Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0010197

Physical Location & Seq

Genomic Coordinates Forward (+)

74943444 .. 74948238

Gene Structure 4795 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG524100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGCCCACTGAAGCCCTCTTGTTCTATTCCCACATGAAAAACTCCTCCCCCAGCACCAAATGTGACCCTTACACTTACTCTTCCACCCTCAAAGCCTGCGCCGATACCCGCAATTTCAACATTGGCAAGGCTGTGCATTGTCACATTCTTCGGTGCCTTCCGAACCCAAGTATGATTGTGCAGAATTCGCTAATGAATATGTACTCTTCCTGCATTGGAAGCTTTGATCATGCCAAGTATGACTTAGTACGCAAGGTGTTTGACACAATGCGTGAGAGAAATGTGGTTGCGTGGAACACGTTGGTTTCGTGGTATGTTAAGACTGAGAGGTATCGAGGAGCGGTTAAGCAGTTTAGGATGATGATGAGGATGAGAATAACCCCAAGTGCTGTGAGTTTTGTCAATGTTTTCCCTGCTTTATCCGCCGTGACAGACTATAAAAATGCCAATGTTTTATATGGTTTGGTTGTTAGATTTGGCGGTGAGTATGTGAATGACTTGTTTGTTGTGAGCTCGGCGATATTTATGTATGCTGAGCTTGGTTGCCTTGATTATGCTAGGAAGATTTTCGACCGTTGTTTGGGGAGAAACACAGAGATATGGAACACCATGATTGGTGGGTATGTTCAGAATAATCTTCCTGGGGAAGCAATCAGCCTTTTCTTTCAAGCCATACGATCAGATCAGGCTGTTCTTGATGAAGTGACTTTTCTTTCGGTTTTAACTGCATTTTCACAGTTGCAACAGTTGGAACTAGCTGGACAGTTGCATGCTTTTATTACTAAGCATTTCAGAGTGATGCCTGTTATTTTACTAAATGCAATTATGGTGATGTACTCGAGGTGCAATTCTATTGAGACGTCATTTAAGTTTTTTCATAAGATGCCGGAGAGGGATGCTGTTTCATGGAATACCATGATCTCTGTGTTTTCTCAGAGTGGCTTGGATGATGAGGCTTTAATGCTTGTTTATGAGATGCAAAAACAAAACTTTTTGATTGATTCTGTAACTGTAACTGCTCTACTTTCGGCTGCATCAAATCTTAGAAATATAGATGTTGGACAGCAGACACATGCTTATATTATTAGGCATGGAATAGAATTTGAGGGAATGGAAAGTTATCTCATAGACATGTATGCCAAATCTGGTTCAGTCAGGATTGCAGAACGACTTTTCAAAAAGAACTATATTGTTGATAGAGATCATGCTACTTGGAATTCTATGGTTACTGGGTACACACAGAACGGCATGATTGAAGAAGCTTTTGTAGTTTTTAGGAAAATGCTGGAGCAGAAGCTAATACCAAATGCTGTGACCTTAGCATCAATTTTCCCTGCTTGCAATCCAGTGGGGAACATAGATATGGGTAAGCAACTCCATGGGTTCTCTTTTCGTCACTACCTTGACCGAGACGTCTTCGTGGGAACTGCTCTAATTGACATGTACTCAAAATGTGGTGCACTAACTTATGCTGAAAATGTGTTTTTTGAAACCCATGAAAAGAATTCTGTCACATACACCACAATGATATTGGGCTATGGCCAACATGGAATGGGTCAGAAAGCTGTGTCTTTGTTTCACTCAATGAAGAGATCTGGCATTGTACCTGATGCAGTTACCTTTGTTGCTGTCTTGGCTGCTTGCAGTTATGCTGGTTTGGTTGATGAAGGTCTTTCTTTATATGATTCAATGAAAATGGAGTACAACATAAAATCATTAACTGCACATTATTGTTGTATAGCGGACATGTTAGGGAGGGTTGGAAAAGTAGTTGAAGCATACGAGTTTGTTATAGGGTTGGGTGAAGAGGGTTACGTGATAGAAATTTGGGGATCACTTCTTGGTGCATGCAGAATTCATAAACAATTTGAATTGGGCAAGATTGTTGCTGATAAATTGCTTGAAATAAAGGCTGCTAATGTCAAGACAGGCTACCATGTTTTGCTCTCAAATATGTATGCTGAGGAAGGAAAGTGGGAAATTGTTGATAAAATGAGAAAACAAATGAAAGAGAAAGGTTTGAAGAAGGAGCCTGGCTGTAGTTGGATTGAGATTACTGGTTTCCTGAACTGTTTCATTTCTAGGGACCAAAAGCACCCTCAGTGCAGTGAGATATATGGTATGTTGGCGGAGTTGACTATGATGATGAAAGAAGCTGGTTATAGGCCTTCTCTCAATTCCCATCTAGATGCAATTTTGGAACCTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

736

Amino Acids

83.31

Weight (kDa)

7.27

Isoelectric Point (pI)

39.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	93 - 138	2.8e-07	PPR repeat family
PPR_2	PF13041	299 - 344	2.7e-08	PPR repeat family
PPR	PF01535	301 - 330	1.7e-06	PPR repeat
PPR_1	PF12854	400 - 428	9.2e-06	PPR repeat
PPR_2	PF13041	401 - 447	2.9e-09	PPR repeat family
PPR	PF01535	404 - 431	6e-08	PPR repeat
PPR_2	PF13041	501 - 548	5.1e-13	PPR repeat family
PPR	PF01535	504 - 534	4.6e-09	PPR repeat
E_motif	PF20431	620 - 684	3.8e-19	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010197)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22150 AT3G22150
fragaria_vesca	FvH4_5g30430 FvH4_5g30430
malus_domestica	MD09G1140900.v1.1 MD09G1141400.v1.1 MD09G1141900.v1.1
prunus_persica	Prupe.3G184500_v2.0.a1
pyrus_communis	pycom09g06220 pycom17g12210
rosa_chinensis	RchiOBHm_Chr2g0153281
rosa_laevigata	RLG00000020690
rosa_multiflora	Rmu_sc0000442.1_g000012 Rmu_sc0004856.1_g000015
rosa_roxburghii	Rroxscaffold_2G00095060
rosa_rugosa	Rorug02G0437900
rosa_samantha	Rh2AG500900 Rh2BG512400 Rh2CG487100 Rh2DG524100
rosa_wichuraiana	Rw2G041110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1412
AatII	GACGTC	2 cut(s)	863, 1416
AccB1I	GGYRCC	1 cut(s)	153
AccBSI	CCGCTC	1 cut(s)	341
AciI	CCGC	6 cut(s)	109, 341, 423, 480, 1742, 2129
AclWI	GGATC	1 cut(s)	1840
AcoI	YGGCCR	1 cut(s)	1540
AcsI	RAATTY	6 cut(s)	184, 1100, 1216, 1504, 1824, 1854
AcuI	CTGAAG	1 cut(s)	30
AcyI	GRCGYC	2 cut(s)	860, 1413
AfaI	GTAC	7 cut(s)	203, 249, 836, 1235, 1445, 1605, 1703
AfiI	CCNNNNNNNGG	1 cut(s)	580
AflIII	ACRYGT	4 cut(s)	297, 1131, 1440, 1746
AjnI	CCWGG	2 cut(s)	640, 2032
AluBI	AGCT	8 cut(s)	222, 513, 538, 758, 1262, 1297, 1565, 2156
AluI	AGCT	8 cut(s)	222, 513, 538, 758, 1262, 1297, 1565, 2156
Alw21I	GWGCWC	2 cut(s)	515, 1462
Alw26I	GTCTC	2 cut(s)	851, 1404
Alw44I	GTGCAC	1 cut(s)	1458
AlwI	GGATC	1 cut(s)	1840
Ama87I	CYCGRG	1 cut(s)	838
AoxI	GGCC	2 cut(s)	1540, 2165
ApaLI	GTGCAC	1 cut(s)	1458
ApeKI	GCWGC	3 cut(s)	1031, 1637, 1913
ApoI	RAATTY	6 cut(s)	184, 1100, 1216, 1504, 1824, 1854
ArsI	GACNNNNNNTTYG	2 cut(s)	697, 729
Asp700I	GAANNNNTTC	2 cut(s)	566, 2072
AspLEI	GCGC	1 cut(s)	101
AspS9I	GGNCC	1 cut(s)	2086
AsuHPI	GGTGA	3 cut(s)	494, 841, 1814
AvaI	CYCGRG	1 cut(s)	838
AvaII	GGWCC	1 cut(s)	2086
BaeGI	GKGCMC	1 cut(s)	1462
BalI	TGGCCA	1 cut(s)	1542
BanI	GGYRCC	1 cut(s)	153
BanII	GRGCYC	1 cut(s)	515
BbsI	GAAGAC	1 cut(s)	1408
Bbv12I	GWGCWC	2 cut(s)	515, 1462
BbvCI	CCTCAGC	1 cut(s)	1962
BbvI	GCAGC	3 cut(s)	1018, 1624, 1900
BccI	CCATC	1 cut(s)	2190
BceAI	ACGGC	2 cut(s)	410, 1261
BciT130I	CCWGG	2 cut(s)	642, 2034
BclI	TGATCA	1 cut(s)	226
BcoDI	GTCTC	2 cut(s)	851, 1404
BfaI	CTAG	4 cut(s)	558, 755, 2082, 2186
BfmI	CTRYAG	1 cut(s)	2038
BglII	AGATCT	1 cut(s)	1592
BisI	GCNGC	3 cut(s)	1032, 1638, 1914
BlpI	GCTNAGC	1 cut(s)	534
BlsI	GCNGC	3 cut(s)	1033, 1639, 1915
Bme1390I	CCNGG	2 cut(s)	642, 2034
Bme18I	GGWCC	1 cut(s)	2086
BmeT110I	CYCGRG	1 cut(s)	838
BmgT120I	GGNCC	1 cut(s)	2086
BmiI	GGNNCC	4 cut(s)	155, 2031, 2087, 2202
BmrFI	CCNGG	2 cut(s)	642, 2034
BmrI	ACTGGG	1 cut(s)	1239
BmsI	GCATC	8 cut(s)	789, 873, 886, 966, 1043, 1331, 1600, 2179
BmuI	ACTGGG	1 cut(s)	1239
BpiI	GAAGAC	1 cut(s)	1408
BpmI	CTGGAG	1 cut(s)	1307
Bpu10I	CCTNAGC	2 cut(s)	1318, 1962
Bpu1102I	GCTNAGC	1 cut(s)	534
BsaAI	YACGTR	1 cut(s)	1816
BsaBI	GATNNNNATC	1 cut(s)	1200
BsaHI	GRCGYC	2 cut(s)	860, 1413
BsaJI	CCNNGG	2 cut(s)	641, 1378
Bsc4I	CCNNNNNNNGG	1 cut(s)	580
Bse1I	ACTGG	3 cut(s)	1234, 1346, 2062
Bse8I	GATNNNNATC	1 cut(s)	1200
BseBI	CCWGG	2 cut(s)	642, 2034
BseDI	CCNNGG	2 cut(s)	641, 1378
BseGI	GGATG	4 cut(s)	363, 375, 901, 952
BseJI	GATNNNNATC	1 cut(s)	1200
BseLI	CCNNNNNNNGG	1 cut(s)	580
BseMII	CTCAG	5 cut(s)	315, 525, 947, 1953, 2114
BseNI	ACTGG	3 cut(s)	1234, 1346, 2062
BseRI	GAGGAG	2 cut(s)	34, 351
BseSI	GKGCMC	1 cut(s)	1462
BseXI	GCAGC	3 cut(s)	1018, 1624, 1900
BseYI	CCCAGC	1 cut(s)	50
BsgI	GTGCAG	3 cut(s)	200, 1707, 2125
Bsh1285I	CGRYCG	1 cut(s)	574
BshFI	GGCC	2 cut(s)	1542, 2167
BshNI	GGYRCC	1 cut(s)	153
BsiEI	CGRYCG	1 cut(s)	574
BsiHKAI	GWGCWC	2 cut(s)	515, 1462
BsiHKCI	CYCGRG	1 cut(s)	838
BsiSI	CCGG	1 cut(s)	887
BslFI	GGGAC	1 cut(s)	2099
BslI	CCNNNNNNNGG	1 cut(s)	580
BsmAI	GTCTC	2 cut(s)	851, 1404
BsmBI	CGTCTC	2 cut(s)	851, 1404
BsmFI	GGGAC	1 cut(s)	2099
BsnI	GGCC	2 cut(s)	1542, 2167
BsoBI	CYCGRG	1 cut(s)	838
Bsp1286I	GDGCHC	2 cut(s)	515, 1462
Bsp143I	GATC	7 cut(s)	226, 677, 682, 918, 1201, 1592, 1832
Bsp1720I	GCTNAGC	1 cut(s)	534
Bsp19I	CCATGG	1 cut(s)	1378
BspACI	CCGC	6 cut(s)	109, 341, 423, 480, 1742, 2129
BspANI	GGCC	2 cut(s)	1542, 2167
BspCNI	CTCAG	5 cut(s)	316, 526, 946, 1954, 2113
BspLI	GGNNCC	4 cut(s)	155, 2031, 2087, 2202
BspPI	GGATC	1 cut(s)	1840
BspT107I	GGYRCC	1 cut(s)	153
BsrBI	CCGCTC	1 cut(s)	341
BsrI	ACTGG	3 cut(s)	1234, 1346, 2062
BssECI	CCNNGG	2 cut(s)	641, 1378
BssMI	GATC	7 cut(s)	226, 677, 682, 918, 1201, 1592, 1832
BssNI	GRCGYC	2 cut(s)	860, 1413
BssT1I	CCWWGG	1 cut(s)	1378
Bst2UI	CCWGG	2 cut(s)	642, 2034
Bst4CI	ACNGT	6 cut(s)	575, 738, 747, 765, 1012, 2072
Bst6I	CTCTTC	4 cut(s)	85, 211, 1583, 1800
BstACI	GRCGYC	2 cut(s)	860, 1413
BstBAI	YACGTR	1 cut(s)	1816
BstC8I	GCNNGC	5 cut(s)	97, 771, 1339, 1642, 1849
BstDEI	CTNAG	9 cut(s)	244, 324, 534, 783, 933, 1043, 1318, 1962, 2100
BstDSI	CCRYGG	1 cut(s)	1378
BstF5I	GGATG	4 cut(s)	363, 375, 901, 952
BstHHI	GCGC	1 cut(s)	101
BstKTI	GATC	7 cut(s)	229, 680, 685, 921, 1204, 1595, 1835
BstMAI	GTCTC	2 cut(s)	851, 1404
BstMBI	GATC	7 cut(s)	226, 677, 682, 918, 1201, 1592, 1832
BstMCI	CGRYCG	1 cut(s)	574
BstMWI	GCNNNNNNNGC	4 cut(s)	187, 219, 422, 1634
BstNI	CCWGG	2 cut(s)	642, 2034
BstNSI	RCATGY	6 cut(s)	773, 1076, 1135, 1444, 1750, 1851
BstSCI	CCNGG	2 cut(s)	640, 2032
BstSFI	CTRYAG	1 cut(s)	2038
BstSLI	GKGCMC	1 cut(s)	1462
BstV1I	GCAGC	3 cut(s)	1018, 1624, 1900
BstV2I	GAAGAC	1 cut(s)	1408
BstX2I	RGATCY	1 cut(s)	1592
BstYI	RGATCY	1 cut(s)	1592
BsuRI	GGCC	2 cut(s)	1542, 2167
BtgI	CCRYGG	1 cut(s)	1378
BtsCI	GGATG	4 cut(s)	363, 375, 901, 952
BtsI	GCAGTG	1 cut(s)	2113
BtsIMutI	CAGTG	4 cut(s)	6, 1353, 2108, 2113
Cac8I	GCNNGC	5 cut(s)	97, 771, 1339, 1642, 1849
CfoI	GCGC	1 cut(s)	101
Cfr13I	GGNCC	1 cut(s)	2086
Csp6I	GTAC	7 cut(s)	202, 248, 835, 1234, 1444, 1604, 1702
CviQI	GTAC	7 cut(s)	202, 248, 835, 1234, 1444, 1604, 1702
DdeI	CTNAG	9 cut(s)	244, 324, 534, 783, 933, 1043, 1318, 1962, 2100
DpnI	GATC	7 cut(s)	228, 679, 684, 920, 1203, 1594, 1834
DpnII	GATC	7 cut(s)	226, 677, 682, 918, 1201, 1592, 1832
DrdI	GACNNNNNNGTC	1 cut(s)	1412
DseDI	GACNNNNNNGTC	1 cut(s)	1412
EaeI	YGGCCR	1 cut(s)	1540
Eam1104I	CTCTTC	4 cut(s)	85, 211, 1583, 1800
EarI	CTCTTC	4 cut(s)	85, 211, 1583, 1800
EciI	GGCGGA	2 cut(s)	412, 2144
Ecl136II	GAGCTC	1 cut(s)	513
Eco130I	CCWWGG	1 cut(s)	1378
Eco147I	AGGCCT	1 cut(s)	2167
Eco24I	GRGCYC	1 cut(s)	515
Eco47I	GGWCC	1 cut(s)	2086
Eco53kI	GAGCTC	1 cut(s)	513
Eco57I	CTGAAG	1 cut(s)	30
Eco88I	CYCGRG	1 cut(s)	838
EcoICRI	GAGCTC	1 cut(s)	513
EcoRI	GAATTC	4 cut(s)	184, 1216, 1504, 1854
EcoRII	CCWGG	2 cut(s)	640, 2032
EcoT14I	CCWWGG	1 cut(s)	1378
EcoT38I	GRGCYC	1 cut(s)	515
ErhI	CCWWGG	1 cut(s)	1378
Esp3I	CGTCTC	2 cut(s)	851, 1404
FalI	AAGNNNNNCTT	2 cut(s)	227, 259
FaqI	GGGAC	1 cut(s)	2099
FauI	CCCGC	1 cut(s)	116
FbaI	TGATCA	1 cut(s)	226
Fnu4HI	GCNGC	3 cut(s)	1032, 1638, 1914
FokI	GGATG	4 cut(s)	370, 382, 908, 959
FriOI	GRGCYC	1 cut(s)	515
Fsp4HI	GCNGC	3 cut(s)	1032, 1638, 1914
FspBI	CTAG	4 cut(s)	558, 755, 2082, 2186
GlaI	GCGC	1 cut(s)	100
GluI	GCNGC	3 cut(s)	1032, 1638, 1914
GsaI	CCCAGC	1 cut(s)	54
GsuI	CTGGAG	1 cut(s)	1307
HaeIII	GGCC	2 cut(s)	1542, 2167
HapII	CCGG	1 cut(s)	887
HhaI	GCGC	1 cut(s)	101
Hin1I	GRCGYC	2 cut(s)	860, 1413
Hin6I	GCGC	1 cut(s)	99
HinP1I	GCGC	1 cut(s)	99
HincII	GTYRAC	1 cut(s)	2136
HindII	GTYRAC	1 cut(s)	2136
HindIII	AAGCTT	2 cut(s)	220, 1260
HinfI	GANTC	2 cut(s)	1001, 1685
HpaII	CCGG	1 cut(s)	887
HphI	GGTGA	3 cut(s)	494, 841, 1814
Hpy166II	GTNNAC	3 cut(s)	1236, 1460, 2136
Hpy188I	TCNGA	6 cut(s)	162, 630, 682, 794, 936, 1560
Hpy188III	TCNNGA	5 cut(s)	695, 1156, 1924, 2065, 2186
Hpy8I	GTNNAC	3 cut(s)	1236, 1460, 2136
HpyAV	CCTTC	5 cut(s)	167, 1661, 1961, 2020, 2178
HpyCH4III	ACNGT	6 cut(s)	575, 738, 747, 765, 1012, 2072
HpyCH4IV	ACGT	4 cut(s)	299, 860, 1413, 1815
HpyF10VI	GCNNNNNNNGC	4 cut(s)	187, 219, 422, 1634
HpyF3I	CTNAG	9 cut(s)	244, 324, 534, 783, 933, 1043, 1318, 1962, 2100
HpySE526I	ACGT	4 cut(s)	299, 860, 1413, 1815
Hsp92I	GRCGYC	2 cut(s)	860, 1413
HspAI	GCGC	1 cut(s)	99
Ksp22I	TGATCA	1 cut(s)	226
Kzo9I	GATC	7 cut(s)	226, 677, 682, 918, 1201, 1592, 1832
LmnI	GCTCC	3 cut(s)	338, 1288, 2029
Lsp1109I	GCAGC	3 cut(s)	1018, 1624, 1900
LweI	GCATC	8 cut(s)	789, 873, 886, 966, 1043, 1331, 1600, 2179
MaeI	CTAG	4 cut(s)	558, 755, 2082, 2186
MaeII	ACGT	4 cut(s)	299, 860, 1413, 1815
MalI	GATC	7 cut(s)	228, 679, 684, 920, 1203, 1594, 1834
MbiI	CCGCTC	1 cut(s)	341
MboI	GATC	7 cut(s)	226, 677, 682, 918, 1201, 1592, 1832
MflI	RGATCY	1 cut(s)	1592
MhlI	GDGCHC	2 cut(s)	515, 1462
MlsI	TGGCCA	1 cut(s)	1542
MluNI	TGGCCA	1 cut(s)	1542
MmeI	TCCRAC	4 cut(s)	729, 1039, 1741, 2024
Mox20I	TGGCCA	1 cut(s)	1542
MroXI	GAANNNNTTC	2 cut(s)	566, 2072
MscI	TGGCCA	1 cut(s)	1542
MseI	TTAA	6 cut(s)	318, 345, 722, 867, 959, 1718
MslI	CAYNNNNRTG	4 cut(s)	1130, 1361, 1523, 2187
Msp20I	TGGCCA	1 cut(s)	1542
MspI	CCGG	1 cut(s)	887
MspR9I	CCNGG	2 cut(s)	642, 2034
MvaI	CCWGG	2 cut(s)	642, 2034
MwoI	GCNNNNNNNGC	4 cut(s)	187, 219, 422, 1634
NcoI	CCATGG	1 cut(s)	1378
NdeII	GATC	7 cut(s)	226, 677, 682, 918, 1201, 1592, 1832
NlaIV	GGNNCC	4 cut(s)	155, 2031, 2087, 2202
NmeAIII	GCCGAG	1 cut(s)	494
NmuCI	GTSAC	7 cut(s)	62, 140, 427, 703, 1312, 1394, 1510
NspI	RCATGY	6 cut(s)	773, 1076, 1135, 1444, 1750, 1851
PaeI	GCATGC	2 cut(s)	773, 1851
PaeR7I	CTCGAG	1 cut(s)	838
PceI	AGGCCT	1 cut(s)	2167
PciI	ACATGT	3 cut(s)	1131, 1440, 1746
PcsI	WCGNNNNNNNCGW	1 cut(s)	305
PdmI	GAANNNNTTC	2 cut(s)	566, 2072
PfeI	GAWTC	2 cut(s)	1001, 1685
PkrI	GCNGC	3 cut(s)	1033, 1639, 1915
Ppu21I	YACGTR	1 cut(s)	1816
PscI	ACATGT	3 cut(s)	1131, 1440, 1746
Psp124BI	GAGCTC	1 cut(s)	515
Psp6I	CCWGG	2 cut(s)	640, 2032
PspFI	CCCAGC	1 cut(s)	50
PspGI	CCWGG	2 cut(s)	640, 2032
PspN4I	GGNNCC	4 cut(s)	155, 2031, 2087, 2202
PspPI	GGNCC	1 cut(s)	2086
PspXI	VCTCGAGB	1 cut(s)	838
PsuI	RGATCY	1 cut(s)	1592
RsaI	GTAC	7 cut(s)	203, 249, 836, 1235, 1445, 1605, 1703
RsaNI	GTAC	7 cut(s)	202, 248, 835, 1234, 1444, 1604, 1702
RseI	CAYNNNNRTG	4 cut(s)	1130, 1361, 1523, 2187
SacI	GAGCTC	1 cut(s)	515
SaqAI	TTAA	6 cut(s)	318, 345, 722, 867, 959, 1718
SatI	GCNGC	3 cut(s)	1032, 1638, 1914
Sau3AI	GATC	7 cut(s)	226, 677, 682, 918, 1201, 1592, 1832
Sau96I	GGNCC	1 cut(s)	2086
ScrFI	CCNGG	2 cut(s)	642, 2034
SduI	GDGCHC	2 cut(s)	515, 1462
SfaNI	GCATC	8 cut(s)	789, 873, 886, 966, 1043, 1331, 1600, 2179
SfcI	CTRYAG	1 cut(s)	2038
Sfr274I	CTCGAG	1 cut(s)	838
SinI	GGWCC	1 cut(s)	2086
SlaI	CTCGAG	1 cut(s)	838
SmiMI	CAYNNNNRTG	4 cut(s)	1130, 1361, 1523, 2187
SmlI	CTYRAG	1 cut(s)	838
SmoI	CTYRAG	1 cut(s)	838
SphI	GCATGC	2 cut(s)	773, 1851
SseBI	AGGCCT	1 cut(s)	2167
SsiI	CCGC	6 cut(s)	109, 341, 423, 480, 1742, 2129
SspMI	CTAG	4 cut(s)	558, 755, 2082, 2186
SstI	GAGCTC	1 cut(s)	515
StuI	AGGCCT	1 cut(s)	2167
StyD4I	CCNGG	2 cut(s)	640, 2032
StyI	CCWWGG	1 cut(s)	1378
TaaI	ACNGT	6 cut(s)	575, 738, 747, 765, 1012, 2072
TaiI	ACGT	4 cut(s)	302, 863, 1416, 1818
TaqI	TCGA	3 cut(s)	334, 570, 839
TaqII	GACCGA	1 cut(s)	1422
TatI	WGTACW	4 cut(s)	201, 834, 1443, 1701
TfiI	GAWTC	2 cut(s)	1001, 1685
Tru1I	TTAA	6 cut(s)	318, 345, 722, 867, 959, 1718
Tru9I	TTAA	6 cut(s)	318, 345, 722, 867, 959, 1718
TscAI	CASTG	4 cut(s)	13, 1353, 2108, 2113
TseFI	GTSAC	7 cut(s)	62, 140, 427, 703, 1312, 1394, 1510
TseI	GCWGC	3 cut(s)	1031, 1637, 1913
Tsp45I	GTSAC	7 cut(s)	62, 140, 427, 703, 1312, 1394, 1510
TspRI	CASTG	4 cut(s)	13, 1353, 2108, 2113
VneI	GTGCAC	1 cut(s)	1458
VpaK11BI	GGWCC	1 cut(s)	2086
XapI	RAATTY	6 cut(s)	184, 1100, 1216, 1504, 1824, 1854
XbaI	TCTAGA	1 cut(s)	2185
XceI	RCATGY	6 cut(s)	773, 1076, 1135, 1444, 1750, 1851
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1528
XhoI	CTCGAG	1 cut(s)	838
XmnI	GAANNNNTTC	2 cut(s)	566, 2072
XspI	CTAG	4 cut(s)	558, 755, 2082, 2186
ZraI	GACGTC	2 cut(s)	861, 1414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.