Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0003362

Physical Location & Seq

Genomic Coordinates Reverse (-)

14568546 .. 14574475

Gene Structure 5930 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1172500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGGTTGTTTTGGTGCGAATTCCAGTTAGGTTCTGGCATAGCAGTCTAGCAGCAACTCCACAAAAGCAAGAAGCTGTTGAAATTTGTGTGTCTGGTGGGGGTTTAATTGTGGTTTCTTTTGGGGATCGAAACTCGAAGGCATTGCCATTGAGACGAATTGGAGGCAGAATGGGTGGAGAGGATAAGTCACACAAACGGAGTAGAAAGAAAATGGATATGGGCAGAAAGCATGATAAACAAAGTTCCTCCCTTGATGCCAATGTTGGGAGAAAGGGATCCTGGCGGGGTTCGAAACATCAAGGCGATTCGGAGACACAAAAACCATTGGTTAGGAAACAGGTTGATCCCGAAACCATGAATTACTTCAAGGAAATTGATAACCTTTTCGCGAGTAATGGGGATGATATGGAGGAGCGATCAGTTGTATGTGGTAATGCCCTTGAGGAAGCTAAGGGGAGAGAAATGGAACTGGCAACCCATTATATCATAAGCCATACTATGCAGAAACTCCTTGAGGGCTGTGATGTTGACAGCCTTTGTGGTTTCCTTCGAAACTGTGCAAAGGACTTCCCTTCTATTGCAATGGATCAATCTGGTTCTCATGTAGCTGAGTCTGCCATCAAGTCTTTATCTAGGCATCTTGAGGACAATGAGGCGTATTCTGCTATTGAAGACACTGTAAATGCAATATGCAAGGTGATTGCAAAGAATCCTGGTGATCTGATGTACGATCGCTATGGATCTCATGTTCTCCGAAGTTTTCTTTCTCTTCTTAAAGGAGTACCATTAGATTCTTCTGAGTTTCACGGGACCAAGTCTTCTTCAGTTGCAGAGCAATTGAACTTCAAGGCATCTCGAGCAGACACAGATATTACACCACATTCTGTACAGGGATTCCCACGTTTATTTGACTTTCTTGTTTCAGGGATGTTCAAGTGTATCCAAAACAACATTCAGACCCTGCAAGTTGATCAGTACAGCAGTTTGGTTCTGCAGACTGCTTTGCAGTTGTTAGCAGGAGATGAAGAAAAGCTGTTGCAATTGATTCCCATTCTTATTGGATGTACTAGGGAAGATATTTTAGAAGGAAAATCCATCCAAACGACTAAAGTGAGAGGCATTTTACATCTCATGAAAGAAACAGCATTTAGTCATTTAATTGAGGTTGTTTTGGGAGTGGCTCCCGAAGTCTTGTACAATGAAATGTTCACAAAAGTTTTTAGAAACGCATTATTTGAGCTTTCATCTCATCATTGTGGGAACTTTGTTATTCAAGCCTTAATTTCTCAAGCCCGGCATAAAGATCAAATGGAGTTGATTTGGGAGGAACTTGGTTCGAAATTTAAGGATCTGCTCAAAACAGGAAAATCAGGAGTTATTGCTTCGCTGATTGCTGCAAGTCAAAGGCTGCATACTTATGAGCATAAGTGTTGTGAGGCCCTTGCTACTGCGGTACATTCAAGCAATGAAGACTCTACATGCATTGTTCCCCGATTACTGTTTATTGACAGCTACTTCTACTGTGAAGATAAGTCCAACTGGAATTGGCCAGCCGGTGGTAGAATGCATGTCATGGGTTCTTTGATTCTCCAAAGAGTTTTTCAATTTCAAAATGAATTCATACATCCTTTTATTACAAGCATTACGTGCCTCAATGCTGATAACATACTTGAAATTGCTAAAGATTCCAAAGGTGCTCATGTTATTGAAGCTTTTCTAAGTTCTGATGCTTCTGCAAAACTGAAGCGCCGGTTAATCATGAAGCTTCGTGGACATTTTGGAGAGCTTTCATTGCAATCATCAGGCTCTTTTACTGTTGAAAAGTGTTTTAGTGTGGGTAACATCTCACTGAGAGAGGCCATAGTAACTGAGTTGGTAGCTGTGCAAAATGAGCTTTGGAACAAGAAGCATGGCCCTCATCTCATGCGGAAACTAGATGTTGATGGATTTGCTGCTAGACCTGATCAGTGGAGGTCCAGGCAAGAATCGAAACAATCAACTGTCAATGAATTTATTTCTACATTTGGCTCTAGTGAGACCAAGCCGTCAAAGAGCGGCAGCTTTCTTTCAGACGATTTTAAGAACACATCGCGACCAAATAAAGTAAAGCAAATGAGTGAAGAGATTGCACATCTCCAGGAATCTCCTGCACCATTTCTGAGTACATCAGGCATCAAACACAAACCAAAGAAAACAGAACGGAACAGCAAGAAGTTTGGAAAGTTTTCAGCAGCCGAGAATGTTTCTAAAGGAAAGAAAAACAAGTCGAAGAAAATAGTCACAGATGAGGGAGCATCCCAATCCACTGCCAAGAAAGAGAAGAAACGGCACAGAGAGGATGTTGAGTCAAAATCCTCTAAGAAGTCTAAAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0010033 GO:0010252 GO:0031974 GO:0031981 GO:0034284 GO:0034285 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048878 GO:0050896 GO:0065007 GO:0065008 GO:0070013 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUF

Protein Analysis

792

Amino Acids

88.27

Weight (kDa)

9.01

Isoelectric Point (pI)

45.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUF_NOP9	PF22493	152 - 638	4.2e-66	NOP9-like PUF repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72320 AT1G72320 AT1G72320 AT1G72320
fragaria_vesca	FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860
malus_domestica	MD09G1172500.v1.1
prunus_persica	Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1
pyrus_communis	pycom09g09000
rosa_chinensis	RchiOBHm_Chr2g0147901
rosa_laevigata	RLG00000020291
rosa_multiflora	Rmu_sc0000308.1_g000059
rosa_roxburghii	Rroxscaffold_2G00099210
rosa_rugosa	Rorug02G0402900
rosa_samantha	Rh2AG459800 Rh2BG473100 Rh2CG447100 Rh2DG482000
rosa_wichuraiana	Rw2G037610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2044
AccB7I	CCANNNNNTGG	1 cut(s)	1556
AccBSI	CCGCTC	1 cut(s)	2055
AccII	CGCG	2 cut(s)	389, 2092
AciI	CCGC	4 cut(s)	283, 1451, 1927, 2055
AclWI	GGATC	7 cut(s)	132, 270, 283, 338, 594, 748, 1356
AcoI	YGGCCR	1 cut(s)	1547
AcsI	RAATTY	5 cut(s)	18, 81, 1340, 1616, 2009
AcuI	CTGAAG	2 cut(s)	807, 1763
AfaI	GTAC	8 cut(s)	728, 783, 888, 977, 1066, 1196, 1455, 2164
AfiI	CCNNNNNNNGG	2 cut(s)	264, 1556
AjnI	CCWGG	4 cut(s)	278, 712, 1976, 2136
AjuI	GAANNNNNNNTTGG	4 cut(s)	936, 968, 1584, 1616
AloI	GAACNNNNNNTCC	2 cut(s)	732, 764
Alw21I	GWGCWC	1 cut(s)	1699
Alw26I	GTCTC	3 cut(s)	145, 305, 2030
AlwI	GGATC	7 cut(s)	132, 270, 283, 338, 594, 748, 1356
AlwNI	CAGNNNCTG	1 cut(s)	961
Ama87I	CYCGRG	1 cut(s)	855
AoxI	GGCC	4 cut(s)	1437, 1547, 1857, 1912
ApeKI	GCWGC	6 cut(s)	50, 1394, 1408, 1952, 2058, 2231
ApoI	RAATTY	5 cut(s)	18, 81, 1340, 1616, 2009
Asp700I	GAANNNNTTC	3 cut(s)	362, 1713, 2224
AspLEI	GCGC	1 cut(s)	1749
AspS9I	GGNCC	4 cut(s)	810, 1438, 1913, 1974
AsuC2I	CCSGG	1 cut(s)	1294
AsuHPI	GGTGA	2 cut(s)	709, 728
AsuII	TTCGAA	3 cut(s)	290, 550, 1337
AvaI	CYCGRG	1 cut(s)	855
AvaII	GGWCC	2 cut(s)	810, 1974
BalI	TGGCCA	1 cut(s)	1549
BamHI	GGATCC	1 cut(s)	275
BbsI	GAAGAC	3 cut(s)	678, 810, 1476
Bbv12I	GWGCWC	1 cut(s)	1699
BbvI	GCAGC	6 cut(s)	62, 1381, 1395, 1939, 2070, 2243
BccI	CCATC	3 cut(s)	626, 1103, 1937
BceAI	ACGGC	2 cut(s)	2029, 2342
BcgI	CGANNNNNNTGC	2 cut(s)	124, 158
BciT130I	CCWGG	4 cut(s)	280, 714, 1978, 2138
BciVI	GTATCC	1 cut(s)	950
BclI	TGATCA	2 cut(s)	970, 1963
BcnI	CCSGG	1 cut(s)	1294
BcoDI	GTCTC	3 cut(s)	145, 305, 2030
BfaI	CTAG	6 cut(s)	47, 633, 1068, 1934, 1956, 2031
BfmI	CTRYAG	1 cut(s)	992
BfoI	RGCGCY	1 cut(s)	1750
BfuI	GTATCC	1 cut(s)	950
BisI	GCNGC	7 cut(s)	51, 1395, 1409, 1953, 2056, 2059, 2232
BlsI	GCNGC	7 cut(s)	52, 1396, 1410, 1954, 2057, 2060, 2233
Bme1390I	CCNGG	5 cut(s)	280, 714, 1294, 1978, 2138
Bme18I	GGWCC	2 cut(s)	810, 1974
BmeT110I	CYCGRG	1 cut(s)	855
BmgT120I	GGNCC	4 cut(s)	810, 1438, 1913, 1974
BmiI	GGNNCC	3 cut(s)	277, 811, 1182
BmrFI	CCNGG	5 cut(s)	280, 714, 1294, 1978, 2138
BmsI	GCATC	6 cut(s)	244, 646, 860, 1717, 2181, 2303
BpiI	GAAGAC	3 cut(s)	678, 810, 1476
BpmI	CTGGAG	1 cut(s)	2120
Bpu10I	CCTNAGC	1 cut(s)	450
Bpu14I	TTCGAA	3 cut(s)	290, 550, 1337
BpuEI	CTTGAG	4 cut(s)	461, 533, 662, 1272
BpuMI	CCSGG	1 cut(s)	1294
BsaAI	YACGTR	1 cut(s)	1647
BsaI	GGTCTC	1 cut(s)	2030
Bsc4I	CCNNNNNNNGG	2 cut(s)	264, 1556
Bse118I	RCCGGY	2 cut(s)	1553, 1749
Bse1I	ACTGG	3 cut(s)	23, 474, 1544
Bse3DI	GCAATG	4 cut(s)	140, 588, 1471, 1790
BseBI	CCWGG	4 cut(s)	280, 714, 1978, 2138
BseGI	GGATG	7 cut(s)	406, 933, 1067, 1095, 1624, 2294, 2344
BseLI	CCNNNNNNNGG	2 cut(s)	264, 1556
BseMI	GCAATG	4 cut(s)	140, 588, 1471, 1790
BseMII	CTCAG	5 cut(s)	600, 789, 1841, 1860, 2150
BseNI	ACTGG	3 cut(s)	23, 474, 1544
BseRI	GAGGAG	1 cut(s)	425
BseXI	GCAGC	6 cut(s)	62, 1381, 1395, 1939, 2070, 2243
BsgI	GTGCAG	1 cut(s)	2133
Bsh1236I	CGCG	2 cut(s)	389, 2092
Bsh1285I	CGRYCG	1 cut(s)	733
BshFI	GGCC	4 cut(s)	1439, 1549, 1859, 1914
BsiEI	CGRYCG	1 cut(s)	733
BsiHKAI	GWGCWC	1 cut(s)	1699
BsiHKCI	CYCGRG	1 cut(s)	855
BsiSI	CCGG	3 cut(s)	1294, 1554, 1750
BslFI	GGGAC	1 cut(s)	823
BslI	CCNNNNNNNGG	2 cut(s)	264, 1556
BsmAI	GTCTC	3 cut(s)	145, 305, 2030
BsmBI	CGTCTC	1 cut(s)	145
BsmFI	GGGAC	1 cut(s)	823
BsmI	GAATGC	1 cut(s)	1569
BsnI	GGCC	4 cut(s)	1439, 1549, 1859, 1914
Bso31I	GGTCTC	1 cut(s)	2030
BsoBI	CYCGRG	1 cut(s)	855
Bsp119I	TTCGAA	3 cut(s)	290, 550, 1337
Bsp1286I	GDGCHC	1 cut(s)	1699
Bsp1407I	TGTACA	2 cut(s)	886, 1194
Bsp68I	TCGCGA	2 cut(s)	389, 2092
BspACI	CCGC	4 cut(s)	283, 1451, 1927, 2055
BspANI	GGCC	4 cut(s)	1439, 1549, 1859, 1914
BspCNI	CTCAG	5 cut(s)	601, 790, 1842, 1861, 2151
BspFNI	CGCG	2 cut(s)	389, 2092
BspHI	TCATGA	2 cut(s)	1131, 1758
BspLI	GGNNCC	3 cut(s)	277, 811, 1182
BspMAI	CTGCAG	1 cut(s)	996
BspPI	GGATC	7 cut(s)	132, 270, 283, 338, 594, 748, 1356
BspT104I	TTCGAA	3 cut(s)	290, 550, 1337
BspTNI	GGTCTC	1 cut(s)	2030
BsrBI	CCGCTC	1 cut(s)	2055
BsrDI	GCAATG	4 cut(s)	140, 588, 1471, 1790
BsrFI	RCCGGY	2 cut(s)	1553, 1749
BsrGI	TGTACA	2 cut(s)	886, 1194
BsrI	ACTGG	3 cut(s)	23, 474, 1544
BssAI	RCCGGY	2 cut(s)	1553, 1749
Bst2UI	CCWGG	4 cut(s)	280, 714, 1978, 2138
Bst4CI	ACNGT	6 cut(s)	557, 679, 1500, 1523, 1816, 2002
Bst6I	CTCTTC	2 cut(s)	774, 2115
BstAPI	GCANNNNNTGC	1 cut(s)	1647
BstAUI	TGTACA	2 cut(s)	886, 1194
BstBAI	YACGTR	1 cut(s)	1647
BstBI	TTCGAA	3 cut(s)	290, 550, 1337
BstC8I	GCNNGC	1 cut(s)	1551
BstDEI	CTNAG	8 cut(s)	450, 609, 798, 1718, 1850, 1869, 2159, 2358
BstF5I	GGATG	7 cut(s)	406, 933, 1067, 1095, 1624, 2294, 2344
BstFNI	CGCG	2 cut(s)	389, 2092
BstH2I	RGCGCY	1 cut(s)	1750
BstHHI	GCGC	1 cut(s)	1749
BstMAI	GTCTC	3 cut(s)	145, 305, 2030
BstMCI	CGRYCG	1 cut(s)	733
BstMWI	GCNNNNNNNGC	6 cut(s)	614, 662, 857, 1647, 1792, 1891
BstNI	CCWGG	4 cut(s)	280, 714, 1978, 2138
BstNSI	RCATGY	2 cut(s)	1482, 1571
BstSCI	CCNGG	5 cut(s)	278, 712, 1292, 1976, 2136
BstSFI	CTRYAG	1 cut(s)	992
BstUI	CGCG	2 cut(s)	389, 2092
BstV1I	GCAGC	6 cut(s)	62, 1381, 1395, 1939, 2070, 2243
BstV2I	GAAGAC	3 cut(s)	678, 810, 1476
BstX2I	RGATCY	3 cut(s)	275, 740, 1348
BstYI	RGATCY	3 cut(s)	275, 740, 1348
BsuI	GTATCC	1 cut(s)	950
BsuRI	GGCC	4 cut(s)	1439, 1549, 1859, 1914
BtgZI	GCGATG	1 cut(s)	2073
BtsCI	GGATG	7 cut(s)	406, 933, 1067, 1095, 1624, 2294, 2344
BtsI	GCAGTG	1 cut(s)	2304
BtsIMutI	CAGTG	4 cut(s)	675, 1847, 1973, 2304
BtuMI	TCGCGA	2 cut(s)	389, 2092
Cac8I	GCNNGC	1 cut(s)	1551
CaiI	CAGNNNCTG	1 cut(s)	961
CciI	TCATGA	2 cut(s)	1131, 1758
CfoI	GCGC	1 cut(s)	1749
Cfr10I	RCCGGY	2 cut(s)	1553, 1749
Cfr13I	GGNCC	4 cut(s)	810, 1438, 1913, 1974
Csp6I	GTAC	8 cut(s)	727, 782, 887, 976, 1065, 1195, 1454, 2163
CviQI	GTAC	8 cut(s)	727, 782, 887, 976, 1065, 1195, 1454, 2163
DdeI	CTNAG	8 cut(s)	450, 609, 798, 1718, 1850, 1869, 2159, 2358
DrdI	GACNNNNNNGTC	1 cut(s)	2044
DseDI	GACNNNNNNGTC	1 cut(s)	2044
EaeI	YGGCCR	1 cut(s)	1547
Eam1104I	CTCTTC	2 cut(s)	774, 2115
EarI	CTCTTC	2 cut(s)	774, 2115
Eco31I	GGTCTC	1 cut(s)	2030
Eco47I	GGWCC	2 cut(s)	810, 1974
Eco57I	CTGAAG	2 cut(s)	807, 1763
Eco88I	CYCGRG	1 cut(s)	855
EcoO109I	RGGNCCY	1 cut(s)	1438
EcoRI	GAATTC	2 cut(s)	18, 1616
EcoRII	CCWGG	4 cut(s)	278, 712, 1976, 2136
EcoT22I	ATGCAT	2 cut(s)	1484, 1569
Esp3I	CGTCTC	1 cut(s)	145
FaqI	GGGAC	1 cut(s)	823
FauI	CCCGC	1 cut(s)	276
FbaI	TGATCA	2 cut(s)	970, 1963
Fnu4HI	GCNGC	7 cut(s)	51, 1395, 1409, 1953, 2056, 2059, 2232
FokI	GGATG	7 cut(s)	413, 940, 1074, 1082, 1611, 2281, 2351
Fsp4HI	GCNGC	7 cut(s)	51, 1395, 1409, 1953, 2056, 2059, 2232
FspBI	CTAG	6 cut(s)	47, 633, 1068, 1934, 1956, 2031
GlaI	GCGC	1 cut(s)	1748
GluI	GCNGC	7 cut(s)	51, 1395, 1409, 1953, 2056, 2059, 2232
GsuI	CTGGAG	1 cut(s)	2120
HaeII	RGCGCY	1 cut(s)	1750
HaeIII	GGCC	4 cut(s)	1439, 1549, 1859, 1914
HapII	CCGG	3 cut(s)	1294, 1554, 1750
HhaI	GCGC	1 cut(s)	1749
Hin6I	GCGC	1 cut(s)	1747
HinP1I	GCGC	1 cut(s)	1747
HincII	GTYRAC	1 cut(s)	529
HindII	GTYRAC	1 cut(s)	529
HindIII	AAGCTT	2 cut(s)	1710, 1763
HpaII	CCGG	3 cut(s)	1294, 1554, 1750
HphI	GGTGA	2 cut(s)	709, 728
Hpy166II	GTNNAC	3 cut(s)	529, 1209, 1772
Hpy188I	TCNGA	8 cut(s)	310, 723, 755, 799, 957, 1726, 2071, 2160
Hpy188III	TCNNGA	9 cut(s)	347, 388, 641, 855, 1132, 1184, 1371, 1759, 2091
Hpy8I	GTNNAC	3 cut(s)	529, 1209, 1772
HpyAV	CCTTC	4 cut(s)	130, 557, 582, 1079
HpyCH4III	ACNGT	6 cut(s)	557, 679, 1500, 1523, 1816, 2002
HpyCH4IV	ACGT	2 cut(s)	901, 1646
HpyF10VI	GCNNNNNNNGC	6 cut(s)	614, 662, 857, 1647, 1792, 1891
HpyF3I	CTNAG	8 cut(s)	450, 609, 798, 1718, 1850, 1869, 2159, 2358
HpySE526I	ACGT	2 cut(s)	901, 1646
HspAI	GCGC	1 cut(s)	1747
Ksp22I	TGATCA	2 cut(s)	970, 1963
LmnI	GCTCC	3 cut(s)	412, 1186, 2291
Lsp1109I	GCAGC	6 cut(s)	62, 1381, 1395, 1939, 2070, 2243
LweI	GCATC	6 cut(s)	244, 646, 860, 1717, 2181, 2303
MaeI	CTAG	6 cut(s)	47, 633, 1068, 1934, 1956, 2031
MaeII	ACGT	2 cut(s)	901, 1646
MaeIII	GTNAC	4 cut(s)	186, 1838, 1864, 2278
MbiI	CCGCTC	1 cut(s)	2055
MfeI	CAATTG	2 cut(s)	836, 1040
MflI	RGATCY	3 cut(s)	275, 740, 1348
MhlI	GDGCHC	1 cut(s)	1699
MlsI	TGGCCA	1 cut(s)	1549
MluNI	TGGCCA	1 cut(s)	1549
MlyI	GAGTC	3 cut(s)	620, 1466, 2354
MmeI	TCCRAC	1 cut(s)	1560
Mox20I	TGGCCA	1 cut(s)	1549
Mph1103I	ATGCAT	2 cut(s)	1484, 1569
MroXI	GAANNNNTTC	3 cut(s)	362, 1713, 2224
MscI	TGGCCA	1 cut(s)	1549
MseI	TTAA	7 cut(s)	104, 774, 1157, 1280, 1344, 1754, 2079
MslI	CAYNNNNRTG	2 cut(s)	1254, 1416
Msp20I	TGGCCA	1 cut(s)	1549
MspI	CCGG	3 cut(s)	1294, 1554, 1750
MspR9I	CCNGG	5 cut(s)	280, 714, 1294, 1978, 2138
MunI	CAATTG	2 cut(s)	836, 1040
Mva1269I	GAATGC	1 cut(s)	1569
MvaI	CCWGG	4 cut(s)	280, 714, 1978, 2138
MvnI	CGCG	2 cut(s)	389, 2092
MwoI	GCNNNNNNNGC	6 cut(s)	614, 662, 857, 1647, 1792, 1891
NciI	CCSGG	1 cut(s)	1294
NlaIV	GGNNCC	3 cut(s)	277, 811, 1182
NmeAIII	GCCGAG	1 cut(s)	2260
NmuCI	GTSAC	2 cut(s)	186, 2278
NruI	TCGCGA	2 cut(s)	389, 2092
NsiI	ATGCAT	2 cut(s)	1484, 1569
NspI	RCATGY	2 cut(s)	1482, 1571
NspV	TTCGAA	3 cut(s)	290, 550, 1337
PaeR7I	CTCGAG	1 cut(s)	855
PagI	TCATGA	2 cut(s)	1131, 1758
PctI	GAATGC	1 cut(s)	1569
PdmI	GAANNNNTTC	3 cut(s)	362, 1713, 2224
PfeI	GAWTC	9 cut(s)	305, 709, 791, 894, 1045, 1585, 1685, 1985, 2141
PflFI	GACNNNGTC	1 cut(s)	814
PflMI	CCANNNNNTGG	1 cut(s)	1556
PfoI	TCCNGGA	1 cut(s)	2136
PkrI	GCNGC	7 cut(s)	52, 1396, 1410, 1954, 2057, 2060, 2233
Ple19I	CGATCG	1 cut(s)	733
PleI	GAGTC	3 cut(s)	619, 1466, 2353
PpsI	GAGTC	3 cut(s)	619, 1466, 2353
Ppu21I	YACGTR	1 cut(s)	1647
Psp6I	CCWGG	4 cut(s)	278, 712, 1976, 2136
PspGI	CCWGG	4 cut(s)	278, 712, 1976, 2136
PspN4I	GGNNCC	3 cut(s)	277, 811, 1182
PspPI	GGNCC	4 cut(s)	810, 1438, 1913, 1974
PstI	CTGCAG	1 cut(s)	996
PstNI	CAGNNNCTG	1 cut(s)	961
PsuI	RGATCY	3 cut(s)	275, 740, 1348
PsyI	GACNNNGTC	1 cut(s)	814
PvuI	CGATCG	1 cut(s)	733
RruI	TCGCGA	2 cut(s)	389, 2092
RsaI	GTAC	8 cut(s)	728, 783, 888, 977, 1066, 1196, 1455, 2164
RsaNI	GTAC	8 cut(s)	727, 782, 887, 976, 1065, 1195, 1454, 2163
RseI	CAYNNNNRTG	2 cut(s)	1254, 1416
SaqAI	TTAA	7 cut(s)	104, 774, 1157, 1280, 1344, 1754, 2079
SatI	GCNGC	7 cut(s)	51, 1395, 1409, 1953, 2056, 2059, 2232
Sau96I	GGNCC	4 cut(s)	810, 1438, 1913, 1974
SchI	GAGTC	3 cut(s)	620, 1466, 2354
ScrFI	CCNGG	5 cut(s)	280, 714, 1294, 1978, 2138
SduI	GDGCHC	1 cut(s)	1699
SfaNI	GCATC	6 cut(s)	244, 646, 860, 1717, 2181, 2303
SfcI	CTRYAG	1 cut(s)	992
Sfr274I	CTCGAG	1 cut(s)	855
SfuI	TTCGAA	3 cut(s)	290, 550, 1337
SinI	GGWCC	2 cut(s)	810, 1974
SlaI	CTCGAG	1 cut(s)	855
SmiMI	CAYNNNNRTG	2 cut(s)	1254, 1416
SmlI	CTYRAG	5 cut(s)	440, 512, 641, 855, 1287
SmoI	CTYRAG	5 cut(s)	440, 512, 641, 855, 1287
SsiI	CCGC	4 cut(s)	283, 1451, 1927, 2055
SspMI	CTAG	6 cut(s)	47, 633, 1068, 1934, 1956, 2031
StyD4I	CCNGG	5 cut(s)	278, 712, 1292, 1976, 2136
TaaI	ACNGT	6 cut(s)	557, 679, 1500, 1523, 1816, 2002
TaiI	ACGT	2 cut(s)	904, 1649
TaqI	TCGA	8 cut(s)	127, 134, 290, 550, 856, 1337, 1988, 2267
TatI	WGTACW	5 cut(s)	886, 975, 1064, 1194, 2162
TauI	GCSGC	1 cut(s)	2058
TfiI	GAWTC	9 cut(s)	305, 709, 791, 894, 1045, 1585, 1685, 1985, 2141
Tru1I	TTAA	7 cut(s)	104, 774, 1157, 1280, 1344, 1754, 2079
Tru9I	TTAA	7 cut(s)	104, 774, 1157, 1280, 1344, 1754, 2079
TscAI	CASTG	4 cut(s)	682, 1854, 1973, 2311
TseFI	GTSAC	2 cut(s)	186, 2278
TseI	GCWGC	6 cut(s)	50, 1394, 1408, 1952, 2058, 2231
Tsp45I	GTSAC	2 cut(s)	186, 2278
TspGWI	ACGGA	2 cut(s)	211, 2215
TspRI	CASTG	4 cut(s)	682, 1854, 1973, 2311
Tth111I	GACNNNGTC	1 cut(s)	814
Van91I	CCANNNNNTGG	1 cut(s)	1556
VpaK11BI	GGWCC	2 cut(s)	810, 1974
XapI	RAATTY	5 cut(s)	18, 81, 1340, 1616, 2009
XceI	RCATGY	2 cut(s)	1482, 1571
XcmI	CCANNNNNNNNNTGG	1 cut(s)	30
XhoI	CTCGAG	1 cut(s)	855
XmnI	GAANNNNTTC	3 cut(s)	362, 1713, 2224
XspI	CTAG	6 cut(s)	47, 633, 1068, 1934, 1956, 2031
Zsp2I	ATGCAT	2 cut(s)	1484, 1569

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.