Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003362

Physical Location & Seq

Genomic Coordinates Forward (+)

65518119 .. 65524742

Gene Structure 6624 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ51748

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGGAGGACGACGGGTCGTATAAACGGGGTAGGAAGAAAATGGGTATGTCTAGAAAGCCTGAAAAACAAGGTCAAGGTCAAGGTCGGTCCTTTGATGCTGGTGTTAGTAAAACTGCATCCGGGCGGGGCTCGAATCGGGAGAGCTATTCGGCACCGCAGACTGTTGTGAGGAAACAGGTTGACCCCGAAACCGCAAAGTACTTTTCGGAGATTGCTAACCTTTTCGAGAGTGATGGGATTGATATTGAGGAGCGGTCGTCTTTATGTAGTAATGCACTTGAAGAAACTAGGGGGAAAGAGCTGGAGCTTGCGACGGATTATATTATTAGTCACACTTTGCAGACTCTAGTTGAGGGCTGTGAAGTTGATTGCCTTTGTGCTTTTCTCCGAAGCTGTGCGAAGAACTTCCCTTTGATTGCAATGGATAAGTCTGGATCACATGTAGTTGAGTCTGCCATCAGGGCTTTATCTAAGCATCTTCAGGAGAGTGACGCGTATGCTGTTATTGAGGACACTCTAAATACAATATGCAAGGTAATTGTAAAGAATCCTGTTGATCTGATGTGTGATTGCTACGGATCTCATGTTCTACGAAGTCTTCTCTCTCTTTTTAAAGGAGTGCTGTTGGATTCTTCTGAGTTCCGAATGAGGAAGACATCTTCTGCTCTACCAGAACGGTTTAATTTCAAGGCATCGCGTTCAGACACGGATGTTTCACCACATTTTATACCTGGATTCCCGGATTTACTGAAGTTTCTTGTTTCCGGGATGTTAAAATGTGCTCGAAACAGCATTAAAACCCTGCAAGTTGATCAGTACAGCAGTTTGACTACTCTGAAGTTGTTAGCAGGGGATGAAGAAGAGCTGTTGCAAATAATTCCCATTCTTATTGGATGTACCAGGGAAGATATTGAAGAAGAGAACTCCATTGAACCAACTATTGTGAGAGATGTTTTAGGTTTGATGAAAGAAACAGCATTTAGCCATTTAATGGAGCTTGTTTTGGAAGTAGCTCCTGAAGTCTTGTACAATGGAATCTTCTCAAAGATCTTCAGGAACTCTTTATTTGACCTTTCGTCCCATCATTGTGGGAATTTTGTCATCCAAGCACTTATTTCTCATACAAGGGATCAGGATCAAATAGAGATAATCTGGGAGGAACTTGGTTCGAATTTCAAGGATCTGCTTAAAATGGGAAGATCTGGTGTTATTGCTTCTCTTATCGCTGCAAGTCAAAGGCTTCATAGTTACGAACACAAGTGTTGTCAGGCTCTTGCTGCTGCAGTATATTCAAGCAGTGAGTCTTCAACATGCATTGTTCCCCGTATACTGTTTCTTGATAGCTACTTCAATTGTGAAGATAAGTCTAATTGGAGTTGGCCAAGCGGAGTTAAAATGCACGTCATGGGTTCTTTGATACTACAAGAAGTTTTTCGATTTCAAATTGAATTTATACAGCCTTTTATTACAAGTATTACATCCATCGCAGCTGATAATGTCCTTGAAGCTGCTAAGGATCCAGGGGGTGCTCGTGTTATTGAAGCATTTTTAAGTTCTAATGCTTCTGCAAAACTGAAACGCCGATTAGTTATGAGGCTTCGTGGACATTTTGGAGAGCTAGCATTGCACTCGTCAGGTTCCTTTACTGTTGAAAAGTGCTTTACTACTGGTAACATTTCACAGAGGGAAGCCATAGTATCTGAGTTGGTAGCCGTGCAAAGTGAGCTTTGGAATACAAGGCAAGGTCCTCATCTTATGAGGAAACTAGATGTTGATGGATTTGCTGCCAGACCTGAGCAGTGGAGGTCCAGACAAGAATCAAAGCAATCAACCTTGAGAGACTTTTCTGCTACATTTGGCTCTAGTGAGACCAAACCATCAAACAATAGTGAGACTGAGCAATCAAAGAAGAGCAGCTTTCTTTCTGATGATTATAAGAAAAAATCAAAAGTGGGAAAAACAGTTGACCATCACCAGGCATCTCCTGCACCATTTTTGAGTACAACAGGGTTCAAACGTAAGCCCAAAGAAAAAGAACAGAGCAACAAGAAGTTTGCAAGAGTCTCGGTAGATGAGGATGTTTCTAAAGTGAAGAATAAGTCAAAGAAGAAAAGGCATGGTGACGATGCTTTTTCTAAATCCCCCAAGTTGAAAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0010033 GO:0010252 GO:0031974 GO:0031981 GO:0034284 GO:0034285 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048878 GO:0050896 GO:0065007 GO:0065008 GO:0070013 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUF

Protein Analysis

719

Amino Acids

80.21

Weight (kDa)

8.19

Isoelectric Point (pI)

49.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUF_NOP9	PF22493	98 - 579	1.6e-61	NOP9-like PUF repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72320 AT1G72320 AT1G72320 AT1G72320
fragaria_vesca	FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860 FvH4_6g35860
malus_domestica	MD09G1172500.v1.1
prunus_persica	Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1 Prupe.3G030900_v2.0.a1
pyrus_communis	pycom09g09000
rosa_chinensis	RchiOBHm_Chr2g0147901
rosa_laevigata	RLG00000020291
rosa_multiflora	Rmu_sc0000308.1_g000059
rosa_roxburghii	Rroxscaffold_2G00099210
rosa_rugosa	Rorug02G0402900
rosa_samantha	Rh2AG459800 Rh2BG473100 Rh2CG447100 Rh2DG482000
rosa_wichuraiana	Rw2G037610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1935
AccB1I	GGYRCC	1 cut(s)	151
AccB7I	CCANNNNNTGG	1 cut(s)	991
AccBSI	CCGCTC	1 cut(s)	253
AccI	GTMKAC	1 cut(s)	1327
AccII	CGCG	2 cut(s)	494, 697
AciI	CCGC	5 cut(s)	124, 155, 192, 253, 1386
AclWI	GGATC	7 cut(s)	442, 586, 1137, 1143, 1188, 1511, 1524
AcoI	YGGCCR	1 cut(s)	1379
AcsI	RAATTY	3 cut(s)	1093, 1171, 1448
AcuI	CTGAAG	5 cut(s)	464, 770, 857, 1036, 1038
AfaI	GTAC	5 cut(s)	200, 818, 898, 1028, 2002
AfiI	CCNNNNNNNGG	2 cut(s)	991, 1975
AflIII	ACRYGT	2 cut(s)	439, 492
AhdI	GACNNNNNGTC	2 cut(s)	13, 1075
AjiI	CACGTC	1 cut(s)	1402
AjnI	CCWGG	4 cut(s)	730, 899, 1519, 1974
AloI	GAACNNNNNNTCC	2 cut(s)	570, 602
Alw21I	GWGCWC	2 cut(s)	784, 1531
Alw26I	GTCTC	4 cut(s)	1833, 1862, 1886, 2068
AlwI	GGATC	7 cut(s)	442, 586, 1137, 1143, 1188, 1511, 1524
AoxI	GGCC	1 cut(s)	1379
ApeKI	GCWGC	7 cut(s)	1226, 1277, 1280, 1487, 1508, 1784, 1914
ApoI	RAATTY	3 cut(s)	1093, 1171, 1448
Asp700I	GAANNNNTTC	2 cut(s)	404, 1431
AspS9I	GGNCC	3 cut(s)	87, 1745, 1806
AsuC2I	CCSGG	3 cut(s)	121, 740, 766
AsuHPI	GGTGA	3 cut(s)	708, 1964, 2132
AsuII	TTCGAA	1 cut(s)	1169
AsuNHI	GCTAGC	1 cut(s)	1618
AvaII	GGWCC	3 cut(s)	87, 1745, 1806
BalI	TGGCCA	1 cut(s)	1381
BamHI	GGATCC	1 cut(s)	1516
BanI	GGYRCC	1 cut(s)	151
BanII	GRGCYC	1 cut(s)	131
BauI	CACGAG	1 cut(s)	1530
BbsI	GAAGAC	3 cut(s)	590, 659, 1296
Bbv12I	GWGCWC	2 cut(s)	784, 1531
BbvI	GCAGC	7 cut(s)	1213, 1264, 1267, 1495, 1499, 1771, 1926
BccI	CCATC	7 cut(s)	227, 464, 1089, 1490, 1769, 1885, 1977
BceAI	ACGGC	1 cut(s)	1697
BcgI	CGANNNNNNTGC	4 cut(s)	1611, 1645, 2046, 2080
BciT130I	CCWGG	4 cut(s)	732, 901, 1521, 1976
BclI	TGATCA	1 cut(s)	811
BcnI	CCSGG	3 cut(s)	121, 740, 766
BcoDI	GTCTC	4 cut(s)	1833, 1862, 1886, 2068
BfaI	CTAG	6 cut(s)	51, 288, 347, 1619, 1766, 1863
BfmI	CTRYAG	1 cut(s)	1281
BglI	GCCNNNNNGGC	1 cut(s)	461
BglII	AGATCT	2 cut(s)	1047, 1199
BisI	GCNGC	7 cut(s)	1227, 1278, 1281, 1488, 1509, 1785, 1915
BlsI	GCNGC	7 cut(s)	1228, 1279, 1282, 1489, 1510, 1786, 1916
BmcAI	AGTACT	1 cut(s)	200
Bme1390I	CCNGG	7 cut(s)	121, 732, 740, 766, 901, 1521, 1976
Bme18I	GGWCC	3 cut(s)	87, 1745, 1806
BmeRI	GACNNNNNGTC	2 cut(s)	13, 1075
BmgBI	CACGTC	1 cut(s)	1402
BmgT120I	GGNCC	3 cut(s)	87, 1745, 1806
BmiI	GGNNCC	3 cut(s)	153, 1518, 1639
BmrFI	CCNGG	7 cut(s)	121, 732, 740, 766, 901, 1521, 1976
BmsI	GCATC	6 cut(s)	85, 125, 484, 701, 1988, 2116
BmtI	GCTAGC	1 cut(s)	1622
BpiI	GAAGAC	3 cut(s)	590, 659, 1296
BpmI	CTGGAG	1 cut(s)	323
Bpu10I	CCTNAGC	2 cut(s)	1512, 1794
Bpu14I	TTCGAA	1 cut(s)	1169
BpuEI	CTTGAG	1 cut(s)	1855
BpuMI	CCSGG	3 cut(s)	121, 740, 766
BsaBI	GATNNNNATC	1 cut(s)	1134
BsaI	GGTCTC	1 cut(s)	1862
BsaJI	CCNNGG	2 cut(s)	900, 1520
BsaXI	ACNNNNNCTCC	2 cut(s)	242, 272
Bsc4I	CCNNNNNNNGG	2 cut(s)	991, 1975
Bse1I	ACTGG	1 cut(s)	1672
Bse3DI	GCAATG	2 cut(s)	426, 1622
Bse8I	GATNNNNATC	1 cut(s)	1134
BseBI	CCWGG	4 cut(s)	732, 901, 1521, 1976
BseDI	CCNNGG	2 cut(s)	900, 1520
BseGI	GGATG	8 cut(s)	116, 715, 774, 859, 899, 1101, 1478, 2083
BseJI	GATNNNNATC	1 cut(s)	1134
BseLI	CCNNNNNNNGG	2 cut(s)	991, 1975
BseMI	GCAATG	2 cut(s)	426, 1622
BseMII	CTCAG	4 cut(s)	627, 1692, 1785, 1887
BseNI	ACTGG	1 cut(s)	1672
BseRI	GAGGAG	1 cut(s)	263
BseXI	GCAGC	7 cut(s)	1213, 1264, 1267, 1495, 1499, 1771, 1926
BsgI	GTGCAG	1 cut(s)	1971
Bsh1236I	CGCG	2 cut(s)	494, 697
Bsh1285I	CGRYCG	1 cut(s)	257
BshFI	GGCC	1 cut(s)	1381
BshNI	GGYRCC	1 cut(s)	151
BsiEI	CGRYCG	1 cut(s)	257
BsiHKAI	GWGCWC	2 cut(s)	784, 1531
BsiSI	CCGG	3 cut(s)	120, 740, 765
BslFI	GGGAC	1 cut(s)	1063
BslI	CCNNNNNNNGG	2 cut(s)	991, 1975
BsmAI	GTCTC	4 cut(s)	1833, 1862, 1886, 2068
BsmFI	GGGAC	1 cut(s)	1063
BsnI	GGCC	1 cut(s)	1381
Bso31I	GGTCTC	1 cut(s)	1862
Bsp119I	TTCGAA	1 cut(s)	1169
Bsp1286I	GDGCHC	3 cut(s)	131, 784, 1531
Bsp1407I	TGTACA	1 cut(s)	1026
BspACI	CCGC	5 cut(s)	124, 155, 192, 253, 1386
BspANI	GGCC	1 cut(s)	1381
BspCNI	CTCAG	4 cut(s)	628, 1693, 1786, 1888
BspFNI	CGCG	2 cut(s)	494, 697
BspLI	GGNNCC	3 cut(s)	153, 1518, 1639
BspMAI	CTGCAG	1 cut(s)	1285
BspOI	GCTAGC	1 cut(s)	1622
BspPI	GGATC	7 cut(s)	442, 586, 1137, 1143, 1188, 1511, 1524
BspQI	GCTCTTC	2 cut(s)	855, 1904
BspT104I	TTCGAA	1 cut(s)	1169
BspT107I	GGYRCC	1 cut(s)	151
BspTNI	GGTCTC	1 cut(s)	1862
BsrBI	CCGCTC	1 cut(s)	253
BsrDI	GCAATG	2 cut(s)	426, 1622
BsrGI	TGTACA	1 cut(s)	1026
BsrI	ACTGG	1 cut(s)	1672
BssECI	CCNNGG	2 cut(s)	900, 1520
BssNAI	GTATAC	1 cut(s)	1328
BssSI	CACGAG	1 cut(s)	1530
Bst1107I	GTATAC	1 cut(s)	1328
Bst2BI	CACGAG	1 cut(s)	1530
Bst2UI	CCWGG	4 cut(s)	732, 901, 1521, 1976
Bst4CI	ACNGT	5 cut(s)	163, 678, 1332, 1648, 1963
Bst6I	CTCTTC	3 cut(s)	855, 912, 1904
BstAPI	GCANNNNNTGC	1 cut(s)	1985
BstAUI	TGTACA	1 cut(s)	1026
BstBI	TTCGAA	1 cut(s)	1169
BstC8I	GCNNGC	2 cut(s)	309, 1620
BstDEI	CTNAG	6 cut(s)	471, 636, 1512, 1701, 1794, 1896
BstF5I	GGATG	8 cut(s)	116, 715, 774, 859, 899, 1101, 1478, 2083
BstFNI	CGCG	2 cut(s)	494, 697
BstMAI	GTCTC	4 cut(s)	1833, 1862, 1886, 2068
BstMCI	CGRYCG	1 cut(s)	257
BstMWI	GCNNNNNNNGC	5 cut(s)	461, 1277, 1624, 1723, 1985
BstNI	CCWGG	4 cut(s)	732, 901, 1521, 1976
BstNSI	RCATGY	2 cut(s)	443, 1314
BstSCI	CCNGG	7 cut(s)	119, 730, 738, 764, 899, 1519, 1974
BstSFI	CTRYAG	1 cut(s)	1281
BstUI	CGCG	2 cut(s)	494, 697
BstV1I	GCAGC	7 cut(s)	1213, 1264, 1267, 1495, 1499, 1771, 1926
BstV2I	GAAGAC	3 cut(s)	590, 659, 1296
BstX2I	RGATCY	5 cut(s)	578, 1047, 1180, 1199, 1516
BstXI	CCANNNNNNTGG	1 cut(s)	1088
BstYI	RGATCY	5 cut(s)	578, 1047, 1180, 1199, 1516
BstZ17I	GTATAC	1 cut(s)	1328
BsuRI	GGCC	1 cut(s)	1381
BtgZI	GCGATG	2 cut(s)	678, 1468
BtrI	CACGTC	1 cut(s)	1402
BtsCI	GGATG	8 cut(s)	116, 715, 774, 859, 899, 1101, 1478, 2083
BtsI	GCAGTG	2 cut(s)	1303, 1805
BtsIMutI	CAGTG	2 cut(s)	1303, 1805
Cac8I	GCNNGC	2 cut(s)	309, 1620
Cfr13I	GGNCC	3 cut(s)	87, 1745, 1806
CseI	GACGC	1 cut(s)	500
Csp6I	GTAC	5 cut(s)	199, 817, 897, 1027, 2001
CviAII	CATG	6 cut(s)	440, 584, 1311, 1405, 2117, 2157
CviQI	GTAC	5 cut(s)	199, 817, 897, 1027, 2001
DdeI	CTNAG	6 cut(s)	471, 636, 1512, 1701, 1794, 1896
DraI	TTTAAA	1 cut(s)	613
DriI	GACNNNNNGTC	2 cut(s)	13, 1075
EaeI	YGGCCR	1 cut(s)	1379
Eam1104I	CTCTTC	3 cut(s)	855, 912, 1904
Eam1105I	GACNNNNNGTC	2 cut(s)	13, 1075
EarI	CTCTTC	3 cut(s)	855, 912, 1904
Eco24I	GRGCYC	1 cut(s)	131
Eco31I	GGTCTC	1 cut(s)	1862
Eco47I	GGWCC	3 cut(s)	87, 1745, 1806
Eco57I	CTGAAG	5 cut(s)	464, 770, 857, 1036, 1038
EcoO109I	RGGNCCY	1 cut(s)	1745
EcoRII	CCWGG	4 cut(s)	730, 899, 1519, 1974
EcoT22I	ATGCAT	1 cut(s)	1316
EcoT38I	GRGCYC	1 cut(s)	131
FaeI	CATG	6 cut(s)	443, 587, 1314, 1408, 2120, 2160
FalI	AAGNNNNNCTT	2 cut(s)	1901, 1933
FaqI	GGGAC	1 cut(s)	1063
FatI	CATG	6 cut(s)	439, 583, 1310, 1404, 2116, 2156
FauI	CCCGC	1 cut(s)	117
FbaI	TGATCA	1 cut(s)	811
FblI	GTMKAC	1 cut(s)	1327
Fnu4HI	GCNGC	7 cut(s)	1227, 1278, 1281, 1488, 1509, 1785, 1915
FokI	GGATG	8 cut(s)	103, 722, 781, 866, 906, 1088, 1465, 2090
FriOI	GRGCYC	1 cut(s)	131
Fsp4HI	GCNGC	7 cut(s)	1227, 1278, 1281, 1488, 1509, 1785, 1915
FspBI	CTAG	6 cut(s)	51, 288, 347, 1619, 1766, 1863
GluI	GCNGC	7 cut(s)	1227, 1278, 1281, 1488, 1509, 1785, 1915
GsuI	CTGGAG	1 cut(s)	323
HaeIII	GGCC	1 cut(s)	1381
HapII	CCGG	3 cut(s)	120, 740, 765
HgaI	GACGC	1 cut(s)	500
Hin1II	CATG	6 cut(s)	443, 587, 1314, 1408, 2120, 2160
HincII	GTYRAC	2 cut(s)	181, 1966
HindII	GTYRAC	2 cut(s)	181, 1966
HpaII	CCGG	3 cut(s)	120, 740, 765
HphI	GGTGA	3 cut(s)	708, 1964, 2132
Hpy166II	GTNNAC	4 cut(s)	181, 1328, 1604, 1966
Hpy188I	TCNGA	9 cut(s)	208, 389, 561, 637, 644, 703, 837, 1702, 1927
Hpy8I	GTNNAC	4 cut(s)	181, 1328, 1604, 1966
Hpy99I	CGWCG	2 cut(s)	14, 316
HpyCH4III	ACNGT	5 cut(s)	163, 678, 1332, 1648, 1963
HpyCH4IV	ACGT	2 cut(s)	1401, 2017
HpyF10VI	GCNNNNNNNGC	5 cut(s)	461, 1277, 1624, 1723, 1985
HpyF3I	CTNAG	6 cut(s)	471, 636, 1512, 1701, 1794, 1896
HpySE526I	ACGT	2 cut(s)	1401, 2017
Hsp92II	CATG	6 cut(s)	443, 587, 1314, 1408, 2120, 2160
Ksp22I	TGATCA	1 cut(s)	811
LguI	GCTCTTC	2 cut(s)	855, 1904
LmnI	GCTCC	4 cut(s)	250, 304, 994, 1018
Lsp1109I	GCAGC	7 cut(s)	1213, 1264, 1267, 1495, 1499, 1771, 1926
LweI	GCATC	6 cut(s)	85, 125, 484, 701, 1988, 2116
MaeI	CTAG	6 cut(s)	51, 288, 347, 1619, 1766, 1863
MaeII	ACGT	2 cut(s)	1401, 2017
MaeIII	GTNAC	5 cut(s)	329, 488, 1247, 1670, 2120
MbiI	CCGCTC	1 cut(s)	253
MfeI	CAATTG	1 cut(s)	1351
MflI	RGATCY	5 cut(s)	578, 1047, 1180, 1199, 1516
MhlI	GDGCHC	3 cut(s)	131, 784, 1531
MlsI	TGGCCA	1 cut(s)	1381
MluCI	AATT	9 cut(s)	537, 682, 876, 1093, 1171, 1351, 1369, 1443, 1448
MluI	ACGCGT	1 cut(s)	492
MluNI	TGGCCA	1 cut(s)	1381
MlyI	GAGTC	4 cut(s)	337, 458, 1310, 2070
MmeI	TCCRAC	1 cut(s)	606
Mox20I	TGGCCA	1 cut(s)	1381
Mph1103I	ATGCAT	1 cut(s)	1316
MroXI	GAANNNNTTC	2 cut(s)	404, 1431
MscI	TGGCCA	1 cut(s)	1381
MseI	TTAA	8 cut(s)	612, 681, 773, 795, 989, 1188, 1392, 1550
MslI	CAYNNNNRTG	1 cut(s)	1086
Msp20I	TGGCCA	1 cut(s)	1381
MspA1I	CMGCKG	1 cut(s)	1490
MspI	CCGG	3 cut(s)	120, 740, 765
MspR9I	CCNGG	7 cut(s)	121, 732, 740, 766, 901, 1521, 1976
MunI	CAATTG	1 cut(s)	1351
MvaI	CCWGG	4 cut(s)	732, 901, 1521, 1976
MvnI	CGCG	2 cut(s)	494, 697
MwoI	GCNNNNNNNGC	5 cut(s)	461, 1277, 1624, 1723, 1985
NciI	CCSGG	3 cut(s)	121, 740, 766
NheI	GCTAGC	1 cut(s)	1618
NlaIII	CATG	6 cut(s)	443, 587, 1314, 1408, 2120, 2160
NlaIV	GGNNCC	3 cut(s)	153, 1518, 1639
NmuCI	GTSAC	3 cut(s)	329, 488, 2120
NsiI	ATGCAT	1 cut(s)	1316
NspI	RCATGY	2 cut(s)	443, 1314
NspV	TTCGAA	1 cut(s)	1169
PciI	ACATGT	1 cut(s)	439
PciSI	GCTCTTC	2 cut(s)	855, 1904
PdmI	GAANNNNTTC	2 cut(s)	404, 1431
PfeI	GAWTC	6 cut(s)	133, 547, 629, 735, 1035, 1817
PflMI	CCANNNNNTGG	1 cut(s)	991
PfoI	TCCNGGA	2 cut(s)	738, 764
PkrI	GCNGC	7 cut(s)	1228, 1279, 1282, 1489, 1510, 1786, 1916
PleI	GAGTC	4 cut(s)	337, 457, 1309, 2069
PpsI	GAGTC	4 cut(s)	337, 457, 1309, 2069
PpuMI	RGGWCCY	1 cut(s)	1745
PscI	ACATGT	1 cut(s)	439
PsiI	TTATAA	1 cut(s)	1935
Psp5II	RGGWCCY	1 cut(s)	1745
Psp6I	CCWGG	4 cut(s)	730, 899, 1519, 1974
PspGI	CCWGG	4 cut(s)	730, 899, 1519, 1974
PspN4I	GGNNCC	3 cut(s)	153, 1518, 1639
PspPI	GGNCC	3 cut(s)	87, 1745, 1806
PspPPI	RGGWCCY	1 cut(s)	1745
PstI	CTGCAG	1 cut(s)	1285
PsuI	RGATCY	5 cut(s)	578, 1047, 1180, 1199, 1516
PvuII	CAGCTG	1 cut(s)	1490
RsaI	GTAC	5 cut(s)	200, 818, 898, 1028, 2002
RsaNI	GTAC	5 cut(s)	199, 817, 897, 1027, 2001
RseI	CAYNNNNRTG	1 cut(s)	1086
SapI	GCTCTTC	2 cut(s)	855, 1904
SaqAI	TTAA	8 cut(s)	612, 681, 773, 795, 989, 1188, 1392, 1550
SatI	GCNGC	7 cut(s)	1227, 1278, 1281, 1488, 1509, 1785, 1915
Sau96I	GGNCC	3 cut(s)	87, 1745, 1806
ScaI	AGTACT	1 cut(s)	200
SchI	GAGTC	4 cut(s)	337, 458, 1310, 2070
ScrFI	CCNGG	7 cut(s)	121, 732, 740, 766, 901, 1521, 1976
SduI	GDGCHC	3 cut(s)	131, 784, 1531
SfaNI	GCATC	6 cut(s)	85, 125, 484, 701, 1988, 2116
SfcI	CTRYAG	1 cut(s)	1281
SfuI	TTCGAA	1 cut(s)	1169
SinI	GGWCC	3 cut(s)	87, 1745, 1806
SmiMI	CAYNNNNRTG	1 cut(s)	1086
SmlI	CTYRAG	1 cut(s)	1834
SmoI	CTYRAG	1 cut(s)	1834
Sse9I	AATT	9 cut(s)	537, 682, 876, 1093, 1171, 1351, 1369, 1443, 1448
SsiI	CCGC	5 cut(s)	124, 155, 192, 253, 1386
SspMI	CTAG	6 cut(s)	51, 288, 347, 1619, 1766, 1863
StyD4I	CCNGG	7 cut(s)	119, 730, 738, 764, 899, 1519, 1974
TaaI	ACNGT	5 cut(s)	163, 678, 1332, 1648, 1963
TaiI	ACGT	2 cut(s)	1404, 2020
TaqI	TCGA	5 cut(s)	131, 225, 784, 1169, 1435
TaqII	GACCGA	1 cut(s)	75
TasI	AATT	9 cut(s)	537, 682, 876, 1093, 1171, 1351, 1369, 1443, 1448
TatI	WGTACW	4 cut(s)	198, 816, 1026, 2000
TfiI	GAWTC	6 cut(s)	133, 547, 629, 735, 1035, 1817
Tru1I	TTAA	8 cut(s)	612, 681, 773, 795, 989, 1188, 1392, 1550
Tru9I	TTAA	8 cut(s)	612, 681, 773, 795, 989, 1188, 1392, 1550
TscAI	CASTG	2 cut(s)	1303, 1805
TseFI	GTSAC	3 cut(s)	329, 488, 2120
TseI	GCWGC	7 cut(s)	1226, 1277, 1280, 1487, 1508, 1784, 1914
Tsp45I	GTSAC	3 cut(s)	329, 488, 2120
TspDTI	ATGAA	3 cut(s)	870, 980, 1232
TspGWI	ACGGA	3 cut(s)	329, 591, 722
TspRI	CASTG	2 cut(s)	1303, 1805
Van91I	CCANNNNNTGG	1 cut(s)	991
VpaK11BI	GGWCC	3 cut(s)	87, 1745, 1806
XapI	RAATTY	3 cut(s)	1093, 1171, 1448
XbaI	TCTAGA	1 cut(s)	50
XceI	RCATGY	2 cut(s)	443, 1314
XmiI	GTMKAC	1 cut(s)	1327
XmnI	GAANNNNTTC	2 cut(s)	404, 1431
XspI	CTAG	6 cut(s)	51, 288, 347, 1619, 1766, 1863
ZrmI	AGTACT	1 cut(s)	200
Zsp2I	ATGCAT	1 cut(s)	1316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.