Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003362

Physical Location & Seq

Genomic Coordinates Forward (+)

51477870 .. 51483726

Gene Structure 5857 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0402900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGAGCTCCACCACCCCTCCTTTATTTAAAGCTTTCAACTACTACTGCAGGTCGCTCTTCTCCTCTTCTTATTCATCTTGTTCGCGTTTCAAGGCCTCCCGCTATCTCACCAGGATCAACCCTTTGCTCTGCTTGTCACACTCTCGCCTTTTCTCTTCCTTGCAATCTGGTTCATCTATGGAGGCGGTAAAAGTAGCTAGTCAAGGTTCTGGAACTCAGGATAGTGTTGCTGTTAGATCAGATAACAAGAGTTACAGTTACAATCAACTAATTTCTTCTGCACGGAGTATATCTGGCTTGTTATGTTGTGGCGACTTAAAAACTTCCAAAGCAAGTAGCCATCAATCTCCTTTAGCAACAACAGATGGTGCACGAGGACTTGGGCATCTTGGAGGGGCTAGAATAGGTATTGTGGCTAAGCCCTCCGCGGAATTCGTTGCTGGTATACTTGGGACTTGGCTTAGTGGAGGTGTTGCAGTTCCACTTGCTCTGAGCCACCCTGAGGCTGAGCTCTTGCATGTGATGAATGATTCAGACATCTCCATGATATTGAGTACTGAAGATCATCAACAACTTATGGAAAACCTTGCTGCTAAATGTGCTGCTCAGTTTTCTCTTATTCCACCAGTTCCCAGTAGTGCTACTTCACATGCAAGTGCAGGTGGTCATTTACAAGCGGGAGAAGTAGATGCAGATAGAATTTTTCACAGGAATGGGAAGCAATCAAGTGAGGATCCAGCATTAATAATATACACTAGTGGTACAACGGGTAAACCTAAAGGAGTTGTTCACACTCACAAAAGCATCAGTGCGCAGGTCCAAACCTTGGCAGAAGCTTGGGAGTATTCATCTGCTGATCAGTTTTTGCATTGTCTACCACTACATCATATCCGTTCAATTTTGTATACTTGTGTGCAAATACTGTTTTTGAATACAATTGGAGCTTCCATTTTGCTTTCTGTCTTCAATGTCTCCTTTCCTGTGAGAAACTTGATTGATCCTGAGAATAATCCTTGTTGGGGTTATGGCTTAGTTGATGATTTGATGGTTGAGTTTATGCCGAAGTTTAGTGTGAGGGGTATTTGGCAGAGATGGCGTGAAGCATATCCGAAAAATGGAACTAAGGCAGATGAGGGCATAACTGTCTTTACTGGAGTACCGACCATGTATACTCGATTGATACAAGCTCATGAAGCCATGGATGCGGAGCTAAAAGCTGCATCTGCCTATGCTGCACAACAGTTGCGTCTTATGATGTGTGGTTCCTCTGCACTCCCTGTTCCTGTAATGCAGCAATGGGAAACTATCACAGGGCATCGTCTTCTGGAACGATACGGCATGACAGAGTTTGTGATGGCAATATCAAATCCCTTCAGAGGTGAACGGAAGGCAGGCACGGTTGGAAAACCATTTCCTGGTGTGGAGGTAAAGATCGTTGCAGAAGATGATAGTAAAAGTGATACGATGGTCGTGGGTGAGCTTTGCGTTAGAAGCCCTTCATTGTTCAAGGAATATTGGAAACTTCCTGAGGTAACTAGAGAATCATTTACAAATGATGGGTTCTTCAAGACAGGGGATGCTGGTACAGTGGATAAAGATGGCTACTACATCATATTGGGACGTACAAGCGCAGATATAATGAAGGTTGGTGGATACAAGTTATCAGCATTAGAAATTGAATCAATTCTTTTAGAGCACCCATCTGTAGAGGAGTGTTGTGTATTGGGCTTACCGGACAAAGATTATGGAGAAATTGTCTGTGCAATAGTAGTGCCAGATGTGGAAGCAAAGAGGAAACAAGAGGAAGAAAAGAAACCTGCCATAAGCTTGGAAGAGCTATGCTCTGGGGCTAAACACAAACTTGCACCATACAAGCTACCAACACGACTTTTTGTGTGGGATTCACTGCCTCGTAATGCTATGGGGAAGGTGAATAAGAAGGAGTTGAAGAAAGTTCTGGCTTCTGATCAACAGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0010033 GO:0010252 GO:0031974 GO:0031981 GO:0034284 GO:0034285 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048878 GO:0050896 GO:0065007 GO:0065008 GO:0070013 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUF

Protein Analysis

659

Amino Acids

71.96

Weight (kDa)

7.0

Isoelectric Point (pI)

38.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	126 - 305	2.3e-35	AMP-binding enzyme
AMP-binding	PF00501	377 - 506	4.1e-28	AMP-binding enzyme
AMP-binding_C	PF13193	558 - 643	1.1e-16	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72320 AT1G72320 AT1G72320 AT1G72320
fragaria_vesca	FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860
malus_domestica	MD09G1172500.v1.1
prunus_persica	Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1
pyrus_communis	pycom09g09000
rosa_chinensis	RchiOBHm_Chr2g0147901
rosa_laevigata	RLG00000020291
rosa_multiflora	Rmu_sc0000308.1_g000059
rosa_roxburghii	Rroxscaffold_2G00099210
rosa_rugosa	Rorug02G0402900
rosa_samantha	Rh2AG459800 Rh2BG473100 Rh2CG447100 Rh2DG482000
rosa_wichuraiana	Rw2G037610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	650
Acc16I	TGCGCA	1 cut(s)	813
Acc36I	ACCTGC	4 cut(s)	39, 650, 805, 1825
AccB7I	CCANNNNNTGG	2 cut(s)	826, 1415
AccI	GTMKAC	4 cut(s)	445, 874, 905, 1169
AccII	CGCG	2 cut(s)	85, 428
AciI	CCGC	6 cut(s)	100, 185, 426, 428, 677, 1205
AclWI	GGATC	4 cut(s)	122, 728, 741, 992
AcsI	RAATTY	2 cut(s)	431, 699
AcuI	CTGAAG	2 cut(s)	579, 1357
AfaI	GTAC	5 cut(s)	556, 763, 1158, 1585, 1624
AfiI	CCNNNNNNNGG	6 cut(s)	502, 826, 1019, 1115, 1376, 1415
AgsI	TTSAA	9 cut(s)	37, 91, 897, 931, 967, 1507, 1567, 1679, 1948
AhlI	ACTAGT	1 cut(s)	755
AjnI	CCWGG	2 cut(s)	110, 1414
Alw21I	GWGCWC	4 cut(s)	8, 373, 513, 1698
Alw26I	GTCTC	1 cut(s)	976
Alw44I	GTGCAC	1 cut(s)	369
AlwI	GGATC	4 cut(s)	122, 728, 741, 992
AoxI	GGCC	1 cut(s)	93
ApaLI	GTGCAC	1 cut(s)	369
ApeKI	GCWGC	5 cut(s)	590, 602, 1217, 1232, 1291
ApoI	RAATTY	2 cut(s)	431, 699
AseI	ATTAAT	1 cut(s)	743
Asp700I	GAANNNNTTC	2 cut(s)	1495, 1683
AspLEI	GCGC	2 cut(s)	814, 1631
AspS9I	GGNCC	1 cut(s)	817
AsuHPI	GGTGA	4 cut(s)	100, 1391, 1487, 1942
AvaII	GGWCC	1 cut(s)	817
AxyI	CCTNAGG	2 cut(s)	501, 1527
BaeGI	GKGCMC	1 cut(s)	373
BaeI	ACNNNNGTAYC	4 cut(s)	1140, 1173, 1452, 1485
BamHI	GGATCC	1 cut(s)	733
BanII	GRGCYC	2 cut(s)	8, 513
BarI	GAAGNNNNNNTAC	2 cut(s)	628, 660
BauI	CACGAG	1 cut(s)	372
BbsI	GAAGAC	2 cut(s)	955, 1313
Bbv12I	GWGCWC	4 cut(s)	8, 373, 513, 1698
BbvI	GCAGC	5 cut(s)	577, 589, 1204, 1219, 1303
BccI	CCATC	9 cut(s)	348, 359, 1039, 1086, 1348, 1459, 1550, 1592, 1708
BceAI	ACGGC	1 cut(s)	1351
BciT130I	CCWGG	2 cut(s)	112, 1416
BciVI	GTATCC	1 cut(s)	1646
BclI	TGATCA	2 cut(s)	856, 1966
BcoDI	GTCTC	1 cut(s)	976
BcuI	ACTAGT	1 cut(s)	755
BfaI	CTAG	4 cut(s)	198, 399, 756, 1536
BfmI	CTRYAG	2 cut(s)	46, 1704
BfuAI	ACCTGC	4 cut(s)	39, 650, 805, 1825
BfuI	GTATCC	1 cut(s)	1646
BisI	GCNGC	5 cut(s)	591, 603, 1218, 1233, 1292
BlpI	GCTNAGC	2 cut(s)	417, 507
BlsI	GCNGC	5 cut(s)	592, 604, 1219, 1234, 1293
BmcAI	AGTACT	1 cut(s)	556
Bme1390I	CCNGG	2 cut(s)	112, 1416
Bme18I	GGWCC	1 cut(s)	817
BmgT120I	GGNCC	1 cut(s)	817
BmiI	GGNNCC	2 cut(s)	735, 1264
BmrFI	CCNGG	2 cut(s)	112, 1416
BmrI	ACTGGG	1 cut(s)	627
BmsI	GCATC	7 cut(s)	394, 679, 813, 1192, 1229, 1324, 1567
BmuI	ACTGGG	1 cut(s)	627
BpiI	GAAGAC	2 cut(s)	955, 1313
BplI	GAGNNNNNCTC	2 cut(s)	1826, 1858
BpmI	CTGGAG	1 cut(s)	1173
Bpu1102I	GCTNAGC	2 cut(s)	417, 507
BsaJI	CCNNGG	3 cut(s)	426, 825, 1197
BsaWI	WCCGGW	1 cut(s)	1732
BsaXI	ACNNNNNCTCC	3 cut(s)	31, 1740, 1770
Bsc4I	CCNNNNNNNGG	6 cut(s)	502, 826, 1019, 1115, 1376, 1415
Bse1I	ACTGG	3 cut(s)	626, 633, 1156
Bse21I	CCTNAGG	2 cut(s)	501, 1527
Bse3DI	GCAATG	1 cut(s)	1301
BseBI	CCWGG	2 cut(s)	112, 1416
BseDI	CCNNGG	3 cut(s)	426, 825, 1197
BseGI	GGATG	2 cut(s)	1207, 1582
BseLI	CCNNNNNNNGG	6 cut(s)	502, 826, 1019, 1115, 1376, 1415
BseMI	GCAATG	1 cut(s)	1301
BseMII	CTCAG	7 cut(s)	230, 482, 492, 498, 620, 993, 1518
BseNI	ACTGG	3 cut(s)	626, 633, 1156
BseRI	GAGGAG	2 cut(s)	52, 1724
BseSI	GKGCMC	1 cut(s)	373
BseXI	GCAGC	5 cut(s)	577, 589, 1204, 1219, 1303
BsgI	GTGCAG	4 cut(s)	264, 678, 1218, 1254
Bsh1236I	CGCG	2 cut(s)	85, 428
BshFI	GGCC	1 cut(s)	95
BsiHKAI	GWGCWC	4 cut(s)	8, 373, 513, 1698
BsiSI	CCGG	1 cut(s)	1733
BslFI	GGGAC	2 cut(s)	466, 1632
BslI	CCNNNNNNNGG	6 cut(s)	502, 826, 1019, 1115, 1376, 1415
BsmAI	GTCTC	1 cut(s)	976
BsmFI	GGGAC	2 cut(s)	466, 1632
BsnI	GGCC	1 cut(s)	95
Bsp1286I	GDGCHC	4 cut(s)	8, 373, 513, 1698
Bsp143I	GATC	8 cut(s)	114, 236, 562, 733, 856, 997, 1431, 1966
Bsp1720I	GCTNAGC	2 cut(s)	417, 507
Bsp19I	CCATGG	1 cut(s)	1197
BspACI	CCGC	6 cut(s)	100, 185, 426, 428, 677, 1205
BspANI	GGCC	1 cut(s)	95
BspCNI	CTCAG	7 cut(s)	229, 483, 493, 499, 619, 994, 1519
BspFNI	CGCG	2 cut(s)	85, 428
BspHI	TCATGA	1 cut(s)	1189
BspLI	GGNNCC	2 cut(s)	735, 1264
BspMAI	CTGCAG	1 cut(s)	50
BspMI	ACCTGC	4 cut(s)	39, 650, 805, 1825
BspPI	GGATC	4 cut(s)	122, 728, 741, 992
BspQI	GCTCTTC	2 cut(s)	62, 1827
BsrDI	GCAATG	1 cut(s)	1301
BsrI	ACTGG	3 cut(s)	626, 633, 1156
BssECI	CCNNGG	3 cut(s)	426, 825, 1197
BssMI	GATC	8 cut(s)	114, 236, 562, 733, 856, 997, 1431, 1966
BssNAI	GTATAC	3 cut(s)	446, 906, 1170
BssSI	CACGAG	1 cut(s)	372
BssT1I	CCWWGG	2 cut(s)	825, 1197
Bst1107I	GTATAC	3 cut(s)	446, 906, 1170
Bst2BI	CACGAG	1 cut(s)	372
Bst2UI	CCWGG	2 cut(s)	112, 1416
Bst4CI	ACNGT	6 cut(s)	257, 924, 1144, 1242, 1399, 1588
Bst6I	CTCTTC	4 cut(s)	62, 70, 160, 1827
BstC8I	GCNNGC	1 cut(s)	1393
BstDSI	CCRYGG	2 cut(s)	426, 1197
BstF5I	GGATG	2 cut(s)	1207, 1582
BstFNI	CGCG	2 cut(s)	85, 428
BstHHI	GCGC	2 cut(s)	814, 1631
BstKTI	GATC	8 cut(s)	117, 239, 565, 736, 859, 1000, 1434, 1969
BstMAI	GTCTC	1 cut(s)	976
BstMBI	GATC	8 cut(s)	114, 236, 562, 733, 856, 997, 1431, 1966
BstMWI	GCNNNNNNNGC	7 cut(s)	599, 1093, 1193, 1202, 1223, 1232, 1491
BstNI	CCWGG	2 cut(s)	112, 1416
BstNSI	RCATGY	2 cut(s)	521, 653
BstSCI	CCNGG	2 cut(s)	110, 1414
BstSFI	CTRYAG	2 cut(s)	46, 1704
BstSLI	GKGCMC	1 cut(s)	373
BstUI	CGCG	2 cut(s)	85, 428
BstV1I	GCAGC	5 cut(s)	577, 589, 1204, 1219, 1303
BstV2I	GAAGAC	2 cut(s)	955, 1313
BstX2I	RGATCY	1 cut(s)	733
BstXI	CCANNNNNNTGG	1 cut(s)	1828
BstYI	RGATCY	1 cut(s)	733
BstZ17I	GTATAC	3 cut(s)	446, 906, 1170
Bsu36I	CCTNAGG	2 cut(s)	501, 1527
BsuI	GTATCC	1 cut(s)	1646
BsuRI	GGCC	1 cut(s)	95
BtgI	CCRYGG	2 cut(s)	426, 1197
BtsCI	GGATG	2 cut(s)	1207, 1582
BtsI	GCAGTG	1 cut(s)	1904
BtsIMutI	CAGTG	3 cut(s)	814, 1593, 1904
BveI	ACCTGC	4 cut(s)	39, 650, 805, 1825
Cac8I	GCNNGC	1 cut(s)	1393
CciI	TCATGA	1 cut(s)	1189
CfoI	GCGC	2 cut(s)	814, 1631
Cfr13I	GGNCC	1 cut(s)	817
Cfr42I	CCGCGG	1 cut(s)	429
CseI	GACGC	1 cut(s)	1235
Csp6I	GTAC	5 cut(s)	555, 762, 1157, 1584, 1623
CviAII	CATG	7 cut(s)	518, 544, 650, 1165, 1190, 1198, 1339
CviQI	GTAC	5 cut(s)	555, 762, 1157, 1584, 1623
DpnI	GATC	8 cut(s)	116, 238, 564, 735, 858, 999, 1433, 1968
DpnII	GATC	8 cut(s)	114, 236, 562, 733, 856, 997, 1431, 1966
DraI	TTTAAA	1 cut(s)	28
Eam1104I	CTCTTC	4 cut(s)	62, 70, 160, 1827
EarI	CTCTTC	4 cut(s)	62, 70, 160, 1827
Ecl136II	GAGCTC	2 cut(s)	6, 511
Eco130I	CCWWGG	2 cut(s)	825, 1197
Eco147I	AGGCCT	1 cut(s)	95
Eco24I	GRGCYC	2 cut(s)	8, 513
Eco47I	GGWCC	1 cut(s)	817
Eco53kI	GAGCTC	2 cut(s)	6, 511
Eco57I	CTGAAG	2 cut(s)	579, 1357
Eco81I	CCTNAGG	2 cut(s)	501, 1527
EcoICRI	GAGCTC	2 cut(s)	6, 511
EcoRI	GAATTC	1 cut(s)	431
EcoRII	CCWGG	2 cut(s)	110, 1414
EcoT14I	CCWWGG	2 cut(s)	825, 1197
EcoT38I	GRGCYC	2 cut(s)	8, 513
ErhI	CCWWGG	2 cut(s)	825, 1197
FaeI	CATG	7 cut(s)	521, 547, 653, 1168, 1193, 1201, 1342
FaqI	GGGAC	2 cut(s)	466, 1632
FatI	CATG	7 cut(s)	517, 543, 649, 1164, 1189, 1197, 1338
FauI	CCCGC	2 cut(s)	107, 670
FbaI	TGATCA	2 cut(s)	856, 1966
FblI	GTMKAC	4 cut(s)	445, 874, 905, 1169
Fnu4HI	GCNGC	5 cut(s)	591, 603, 1218, 1233, 1292
FokI	GGATG	2 cut(s)	1214, 1589
FriOI	GRGCYC	2 cut(s)	8, 513
Fsp4HI	GCNGC	5 cut(s)	591, 603, 1218, 1233, 1292
FspBI	CTAG	4 cut(s)	198, 399, 756, 1536
FspI	TGCGCA	1 cut(s)	813
GlaI	GCGC	2 cut(s)	813, 1630
GluI	GCNGC	5 cut(s)	591, 603, 1218, 1233, 1292
GsuI	CTGGAG	1 cut(s)	1173
HaeIII	GGCC	1 cut(s)	95
HapII	CCGG	1 cut(s)	1733
HgaI	GACGC	1 cut(s)	1235
HhaI	GCGC	2 cut(s)	814, 1631
Hin1II	CATG	7 cut(s)	521, 547, 653, 1168, 1193, 1201, 1342
Hin6I	GCGC	2 cut(s)	812, 1629
HinP1I	GCGC	2 cut(s)	812, 1629
HindIII	AAGCTT	3 cut(s)	30, 834, 1825
HinfI	GANTC	4 cut(s)	530, 1541, 1679, 1901
HpaII	CCGG	1 cut(s)	1733
HphI	GGTGA	4 cut(s)	100, 1391, 1487, 1942
Hpy166II	GTNNAC	8 cut(s)	371, 446, 773, 790, 875, 906, 1170, 1382
Hpy188I	TCNGA	6 cut(s)	241, 492, 535, 1110, 1376, 1966
Hpy188III	TCNNGA	7 cut(s)	210, 218, 1001, 1190, 1325, 1526, 1567
Hpy8I	GTNNAC	8 cut(s)	371, 446, 773, 790, 875, 906, 1170, 1382
HpyAV	CCTTC	6 cut(s)	1381, 1381, 1506, 1636, 1921, 1933
HpyCH4III	ACNGT	6 cut(s)	257, 924, 1144, 1242, 1399, 1588
HpyCH4IV	ACGT	1 cut(s)	1621
HpyF10VI	GCNNNNNNNGC	7 cut(s)	599, 1093, 1193, 1202, 1223, 1232, 1491
HpySE526I	ACGT	1 cut(s)	1621
Hsp92II	CATG	7 cut(s)	521, 547, 653, 1168, 1193, 1201, 1342
HspAI	GCGC	2 cut(s)	812, 1629
Ksp22I	TGATCA	2 cut(s)	856, 1966
KspI	CCGCGG	1 cut(s)	429
Kzo9I	GATC	8 cut(s)	114, 236, 562, 733, 856, 997, 1431, 1966
LguI	GCTCTTC	2 cut(s)	62, 1827
LmnI	GCTCC	3 cut(s)	11, 941, 1207
Lsp1109I	GCAGC	5 cut(s)	577, 589, 1204, 1219, 1303
LweI	GCATC	7 cut(s)	394, 679, 813, 1192, 1229, 1324, 1567
MaeI	CTAG	4 cut(s)	198, 399, 756, 1536
MaeII	ACGT	1 cut(s)	1621
MaeIII	GTNAC	4 cut(s)	135, 251, 257, 1531
MalI	GATC	8 cut(s)	116, 238, 564, 735, 858, 999, 1433, 1968
MboI	GATC	8 cut(s)	114, 236, 562, 733, 856, 997, 1431, 1966
MfeI	CAATTG	1 cut(s)	936
MflI	RGATCY	1 cut(s)	733
MhlI	GDGCHC	4 cut(s)	8, 373, 513, 1698
MluCI	AATT	8 cut(s)	270, 431, 699, 897, 936, 1674, 1683, 1752
MmeI	TCCRAC	1 cut(s)	1381
MroXI	GAANNNNTTC	2 cut(s)	1495, 1683
MseI	TTAA	3 cut(s)	27, 317, 743
MslI	CAYNNNNRTG	3 cut(s)	542, 654, 711
MspA1I	CMGCKG	1 cut(s)	428
MspI	CCGG	1 cut(s)	1733
MspR9I	CCNGG	2 cut(s)	112, 1416
MunI	CAATTG	1 cut(s)	936
MvaI	CCWGG	2 cut(s)	112, 1416
MvnI	CGCG	2 cut(s)	85, 428
MwoI	GCNNNNNNNGC	7 cut(s)	599, 1093, 1193, 1202, 1223, 1232, 1491
NcoI	CCATGG	1 cut(s)	1197
NdeII	GATC	8 cut(s)	114, 236, 562, 733, 856, 997, 1431, 1966
NlaIII	CATG	7 cut(s)	521, 547, 653, 1168, 1193, 1201, 1342
NlaIV	GGNNCC	2 cut(s)	735, 1264
NmuCI	GTSAC	1 cut(s)	135
NsbI	TGCGCA	1 cut(s)	813
NspI	RCATGY	2 cut(s)	521, 653
PagI	TCATGA	1 cut(s)	1189
PaqCI	CACCTGC	1 cut(s)	650
PceI	AGGCCT	1 cut(s)	95
PciSI	GCTCTTC	2 cut(s)	62, 1827
PdmI	GAANNNNTTC	2 cut(s)	1495, 1683
PfeI	GAWTC	4 cut(s)	530, 1541, 1679, 1901
PflMI	CCANNNNNTGG	2 cut(s)	826, 1415
PkrI	GCNGC	5 cut(s)	592, 604, 1219, 1234, 1293
PshBI	ATTAAT	1 cut(s)	743
Psp124BI	GAGCTC	2 cut(s)	8, 513
Psp6I	CCWGG	2 cut(s)	110, 1414
PspGI	CCWGG	2 cut(s)	110, 1414
PspN4I	GGNNCC	2 cut(s)	735, 1264
PspPI	GGNCC	1 cut(s)	817
PstI	CTGCAG	1 cut(s)	50
PsuI	RGATCY	1 cut(s)	733
RsaI	GTAC	5 cut(s)	556, 763, 1158, 1585, 1624
RsaNI	GTAC	5 cut(s)	555, 762, 1157, 1584, 1623
RseI	CAYNNNNRTG	3 cut(s)	542, 654, 711
SacI	GAGCTC	2 cut(s)	8, 513
SacII	CCGCGG	1 cut(s)	429
SapI	GCTCTTC	2 cut(s)	62, 1827
SaqAI	TTAA	3 cut(s)	27, 317, 743
SatI	GCNGC	5 cut(s)	591, 603, 1218, 1233, 1292
Sau3AI	GATC	8 cut(s)	114, 236, 562, 733, 856, 997, 1431, 1966
Sau96I	GGNCC	1 cut(s)	817
ScaI	AGTACT	1 cut(s)	556
ScrFI	CCNGG	2 cut(s)	112, 1416
SduI	GDGCHC	4 cut(s)	8, 373, 513, 1698
SfaNI	GCATC	7 cut(s)	394, 679, 813, 1192, 1229, 1324, 1567
SfcI	CTRYAG	2 cut(s)	46, 1704
Sfr303I	CCGCGG	1 cut(s)	429
SgrBI	CCGCGG	1 cut(s)	429
SinI	GGWCC	1 cut(s)	817
SmiMI	CAYNNNNRTG	3 cut(s)	542, 654, 711
SpeI	ACTAGT	1 cut(s)	755
Sse9I	AATT	8 cut(s)	270, 431, 699, 897, 936, 1674, 1683, 1752
SseBI	AGGCCT	1 cut(s)	95
SsiI	CCGC	6 cut(s)	100, 185, 426, 428, 677, 1205
SspI	AATATT	1 cut(s)	1514
SspMI	CTAG	4 cut(s)	198, 399, 756, 1536
SstI	GAGCTC	2 cut(s)	8, 513
StuI	AGGCCT	1 cut(s)	95
StyD4I	CCNGG	2 cut(s)	110, 1414
StyI	CCWWGG	2 cut(s)	825, 1197
TaaI	ACNGT	6 cut(s)	257, 924, 1144, 1242, 1399, 1588
TaiI	ACGT	1 cut(s)	1624
TaqI	TCGA	1 cut(s)	1174
TasI	AATT	8 cut(s)	270, 431, 699, 897, 936, 1674, 1683, 1752
TatI	WGTACW	1 cut(s)	554
TfiI	GAWTC	4 cut(s)	530, 1541, 1679, 1901
Tru1I	TTAA	3 cut(s)	27, 317, 743
Tru9I	TTAA	3 cut(s)	27, 317, 743
TscAI	CASTG	3 cut(s)	814, 1593, 1911
TseFI	GTSAC	1 cut(s)	135
TseI	GCWGC	5 cut(s)	590, 602, 1217, 1232, 1291
Tsp45I	GTSAC	1 cut(s)	135
TspDTI	ATGAA	7 cut(s)	63, 162, 539, 837, 1206, 1488, 1655
TspGWI	ACGGA	3 cut(s)	298, 881, 1399
TspRI	CASTG	3 cut(s)	814, 1593, 1911
Van91I	CCANNNNNTGG	2 cut(s)	826, 1415
VneI	GTGCAC	1 cut(s)	369
VpaK11BI	GGWCC	1 cut(s)	817
VspI	ATTAAT	1 cut(s)	743
XapI	RAATTY	2 cut(s)	431, 699
XceI	RCATGY	2 cut(s)	521, 653
XmiI	GTMKAC	4 cut(s)	445, 874, 905, 1169
XmnI	GAANNNNTTC	2 cut(s)	1495, 1683
XspI	CTAG	4 cut(s)	198, 399, 756, 1536
ZrmI	AGTACT	1 cut(s)	556

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.