s) | 2102 |
| MspI | CCGG | 4 cut(s) | 116, 1208, 1702, 2028 |
| MspR9I | CCNGG | 6 cut(s) | 116, 747, 1703, 1985, 2028, 2124 |
| MunI | CAATTG | 2 cut(s) | 398, 466 |
| MvaI | CCWGG | 3 cut(s) | 747, 1985, 2124 |
| NciI | CCSGG | 3 cut(s) | 116, 1703, 2028 |
| NcoI | CCATGG | 1 cut(s) | 1200 |
| NdeI | CATATG | 2 cut(s) | 138, 718 |
| NdeII | GATC | 9 cut(s) | 196, 379, 982, 1153, 1796, 1861, 2041, 2045, 2049 |
| NheI | GCTAGC | 2 cut(s) | 142, 998 |
| NlaIV | GGNNCC | 6 cut(s) | 736, 832, 1206, 1597, 1820, 1989 |
| NmeAIII | GCCGAG | 2 cut(s) | 617, 1297 |
| NspI | RCATGY | 2 cut(s) | 1676, 2116 |
| OliI | CACNNNNGTG | 1 cut(s) | 444 |
| PciSI | GCTCTTC | 1 cut(s) | 858 |
| PdmI | GAANNNNTTC | 1 cut(s) | 952 |
| PfeI | GAWTC | 8 cut(s) | 614, 694, 1019, 1448, 1519, 1654, 1902, 1951 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 635, 1947 |
| Ple19I | CGATCG | 1 cut(s) | 2048 |
| PsiI | TTATAA | 1 cut(s) | 204 |
| Psp1406I | AACGTT | 1 cut(s) | 952 |
| Psp6I | CCWGG | 3 cut(s) | 745, 1983, 2122 |
| PspFI | CCCAGC | 2 cut(s) | 628, 2037 |
| PspGI | CCWGG | 3 cut(s) | 745, 1983, 2122 |
| PspN4I | GGNNCC | 6 cut(s) | 736, 832, 1206, 1597, 1820, 1989 |
| PspPI | GGNCC | 2 cut(s) | 513, 1596 |
| PstNI | CAGNNNCTG | 3 cut(s) | 344, 1301, 1304 |
| PsuI | RGATCY | 2 cut(s) | 982, 1861 |
| PvuI | CGATCG | 1 cut(s) | 2048 |
| PvuII | CAGCTG | 3 cut(s) | 839, 1301, 1808 |
| RsaI | GTAC | 6 cut(s) | 113, 257, 377, 736, 1511, 1826 |
| RsaNI | GTAC | 6 cut(s) | 112, 256, 376, 735, 1510, 1825 |
| RseI | CAYNNNNRTG | 5 cut(s) | 444, 608, 783, 811, 1832 |
| SapI | GCTCTTC | 1 cut(s) | 858 |
| SaqAI | TTAA | 6 cut(s) | 9, 27, 909, 1278, 1677, 2103 |
| Sau3AI | GATC | 9 cut(s) | 196, 379, 982, 1153, 1796, 1861, 2041, 2045, 2049 |
| Sau96I | GGNCC | 2 cut(s) | 513, 1596 |
| ScrFI | CCNGG | 6 cut(s) | 116, 747, 1703, 1985, 2028, 2124 |
| SduI | GDGCHC | 4 cut(s) | 82, 1086, 1574, 1651 |
| SexAI | ACCWGGT | 1 cut(s) | 1983 |
| SfaNI | GCATC | 4 cut(s) | 229, 871, 1295, 1956 |
| SfcI | CTRYAG | 1 cut(s) | 408 |
| SinI | GGWCC | 2 cut(s) | 513, 1596 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 444, 608, 783, 811, 1832 |
| SmlI | CTYRAG | 3 cut(s) | 122, 2003, 2102 |
| SmoI | CTYRAG | 3 cut(s) | 122, 2003, 2102 |
| SsiI | CCGC | 3 cut(s) | 42, 1749, 2086 |
| SspI | AATATT | 1 cut(s) | 182 |
| SspMI | CTAG | 7 cut(s) | 143, 678, 918, 999, 1124, 1188, 1610 |
| StyD4I | CCNGG | 6 cut(s) | 114, 745, 1701, 1983, 2026, 2122 |
| StyI | CCWWGG | 2 cut(s) | 662, 1200 |
| TaaI | ACNGT | 8 cut(s) | 111, 346, 517, 991, 1060, 1402, 1514, 1912 |
| TaiI | ACGT | 3 cut(s) | 152, 955, 1195 |
| TaqI | TCGA | 4 cut(s) | 1086, 1771, 2044, 2048 |
| TatI | WGTACW | 3 cut(s) | 255, 1509, 1824 |
| TfiI | GAWTC | 8 cut(s) | 614, 694, 1019, 1448, 1519, 1654, 1902, 1951 |
| Tru1I | TTAA | 6 cut(s) | 9, 27, 909, 1278, 1677, 2103 |
| Tru9I | TTAA | 6 cut(s) | 9, 27, 909, 1278, 1677, 2103 |
| TscAI | CASTG | 3 cut(s) | 114, 364, 818 |
| TspDTI | ATGAA | 7 cut(s) | 468, 567, 592, 801, 845, 1104, 1500 |
| TspGWI | ACGGA | 4 cut(s) | 542, 1588, 1666, 1943 |
| TspRI | CASTG | 3 cut(s) | 114, 364, 818 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 635, 1947 |
| Vha464I | CTTAAG | 1 cut(s) | 2102 |
| VpaK11BI | GGWCC | 2 cut(s) | 513, 1596 |
| XapI | RAATTY | 6 cut(s) | 207, 1161, 1254, 1467, 1589, 1639 |
| XceI | RCATGY | 2 cut(s) | 1676, 2116 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1467 |
| XmiI | GTMKAC | 2 cut(s) | 496, 1914 |
| XmnI | GAANNNNTTC | 1 cut(s) | 952 |
| XspI | CTAG | 7 cut(s) | 143, 678, 918, 999, 1124, 1188, 1610 |