Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0010197

Physical Location & Seq

Genomic Coordinates Reverse (-)

11086225 .. 11088795

Gene Structure 2571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1141900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2469 bp

ATGGCCTCCTCTGCTCTTCCTCTTCCTCTCTCCACACCCTCCCCCACCGCTCAAACCACCACACCCACCGCCCCGGACCACCTCTCCTCCCCAATCCTCCTCCTCCCAAAGCTCAAAACCCCCACCATCCGCTCCCGCCTCAGCAAACTCTGCCAGGAAGGCCAACCCCACCTTGCCCGCCAACTGTTCGACACTTTGCCTCGCCCCTCCACCGTGCTCTGGAACACCATCATCATTGGATTCATCTGCAACAACATGCCCAATGAAGCCCTCTTGTTCTACTCCCAGATGAAATCCGCCTCTCCCGGCACCAAGGCCGACCCTTACACTTACTCTTCTACCCTCAAAGCCTGCGCGGACACGCGCAATTTCAAGATGGGTAAAGCCCTGCATTGCCATGTTATTCGGTGTCTTCCGAATCCCAGTAGGATTGTGTGCAATTCGCTTTTGAATATGTACTCTGCTTGTTATAATGACTTTCATTATTCACAGTACGATTTAGTGCGTAGGGTGTTTGATACGATGCGCAAGAGGAATGTGGTTGCTTGGAATACGCTGGTTTCTTGGTATGTTAAAACCGAAAGATATGCAGAAGCAGTGAAGCAGTTTAGGATGATGATGGGAATGAGAATAACACCGAGTGCTGTCAGTTTTGTCAATGTTTTCCCTGCGCTTTCCGCTATGGGAGACTATAAGAACGCGAATGTTCTACACGGTATGCTTCTTAGGTTGGGTGGGGAATACGTGACTGACTTGTTTGTTGTGAGCTCGGCAATATTTATGTATGCCGAGCTTGGTTGCCTTGAATATGCTAGGAAGATTTTTTACCATTGTTCGGAGAGAAATACAGAGATTTGGAACACTATGATCGGTGCATATGTTCAAAACAACCGTCCTATTGAAGCGATCGACCTCTTCTTTCAAGCTGTAAACTCAGAAGTGGCTATTCTTGATGAGGTGACTTTCCTATCAGTTTTAACTGCATGTTCACAGATGCAACAGTTGGAATTAGCCGGACAGCTGCATGCTTTTATCATCAAGCATTTGAGATTGATGCCCGTTATTTTACTCAATGCGACTATCGTAATGTATTCAAGGTGCAATTCTGTTGACATGTCATTCAAAATTTTTCATAAGATGCCTGAGAGGGATGTTGTTTCATGGAATACGATGATTTCTGCATTCGTGCAAAATGGTTTAGATGATGAAGCTTTGATGCTTGTTTATGAGATGCAAAAGCAAAGGTTCATGATTGATTCGGTAACTGTAACTGCTCTACTTTCGGCTTCATCAAATCTTAGAAATCCAGATATTGGAAAGCAGACTCATGCTTATCTTATTAGGCATGACATACAATTTGAGGGGATGGACAGTTATCTCATCGATATGTATGCTAAATCTGGCTCAGTAAGGATCGCAGAACGGGTTTTCAAAAAAGACTACAGCCGTGATAGAGATCAGGCTACTTGGAATTCTATGATTGCTGGGTACACACAGAATGGGCTATCTGAAGAAGCTTTCTTTGTCTTTAGGCAGATGCTTGAGCAAAATCTAATCCCAAATGCTGTGACCTTAGCATCGGTTCTCCCAGCTTGTAATATAGTGGGAAACATAGATATGGGTAAGCAACTCCATGGGTTCTCTATCCGCCACTACCTTGACCAAAACGTCTTCGTGGGATCTGCTCTAATTGACATGTATTCCAAATGTGGTGCAGTCACTTATGCTGAAAATGTTTTCGCTGGATCCCATGAGAAGAACTCTGTCACATATACCACAATGATACTGGGCTACGGTCAGCATGGAATGGGTGAGAGAGCTCTCTCTTTGTTTCACTCAATGCAGAAATCTGGCATTGCACCGGATGCCATAACCTTTGTTGCAGTCTTGTCTGCCTGCAGTTATGCTGGTTTGGTTAACGAAGGTCTTTCGATATATGATTCAATGAAAAGGGAATACAATATTGAACCACTAACGGCACACTATTGCTGTATAGCAGACATGTTAGGGAGGGTTGGGAGAATGGTTGAAGCCTACGAGTTTGTCAAAGGGTTGGGCGAAGAGGGTGATGCGATGGAAATTTGGGGCTCACTTCTTGGGGCGTGCAGAATTCATAAACATTTTGAATTGGGAAAGATTGTTGCTGGGAAATTGCTTGAACTAGAGGCAGCAAATGGCAAAACGGGCTACCATGTTTTACTCTCAAATATGTATGCCGAGGAAGGCAAGTGGGAAAACGTGGATAATGTGAGGAAACAAATGAGGGAAAAGGGTTTGAGGAAGGAGACTGGATGTAGTTGGATTGATATTAGCGGTTTTTTGAACTGTTTCACATCTAGGGACCAAAACCATCCTCAGGGTGATGAGATATATGATATATTGGAGGAATTGACTGTGAAGATGAAAGATACTGGTTATAGGCCTTCTCTCAATTCTTCCTTAGATGCAATCTTGGAACCTTATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

823

Amino Acids

92.51

Weight (kDa)

6.53

Isoelectric Point (pI)

41.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	69 - 119	6.2e-08	PPR repeat family
PPR_2	PF13041	178 - 224	1e-06	PPR repeat family
PPR_2	PF13041	383 - 429	2.2e-09	PPR repeat family
PPR	PF01535	386 - 414	4.2e-07	PPR repeat
PPR_2	PF13041	486 - 532	6.1e-09	PPR repeat family
PPR	PF01535	489 - 517	8.4e-08	PPR repeat
PPR_2	PF13041	586 - 633	6.1e-13	PPR repeat family
PPR	PF01535	589 - 619	7.3e-09	PPR repeat
E_motif	PF20431	705 - 769	9.5e-17	E motif
Eplus_motif	PF20430	777 - 801	3.2e-06	E+ motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010197)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22150 AT3G22150
fragaria_vesca	FvH4_5g30430 FvH4_5g30430
malus_domestica	MD09G1140900.v1.1 MD09G1141400.v1.1 MD09G1141900.v1.1
prunus_persica	Prupe.3G184500_v2.0.a1
pyrus_communis	pycom09g06220 pycom17g12210
rosa_chinensis	RchiOBHm_Chr2g0153281
rosa_laevigata	RLG00000020690
rosa_multiflora	Rmu_sc0000442.1_g000012 Rmu_sc0004856.1_g000015
rosa_roxburghii	Rroxscaffold_2G00095060
rosa_rugosa	Rorug02G0437900
rosa_samantha	Rh2AG500900 Rh2BG512400 Rh2CG487100 Rh2DG524100
rosa_wichuraiana	Rw2G041110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	471
AasI	GACNNNNNNGTC	1 cut(s)	1667
Acc16I	TGCGCA	1 cut(s)	527
AccB1I	GGYRCC	1 cut(s)	308
AccB7I	CCANNNNNTGG	1 cut(s)	1313
AccBSI	CCGCTC	2 cut(s)	50, 132
AccII	CGCG	3 cut(s)	356, 364, 701
AclWI	GGATC	4 cut(s)	1421, 1687, 1740, 1753
AcsI	RAATTY	4 cut(s)	1125, 1471, 2079, 2109
AcuI	CTGAAG	1 cut(s)	1530
AdeI	CACNNNGTG	1 cut(s)	641
AfaI	GTAC	3 cut(s)	458, 494, 1490
AfiI	CCNNNNNNNGG	4 cut(s)	219, 835, 1313, 2356
AflIII	ACRYGT	3 cut(s)	1113, 1695, 2001
AjnI	CCWGG	1 cut(s)	153
AluBI	AGCT	9 cut(s)	112, 768, 793, 926, 1021, 1211, 1517, 1592, 1820
AluI	AGCT	9 cut(s)	112, 768, 793, 926, 1021, 1211, 1517, 1592, 1820
Alw21I	GWGCWC	3 cut(s)	219, 770, 1822
Alw26I	GTCTC	2 cut(s)	681, 2279
AlwI	GGATC	4 cut(s)	1421, 1687, 1740, 1753
AoxI	GGCC	4 cut(s)	3, 160, 315, 2420
ApeKI	GCWGC	2 cut(s)	1021, 2168
ApoI	RAATTY	4 cut(s)	1125, 1471, 2079, 2109
ArsI	GACNNNNNNTTYG	4 cut(s)	877, 909, 1340, 1372
Asp700I	GAANNNNTTC	1 cut(s)	2327
AspLEI	GCGC	4 cut(s)	356, 366, 528, 673
AspS9I	GGNCC	2 cut(s)	76, 2341
AsuC2I	CCSGG	2 cut(s)	74, 306
AsuHPI	GGTGA	4 cut(s)	970, 1823, 2078, 2372
AvaII	GGWCC	2 cut(s)	76, 2341
AxyI	CCTNAGG	1 cut(s)	2355
BamHI	GGATCC	1 cut(s)	1745
BanI	GGYRCC	1 cut(s)	308
BanII	GRGCYC	3 cut(s)	770, 1822, 2090
BarI	GAAGNNNNNNTAC	2 cut(s)	809, 841
BbsI	GAAGAC	2 cut(s)	404, 1663
Bbv12I	GWGCWC	3 cut(s)	219, 770, 1822
BbvCI	CCTCAGC	1 cut(s)	140
BbvI	GCAGC	2 cut(s)	1008, 2180
BccI	CCATC	7 cut(s)	134, 236, 370, 613, 1360, 2068, 2358
BceAI	ACGGC	2 cut(s)	1431, 1992
BcgI	CGANNNNNNTGC	4 cut(s)	569, 603, 1373, 1407
BciT130I	CCWGG	1 cut(s)	155
BcnI	CCSGG	2 cut(s)	74, 306
BcoDI	GTCTC	2 cut(s)	681, 2279
BfaI	CTAG	3 cut(s)	813, 2162, 2337
BfmI	CTRYAG	2 cut(s)	1441, 1897
BglI	GCCNNNNNGGC	1 cut(s)	159
BisI	GCNGC	2 cut(s)	1022, 2169
BlsI	GCNGC	2 cut(s)	1023, 2170
Bme1390I	CCNGG	3 cut(s)	74, 155, 306
Bme18I	GGWCC	2 cut(s)	76, 2341
BmgT120I	GGNCC	2 cut(s)	76, 2341
BmiI	GGNNCC	4 cut(s)	310, 1747, 2342, 2457
BmrFI	CCNGG	3 cut(s)	74, 155, 306
BmrI	ACTGGG	2 cut(s)	417, 1796
BmuI	ACTGGG	2 cut(s)	417, 1796
BpiI	GAAGAC	2 cut(s)	404, 1663
BplI	GAGNNNNNCTC	2 cut(s)	1745, 1777
Bpu10I	CCTNAGC	2 cut(s)	140, 1573
BpuEI	CTTGAG	1 cut(s)	1562
BpuMI	CCSGG	2 cut(s)	74, 306
Bsa29I	ATCGAT	1 cut(s)	1383
BsaAI	YACGTR	1 cut(s)	745
BsaBI	GATNNNNATC	1 cut(s)	1455
BsaJI	CCNNGG	4 cut(s)	72, 312, 1633, 2217
BsaWI	WCCGGW	1 cut(s)	1861
BsaXI	ACNNNNNCTCC	4 cut(s)	68, 71, 98, 101
Bsc4I	CCNNNNNNNGG	4 cut(s)	219, 835, 1313, 2356
Bse1I	ACTGG	4 cut(s)	423, 1791, 2293, 2416
Bse21I	CCTNAGG	1 cut(s)	2355
Bse3DI	GCAATG	2 cut(s)	391, 1854
Bse8I	GATNNNNATC	1 cut(s)	1455
BseBI	CCWGG	1 cut(s)	155
BseCI	ATCGAT	1 cut(s)	1383
BseDI	CCNNGG	4 cut(s)	72, 312, 1633, 2217
BseGI	GGATG	7 cut(s)	126, 618, 1156, 1371, 1870, 2297, 2350
BseJI	GATNNNNATC	1 cut(s)	1455
BseLI	CCNNNNNNNGG	4 cut(s)	219, 835, 1313, 2356
BseMI	GCAATG	2 cut(s)	391, 1854
BseMII	CTCAG	5 cut(s)	154, 948, 1134, 1419, 2369
BseNI	ACTGG	4 cut(s)	423, 1791, 2293, 2416
BseRI	GAGGAG	3 cut(s)	76, 89, 92
BseXI	GCAGC	2 cut(s)	1008, 2180
BseYI	CCCAGC	3 cut(s)	1484, 1588, 2144
BsgI	GTGCAG	2 cut(s)	1734, 2125
Bsh1236I	CGCG	3 cut(s)	356, 364, 701
Bsh1285I	CGRYCG	1 cut(s)	909
BshFI	GGCC	4 cut(s)	5, 162, 317, 2422
BshNI	GGYRCC	1 cut(s)	308
BshVI	ATCGAT	1 cut(s)	1383
BsiEI	CGRYCG	1 cut(s)	909
BsiHKAI	GWGCWC	3 cut(s)	219, 770, 1822
BsiSI	CCGG	4 cut(s)	74, 306, 1014, 1862
BslFI	GGGAC	1 cut(s)	2354
BslI	CCNNNNNNNGG	4 cut(s)	219, 835, 1313, 2356
BsmAI	GTCTC	2 cut(s)	681, 2279
BsmFI	GGGAC	1 cut(s)	2354
BsmI	GAATGC	1 cut(s)	1181
BsnI	GGCC	4 cut(s)	5, 162, 317, 2422
Bsp1286I	GDGCHC	4 cut(s)	219, 770, 1822, 2090
Bsp143I	GATC	6 cut(s)	867, 906, 1413, 1456, 1679, 1745
Bsp19I	CCATGG	1 cut(s)	1633
BspANI	GGCC	4 cut(s)	5, 162, 317, 2422
BspCNI	CTCAG	5 cut(s)	153, 947, 1135, 1418, 2368
BspDI	ATCGAT	1 cut(s)	1383
BspFNI	CGCG	3 cut(s)	356, 364, 701
BspHI	TCATGA	1 cut(s)	1248
BspLI	GGNNCC	4 cut(s)	310, 1747, 2342, 2457
BspMAI	CTGCAG	1 cut(s)	1901
BspPI	GGATC	4 cut(s)	1421, 1687, 1740, 1753
BspQI	GCTCTTC	1 cut(s)	21
BspT107I	GGYRCC	1 cut(s)	308
BsrBI	CCGCTC	2 cut(s)	50, 132
BsrDI	GCAATG	2 cut(s)	391, 1854
BsrI	ACTGG	4 cut(s)	423, 1791, 2293, 2416
BssECI	CCNNGG	4 cut(s)	72, 312, 1633, 2217
BssMI	GATC	6 cut(s)	867, 906, 1413, 1456, 1679, 1745
BssT1I	CCWWGG	2 cut(s)	312, 1633
Bst2UI	CCWGG	1 cut(s)	155
Bst6I	CTCTTC	5 cut(s)	21, 27, 340, 920, 2055
BstAPI	GCANNNNNTGC	2 cut(s)	150, 1865
BstBAI	YACGTR	1 cut(s)	745
BstC8I	GCNNGC	5 cut(s)	178, 352, 1026, 1897, 2104
BstDEI	CTNAG	9 cut(s)	140, 725, 934, 1143, 1298, 1405, 1573, 2355, 2440
BstDSI	CCRYGG	1 cut(s)	1633
BstF5I	GGATG	7 cut(s)	126, 618, 1156, 1371, 1870, 2297, 2350
BstFNI	CGCG	3 cut(s)	356, 364, 701
BstHHI	GCGC	4 cut(s)	356, 366, 528, 673
BstKTI	GATC	6 cut(s)	870, 909, 1416, 1459, 1682, 1748
BstMAI	GTCTC	2 cut(s)	681, 2279
BstMBI	GATC	6 cut(s)	867, 906, 1413, 1456, 1679, 1745
BstMCI	CGRYCG	1 cut(s)	909
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 150, 159, 677, 1865, 2184
BstNI	CCWGG	1 cut(s)	155
BstNSI	RCATGY	6 cut(s)	259, 987, 1028, 1117, 1699, 2005
BstSCI	CCNGG	3 cut(s)	72, 153, 304
BstSFI	CTRYAG	2 cut(s)	1441, 1897
BstUI	CGCG	3 cut(s)	356, 364, 701
BstV1I	GCAGC	2 cut(s)	1008, 2180
BstV2I	GAAGAC	2 cut(s)	404, 1663
BstX2I	RGATCY	2 cut(s)	1679, 1745
BstYI	RGATCY	2 cut(s)	1679, 1745
Bsu15I	ATCGAT	1 cut(s)	1383
Bsu36I	CCTNAGG	1 cut(s)	2355
BsuRI	GGCC	4 cut(s)	5, 162, 317, 2422
BsuTUI	ATCGAT	1 cut(s)	1383
BtgI	CCRYGG	1 cut(s)	1633
BtgZI	GCGATG	1 cut(s)	2087
BtsCI	GGATG	7 cut(s)	126, 618, 1156, 1371, 1870, 2297, 2350
BtsI	GCAGTG	1 cut(s)	603
BtsIMutI	CAGTG	1 cut(s)	603
Cac8I	GCNNGC	5 cut(s)	178, 352, 1026, 1897, 2104
CciI	TCATGA	1 cut(s)	1248
CfoI	GCGC	4 cut(s)	356, 366, 528, 673
Cfr13I	GGNCC	2 cut(s)	76, 2341
ClaI	ATCGAT	1 cut(s)	1383
Csp6I	GTAC	3 cut(s)	457, 493, 1489
CviQI	GTAC	3 cut(s)	457, 493, 1489
DdeI	CTNAG	9 cut(s)	140, 725, 934, 1143, 1298, 1405, 1573, 2355, 2440
DpnI	GATC	6 cut(s)	869, 908, 1415, 1458, 1681, 1747
DpnII	GATC	6 cut(s)	867, 906, 1413, 1456, 1679, 1745
DraIII	CACNNNGTG	1 cut(s)	641
DrdI	GACNNNNNNGTC	1 cut(s)	1667
DseDI	GACNNNNNNGTC	1 cut(s)	1667
Eam1104I	CTCTTC	5 cut(s)	21, 27, 340, 920, 2055
EarI	CTCTTC	5 cut(s)	21, 27, 340, 920, 2055
EciI	GGCGGA	2 cut(s)	286, 1637
Ecl136II	GAGCTC	2 cut(s)	768, 1820
Eco130I	CCWWGG	2 cut(s)	312, 1633
Eco147I	AGGCCT	1 cut(s)	2422
Eco24I	GRGCYC	3 cut(s)	770, 1822, 2090
Eco47I	GGWCC	2 cut(s)	76, 2341
Eco53kI	GAGCTC	2 cut(s)	768, 1820
Eco57I	CTGAAG	1 cut(s)	1530
Eco81I	CCTNAGG	1 cut(s)	2355
EcoICRI	GAGCTC	2 cut(s)	768, 1820
EcoRI	GAATTC	2 cut(s)	1471, 2109
EcoRII	CCWGG	1 cut(s)	153
EcoT14I	CCWWGG	2 cut(s)	312, 1633
EcoT38I	GRGCYC	3 cut(s)	770, 1822, 2090
ErhI	CCWWGG	2 cut(s)	312, 1633
FaqI	GGGAC	1 cut(s)	2354
FauI	CCCGC	2 cut(s)	143, 185
FauNDI	CATATG	1 cut(s)	877
Fnu4HI	GCNGC	2 cut(s)	1022, 2169
FokI	GGATG	7 cut(s)	113, 625, 1163, 1378, 1877, 2304, 2337
FriOI	GRGCYC	3 cut(s)	770, 1822, 2090
Fsp4HI	GCNGC	2 cut(s)	1022, 2169
FspBI	CTAG	3 cut(s)	813, 2162, 2337
FspI	TGCGCA	1 cut(s)	527
GlaI	GCGC	4 cut(s)	355, 365, 527, 672
GluI	GCNGC	2 cut(s)	1022, 2169
GsaI	CCCAGC	3 cut(s)	1488, 1592, 2148
HaeIII	GGCC	4 cut(s)	5, 162, 317, 2422
HapII	CCGG	4 cut(s)	74, 306, 1014, 1862
HhaI	GCGC	4 cut(s)	356, 366, 528, 673
Hin6I	GCGC	4 cut(s)	354, 364, 526, 671
HinP1I	GCGC	4 cut(s)	354, 364, 526, 671
HincII	GTYRAC	2 cut(s)	1111, 1918
HindII	GTYRAC	2 cut(s)	1111, 1918
HindIII	AAGCTT	2 cut(s)	1209, 1515
HinfI	GANTC	5 cut(s)	240, 418, 1256, 1324, 1940
HpaI	GTTAAC	1 cut(s)	1918
HpaII	CCGG	4 cut(s)	74, 306, 1014, 1862
HphI	GGTGA	4 cut(s)	970, 1823, 2078, 2372
Hpy166II	GTNNAC	5 cut(s)	931, 989, 1111, 1491, 1918
Hpy188I	TCNGA	4 cut(s)	417, 838, 937, 1510
Hpy188III	TCNNGA	5 cut(s)	220, 373, 950, 1249, 1307
Hpy8I	GTNNAC	5 cut(s)	931, 989, 1111, 1491, 1918
HpyAV	CCTTC	5 cut(s)	152, 1916, 2216, 2275, 2433
HpyCH4IV	ACGT	3 cut(s)	744, 1668, 2238
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 150, 159, 677, 1865, 2184
HpyF3I	CTNAG	9 cut(s)	140, 725, 934, 1143, 1298, 1405, 1573, 2355, 2440
HpySE526I	ACGT	3 cut(s)	744, 1668, 2238
HspAI	GCGC	4 cut(s)	354, 364, 526, 671
KspAI	GTTAAC	1 cut(s)	1918
Kzo9I	GATC	6 cut(s)	867, 906, 1413, 1456, 1679, 1745
LguI	GCTCTTC	1 cut(s)	21
LmnI	GCTCC	1 cut(s)	137
Lsp1109I	GCAGC	2 cut(s)	1008, 2180
MaeI	CTAG	3 cut(s)	813, 2162, 2337
MaeII	ACGT	3 cut(s)	744, 1668, 2238
MaeIII	GTNAC	7 cut(s)	745, 958, 1261, 1267, 1567, 1717, 1765
MalI	GATC	6 cut(s)	869, 908, 1415, 1458, 1681, 1747
MbiI	CCGCTC	2 cut(s)	50, 132
MboI	GATC	6 cut(s)	867, 906, 1413, 1456, 1679, 1745
MflI	RGATCY	2 cut(s)	1679, 1745
MhlI	GDGCHC	4 cut(s)	219, 770, 1822, 2090
MlyI	GAGTC	1 cut(s)	1318
MmeI	TCCRAC	2 cut(s)	984, 2279
MroXI	GAANNNNTTC	1 cut(s)	2327
MseI	TTAA	3 cut(s)	573, 977, 1917
MslI	CAYNNNNRTG	3 cut(s)	396, 1385, 1616
MspA1I	CMGCKG	1 cut(s)	1021
MspI	CCGG	4 cut(s)	74, 306, 1014, 1862
MspR9I	CCNGG	3 cut(s)	74, 155, 306
Mva1269I	GAATGC	1 cut(s)	1181
MvaI	CCWGG	1 cut(s)	155
MvnI	CGCG	3 cut(s)	356, 364, 701
MwoI	GCNNNNNNNGC	6 cut(s)	11, 150, 159, 677, 1865, 2184
NciI	CCSGG	2 cut(s)	74, 306
NcoI	CCATGG	1 cut(s)	1633
NdeI	CATATG	1 cut(s)	877
NdeII	GATC	6 cut(s)	867, 906, 1413, 1456, 1679, 1745
NlaIV	GGNNCC	4 cut(s)	310, 1747, 2342, 2457
NmeAIII	GCCGAG	3 cut(s)	749, 814, 2242
NmuCI	GTSAC	5 cut(s)	745, 958, 1567, 1717, 1765
NsbI	TGCGCA	1 cut(s)	527
NspI	RCATGY	6 cut(s)	259, 987, 1028, 1117, 1699, 2005
PaeI	GCATGC	1 cut(s)	1028
PagI	TCATGA	1 cut(s)	1248
PceI	AGGCCT	1 cut(s)	2422
PciI	ACATGT	3 cut(s)	1113, 1695, 2001
PciSI	GCTCTTC	1 cut(s)	21
PctI	GAATGC	1 cut(s)	1181
PdmI	GAANNNNTTC	1 cut(s)	2327
PfeI	GAWTC	4 cut(s)	240, 418, 1256, 1940
PflMI	CCANNNNNTGG	1 cut(s)	1313
PkrI	GCNGC	2 cut(s)	1023, 2170
Ple19I	CGATCG	1 cut(s)	909
PleI	GAGTC	1 cut(s)	1318
PpsI	GAGTC	1 cut(s)	1318
Ppu21I	YACGTR	1 cut(s)	745
PscI	ACATGT	3 cut(s)	1113, 1695, 2001
PsiI	TTATAA	1 cut(s)	471
Psp124BI	GAGCTC	2 cut(s)	770, 1822
Psp6I	CCWGG	1 cut(s)	153
PspFI	CCCAGC	3 cut(s)	1484, 1588, 2144
PspGI	CCWGG	1 cut(s)	153
PspN4I	GGNNCC	4 cut(s)	310, 1747, 2342, 2457
PspPI	GGNCC	2 cut(s)	76, 2341
PstI	CTGCAG	1 cut(s)	1901
PsuI	RGATCY	2 cut(s)	1679, 1745
PvuI	CGATCG	1 cut(s)	909
PvuII	CAGCTG	1 cut(s)	1021
RsaI	GTAC	3 cut(s)	458, 494, 1490
RsaNI	GTAC	3 cut(s)	457, 493, 1489
RseI	CAYNNNNRTG	3 cut(s)	396, 1385, 1616
SacI	GAGCTC	2 cut(s)	770, 1822
SapI	GCTCTTC	1 cut(s)	21
SaqAI	TTAA	3 cut(s)	573, 977, 1917
SatI	GCNGC	2 cut(s)	1022, 2169
Sau3AI	GATC	6 cut(s)	867, 906, 1413, 1456, 1679, 1745
Sau96I	GGNCC	2 cut(s)	76, 2341
SchI	GAGTC	1 cut(s)	1318
ScrFI	CCNGG	3 cut(s)	74, 155, 306
SduI	GDGCHC	4 cut(s)	219, 770, 1822, 2090
SfcI	CTRYAG	2 cut(s)	1441, 1897
SinI	GGWCC	2 cut(s)	76, 2341
SmiMI	CAYNNNNRTG	3 cut(s)	396, 1385, 1616
SmlI	CTYRAG	1 cut(s)	1541
SmoI	CTYRAG	1 cut(s)	1541
SphI	GCATGC	1 cut(s)	1028
SseBI	AGGCCT	1 cut(s)	2422
SspI	AATATT	2 cut(s)	777, 1963
SspMI	CTAG	3 cut(s)	813, 2162, 2337
SstI	GAGCTC	2 cut(s)	770, 1822
StuI	AGGCCT	1 cut(s)	2422
StyD4I	CCNGG	3 cut(s)	72, 153, 304
StyI	CCWWGG	2 cut(s)	312, 1633
TaiI	ACGT	3 cut(s)	747, 1671, 2241
TaqI	TCGA	4 cut(s)	189, 909, 1383, 1931
TatI	WGTACW	1 cut(s)	456
TfiI	GAWTC	4 cut(s)	240, 418, 1256, 1940
Tru1I	TTAA	3 cut(s)	573, 977, 1917
Tru9I	TTAA	3 cut(s)	573, 977, 1917
TscAI	CASTG	1 cut(s)	603
TseFI	GTSAC	5 cut(s)	745, 958, 1567, 1717, 1765
TseI	GCWGC	2 cut(s)	1021, 2168
Tsp45I	GTSAC	5 cut(s)	745, 958, 1567, 1717, 1765
TspRI	CASTG	1 cut(s)	603
Van91I	CCANNNNNTGG	1 cut(s)	1313
VpaK11BI	GGWCC	2 cut(s)	76, 2341
XapI	RAATTY	4 cut(s)	1125, 1471, 2079, 2109
XceI	RCATGY	6 cut(s)	259, 987, 1028, 1117, 1699, 2005
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1783
XmnI	GAANNNNTTC	1 cut(s)	2327
XspI	CTAG	3 cut(s)	813, 2162, 2337

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.