Domain of unknown function (DUF3444)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G05230 AT2G05250 AT5G35753 |
| fragaria_vesca | FvH4_6g40880 FvH4_6g40880 |
| malus_domestica | MD09G1123800.v1.1 MD17G1114600.v1.1 |
| prunus_persica | Prupe.3G200300_v2.0.a1 Prupe.3G200300_v2.0.a1 |
| pyrus_communis | pycom09g04790 pycom17g10590 |
| rosa_chinensis | RchiOBHm_Chr2g0156451 |
| rosa_laevigata | RLG00000020913 |
| rosa_multiflora | Rmu_sc0005392.1_g000017 |
| rosa_roxburghii | Rroxscaffold_2G00093030 |
| rosa_rugosa | Rorug02G0453200 |
| rosa_samantha | Rh2AG519200 Rh2BG531500 Rh2CG504400 Rh2DG540500 |
| rosa_wichuraiana | Rw2G042820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 496 |
| Acc65I | GGTACC | 1 cut(s) | 836 |
| AccB1I | GGYRCC | 6 cut(s) | 836, 857, 1244, 1309, 2046, 2215 |
| AccB7I | CCANNNNNTGG | 5 cut(s) | 755, 833, 854, 1976, 2175 |
| AccI | GTMKAC | 2 cut(s) | 616, 2142 |
| AccIII | TCCGGA | 2 cut(s) | 262, 672 |
| AciI | CCGC | 5 cut(s) | 312, 1845, 1930, 2220, 2363 |
| AclI | AACGTT | 1 cut(s) | 1057 |
| AclWI | GGATC | 4 cut(s) | 1197, 2270, 2277, 2283 |
| AcoI | YGGCCR | 1 cut(s) | 779 |
| AcsI | RAATTY | 2 cut(s) | 1817, 1867 |
| AcuI | CTGAAG | 3 cut(s) | 501, 515, 1200 |
| AcvI | CACGTG | 1 cut(s) | 74 |
| AdeI | CACNNNGTG | 1 cut(s) | 2215 |
| AfaI | GTAC | 4 cut(s) | 323, 838, 1739, 1749 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 21, 755, 794, 833, 854, 1833, 1976, 2175 |
| AflII | CTTAAG | 1 cut(s) | 173 |
| AflIII | ACRYGT | 2 cut(s) | 71, 1531 |
| AjiI | CACGTC | 1 cut(s) | 1532 |
| AjnI | CCWGG | 4 cut(s) | 862, 1561, 2211, 2254 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 104, 136 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1832, 1864, 1941, 1973 |
| Alw21I | GWGCWC | 6 cut(s) | 63, 923, 1279, 1561, 1802, 1879 |
| Alw26I | GTCTC | 8 cut(s) | 481, 1571, 1602, 1765, 2110, 2367, 2394, 2421 |
| Alw44I | GTGCAC | 1 cut(s) | 1275 |
| AlwI | GGATC | 4 cut(s) | 1197, 2270, 2277, 2283 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 330, 1400, 1637 |
| Ama87I | CYCGRG | 1 cut(s) | 56 |
| Aor13HI | TCCGGA | 2 cut(s) | 262, 672 |
| AoxI | GGCC | 4 cut(s) | 12, 168, 779, 1823 |
| ApaI | GGGCCC | 1 cut(s) | 1827 |
| ApaLI | GTGCAC | 1 cut(s) | 1275 |
| ApoI | RAATTY | 2 cut(s) | 1817, 1867 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1057 |
| Asp718I | GGTACC | 1 cut(s) | 836 |
| AspLEI | GCGC | 3 cut(s) | 464, 2168, 2344 |
| AspS9I | GGNCC | 7 cut(s) | 169, 489, 633, 963, 1139, 1823, 1824 |
| AsuHPI | GGTGA | 4 cut(s) | 347, 1499, 1843, 2201 |
| AsuNHI | GCTAGC | 1 cut(s) | 1103 |
| AvaI | CYCGRG | 1 cut(s) | 56 |
| AvaII | GGWCC | 4 cut(s) | 489, 633, 963, 1139 |
| BaeGI | GKGCMC | 4 cut(s) | 862, 1279, 1827, 2220 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 820, 853 |
| BalI | TGGCCA | 1 cut(s) | 781 |
| BamHI | GGATCC | 1 cut(s) | 2275 |
| BanI | GGYRCC | 6 cut(s) | 836, 857, 1244, 1309, 2046, 2215 |
| BanII | GRGCYC | 8 cut(s) | 63, 923, 1561, 1620, 1802, 1827, 1879, 1993 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 34 |
| BbrPI | CACGTG | 1 cut(s) | 74 |
| BbsI | GAAGAC | 1 cut(s) | 80 |
| Bbv12I | GWGCWC | 6 cut(s) | 63, 923, 1279, 1561, 1802, 1879 |
| BbvCI | CCTCAGC | 1 cut(s) | 2487 |
| BccI | CCATC | 3 cut(s) | 406, 452, 1715 |
| BceAI | ACGGC | 1 cut(s) | 1323 |
| BciT130I | CCWGG | 4 cut(s) | 864, 1563, 2213, 2256 |
| BclI | TGATCA | 1 cut(s) | 1258 |
| BcoDI | GTCTC | 8 cut(s) | 481, 1571, 1602, 1765, 2110, 2367, 2394, 2421 |
| BfaI | CTAG | 6 cut(s) | 1104, 1229, 1272, 1326, 1605, 1944 |
| BfmI | CTRYAG | 5 cut(s) | 555, 579, 1392, 1413, 2337 |
| BfoI | RGCGCY | 3 cut(s) | 465, 2169, 2345 |
| BfrI | CTTAAG | 1 cut(s) | 173 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 176 |
| Bme1390I | CCNGG | 4 cut(s) | 864, 1563, 2213, 2256 |
| Bme18I | GGWCC | 4 cut(s) | 489, 633, 963, 1139 |
| BmeT110I | CYCGRG | 1 cut(s) | 56 |
| BmgBI | CACGTC | 1 cut(s) | 1532 |
| BmgT120I | GGNCC | 7 cut(s) | 169, 489, 633, 963, 1139, 1823, 1824 |
| BmrFI | CCNGG | 4 cut(s) | 864, 1563, 2213, 2256 |
| BmsI | GCATC | 4 cut(s) | 376, 1289, 1312, 1576 |
| BmtI | GCTAGC | 1 cut(s) | 1107 |
| BpiI | GAAGAC | 1 cut(s) | 80 |
| BpmI | CTGGAG | 9 cut(s) | 612, 963, 1044, 1545, 1572, 2016, 2274, 2301, 2439 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1614, 2487 |
| BpuEI | CTTGAG | 2 cut(s) | 361, 1816 |
| Bsa29I | ATCGAT | 1 cut(s) | 1341 |
| BsaAI | YACGTR | 2 cut(s) | 74, 1751 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1116, 1337, 2274 |
| BsaI | GGTCTC | 2 cut(s) | 1602, 1765 |
| BsaJI | CCNNGG | 5 cut(s) | 776, 862, 1305, 1562, 1730 |
| BsaWI | WCCGGW | 2 cut(s) | 262, 672 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1941, 1971 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 21, 755, 794, 833, 854, 1833, 1976, 2175 |
| Bse118I | RCCGGY | 1 cut(s) | 14 |
| Bse1I | ACTGG | 3 cut(s) | 880, 1631, 1838 |
| Bse3DI | GCAATG | 1 cut(s) | 723 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1116, 1337, 2274 |
| BseAI | TCCGGA | 2 cut(s) | 262, 672 |
| BseBI | CCWGG | 4 cut(s) | 864, 1563, 2213, 2256 |
| BseCI | ATCGAT | 1 cut(s) | 1341 |
| BseDI | CCNNGG | 5 cut(s) | 776, 862, 1305, 1562, 1730 |
| BseGI | GGATG | 1 cut(s) | 1117 |
| BseJI | GATNNNNATC | 3 cut(s) | 1116, 1337, 2274 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 21, 755, 794, 833, 854, 1833, 1976, 2175 |
| BseMI | GCAATG | 1 cut(s) | 723 |
| BseMII | CTCAG | 8 cut(s) | 30, 128, 183, 309, 1134, 1605, 1776, 2478 |
| BseNI | ACTGG | 3 cut(s) | 880, 1631, 1838 |
| BseRI | GAGGAG | 4 cut(s) | 20, 179, 1569, 1962 |
| BseSI | GKGCMC | 4 cut(s) | 862, 1279, 1827, 2220 |
| BseYI | CCCAGC | 2 cut(s) | 748, 847 |
| BshFI | GGCC | 4 cut(s) | 14, 170, 781, 1825 |
| BshNI | GGYRCC | 6 cut(s) | 836, 857, 1244, 1309, 2046, 2215 |
| BshVI | ATCGAT | 1 cut(s) | 1341 |
| BsiHKAI | GWGCWC | 6 cut(s) | 63, 923, 1279, 1561, 1802, 1879 |
| BsiHKCI | CYCGRG | 1 cut(s) | 56 |
| BsiSI | CCGG | 3 cut(s) | 15, 263, 673 |
| BslFI | GGGAC | 2 cut(s) | 1619, 2257 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 21, 755, 794, 833, 854, 1833, 1976, 2175 |
| BsmAI | GTCTC | 8 cut(s) | 481, 1571, 1602, 1765, 2110, 2367, 2394, 2421 |
| BsmBI | CGTCTC | 4 cut(s) | 2110, 2367, 2394, 2421 |
| BsmFI | GGGAC | 2 cut(s) | 1619, 2257 |
| BsmI | GAATGC | 1 cut(s) | 799 |
| BsnI | GGCC | 4 cut(s) | 14, 170, 781, 1825 |
| Bso31I | GGTCTC | 2 cut(s) | 1602, 1765 |
| BsoBI | CYCGRG | 1 cut(s) | 56 |
| Bsp120I | GGGCCC | 1 cut(s) | 1823 |
| Bsp13I | TCCGGA | 2 cut(s) | 262, 672 |
| BspACI | CCGC | 5 cut(s) | 312, 1845, 1930, 2220, 2363 |
| BspANI | GGCC | 4 cut(s) | 14, 170, 781, 1825 |
| BspCNI | CTCAG | 8 cut(s) | 31, 129, 184, 310, 1135, 1606, 1775, 2479 |
| BspDI | ATCGAT | 1 cut(s) | 1341 |
| BspEI | TCCGGA | 2 cut(s) | 262, 672 |
| BspMAI | CTGCAG | 4 cut(s) | 559, 583, 1417, 2341 |
| BspOI | GCTAGC | 1 cut(s) | 1107 |
| BspPI | GGATC | 4 cut(s) | 1197, 2270, 2277, 2283 |
| BspT107I | GGYRCC | 6 cut(s) | 836, 857, 1244, 1309, 2046, 2215 |
| BspTI | CTTAAG | 1 cut(s) | 173 |
| BspTNI | GGTCTC | 2 cut(s) | 1602, 1765 |
| BsrDI | GCAATG | 1 cut(s) | 723 |
| BsrFI | RCCGGY | 1 cut(s) | 14 |
| BsrI | ACTGG | 3 cut(s) | 880, 1631, 1838 |
| BssAI | RCCGGY | 1 cut(s) | 14 |
| BssECI | CCNNGG | 5 cut(s) | 776, 862, 1305, 1562, 1730 |
| BssNAI | GTATAC | 1 cut(s) | 2143 |
| BssT1I | CCWWGG | 1 cut(s) | 776 |
| Bst1107I | GTATAC | 1 cut(s) | 2143 |
| Bst2UI | CCWGG | 4 cut(s) | 864, 1563, 2213, 2256 |
| Bst4CI | ACNGT | 3 cut(s) | 637, 710, 1742 |
| Bst6I | CTCTTC | 3 cut(s) | 1371, 2082, 2182 |
| BstAFI | CTTAAG | 1 cut(s) | 173 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 587, 648, 857 |
| BstBAI | YACGTR | 2 cut(s) | 74, 1751 |
| BstC8I | GCNNGC | 4 cut(s) | 1105, 1727, 2124, 2220 |
| BstDEI | CTNAG | 9 cut(s) | 26, 39, 137, 192, 318, 1143, 1614, 1762, 2487 |
| BstDSI | CCRYGG | 1 cut(s) | 1305 |
| BstEII | GGTNACC | 1 cut(s) | 814 |
| BstF5I | GGATG | 1 cut(s) | 1117 |
| BstH2I | RGCGCY | 3 cut(s) | 465, 2169, 2345 |
| BstHHI | GCGC | 3 cut(s) | 464, 2168, 2344 |
| BstMAI | GTCTC | 8 cut(s) | 481, 1571, 1602, 1765, 2110, 2367, 2394, 2421 |
| BstNI | CCWGG | 4 cut(s) | 864, 1563, 2213, 2256 |
| BstNSI | RCATGY | 5 cut(s) | 884, 1439, 1630, 1729, 1904 |
| BstPI | GGTNACC | 1 cut(s) | 814 |
| BstSCI | CCNGG | 4 cut(s) | 862, 1561, 2211, 2254 |
| BstSFI | CTRYAG | 5 cut(s) | 555, 579, 1392, 1413, 2337 |
| BstSLI | GKGCMC | 4 cut(s) | 862, 1279, 1827, 2220 |
| BstV2I | GAAGAC | 1 cut(s) | 80 |
| BstX2I | RGATCY | 2 cut(s) | 2269, 2275 |
| BstYI | RGATCY | 2 cut(s) | 2269, 2275 |
| BstZ17I | GTATAC | 1 cut(s) | 2143 |
| Bsu15I | ATCGAT | 1 cut(s) | 1341 |
| BsuRI | GGCC | 4 cut(s) | 14, 170, 781, 1825 |
| BsuTUI | ATCGAT | 1 cut(s) | 1341 |
| BtgI | CCRYGG | 1 cut(s) | 1305 |
| BtrI | CACGTC | 1 cut(s) | 1532 |
| BtsCI | GGATG | 1 cut(s) | 1117 |
| BtsI | GCAGTG | 2 cut(s) | 246, 396 |
| BtsIMutI | CAGTG | 3 cut(s) | 246, 396, 920 |
| Cac8I | GCNNGC | 4 cut(s) | 1105, 1727, 2124, 2220 |
| CaiI | CAGNNNCTG | 3 cut(s) | 330, 1400, 1637 |
| CfoI | GCGC | 3 cut(s) | 464, 2168, 2344 |
| Cfr10I | RCCGGY | 1 cut(s) | 14 |
| Cfr13I | GGNCC | 7 cut(s) | 169, 489, 633, 963, 1139, 1823, 1824 |
| ClaI | ATCGAT | 1 cut(s) | 1341 |
| CseI | GACGC | 1 cut(s) | 2092 |
| CsiI | ACCWGGT | 2 cut(s) | 2211, 2254 |
| Csp6I | GTAC | 4 cut(s) | 322, 837, 1738, 1748 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1843, 1878 |
| CviQI | GTAC | 4 cut(s) | 322, 837, 1738, 1748 |
| DdeI | CTNAG | 9 cut(s) | 26, 39, 137, 192, 318, 1143, 1614, 1762, 2487 |
| DraIII | CACNNNGTG | 1 cut(s) | 2215 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 496 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 496 |
| EaeI | YGGCCR | 1 cut(s) | 779 |
| Eam1104I | CTCTTC | 3 cut(s) | 1371, 2082, 2182 |
| EarI | CTCTTC | 3 cut(s) | 1371, 2082, 2182 |
| Ecl136II | GAGCTC | 5 cut(s) | 61, 921, 1559, 1800, 1877 |
| Eco130I | CCWWGG | 1 cut(s) | 776 |
| Eco24I | GRGCYC | 8 cut(s) | 63, 923, 1561, 1620, 1802, 1827, 1879, 1993 |
| Eco31I | GGTCTC | 2 cut(s) | 1602, 1765 |
| Eco32I | GATATC | 1 cut(s) | 1984 |
| Eco47I | GGWCC | 4 cut(s) | 489, 633, 963, 1139 |
| Eco53kI | GAGCTC | 5 cut(s) | 61, 921, 1559, 1800, 1877 |
| Eco57I | CTGAAG | 3 cut(s) | 501, 515, 1200 |
| Eco72I | CACGTG | 1 cut(s) | 74 |
| Eco88I | CYCGRG | 1 cut(s) | 56 |
| Eco91I | GGTNACC | 1 cut(s) | 814 |
| EcoICRI | GAGCTC | 5 cut(s) | 61, 921, 1559, 1800, 1877 |
| EcoO109I | RGGNCCY | 2 cut(s) | 169, 963 |
| EcoO65I | GGTNACC | 1 cut(s) | 814 |
| EcoRI | GAATTC | 1 cut(s) | 1817 |
| EcoRII | CCWGG | 4 cut(s) | 862, 1561, 2211, 2254 |
| EcoRV | GATATC | 1 cut(s) | 1984 |
| EcoT14I | CCWWGG | 1 cut(s) | 776 |
| EcoT38I | GRGCYC | 8 cut(s) | 63, 923, 1561, 1620, 1802, 1827, 1879, 1993 |
| ErhI | CCWWGG | 1 cut(s) | 776 |
| Esp3I | CGTCTC | 4 cut(s) | 2110, 2367, 2394, 2421 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 503, 535, 2286, 2318 |
| FaqI | GGGAC | 2 cut(s) | 1619, 2257 |
| FauI | CCCGC | 2 cut(s) | 1838, 2227 |
| FbaI | TGATCA | 1 cut(s) | 1258 |
| FblI | GTMKAC | 2 cut(s) | 616, 2142 |
| FokI | GGATG | 1 cut(s) | 1104 |
| FriOI | GRGCYC | 8 cut(s) | 63, 923, 1561, 1620, 1802, 1827, 1879, 1993 |
| FspBI | CTAG | 6 cut(s) | 1104, 1229, 1272, 1326, 1605, 1944 |
| GlaI | GCGC | 3 cut(s) | 463, 2167, 2343 |
| GsaI | CCCAGC | 2 cut(s) | 752, 851 |
| GsuI | CTGGAG | 9 cut(s) | 612, 963, 1044, 1545, 1572, 2016, 2274, 2301, 2439 |
| HaeII | RGCGCY | 3 cut(s) | 465, 2169, 2345 |
| HaeIII | GGCC | 4 cut(s) | 14, 170, 781, 1825 |
| HapII | CCGG | 3 cut(s) | 15, 263, 673 |
| HgaI | GACGC | 1 cut(s) | 2092 |
| HhaI | GCGC | 3 cut(s) | 464, 2168, 2344 |
| Hin6I | GCGC | 3 cut(s) | 462, 2166, 2342 |
| HinP1I | GCGC | 3 cut(s) | 462, 2166, 2342 |
| HincII | GTYRAC | 4 cut(s) | 157, 562, 685, 1906 |
| HindII | GTYRAC | 4 cut(s) | 157, 562, 685, 1906 |
| HinfI | GANTC | 7 cut(s) | 327, 355, 734, 1182, 1640, 2179, 2467 |
| HpaI | GTTAAC | 3 cut(s) | 157, 562, 1906 |
| HpaII | CCGG | 3 cut(s) | 15, 263, 673 |
| HphI | GGTGA | 4 cut(s) | 347, 1499, 1843, 2201 |
| Hpy166II | GTNNAC | 9 cut(s) | 157, 562, 617, 685, 1277, 1831, 1851, 1906, 2143 |
| Hpy8I | GTNNAC | 9 cut(s) | 157, 562, 617, 685, 1277, 1831, 1851, 1906, 2143 |
| Hpy99I | CGWCG | 2 cut(s) | 105, 2237 |
| HpyAV | CCTTC | 6 cut(s) | 4, 107, 238, 772, 2234, 2288 |
| HpyCH4III | ACNGT | 3 cut(s) | 637, 710, 1742 |
| HpyCH4IV | ACGT | 5 cut(s) | 73, 1057, 1284, 1531, 1750 |
| HpyF3I | CTNAG | 9 cut(s) | 26, 39, 137, 192, 318, 1143, 1614, 1762, 2487 |
| HpySE526I | ACGT | 5 cut(s) | 73, 1057, 1284, 1531, 1750 |
| HspAI | GCGC | 3 cut(s) | 462, 2166, 2342 |
| Kpn2I | TCCGGA | 2 cut(s) | 262, 672 |
| KpnI | GGTACC | 1 cut(s) | 840 |
| Ksp22I | TGATCA | 1 cut(s) | 1258 |
| KspAI | GTTAAC | 3 cut(s) | 157, 562, 1906 |
| LweI | GCATC | 4 cut(s) | 376, 1289, 1312, 1576 |
| MabI | ACCWGGT | 2 cut(s) | 2211, 2254 |
| MaeI | CTAG | 6 cut(s) | 1104, 1229, 1272, 1326, 1605, 1944 |
| MaeII | ACGT | 5 cut(s) | 73, 1057, 1284, 1531, 1750 |
| MaeIII | GTNAC | 5 cut(s) | 17, 814, 976, 2196, 2226 |
| MflI | RGATCY | 2 cut(s) | 2269, 2275 |
| MlsI | TGGCCA | 1 cut(s) | 781 |
| MluNI | TGGCCA | 1 cut(s) | 781 |
| MlyI | GAGTC | 2 cut(s) | 1191, 1634 |
| MmeI | TCCRAC | 2 cut(s) | 1147, 1516 |
| Mox20I | TGGCCA | 1 cut(s) | 781 |
| MroI | TCCGGA | 2 cut(s) | 262, 672 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1057 |
| MscI | TGGCCA | 1 cut(s) | 781 |
| MslI | CAYNNNNRTG | 4 cut(s) | 728, 885, 913, 1887 |
| Msp20I | TGGCCA | 1 cut(s) | 781 |
| MspA1I | CMGCKG | 1 cut(s) | 974 |
| MspCI | CTTAAG | 1 cut(s) | 173 |
| MspI | CCGG | 3 cut(s) | 15, 263, 673 |
| MspR9I | CCNGG | 4 cut(s) | 864, 1563, 2213, 2256 |
| Mva1269I | GAATGC | 1 cut(s) | 799 |
| MvaI | CCWGG | 4 cut(s) | 864, 1563, 2213, 2256 |
| NheI | GCTAGC | 1 cut(s) | 1103 |
| NspI | RCATGY | 5 cut(s) | 884, 1439, 1630, 1729, 1904 |
| PaeI | GCATGC | 1 cut(s) | 1729 |
| PaeR7I | CTCGAG | 1 cut(s) | 56 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1191 |
| PctI | GAATGC | 1 cut(s) | 799 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1057 |
| PfeI | GAWTC | 5 cut(s) | 327, 355, 734, 2179, 2467 |
| PflMI | CCANNNNNTGG | 5 cut(s) | 755, 833, 854, 1976, 2175 |
| PleI | GAGTC | 2 cut(s) | 1190, 1634 |
| PmaCI | CACGTG | 1 cut(s) | 74 |
| PmlI | CACGTG | 1 cut(s) | 74 |
| PpsI | GAGTC | 2 cut(s) | 1190, 1634 |
| Ppu21I | YACGTR | 2 cut(s) | 74, 1751 |
| PpuMI | RGGWCCY | 1 cut(s) | 963 |
| Psp124BI | GAGCTC | 5 cut(s) | 63, 923, 1561, 1802, 1879 |
| Psp1406I | AACGTT | 1 cut(s) | 1057 |
| Psp5II | RGGWCCY | 1 cut(s) | 963 |
| Psp6I | CCWGG | 4 cut(s) | 862, 1561, 2211, 2254 |
| PspCI | CACGTG | 1 cut(s) | 74 |
| PspEI | GGTNACC | 1 cut(s) | 814 |
| PspFI | CCCAGC | 2 cut(s) | 748, 847 |
| PspGI | CCWGG | 4 cut(s) | 862, 1561, 2211, 2254 |
| PspOMI | GGGCCC | 1 cut(s) | 1823 |
| PspPI | GGNCC | 7 cut(s) | 169, 489, 633, 963, 1139, 1823, 1824 |
| PspPPI | RGGWCCY | 1 cut(s) | 963 |
| PspXI | VCTCGAGB | 1 cut(s) | 56 |
| PstI | CTGCAG | 4 cut(s) | 559, 583, 1417, 2341 |
| PstNI | CAGNNNCTG | 3 cut(s) | 330, 1400, 1637 |
| PsuI | RGATCY | 2 cut(s) | 2269, 2275 |
| PvuII | CAGCTG | 1 cut(s) | 974 |
| RsaI | GTAC | 4 cut(s) | 323, 838, 1739, 1749 |
| RsaNI | GTAC | 4 cut(s) | 322, 837, 1738, 1748 |
| RseI | CAYNNNNRTG | 4 cut(s) | 728, 885, 913, 1887 |
| SacI | GAGCTC | 5 cut(s) | 63, 923, 1561, 1802, 1879 |
| Sau96I | GGNCC | 7 cut(s) | 169, 489, 633, 963, 1139, 1823, 1824 |
| SchI | GAGTC | 2 cut(s) | 1191, 1634 |
| ScrFI | CCNGG | 4 cut(s) | 864, 1563, 2213, 2256 |
| SexAI | ACCWGGT | 2 cut(s) | 2211, 2254 |
| SfaNI | GCATC | 4 cut(s) | 376, 1289, 1312, 1576 |
| SfcI | CTRYAG | 5 cut(s) | 555, 579, 1392, 1413, 2337 |
| Sfr274I | CTCGAG | 1 cut(s) | 56 |
| SinI | GGWCC | 4 cut(s) | 489, 633, 963, 1139 |
| SlaI | CTCGAG | 1 cut(s) | 56 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 728, 885, 913, 1887 |
| SmlI | CTYRAG | 4 cut(s) | 56, 173, 376, 1795 |
| SmoI | CTYRAG | 4 cut(s) | 56, 173, 376, 1795 |
| SphI | GCATGC | 1 cut(s) | 1729 |
| SsiI | CCGC | 5 cut(s) | 312, 1845, 1930, 2220, 2363 |
| SspMI | CTAG | 6 cut(s) | 1104, 1229, 1272, 1326, 1605, 1944 |
| SstI | GAGCTC | 5 cut(s) | 63, 923, 1561, 1802, 1879 |
| StyD4I | CCNGG | 4 cut(s) | 862, 1561, 2211, 2254 |
| StyI | CCWWGG | 1 cut(s) | 776 |
| TaaI | ACNGT | 3 cut(s) | 637, 710, 1742 |
| TaiI | ACGT | 5 cut(s) | 76, 1060, 1287, 1534, 1753 |
| TaqI | TCGA | 7 cut(s) | 57, 353, 712, 1341, 1364, 1879, 2232 |
| TatI | WGTACW | 2 cut(s) | 321, 1737 |
| TauI | GCSGC | 3 cut(s) | 314, 1932, 2366 |
| TfiI | GAWTC | 5 cut(s) | 327, 355, 734, 2179, 2467 |
| TscAI | CASTG | 3 cut(s) | 246, 396, 920 |
| TspGWI | ACGGA | 2 cut(s) | 2171, 2250 |
| TspRI | CASTG | 3 cut(s) | 246, 396, 920 |
| Van91I | CCANNNNNTGG | 5 cut(s) | 755, 833, 854, 1976, 2175 |
| Vha464I | CTTAAG | 1 cut(s) | 173 |
| VneI | GTGCAC | 1 cut(s) | 1275 |
| VpaK11BI | GGWCC | 4 cut(s) | 489, 633, 963, 1139 |
| XapI | RAATTY | 2 cut(s) | 1817, 1867 |
| XceI | RCATGY | 5 cut(s) | 884, 1439, 1630, 1729, 1904 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1698 |
| XhoI | CTCGAG | 1 cut(s) | 56 |
| XmiI | GTMKAC | 2 cut(s) | 616, 2142 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1057 |
| XspI | CTAG | 6 cut(s) | 1104, 1229, 1272, 1326, 1605, 1944 |