Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0003362

Physical Location & Seq

Genomic Coordinates Forward (+)

60565778 .. 60572553

Gene Structure 6776 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG447100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2235 bp

ATGGTTGCTATTGGGTCTGCAGCATTGCCATTGAGACGATTCGATAGCTCAATGGAGGACGACGGGTCGTATAAACGGGGTAGGAAGAAAATGGGTATGTCTAGAAAGCCAGAAAAACAAGGTCAAGGTCAAGGTCAAGGTCAAGGTCGGTCCTTTGATGCTGGTGTTCGTAAAACTGCATCCGGGCGGGGCTCGAATCGGGAGAGCTATTCGGCACCGCAGACTGTTGTGAGGAAACAGGTTGACCCCGAAACCGCAAAGTACTTTTCGGAGATTGCTAACCTTTTCGAGAGTGATGGGATTGATATTGAGGAGCGGTCGTCTTTATGTAGTAATGCACTTGAAGAAACTAGGGGGAAAGAGCTGGAGCTTGCGACGGATTATATTATTAGTCACACTTTGCAGACTCTAGTTGAGGGCTGTGAAGTTGATTGCCTTTGTGCTTTTCTCCGAAGCTGTGCGAAGAACTTCCCTTTGATTGCAATGGATAAGTCTGGATCTCATGTAGCTGAGTCTGCCATCAGGGCTTTATCTAAGCATCTTCAGGAGAGTGATGCGTATGCCGTTATTGAGGACACTCTAAATACAATCTGCAAGGTGATTGTGAAGAATCCTGTTGATCTGATGTGTGATTGTTACGGATCTCATGTTCTACGAAGTCTTCTCTCTCTTTTTAAAGGAGTGCCATTGGATTCTTCTGAGTTCCGAATGAGGAAGTCATCTTCTGCCCTACCAGAACGGTTTAATTTCAAGGCACCTCGATCAGACACAGATGTTTCACCACATGTTAGACCTGGATTCCCGGATTTACTTAAGTTTCTTGTTTCCGGGATGTTAAAATGTGCTCGAAACAACATTAAAACCCTGCAAGTTGATCAGTACAGCAGTTTGGTTCTACAGACTACTCTGAAGTTGTTAGCAGGGGATGAAGAAGAGCTGATGCAAATAATTCCCATTCTTATTGGATGTACCAGGGAAGATATTGTAGAGGAGAACTCCATTGAACCAACTATCGTGAGAGATGTTTTAGGTTTGATGAAAGAAACAGCATTTAGCCATTTAATGGAGGTTGTTTTGGAAGTAGCTCCTGAAGTCTTGTACAATGGAATCTTCTCAAAGATCTTCAGGAACTCTTTATTTGACCTTTCGTCCCATCATTGTGGGAATTTTGTCATCCAAGCACTTATTTCTCATACAAGGGATCAGGATCAAATGGAGATAATCTGGGAGGAACTTGGTTCGAATTTCAAGGATCTGCTTAAAATGGGAAGATCTGGTGTTATTGCTTCGCTTATCGCTGCAAGTCAAAGGCTTCATAGTTACGAACACAAGTGTTGTCAGGCTCTTGCTGCTGCAGTATATTCAAGCAGTGAGTCTTCAACATGCATTGTTCCCCGTATACTGTTTCTTGATAGCTACTTCAATTGTGAAGATAAGTCTAATTGGAGTTGGCCAAGTGGTGTTAAAATGCACGTCATGGGTTCTTTGATACTGCAAGAAGTTTTTCGATTTCAAATTGAATTTATACAGCCTTTTATTACAAGTATTACATCCATCACAGCTGATAATGTCCTTGAAGCTGCTAAGGATCCAGGGGGTGCTCGTGTTATTGAAGCATTTTTAAGTTCTAATGCTTCTGCAAAACTGAAACGCCGATTAGTTATGAGGCTTCGTGGACATTTTGGAGAGCTAGCATTGCACTCGTCAGGTTCCTTTACTGTTGAAAAGTGCTTTACTACTGGTAACATTTCACAGAGGGAAGCCATAGTATCTGAGTTGGTAACCGTGCAAAGTGAGCTTTGGAATACAAGGCAAGGTCCTCATCTTATGAGGAAACTAGATGTTGATGGATTTGCTGCTAGACCTGAGCAGTGGAGGTCCAGACAAGAATCAAAGCAATCAACTTTGAGAGACTTTTCTGCTACATTTGGCTCTAGTGAGACCAAACCATCAAACAATAGTGAGACTGAGCAATCAAAGAAGAGCAGCTTTCTTTCTGATGATTATAAGAAAAAATCAAAAGTGGGAAAAACAGTTGACCATCACCAGGCATCTCCTGCACCATTTTTGAGTACAACAGGCTTCAAACGTAAGCCCAAGGAAAAAGAACAGAGCAACAAGAAGTTTGCAAGAGTCTCGGTAGATGAGGATGTTTCTAAAGTGAAGAATAAGTCAAAGAAGAAAAGGCATGGTGACGATGCTTTTTCTAAATCCCCCAAGAAGTTGAAAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0010033 GO:0010252 GO:0031974 GO:0031981 GO:0034284 GO:0034285 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048878 GO:0050896 GO:0065007 GO:0065008 GO:0070013 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUF

Protein Analysis

744

Amino Acids

82.92

Weight (kDa)

8.66

Isoelectric Point (pI)

49.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUF_NOP9	PF22493	119 - 603	2.2e-67	NOP9-like PUF repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72320 AT1G72320 AT1G72320 AT1G72320
fragaria_vesca	FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860
malus_domestica	MD09G1172500.v1.1
prunus_persica	Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1
pyrus_communis	pycom09g09000
rosa_chinensis	RchiOBHm_Chr2g0147901
rosa_laevigata	RLG00000020291
rosa_multiflora	Rmu_sc0000308.1_g000059
rosa_roxburghii	Rroxscaffold_2G00099210
rosa_rugosa	Rorug02G0402900
rosa_samantha	Rh2AG459800 Rh2BG473100 Rh2CG447100 Rh2DG482000
rosa_wichuraiana	Rw2G037610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2007
AccB1I	GGYRCC	2 cut(s)	214, 754
AccB7I	CCANNNNNTGG	1 cut(s)	1063
AccBSI	CCGCTC	1 cut(s)	316
AccI	GTMKAC	1 cut(s)	1399
AciI	CCGC	4 cut(s)	187, 218, 255, 316
AclWI	GGATC	7 cut(s)	505, 649, 1209, 1215, 1260, 1583, 1596
AcoI	YGGCCR	1 cut(s)	1451
AcsI	RAATTY	3 cut(s)	1165, 1243, 1520
AcuI	CTGAAG	4 cut(s)	527, 929, 1108, 1110
AfaI	GTAC	5 cut(s)	263, 881, 970, 1100, 2074
AfiI	CCNNNNNNNGG	2 cut(s)	1063, 2047
AflII	CTTAAG	1 cut(s)	812
AflIII	ACRYGT	1 cut(s)	784
AhdI	GACNNNNNGTC	2 cut(s)	64, 1147
AjiI	CACGTC	1 cut(s)	1474
AjnI	CCWGG	4 cut(s)	793, 971, 1591, 2046
AloI	GAACNNNNNNTCC	2 cut(s)	633, 665
Alw21I	GWGCWC	2 cut(s)	847, 1603
Alw26I	GTCTC	5 cut(s)	28, 1905, 1934, 1958, 2140
AlwI	GGATC	7 cut(s)	505, 649, 1209, 1215, 1260, 1583, 1596
AoxI	GGCC	1 cut(s)	1451
ApeKI	GCWGC	7 cut(s)	20, 1298, 1349, 1352, 1580, 1856, 1986
ApoI	RAATTY	3 cut(s)	1165, 1243, 1520
Asp700I	GAANNNNTTC	2 cut(s)	467, 1503
AspS9I	GGNCC	3 cut(s)	150, 1817, 1878
AsuC2I	CCSGG	3 cut(s)	184, 803, 829
AsuHPI	GGTGA	4 cut(s)	610, 771, 2036, 2204
AsuII	TTCGAA	1 cut(s)	1241
AsuNHI	GCTAGC	1 cut(s)	1690
AvaII	GGWCC	3 cut(s)	150, 1817, 1878
BalI	TGGCCA	1 cut(s)	1453
BamHI	GGATCC	1 cut(s)	1588
BanI	GGYRCC	2 cut(s)	214, 754
BanII	GRGCYC	1 cut(s)	194
BauI	CACGAG	1 cut(s)	1602
BbsI	GAAGAC	2 cut(s)	653, 1368
Bbv12I	GWGCWC	2 cut(s)	847, 1603
BbvI	GCAGC	7 cut(s)	32, 1285, 1336, 1339, 1567, 1843, 1998
BccI	CCATC	7 cut(s)	290, 527, 1161, 1562, 1841, 1957, 2049
BceAI	ACGGC	1 cut(s)	548
BcgI	CGANNNNNNTGC	4 cut(s)	1683, 1717, 2118, 2152
BciT130I	CCWGG	4 cut(s)	795, 973, 1593, 2048
BclI	TGATCA	1 cut(s)	874
BcnI	CCSGG	3 cut(s)	184, 803, 829
BcoDI	GTCTC	5 cut(s)	28, 1905, 1934, 1958, 2140
BfaI	CTAG	7 cut(s)	102, 351, 410, 1691, 1838, 1860, 1935
BfmI	CTRYAG	3 cut(s)	18, 896, 1353
BfrI	CTTAAG	1 cut(s)	812
BglI	GCCNNNNNGGC	1 cut(s)	524
BglII	AGATCT	2 cut(s)	1119, 1271
BisI	GCNGC	7 cut(s)	21, 1299, 1350, 1353, 1581, 1857, 1987
BlsI	GCNGC	7 cut(s)	22, 1300, 1351, 1354, 1582, 1858, 1988
BmcAI	AGTACT	1 cut(s)	263
Bme1390I	CCNGG	7 cut(s)	184, 795, 803, 829, 973, 1593, 2048
Bme18I	GGWCC	3 cut(s)	150, 1817, 1878
BmeRI	GACNNNNNGTC	2 cut(s)	64, 1147
BmgBI	CACGTC	1 cut(s)	1474
BmgT120I	GGNCC	3 cut(s)	150, 1817, 1878
BmiI	GGNNCC	4 cut(s)	216, 756, 1590, 1711
BmrFI	CCNGG	7 cut(s)	184, 795, 803, 829, 973, 1593, 2048
BmsI	GCATC	7 cut(s)	148, 188, 544, 547, 930, 2060, 2188
BmtI	GCTAGC	1 cut(s)	1694
BpiI	GAAGAC	2 cut(s)	653, 1368
BplI	GAGNNNNNCTC	2 cut(s)	980, 1012
BpmI	CTGGAG	1 cut(s)	386
Bpu10I	CCTNAGC	2 cut(s)	1584, 1866
Bpu14I	TTCGAA	1 cut(s)	1241
BpuMI	CCSGG	3 cut(s)	184, 803, 829
BsaBI	GATNNNNATC	1 cut(s)	1206
BsaI	GGTCTC	1 cut(s)	1934
BsaJI	CCNNGG	3 cut(s)	972, 1592, 2097
BsaXI	ACNNNNNCTCC	2 cut(s)	305, 335
Bsc4I	CCNNNNNNNGG	2 cut(s)	1063, 2047
Bse1I	ACTGG	1 cut(s)	1744
Bse3DI	GCAATG	3 cut(s)	23, 489, 1694
Bse8I	GATNNNNATC	1 cut(s)	1206
BseBI	CCWGG	4 cut(s)	795, 973, 1593, 2048
BseDI	CCNNGG	3 cut(s)	972, 1592, 2097
BseGI	GGATG	7 cut(s)	179, 837, 931, 971, 1173, 1550, 2155
BseJI	GATNNNNATC	1 cut(s)	1206
BseLI	CCNNNNNNNGG	2 cut(s)	1063, 2047
BseMI	GCAATG	3 cut(s)	23, 489, 1694
BseMII	CTCAG	5 cut(s)	501, 690, 1764, 1857, 1959
BseNI	ACTGG	1 cut(s)	1744
BseRI	GAGGAG	2 cut(s)	326, 1004
BseXI	GCAGC	7 cut(s)	32, 1285, 1336, 1339, 1567, 1843, 1998
BsgI	GTGCAG	1 cut(s)	2043
Bsh1285I	CGRYCG	1 cut(s)	320
BshFI	GGCC	1 cut(s)	1453
BshNI	GGYRCC	2 cut(s)	214, 754
BsiEI	CGRYCG	1 cut(s)	320
BsiHKAI	GWGCWC	2 cut(s)	847, 1603
BsiSI	CCGG	3 cut(s)	183, 803, 828
BslFI	GGGAC	1 cut(s)	1135
BslI	CCNNNNNNNGG	2 cut(s)	1063, 2047
BsmAI	GTCTC	5 cut(s)	28, 1905, 1934, 1958, 2140
BsmBI	CGTCTC	1 cut(s)	28
BsmFI	GGGAC	1 cut(s)	1135
BsnI	GGCC	1 cut(s)	1453
Bso31I	GGTCTC	1 cut(s)	1934
Bsp119I	TTCGAA	1 cut(s)	1241
Bsp1286I	GDGCHC	3 cut(s)	194, 847, 1603
Bsp1407I	TGTACA	1 cut(s)	1098
BspACI	CCGC	4 cut(s)	187, 218, 255, 316
BspANI	GGCC	1 cut(s)	1453
BspCNI	CTCAG	5 cut(s)	502, 691, 1765, 1858, 1960
BspLI	GGNNCC	4 cut(s)	216, 756, 1590, 1711
BspMAI	CTGCAG	2 cut(s)	22, 1357
BspOI	GCTAGC	1 cut(s)	1694
BspPI	GGATC	7 cut(s)	505, 649, 1209, 1215, 1260, 1583, 1596
BspQI	GCTCTTC	2 cut(s)	927, 1976
BspT104I	TTCGAA	1 cut(s)	1241
BspT107I	GGYRCC	2 cut(s)	214, 754
BspTI	CTTAAG	1 cut(s)	812
BspTNI	GGTCTC	1 cut(s)	1934
BsrBI	CCGCTC	1 cut(s)	316
BsrDI	GCAATG	3 cut(s)	23, 489, 1694
BsrGI	TGTACA	1 cut(s)	1098
BsrI	ACTGG	1 cut(s)	1744
BssECI	CCNNGG	3 cut(s)	972, 1592, 2097
BssNAI	GTATAC	1 cut(s)	1400
BssSI	CACGAG	1 cut(s)	1602
BssT1I	CCWWGG	1 cut(s)	2097
Bst1107I	GTATAC	1 cut(s)	1400
Bst2BI	CACGAG	1 cut(s)	1602
Bst2UI	CCWGG	4 cut(s)	795, 973, 1593, 2048
Bst4CI	ACNGT	6 cut(s)	226, 741, 1404, 1720, 1786, 2035
Bst6I	CTCTTC	2 cut(s)	927, 1976
BstAFI	CTTAAG	1 cut(s)	812
BstAPI	GCANNNNNTGC	1 cut(s)	2057
BstAUI	TGTACA	1 cut(s)	1098
BstBI	TTCGAA	1 cut(s)	1241
BstC8I	GCNNGC	2 cut(s)	372, 1692
BstDEI	CTNAG	7 cut(s)	510, 534, 699, 1584, 1773, 1866, 1968
BstEII	GGTNACC	1 cut(s)	1780
BstF5I	GGATG	7 cut(s)	179, 837, 931, 971, 1173, 1550, 2155
BstMAI	GTCTC	5 cut(s)	28, 1905, 1934, 1958, 2140
BstMCI	CGRYCG	1 cut(s)	320
BstMWI	GCNNNNNNNGC	6 cut(s)	515, 524, 1349, 1696, 1795, 2057
BstNI	CCWGG	4 cut(s)	795, 973, 1593, 2048
BstNSI	RCATGY	2 cut(s)	788, 1386
BstPI	GGTNACC	1 cut(s)	1780
BstSCI	CCNGG	7 cut(s)	182, 793, 801, 827, 971, 1591, 2046
BstSFI	CTRYAG	3 cut(s)	18, 896, 1353
BstV1I	GCAGC	7 cut(s)	32, 1285, 1336, 1339, 1567, 1843, 1998
BstV2I	GAAGAC	2 cut(s)	653, 1368
BstX2I	RGATCY	6 cut(s)	497, 641, 1119, 1252, 1271, 1588
BstXI	CCANNNNNNTGG	1 cut(s)	1160
BstYI	RGATCY	6 cut(s)	497, 641, 1119, 1252, 1271, 1588
BstZ17I	GTATAC	1 cut(s)	1400
BsuRI	GGCC	1 cut(s)	1453
BtrI	CACGTC	1 cut(s)	1474
BtsCI	GGATG	7 cut(s)	179, 837, 931, 971, 1173, 1550, 2155
BtsI	GCAGTG	2 cut(s)	1375, 1877
BtsIMutI	CAGTG	2 cut(s)	1375, 1877
Cac8I	GCNNGC	2 cut(s)	372, 1692
Cfr13I	GGNCC	3 cut(s)	150, 1817, 1878
Csp6I	GTAC	5 cut(s)	262, 880, 969, 1099, 2073
CviAII	CATG	7 cut(s)	503, 647, 785, 1383, 1477, 2189, 2232
CviQI	GTAC	5 cut(s)	262, 880, 969, 1099, 2073
DdeI	CTNAG	7 cut(s)	510, 534, 699, 1584, 1773, 1866, 1968
DraI	TTTAAA	1 cut(s)	676
DriI	GACNNNNNGTC	2 cut(s)	64, 1147
EaeI	YGGCCR	1 cut(s)	1451
Eam1104I	CTCTTC	2 cut(s)	927, 1976
Eam1105I	GACNNNNNGTC	2 cut(s)	64, 1147
EarI	CTCTTC	2 cut(s)	927, 1976
Eco130I	CCWWGG	1 cut(s)	2097
Eco24I	GRGCYC	1 cut(s)	194
Eco31I	GGTCTC	1 cut(s)	1934
Eco47I	GGWCC	3 cut(s)	150, 1817, 1878
Eco57I	CTGAAG	4 cut(s)	527, 929, 1108, 1110
Eco91I	GGTNACC	1 cut(s)	1780
EcoO109I	RGGNCCY	1 cut(s)	1817
EcoO65I	GGTNACC	1 cut(s)	1780
EcoRII	CCWGG	4 cut(s)	793, 971, 1591, 2046
EcoT14I	CCWWGG	1 cut(s)	2097
EcoT22I	ATGCAT	1 cut(s)	1388
EcoT38I	GRGCYC	1 cut(s)	194
ErhI	CCWWGG	1 cut(s)	2097
Esp3I	CGTCTC	1 cut(s)	28
FaeI	CATG	7 cut(s)	506, 650, 788, 1386, 1480, 2192, 2235
FalI	AAGNNNNNCTT	2 cut(s)	1973, 2005
FaqI	GGGAC	1 cut(s)	1135
FatI	CATG	7 cut(s)	502, 646, 784, 1382, 1476, 2188, 2231
FauI	CCCGC	1 cut(s)	180
FbaI	TGATCA	1 cut(s)	874
FblI	GTMKAC	1 cut(s)	1399
Fnu4HI	GCNGC	7 cut(s)	21, 1299, 1350, 1353, 1581, 1857, 1987
FokI	GGATG	7 cut(s)	166, 844, 938, 978, 1160, 1537, 2162
FriOI	GRGCYC	1 cut(s)	194
Fsp4HI	GCNGC	7 cut(s)	21, 1299, 1350, 1353, 1581, 1857, 1987
FspBI	CTAG	7 cut(s)	102, 351, 410, 1691, 1838, 1860, 1935
GluI	GCNGC	7 cut(s)	21, 1299, 1350, 1353, 1581, 1857, 1987
GsuI	CTGGAG	1 cut(s)	386
HaeIII	GGCC	1 cut(s)	1453
HapII	CCGG	3 cut(s)	183, 803, 828
Hin1II	CATG	7 cut(s)	506, 650, 788, 1386, 1480, 2192, 2235
HincII	GTYRAC	2 cut(s)	244, 2038
HindII	GTYRAC	2 cut(s)	244, 2038
HpaII	CCGG	3 cut(s)	183, 803, 828
HphI	GGTGA	4 cut(s)	610, 771, 2036, 2204
Hpy166II	GTNNAC	4 cut(s)	244, 1400, 1676, 2038
Hpy188I	TCNGA	9 cut(s)	271, 452, 624, 700, 707, 766, 909, 1774, 1999
Hpy8I	GTNNAC	4 cut(s)	244, 1400, 1676, 2038
Hpy99I	CGWCG	2 cut(s)	65, 379
HpyCH4III	ACNGT	6 cut(s)	226, 741, 1404, 1720, 1786, 2035
HpyCH4IV	ACGT	2 cut(s)	1473, 2089
HpyF10VI	GCNNNNNNNGC	6 cut(s)	515, 524, 1349, 1696, 1795, 2057
HpyF3I	CTNAG	7 cut(s)	510, 534, 699, 1584, 1773, 1866, 1968
HpySE526I	ACGT	2 cut(s)	1473, 2089
Hsp92II	CATG	7 cut(s)	506, 650, 788, 1386, 1480, 2192, 2235
Ksp22I	TGATCA	1 cut(s)	874
LguI	GCTCTTC	2 cut(s)	927, 1976
LmnI	GCTCC	3 cut(s)	313, 367, 1090
Lsp1109I	GCAGC	7 cut(s)	32, 1285, 1336, 1339, 1567, 1843, 1998
LweI	GCATC	7 cut(s)	148, 188, 544, 547, 930, 2060, 2188
MaeI	CTAG	7 cut(s)	102, 351, 410, 1691, 1838, 1860, 1935
MaeII	ACGT	2 cut(s)	1473, 2089
MaeIII	GTNAC	6 cut(s)	392, 635, 1319, 1742, 1780, 2192
MbiI	CCGCTC	1 cut(s)	316
MfeI	CAATTG	1 cut(s)	1423
MflI	RGATCY	6 cut(s)	497, 641, 1119, 1252, 1271, 1588
MhlI	GDGCHC	3 cut(s)	194, 847, 1603
MlsI	TGGCCA	1 cut(s)	1453
MluCI	AATT	8 cut(s)	745, 948, 1165, 1243, 1423, 1441, 1515, 1520
MluNI	TGGCCA	1 cut(s)	1453
MlyI	GAGTC	4 cut(s)	400, 521, 1382, 2142
Mox20I	TGGCCA	1 cut(s)	1453
Mph1103I	ATGCAT	1 cut(s)	1388
MroXI	GAANNNNTTC	2 cut(s)	467, 1503
MscI	TGGCCA	1 cut(s)	1453
MseI	TTAA	9 cut(s)	675, 744, 813, 836, 858, 1061, 1260, 1464, 1622
MslI	CAYNNNNRTG	1 cut(s)	1158
Msp20I	TGGCCA	1 cut(s)	1453
MspA1I	CMGCKG	1 cut(s)	1562
MspCI	CTTAAG	1 cut(s)	812
MspI	CCGG	3 cut(s)	183, 803, 828
MspR9I	CCNGG	7 cut(s)	184, 795, 803, 829, 973, 1593, 2048
MunI	CAATTG	1 cut(s)	1423
MvaI	CCWGG	4 cut(s)	795, 973, 1593, 2048
MwoI	GCNNNNNNNGC	6 cut(s)	515, 524, 1349, 1696, 1795, 2057
NciI	CCSGG	3 cut(s)	184, 803, 829
NheI	GCTAGC	1 cut(s)	1690
NlaIII	CATG	7 cut(s)	506, 650, 788, 1386, 1480, 2192, 2235
NlaIV	GGNNCC	4 cut(s)	216, 756, 1590, 1711
NmuCI	GTSAC	2 cut(s)	392, 2192
NsiI	ATGCAT	1 cut(s)	1388
NspI	RCATGY	2 cut(s)	788, 1386
NspV	TTCGAA	1 cut(s)	1241
PciI	ACATGT	1 cut(s)	784
PciSI	GCTCTTC	2 cut(s)	927, 1976
PdmI	GAANNNNTTC	2 cut(s)	467, 1503
PfeI	GAWTC	7 cut(s)	39, 196, 610, 692, 798, 1107, 1889
PflMI	CCANNNNNTGG	1 cut(s)	1063
PfoI	TCCNGGA	2 cut(s)	801, 827
PkrI	GCNGC	7 cut(s)	22, 1300, 1351, 1354, 1582, 1858, 1988
PleI	GAGTC	4 cut(s)	400, 520, 1381, 2141
PpsI	GAGTC	4 cut(s)	400, 520, 1381, 2141
PpuMI	RGGWCCY	1 cut(s)	1817
PscI	ACATGT	1 cut(s)	784
PsiI	TTATAA	1 cut(s)	2007
Psp5II	RGGWCCY	1 cut(s)	1817
Psp6I	CCWGG	4 cut(s)	793, 971, 1591, 2046
PspEI	GGTNACC	1 cut(s)	1780
PspGI	CCWGG	4 cut(s)	793, 971, 1591, 2046
PspN4I	GGNNCC	4 cut(s)	216, 756, 1590, 1711
PspPI	GGNCC	3 cut(s)	150, 1817, 1878
PspPPI	RGGWCCY	1 cut(s)	1817
PstI	CTGCAG	2 cut(s)	22, 1357
PsuI	RGATCY	6 cut(s)	497, 641, 1119, 1252, 1271, 1588
PvuII	CAGCTG	1 cut(s)	1562
RsaI	GTAC	5 cut(s)	263, 881, 970, 1100, 2074
RsaNI	GTAC	5 cut(s)	262, 880, 969, 1099, 2073
RseI	CAYNNNNRTG	1 cut(s)	1158
SapI	GCTCTTC	2 cut(s)	927, 1976
SaqAI	TTAA	9 cut(s)	675, 744, 813, 836, 858, 1061, 1260, 1464, 1622
SatI	GCNGC	7 cut(s)	21, 1299, 1350, 1353, 1581, 1857, 1987
Sau96I	GGNCC	3 cut(s)	150, 1817, 1878
ScaI	AGTACT	1 cut(s)	263
SchI	GAGTC	4 cut(s)	400, 521, 1382, 2142
ScrFI	CCNGG	7 cut(s)	184, 795, 803, 829, 973, 1593, 2048
SduI	GDGCHC	3 cut(s)	194, 847, 1603
SfaNI	GCATC	7 cut(s)	148, 188, 544, 547, 930, 2060, 2188
SfcI	CTRYAG	3 cut(s)	18, 896, 1353
SfuI	TTCGAA	1 cut(s)	1241
SinI	GGWCC	3 cut(s)	150, 1817, 1878
SmiMI	CAYNNNNRTG	1 cut(s)	1158
SmlI	CTYRAG	1 cut(s)	812
SmoI	CTYRAG	1 cut(s)	812
Sse9I	AATT	8 cut(s)	745, 948, 1165, 1243, 1423, 1441, 1515, 1520
SsiI	CCGC	4 cut(s)	187, 218, 255, 316
SspMI	CTAG	7 cut(s)	102, 351, 410, 1691, 1838, 1860, 1935
StyD4I	CCNGG	7 cut(s)	182, 793, 801, 827, 971, 1591, 2046
StyI	CCWWGG	1 cut(s)	2097
TaaI	ACNGT	6 cut(s)	226, 741, 1404, 1720, 1786, 2035
TaiI	ACGT	2 cut(s)	1476, 2092
TaqI	TCGA	7 cut(s)	42, 194, 288, 760, 847, 1241, 1507
TaqII	GACCGA	1 cut(s)	138
TasI	AATT	8 cut(s)	745, 948, 1165, 1243, 1423, 1441, 1515, 1520
TatI	WGTACW	4 cut(s)	261, 879, 1098, 2072
TfiI	GAWTC	7 cut(s)	39, 196, 610, 692, 798, 1107, 1889
Tru1I	TTAA	9 cut(s)	675, 744, 813, 836, 858, 1061, 1260, 1464, 1622
Tru9I	TTAA	9 cut(s)	675, 744, 813, 836, 858, 1061, 1260, 1464, 1622
TscAI	CASTG	2 cut(s)	1375, 1877
TseFI	GTSAC	2 cut(s)	392, 2192
TseI	GCWGC	7 cut(s)	20, 1298, 1349, 1352, 1580, 1856, 1986
Tsp45I	GTSAC	2 cut(s)	392, 2192
TspDTI	ATGAA	3 cut(s)	942, 1052, 1304
TspGWI	ACGGA	2 cut(s)	392, 654
TspRI	CASTG	2 cut(s)	1375, 1877
Van91I	CCANNNNNTGG	1 cut(s)	1063
Vha464I	CTTAAG	1 cut(s)	812
VpaK11BI	GGWCC	3 cut(s)	150, 1817, 1878
XapI	RAATTY	3 cut(s)	1165, 1243, 1520
XbaI	TCTAGA	1 cut(s)	101
XceI	RCATGY	2 cut(s)	788, 1386
XmiI	GTMKAC	1 cut(s)	1399
XmnI	GAANNNNTTC	2 cut(s)	467, 1503
XspI	CTAG	7 cut(s)	102, 351, 410, 1691, 1838, 1860, 1935
ZrmI	AGTACT	1 cut(s)	263
Zsp2I	ATGCAT	1 cut(s)	1388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.