Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010197

Physical Location & Seq

Genomic Coordinates Forward (+)

70659424 .. 70663293

Gene Structure 3870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ52236

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2460 bp

ATGGCTTCCTCTGCTCTTCCCCCACCTCTCTCCACGCCCACTCAAACCCCCATACCCAACTCTCCTCCTCACAATCTCTCATCCCGAACCTTCCCACTGCCAACTCTCGAAACCGCCACAATTCGCTCCCGCCTAAGCAGTCTCTGCCAAGAAGGCCAACCCCACCTTGCCCGCCAACTGTTCGACACTTTGCCTCGCCCAACTACCCTTCTCTGGAACACCATCATCATTGGCTTCATCTGCAACAACATGCCCACTGAAGCCCTCTTGTTCTATTCCCACATGAAAAACTCCTCCCCCAGCACCAAATGTGACCCTTACACTTACTCTTCCACCCTCAAAGCCTGCGCCGATACCCGCAATTTCAACATTGGCAAGGCTGTGCATTGTCACATTCTTCGGTGCCTTCCGAACCCAAGTATGATTGTGCAGAATTCGCTAATGAATATGTACTCTTCCTGCATTGGAAGCTTTGATCATGCCAAGTATGACTTAGTACGCAAGGTGTTTGACACAATGCGCGAGAGAAATGTGGTTGCGTGGAACACGTTGGTTTCGTGGTATTTTAAGACTGAGAGGTATCGAGGAGCGGTTAAGCAGTTTAGGATGATGATGAGGATGAGAATAGCCCCAAGTGCTGTGAGTTTTGTCAATGTTTTCCCTGCTTTATCCGCCGTGAGAGACTATAAAAATGCCAATGTTTTATATGGTTTGGTTGTTAGATTTGGCGGTGAGTATGTGAATGACTTGTTTGTTGTAAGCTCGGCGATATTTATGTATGCTGAGCTTGGTTGCCTTGATTATGCTAGGAAGATTTTCGACCGTTGTTTGGGGAGAAACACAGAGATATGGAACACCATGATTGGTGGGTATGTTCAGAATAATCTTCCTGGGGAAGCAATCAGCCTTTTCTTTCAAGCCATACGATCAGATCAGGCTGTTCTTGATGAAGTGACTTTTCTTTCGGTTTTAACTGCATGTTCACAGTTGCAACAGTTGGAACTAGCTGGACAGTTGCATGCTTTTATTACTAAGCATTTCAGAGTGATGCCTGTTATTTTACTAAATGCAATTATGGTGATGTACTCGAGGTGCAATTCTATTGAGACGTCATTTAAGTTTTTTCATAAGATGCCGGAGAGGGATGCTGTTTCATGGAATACCATGATCTCTGTGTTTTCTCAGAGTGGCTTGGATGATGAGGCTTTAATGCTTGTTTATGAGATGCAAAAACAAAACTTTTTGATTGATTCTGTAACTGTAACTGCTCTACTTTCGGCTGCATCAAATCTTAGAAACATAGATGTTGGACAGCAGACACATGCTTATATTATTAGGCATGGAATAGAATTTGAGGGAATGGAAAGTTATCTCATAGACATGTATGCCAAATCTGGTTCAGTCAGGATTGCAGAACGACTTTTCAAAAAGAACTATATTGTTGATAGAGATCATGCTACTTGGAATTCTATGGTTACAGGGTACACACAGAACGGCATGATTGAAGAAGCTTTTGTAGTTTTTAGGAAAATGCTGGAGCAGAAGCTAATACCAAATGCTGTGACCTTAGCATCAATTTTCCCTGCTTGCAATCCAGTGGGGAACATAGATATGGGTAAGCAACTCCATGGGTTGTCTTTTCGTCACTACCTTGACCGAGACGTCTTCGTGGGAACTGCTCTAATTGACATGTACTCAAAATGTGGTGCACTAACTTATGCTGAAAATGTGTTTTTTGAAACCCATGAAAAGAATTCTGTCACATACACCACAATGATATTGGGCTATGGCCAACATGGAATGGGTCAGAAAGCTGTGTCTTTGTTTCACTCAATGGAGAGATCTGGCATTGTACCTGATGCGGTTACCTTTGTTGCAGTCTTGTCTGCTTGCAGTTATGCTGGTTTGGTTGATGAAGGTCTTTCTTTATATGATTCAATGAAAATGGAGTACAACATAAAATCATTAACTGCACATTATTGTTGTATAGCGGACATGTTAGGGAGGGTTGGAAAAGTAGTTGAAGCATACGAGTTTGTTATAGGGTTGGGTGAAGAGGGTTACGTGATAGAAATTTGGGGATCACTTCTTGGTGCATGCAGAATTCATAAACAATTTGAATTGGGCAAGATTGTTGCTGATAAATTGCTTGAAATAAAGGCTGCTACTGTCAAGACAGGCTACCATGTTTTGCTCTCAAATATGTATGCTGAGGAAGGAAAGTGGGAAATTGTTGATAAAATGAGAAAACAAATGAAGGAGAAAGGTTTGAAGAAGGAGCCTGGCTGTAGTTGGATTGAGATTACTGGTTTCCTGAACTGTTTCATTTCTAGGGACCAAAAGCACCCTCAGTGCAGTGAGATATATGGTATGTTGGCGGAGTTGACTATGATGATGAAAGAAGCTGGTTATAGGCCTTCTCTCAATTCCCATCTAGATGCAATTTTGGAACCTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

819

Amino Acids

92.38

Weight (kDa)

7.53

Isoelectric Point (pI)

41.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	67 - 117	9.4e-06	PPR repeat family
PPR_2	PF13041	176 - 221	2.7e-07	PPR repeat family
PPR_2	PF13041	382 - 427	3e-08	PPR repeat family
PPR	PF01535	384 - 413	1.9e-06	PPR repeat
PPR_1	PF12854	483 - 511	1e-05	PPR repeat
PPR_2	PF13041	484 - 530	3.3e-09	PPR repeat family
PPR	PF01535	487 - 514	6.8e-08	PPR repeat
PPR_2	PF13041	584 - 631	9.7e-13	PPR repeat family
PPR	PF01535	587 - 617	1.3e-08	PPR repeat
E_motif	PF20431	703 - 767	2e-18	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010197)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22150 AT3G22150
fragaria_vesca	FvH4_5g30430 FvH4_5g30430
malus_domestica	MD09G1140900.v1.1 MD09G1141400.v1.1 MD09G1141900.v1.1
prunus_persica	Prupe.3G184500_v2.0.a1
pyrus_communis	pycom09g06220 pycom17g12210
rosa_chinensis	RchiOBHm_Chr2g0153281
rosa_laevigata	RLG00000020690
rosa_multiflora	Rmu_sc0000442.1_g000012 Rmu_sc0004856.1_g000015
rosa_roxburghii	Rroxscaffold_2G00095060
rosa_rugosa	Rorug02G0437900
rosa_samantha	Rh2AG500900 Rh2BG512400 Rh2CG487100 Rh2DG524100
rosa_wichuraiana	Rw2G041110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1661
AatII	GACGTC	2 cut(s)	1112, 1665
AccB1I	GGYRCC	1 cut(s)	402
AccBSI	CCGCTC	1 cut(s)	590
AccII	CGCG	1 cut(s)	522
AclWI	GGATC	1 cut(s)	2089
AcoI	YGGCCR	1 cut(s)	1789
AcsI	RAATTY	6 cut(s)	433, 1349, 1465, 1753, 2073, 2103
AcuI	CTGAAG	1 cut(s)	279
AcyI	GRCGYC	2 cut(s)	1109, 1662
AfaI	GTAC	7 cut(s)	452, 498, 1085, 1484, 1694, 1854, 1952
AfiI	CCNNNNNNNGG	2 cut(s)	213, 829
AflIII	ACRYGT	4 cut(s)	546, 1380, 1689, 1995
AjnI	CCWGG	2 cut(s)	889, 2281
AluBI	AGCT	8 cut(s)	471, 762, 787, 1007, 1511, 1546, 1814, 2405
AluI	AGCT	8 cut(s)	471, 762, 787, 1007, 1511, 1546, 1814, 2405
Alw21I	GWGCWC	1 cut(s)	1711
Alw26I	GTCTC	4 cut(s)	146, 675, 1100, 1653
Alw44I	GTGCAC	1 cut(s)	1707
AlwI	GGATC	1 cut(s)	2089
AlwNI	CAGNNNCTG	1 cut(s)	144
Ama87I	CYCGRG	1 cut(s)	1087
AoxI	GGCC	3 cut(s)	154, 1789, 2414
ApaLI	GTGCAC	1 cut(s)	1707
ApeKI	GCWGC	2 cut(s)	1280, 2162
ApoI	RAATTY	6 cut(s)	433, 1349, 1465, 1753, 2073, 2103
ArsI	GACNNNNNNTTYG	2 cut(s)	946, 978
Asp700I	GAANNNNTTC	2 cut(s)	815, 2321
AspLEI	GCGC	2 cut(s)	350, 522
AspS9I	GGNCC	1 cut(s)	2335
AsuHPI	GGTGA	3 cut(s)	743, 1090, 2063
AvaI	CYCGRG	1 cut(s)	1087
AvaII	GGWCC	1 cut(s)	2335
BaeGI	GKGCMC	1 cut(s)	1711
BalI	TGGCCA	1 cut(s)	1791
BanI	GGYRCC	1 cut(s)	402
BbsI	GAAGAC	1 cut(s)	1657
Bbv12I	GWGCWC	1 cut(s)	1711
BbvCI	CCTCAGC	1 cut(s)	2211
BbvI	GCAGC	2 cut(s)	1267, 2149
BccI	CCATC	2 cut(s)	230, 2439
BceAI	ACGGC	2 cut(s)	659, 1510
BciT130I	CCWGG	2 cut(s)	891, 2283
BclI	TGATCA	1 cut(s)	475
BcoDI	GTCTC	4 cut(s)	146, 675, 1100, 1653
BfaI	CTAG	4 cut(s)	807, 1004, 2331, 2435
BfmI	CTRYAG	1 cut(s)	2287
BglI	GCCNNNNNGGC	1 cut(s)	153
BglII	AGATCT	1 cut(s)	1841
BisI	GCNGC	2 cut(s)	1281, 2163
BlpI	GCTNAGC	1 cut(s)	783
BlsI	GCNGC	2 cut(s)	1282, 2164
Bme1390I	CCNGG	2 cut(s)	891, 2283
Bme18I	GGWCC	1 cut(s)	2335
BmeT110I	CYCGRG	1 cut(s)	1087
BmgT120I	GGNCC	1 cut(s)	2335
BmiI	GGNNCC	4 cut(s)	404, 2280, 2336, 2451
BmrFI	CCNGG	2 cut(s)	891, 2283
BmsI	GCATC	8 cut(s)	1038, 1122, 1135, 1215, 1292, 1580, 1849, 2428
BpiI	GAAGAC	1 cut(s)	1657
BpmI	CTGGAG	1 cut(s)	1556
Bpu10I	CCTNAGC	3 cut(s)	134, 1567, 2211
Bpu1102I	GCTNAGC	1 cut(s)	783
BsaAI	YACGTR	1 cut(s)	2065
BsaBI	GATNNNNATC	1 cut(s)	1449
BsaHI	GRCGYC	2 cut(s)	1109, 1662
BsaJI	CCNNGG	2 cut(s)	890, 1627
Bsc4I	CCNNNNNNNGG	2 cut(s)	213, 829
Bse1I	ACTGG	2 cut(s)	1595, 2311
Bse8I	GATNNNNATC	1 cut(s)	1449
BseBI	CCWGG	2 cut(s)	891, 2283
BseDI	CCNNGG	2 cut(s)	890, 1627
BseGI	GGATG	5 cut(s)	80, 612, 624, 1150, 1201
BseJI	GATNNNNATC	1 cut(s)	1449
BseLI	CCNNNNNNNGG	2 cut(s)	213, 829
BseMII	CTCAG	5 cut(s)	564, 774, 1196, 2202, 2363
BseNI	ACTGG	2 cut(s)	1595, 2311
BseRI	GAGGAG	4 cut(s)	54, 57, 283, 600
BseSI	GKGCMC	1 cut(s)	1711
BseXI	GCAGC	2 cut(s)	1267, 2149
BseYI	CCCAGC	1 cut(s)	299
BsgI	GTGCAG	3 cut(s)	449, 1956, 2374
Bsh1236I	CGCG	1 cut(s)	522
Bsh1285I	CGRYCG	1 cut(s)	823
BshFI	GGCC	3 cut(s)	156, 1791, 2416
BshNI	GGYRCC	1 cut(s)	402
BsiEI	CGRYCG	1 cut(s)	823
BsiHKAI	GWGCWC	1 cut(s)	1711
BsiHKCI	CYCGRG	1 cut(s)	1087
BsiSI	CCGG	1 cut(s)	1136
BslFI	GGGAC	1 cut(s)	2348
BslI	CCNNNNNNNGG	2 cut(s)	213, 829
BsmAI	GTCTC	4 cut(s)	146, 675, 1100, 1653
BsmBI	CGTCTC	2 cut(s)	1100, 1653
BsmFI	GGGAC	1 cut(s)	2348
BsnI	GGCC	3 cut(s)	156, 1791, 2416
BsoBI	CYCGRG	1 cut(s)	1087
Bsp1286I	GDGCHC	1 cut(s)	1711
Bsp143I	GATC	7 cut(s)	475, 926, 931, 1167, 1450, 1841, 2081
Bsp1720I	GCTNAGC	1 cut(s)	783
Bsp19I	CCATGG	1 cut(s)	1627
BspANI	GGCC	3 cut(s)	156, 1791, 2416
BspCNI	CTCAG	5 cut(s)	565, 775, 1195, 2203, 2362
BspFNI	CGCG	1 cut(s)	522
BspLI	GGNNCC	4 cut(s)	404, 2280, 2336, 2451
BspPI	GGATC	1 cut(s)	2089
BspQI	GCTCTTC	1 cut(s)	21
BspT107I	GGYRCC	1 cut(s)	402
BsrBI	CCGCTC	1 cut(s)	590
BsrI	ACTGG	2 cut(s)	1595, 2311
BssECI	CCNNGG	2 cut(s)	890, 1627
BssMI	GATC	7 cut(s)	475, 926, 931, 1167, 1450, 1841, 2081
BssNI	GRCGYC	2 cut(s)	1109, 1662
BssT1I	CCWWGG	1 cut(s)	1627
Bst2UI	CCWGG	2 cut(s)	891, 2283
Bst4CI	ACNGT	8 cut(s)	180, 824, 987, 996, 1014, 1261, 2170, 2321
Bst6I	CTCTTC	4 cut(s)	21, 334, 460, 2049
BstACI	GRCGYC	2 cut(s)	1109, 1662
BstAPI	GCANNNNNTGC	1 cut(s)	144
BstBAI	YACGTR	1 cut(s)	2065
BstC8I	GCNNGC	6 cut(s)	172, 346, 1020, 1588, 1891, 2098
BstDSI	CCRYGG	1 cut(s)	1627
BstEII	GGTNACC	1 cut(s)	1864
BstF5I	GGATG	5 cut(s)	80, 612, 624, 1150, 1201
BstFNI	CGCG	1 cut(s)	522
BstHHI	GCGC	2 cut(s)	350, 522
BstKTI	GATC	7 cut(s)	478, 929, 934, 1170, 1453, 1844, 2084
BstMAI	GTCTC	4 cut(s)	146, 675, 1100, 1653
BstMBI	GATC	7 cut(s)	475, 926, 931, 1167, 1450, 1841, 2081
BstMCI	CGRYCG	1 cut(s)	823
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 144, 153, 240, 436, 468, 635, 671
BstNI	CCWGG	2 cut(s)	891, 2283
BstNSI	RCATGY	8 cut(s)	253, 981, 1022, 1325, 1384, 1693, 1999, 2100
BstPI	GGTNACC	1 cut(s)	1864
BstSCI	CCNGG	2 cut(s)	889, 2281
BstSFI	CTRYAG	1 cut(s)	2287
BstSLI	GKGCMC	1 cut(s)	1711
BstUI	CGCG	1 cut(s)	522
BstV1I	GCAGC	2 cut(s)	1267, 2149
BstV2I	GAAGAC	1 cut(s)	1657
BstX2I	RGATCY	1 cut(s)	1841
BstYI	RGATCY	1 cut(s)	1841
BsuRI	GGCC	3 cut(s)	156, 1791, 2416
BtgI	CCRYGG	1 cut(s)	1627
BtsCI	GGATG	5 cut(s)	80, 612, 624, 1150, 1201
BtsI	GCAGTG	2 cut(s)	95, 2362
BtsIMutI	CAGTG	5 cut(s)	95, 255, 1602, 2357, 2362
Cac8I	GCNNGC	6 cut(s)	172, 346, 1020, 1588, 1891, 2098
CaiI	CAGNNNCTG	1 cut(s)	144
CfoI	GCGC	2 cut(s)	350, 522
Cfr13I	GGNCC	1 cut(s)	2335
Csp6I	GTAC	7 cut(s)	451, 497, 1084, 1483, 1693, 1853, 1951
CviQI	GTAC	7 cut(s)	451, 497, 1084, 1483, 1693, 1853, 1951
DpnI	GATC	7 cut(s)	477, 928, 933, 1169, 1452, 1843, 2083
DpnII	GATC	7 cut(s)	475, 926, 931, 1167, 1450, 1841, 2081
DrdI	GACNNNNNNGTC	1 cut(s)	1661
DseDI	GACNNNNNNGTC	1 cut(s)	1661
EaeI	YGGCCR	1 cut(s)	1789
Eam1104I	CTCTTC	4 cut(s)	21, 334, 460, 2049
EarI	CTCTTC	4 cut(s)	21, 334, 460, 2049
EciI	GGCGGA	2 cut(s)	661, 2393
Eco130I	CCWWGG	1 cut(s)	1627
Eco147I	AGGCCT	1 cut(s)	2416
Eco47I	GGWCC	1 cut(s)	2335
Eco57I	CTGAAG	1 cut(s)	279
Eco88I	CYCGRG	1 cut(s)	1087
Eco91I	GGTNACC	1 cut(s)	1864
EcoO65I	GGTNACC	1 cut(s)	1864
EcoRI	GAATTC	4 cut(s)	433, 1465, 1753, 2103
EcoRII	CCWGG	2 cut(s)	889, 2281
EcoT14I	CCWWGG	1 cut(s)	1627
ErhI	CCWWGG	1 cut(s)	1627
Esp3I	CGTCTC	2 cut(s)	1100, 1653
FalI	AAGNNNNNCTT	2 cut(s)	476, 508
FaqI	GGGAC	1 cut(s)	2348
FauI	CCCGC	3 cut(s)	137, 179, 365
FbaI	TGATCA	1 cut(s)	475
Fnu4HI	GCNGC	2 cut(s)	1281, 2163
FokI	GGATG	5 cut(s)	67, 619, 631, 1157, 1208
Fsp4HI	GCNGC	2 cut(s)	1281, 2163
FspBI	CTAG	4 cut(s)	807, 1004, 2331, 2435
GlaI	GCGC	2 cut(s)	349, 521
GluI	GCNGC	2 cut(s)	1281, 2163
GsaI	CCCAGC	1 cut(s)	303
GsuI	CTGGAG	1 cut(s)	1556
HaeIII	GGCC	3 cut(s)	156, 1791, 2416
HapII	CCGG	1 cut(s)	1136
HhaI	GCGC	2 cut(s)	350, 522
Hin1I	GRCGYC	2 cut(s)	1109, 1662
Hin6I	GCGC	2 cut(s)	348, 520
HinP1I	GCGC	2 cut(s)	348, 520
HincII	GTYRAC	1 cut(s)	2385
HindII	GTYRAC	1 cut(s)	2385
HindIII	AAGCTT	2 cut(s)	469, 1509
HinfI	GANTC	2 cut(s)	1250, 1934
HpaII	CCGG	1 cut(s)	1136
HphI	GGTGA	3 cut(s)	743, 1090, 2063
Hpy166II	GTNNAC	4 cut(s)	983, 1485, 1709, 2385
Hpy188I	TCNGA	6 cut(s)	411, 879, 931, 1043, 1185, 1809
Hpy188III	TCNNGA	8 cut(s)	84, 107, 214, 944, 1405, 2173, 2314, 2435
Hpy8I	GTNNAC	4 cut(s)	983, 1485, 1709, 2385
HpyAV	CCTTC	9 cut(s)	100, 146, 218, 416, 1910, 2210, 2251, 2269, 2427
HpyCH4III	ACNGT	8 cut(s)	180, 824, 987, 996, 1014, 1261, 2170, 2321
HpyCH4IV	ACGT	4 cut(s)	548, 1109, 1662, 2064
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 144, 153, 240, 436, 468, 635, 671
HpySE526I	ACGT	4 cut(s)	548, 1109, 1662, 2064
Hsp92I	GRCGYC	2 cut(s)	1109, 1662
HspAI	GCGC	2 cut(s)	348, 520
Ksp22I	TGATCA	1 cut(s)	475
Kzo9I	GATC	7 cut(s)	475, 926, 931, 1167, 1450, 1841, 2081
LguI	GCTCTTC	1 cut(s)	21
LmnI	GCTCC	4 cut(s)	131, 587, 1537, 2278
Lsp1109I	GCAGC	2 cut(s)	1267, 2149
LweI	GCATC	8 cut(s)	1038, 1122, 1135, 1215, 1292, 1580, 1849, 2428
MaeI	CTAG	4 cut(s)	807, 1004, 2331, 2435
MaeII	ACGT	4 cut(s)	548, 1109, 1662, 2064
MalI	GATC	7 cut(s)	477, 928, 933, 1169, 1452, 1843, 2083
MbiI	CCGCTC	1 cut(s)	590
MboI	GATC	7 cut(s)	475, 926, 931, 1167, 1450, 1841, 2081
MflI	RGATCY	1 cut(s)	1841
MhlI	GDGCHC	1 cut(s)	1711
MlsI	TGGCCA	1 cut(s)	1791
MluNI	TGGCCA	1 cut(s)	1791
MmeI	TCCRAC	4 cut(s)	978, 1288, 1990, 2273
Mox20I	TGGCCA	1 cut(s)	1791
MroXI	GAANNNNTTC	2 cut(s)	815, 2321
MscI	TGGCCA	1 cut(s)	1791
MseI	TTAA	6 cut(s)	567, 594, 971, 1116, 1208, 1967
MslI	CAYNNNNRTG	4 cut(s)	1379, 1610, 1772, 2436
Msp20I	TGGCCA	1 cut(s)	1791
MspI	CCGG	1 cut(s)	1136
MspR9I	CCNGG	2 cut(s)	891, 2283
MvaI	CCWGG	2 cut(s)	891, 2283
MvnI	CGCG	1 cut(s)	522
MwoI	GCNNNNNNNGC	8 cut(s)	11, 144, 153, 240, 436, 468, 635, 671
NcoI	CCATGG	1 cut(s)	1627
NdeII	GATC	7 cut(s)	475, 926, 931, 1167, 1450, 1841, 2081
NlaIV	GGNNCC	4 cut(s)	404, 2280, 2336, 2451
NmeAIII	GCCGAG	1 cut(s)	743
NmuCI	GTSAC	6 cut(s)	311, 389, 952, 1561, 1643, 1759
NspI	RCATGY	8 cut(s)	253, 981, 1022, 1325, 1384, 1693, 1999, 2100
PaeI	GCATGC	2 cut(s)	1022, 2100
PaeR7I	CTCGAG	1 cut(s)	1087
PceI	AGGCCT	1 cut(s)	2416
PciI	ACATGT	3 cut(s)	1380, 1689, 1995
PciSI	GCTCTTC	1 cut(s)	21
PcsI	WCGNNNNNNNCGW	1 cut(s)	554
PdmI	GAANNNNTTC	2 cut(s)	815, 2321
PfeI	GAWTC	2 cut(s)	1250, 1934
PkrI	GCNGC	2 cut(s)	1282, 2164
Ppu21I	YACGTR	1 cut(s)	2065
PscI	ACATGT	3 cut(s)	1380, 1689, 1995
Psp6I	CCWGG	2 cut(s)	889, 2281
PspEI	GGTNACC	1 cut(s)	1864
PspFI	CCCAGC	1 cut(s)	299
PspGI	CCWGG	2 cut(s)	889, 2281
PspN4I	GGNNCC	4 cut(s)	404, 2280, 2336, 2451
PspPI	GGNCC	1 cut(s)	2335
PspXI	VCTCGAGB	1 cut(s)	1087
PstNI	CAGNNNCTG	1 cut(s)	144
PsuI	RGATCY	1 cut(s)	1841
RsaI	GTAC	7 cut(s)	452, 498, 1085, 1484, 1694, 1854, 1952
RsaNI	GTAC	7 cut(s)	451, 497, 1084, 1483, 1693, 1853, 1951
RseI	CAYNNNNRTG	4 cut(s)	1379, 1610, 1772, 2436
SapI	GCTCTTC	1 cut(s)	21
SaqAI	TTAA	6 cut(s)	567, 594, 971, 1116, 1208, 1967
SatI	GCNGC	2 cut(s)	1281, 2163
Sau3AI	GATC	7 cut(s)	475, 926, 931, 1167, 1450, 1841, 2081
Sau96I	GGNCC	1 cut(s)	2335
ScrFI	CCNGG	2 cut(s)	891, 2283
SduI	GDGCHC	1 cut(s)	1711
SfaNI	GCATC	8 cut(s)	1038, 1122, 1135, 1215, 1292, 1580, 1849, 2428
SfcI	CTRYAG	1 cut(s)	2287
Sfr274I	CTCGAG	1 cut(s)	1087
SinI	GGWCC	1 cut(s)	2335
SlaI	CTCGAG	1 cut(s)	1087
SmiMI	CAYNNNNRTG	4 cut(s)	1379, 1610, 1772, 2436
SmlI	CTYRAG	1 cut(s)	1087
SmoI	CTYRAG	1 cut(s)	1087
SphI	GCATGC	2 cut(s)	1022, 2100
SseBI	AGGCCT	1 cut(s)	2416
SspMI	CTAG	4 cut(s)	807, 1004, 2331, 2435
StuI	AGGCCT	1 cut(s)	2416
StyD4I	CCNGG	2 cut(s)	889, 2281
StyI	CCWWGG	1 cut(s)	1627
TaaI	ACNGT	8 cut(s)	180, 824, 987, 996, 1014, 1261, 2170, 2321
TaiI	ACGT	4 cut(s)	551, 1112, 1665, 2067
TaqI	TCGA	5 cut(s)	108, 183, 583, 819, 1088
TaqII	GACCGA	1 cut(s)	1671
TatI	WGTACW	4 cut(s)	450, 1083, 1692, 1950
TfiI	GAWTC	2 cut(s)	1250, 1934
Tru1I	TTAA	6 cut(s)	567, 594, 971, 1116, 1208, 1967
Tru9I	TTAA	6 cut(s)	567, 594, 971, 1116, 1208, 1967
TscAI	CASTG	5 cut(s)	102, 262, 1602, 2357, 2362
TseFI	GTSAC	6 cut(s)	311, 389, 952, 1561, 1643, 1759
TseI	GCWGC	2 cut(s)	1280, 2162
Tsp45I	GTSAC	6 cut(s)	311, 389, 952, 1561, 1643, 1759
TspRI	CASTG	5 cut(s)	102, 262, 1602, 2357, 2362
VneI	GTGCAC	1 cut(s)	1707
VpaK11BI	GGWCC	1 cut(s)	2335
XapI	RAATTY	6 cut(s)	433, 1349, 1465, 1753, 2073, 2103
XbaI	TCTAGA	1 cut(s)	2434
XceI	RCATGY	8 cut(s)	253, 981, 1022, 1325, 1384, 1693, 1999, 2100
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1777
XhoI	CTCGAG	1 cut(s)	1087
XmnI	GAANNNNTTC	2 cut(s)	815, 2321
XspI	CTAG	4 cut(s)	807, 1004, 2331, 2435
ZraI	GACGTC	2 cut(s)	1110, 1663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.