Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0009310

Physical Location & Seq

Genomic Coordinates Forward (+)

15438736 .. 15444109

Gene Structure 5374 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1180000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGGCTACCGCAGCCGGTGCAGCTGCTCTTTTATATTATACATTGAATCGTAAGTTACAGTCCCCTACATCGGACGGTGATGATGACGAAAATGGGGGCGGTGGTGTGCCCAATCATGCTCCTTTGGGAATTGAACGCGTTTCGCATAGGTTAATTCAAGCCCCGGCTACGTGGCTGGAGACCATTTCGACTTTGTCGGAAACTCTAAGGTTTACTTACTCCGAGACTTTGGGGAAGTGGCCTATAGGGGATTTGGCATTTGGGATTAGCTTTCTTCTAAAGAGGCAGGGAAACTTACACGTTCATGGTGTATTTGGTGGAATAGACAGTCAACAGCTAAAAGGATCTCAAATAATTGCTGAACTCAAATACCTCTTAAACTTATTGACACTGTGTTGGCATTTTTCGAAGAAACCTTTTCCATTGTTTTTAGAGGAGACAGGCTATTCAGAAGAGAATGTTCTTCTGCAGGAACCCAAAGCAGGAATCTTGAAGCCTGCTTTTACAATTCTTGTTGATCATAATGAGAAGTGTTTTCTGTTGCTGATTCGTGGAACCCATAGTATTAAGGACACTCTGACGGCTGCAACGGGAGCTATTGTACCATTCCATCACAGTGTTGTACATGAGGGAGGAGTCAGTAATTTAGTTTTGGGTTATGCACATTGTGGAATGGTTGCGGCTGCTCGATGGATTGCAAAGCTTGCAAAACCTTGCCTACTAAAAGCACTTGAAGAATATCCTGACTATGAACTTAAGATTGTAGGGCATTCTTTGGGTGGAGGCACTGCAGCACTTCTAACATATATATTGCGAGAGCAAAAAGAACTTTCAACAACCACCTGTGTGACTTTTGCTCCAGCTGCCTGCATGACGTGGGAATTGGCAGAATCAGGAGGTGGTTTTATTACATCCGTTGTCAATGGAGCTGACTTAGTGCCCACGTTCTCTGCTGCATCAGTGGATGATTTGCGTGCTGAGGTTACGGCGTCTGCTTGGATAAATGACTTGAGAAATCAGATTGAGCAGACAAGAATTCTTAGCACTGTCTATCGTTCTGCTTCAGCTTTGGGATCACGGCTTCCCTCCATTGCCAGTGCAAAAGCAAAAGTTGCTGGGGCAGGGGCAATTCTACGCCCTGTTTCCAATGGTACACAGGTTGTTATGAGAAGAGCCCAGAGCATGGCTCAGGCAGCATGGACTCGTCCTTCCCTTGGCTTGTCATCATGGTCGTGCATGGCTCCTCGTCACCGAGCCTCAGCTGCTCATTCAAACTCAAATGATGAAGGAAGTTCTGGAGGATCCTATGGTGGCAACACAGAGACTTCTGACCCTCTTCTTACATCCCCCAGGAGAATCACAAGCTCAACTGCCATTGAAACCATTGACCTTCCTGTATCTTCATCTGTAGGAATGGAATGGACTTCAGAGATTGATTGTTCTTATTCTGATAGAATGCGTCAAGACGCTGATGGTGATGTCGGTGATGAGCATGAGGGGCTCACAGACCATGATAGACATGAAGACCGGATGACTGAAGTTGAATTGTGGCAACAACTTGAGCATGAGCTTTATGATAGAACAGAAGGCGAGGATGGCGATGTGGTAAATGAAATAAGGAATGCAGAAAATGAAATAAGGGAAGAAGAAGAAGCCGCAATTGCAGAGGCAAGTGATGGTCAGCCAGAGAGCTCTGCTCCTGACATGAAGGAAGCACATAGATTTTTTCCTGCAGGGAAAATCATGCATATTGTTACCGTTCACCATGGTGGTGCTGATAGTGAAAGCGGTGGCCTTAGCTCGAGTGGATCGGGCAATGAGCAGCCAGAAGAGACTAGGGTTGGTATTTTCCTTACTTCAAGATCTCTGTACAGTAAGCTGAGGTTGTCACAAACGATGATTAGTGATCACTTCATGCCGGTATATAGAAGGCAGATTGAGAAGTTAATTAAAGAACTTGAGGAAGAAATGGCTTCCAACGGAGAGGTGGTATTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0001676 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006082 GO:0006629 GO:0006631 GO:0006638 GO:0006639 GO:0006690 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009987 GO:0016020 GO:0016042 GO:0016298 GO:0016787 GO:0016788 GO:0019369 GO:0019752 GO:0032787 GO:0033559 GO:0042133 GO:0042136 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044464 GO:0046339 GO:0046340 GO:0046461 GO:0046464 GO:0046486 GO:0046503 GO:0047372 GO:0052689 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:1901568 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04723 ko04745 ko04925 map04723 map04745 map04925

Pfam Domains

Protein Families

Lipase3_N Lipase_3

Protein Analysis

666

Amino Acids

72.16

Weight (kDa)

5.17

Isoelectric Point (pI)

47.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipase3_N	PF03893	46 - 125	5.3e-18	Lipase 3 N-terminal region
Lipase_3	PF01764	181 - 318	1.9e-29	Lipase (class 3)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14075 AT3G14075 AT3G14075
fragaria_vesca	FvH4_6g35030
malus_domestica	MD09G1180000.v1.1 MD17G1165600.v1.1
prunus_persica	Prupe.3G038800_v2.0.a1 Prupe.3G038800_v2.0.a1
pyrus_communis	pycom09g09770 pycom17g15830
rosa_chinensis	RchiOBHm_Chr2g0146191
rosa_laevigata	RLG00000020185
rosa_multiflora	Rmu_sc0010454.1_g000013
rosa_roxburghii	Rroxscaffold_152G00434890 Rroxscaffold_2G00100260
rosa_rugosa	Rorug02G0393700 Rorug02G0393700
rosa_samantha	Rh2AG449400 Rh2BG461900 Rh2CG436300 Rh2DG471100
rosa_wichuraiana	Rw2G036690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1183
AccII	CGCG	1 cut(s)	138
AciI	CCGC	5 cut(s)	9, 99, 680, 1656, 1788
AclWI	GGATC	5 cut(s)	352, 1081, 1296, 1309, 1816
AcsI	RAATTY	1 cut(s)	1035
AcuI	CTGAAG	3 cut(s)	1047, 1410, 1557
AcyI	GRCGYC	1 cut(s)	989
AdeI	CACNNNGTG	1 cut(s)	668
AfaI	GTAC	4 cut(s)	603, 624, 1153, 1871
AfiI	CCNNNNNNNGG	4 cut(s)	70, 482, 1183, 1214
AflII	CTTAAG	1 cut(s)	755
AflIII	ACRYGT	2 cut(s)	136, 298
AjiI	CACGTC	1 cut(s)	876
AjnI	CCWGG	1 cut(s)	1349
AleI	CACNNNNGTG	2 cut(s)	845, 1767
Alw21I	GWGCWC	1 cut(s)	1694
Alw26I	GTCTC	5 cut(s)	173, 218, 431, 1316, 1826
AlwI	GGATC	5 cut(s)	352, 1081, 1296, 1309, 1816
Ama87I	CYCGRG	1 cut(s)	1801
AoxI	GGCC	2 cut(s)	239, 1792
ApoI	RAATTY	1 cut(s)	1035
AsuC2I	CCSGG	1 cut(s)	164
AsuHPI	GGTGA	5 cut(s)	89, 1241, 1487, 1496, 1754
AsuII	TTCGAA	1 cut(s)	407
AvaI	CYCGRG	1 cut(s)	1801
BaeGI	GKGCMC	2 cut(s)	111, 942
BaeI	ACNNNNGTAYC	2 cut(s)	1143, 1176
BamHI	GGATCC	1 cut(s)	1301
BanII	GRGCYC	3 cut(s)	1177, 1503, 1694
BbsI	GAAGAC	1 cut(s)	1530
Bbv12I	GWGCWC	1 cut(s)	1694
BbvCI	CCTCAGC	3 cut(s)	978, 1258, 1880
BccI	CCATC	5 cut(s)	618, 684, 1466, 1589, 1670
BceAI	ACGGC	3 cut(s)	597, 1002, 1094
BciT130I	CCWGG	1 cut(s)	1351
BclI	TGATCA	2 cut(s)	517, 1906
BcnI	CCSGG	1 cut(s)	164
BcoDI	GTCTC	5 cut(s)	173, 218, 431, 1316, 1826
BfaI	CTAG	1 cut(s)	1836
BfmI	CTRYAG	5 cut(s)	243, 467, 789, 1407, 1731
BfrI	CTTAAG	1 cut(s)	755
BglII	AGATCT	1 cut(s)	1862
Bme1390I	CCNGG	2 cut(s)	164, 1351
BmeT110I	CYCGRG	1 cut(s)	1801
BmgBI	CACGTC	1 cut(s)	876
BmiI	GGNNCC	4 cut(s)	474, 556, 1242, 1303
BmrFI	CCNGG	2 cut(s)	164, 1351
BmsI	GCATC	1 cut(s)	965
BpiI	GAAGAC	1 cut(s)	1530
BplI	GAGNNNNNCTC	4 cut(s)	1171, 1203, 1681, 1713
BpmI	CTGGAG	3 cut(s)	197, 843, 1317
Bpu10I	CCTNAGC	5 cut(s)	978, 1188, 1258, 1796, 1880
Bpu14I	TTCGAA	1 cut(s)	407
BpuEI	CTTGAG	3 cut(s)	1030, 1580, 1979
BpuMI	CCSGG	1 cut(s)	164
BsaAI	YACGTR	1 cut(s)	171
BsaHI	GRCGYC	1 cut(s)	989
BsaI	GGTCTC	1 cut(s)	173
BsaJI	CCNNGG	4 cut(s)	162, 1213, 1349, 1765
BsaWI	WCCGGW	1 cut(s)	1527
BsaXI	ACNNNNNCTCC	5 cut(s)	585, 615, 841, 871, 1974
Bsc4I	CCNNNNNNNGG	4 cut(s)	70, 482, 1183, 1214
Bse118I	RCCGGY	2 cut(s)	14, 1918
Bse1I	ACTGG	1 cut(s)	1095
Bse3DI	GCAATG	2 cut(s)	1089, 1822
BseBI	CCWGG	1 cut(s)	1351
BseDI	CCNNGG	4 cut(s)	162, 1213, 1349, 1765
BseGI	GGATG	5 cut(s)	911, 970, 1343, 1536, 1600
BseLI	CCNNNNNNNGG	4 cut(s)	70, 482, 1183, 1214
BseMI	GCAATG	2 cut(s)	1089, 1822
BseMII	CTCAG	4 cut(s)	969, 1202, 1272, 1871
BseNI	ACTGG	1 cut(s)	1095
BseRI	GAGGAG	3 cut(s)	449, 648, 1233
BseSI	GKGCMC	2 cut(s)	111, 942
BseYI	CCCAGC	1 cut(s)	1115
BsgI	GTGCAG	1 cut(s)	39
Bsh1236I	CGCG	1 cut(s)	138
BshFI	GGCC	2 cut(s)	241, 1794
BsiHKAI	GWGCWC	1 cut(s)	1694
BsiHKCI	CYCGRG	1 cut(s)	1801
BsiSI	CCGG	4 cut(s)	15, 164, 1528, 1919
BslFI	GGGAC	1 cut(s)	46
BslI	CCNNNNNNNGG	4 cut(s)	70, 482, 1183, 1214
BsmAI	GTCTC	5 cut(s)	173, 218, 431, 1316, 1826
BsmFI	GGGAC	1 cut(s)	46
BsmI	GAATGC	3 cut(s)	769, 1461, 1627
BsnI	GGCC	2 cut(s)	241, 1794
Bso31I	GGTCTC	1 cut(s)	173
BsoBI	CYCGRG	1 cut(s)	1801
Bsp119I	TTCGAA	1 cut(s)	407
Bsp1286I	GDGCHC	5 cut(s)	111, 942, 1177, 1503, 1694
Bsp1407I	TGTACA	2 cut(s)	622, 1869
Bsp143I	GATC	7 cut(s)	344, 517, 1073, 1301, 1808, 1862, 1906
Bsp19I	CCATGG	1 cut(s)	1765
BspACI	CCGC	5 cut(s)	9, 99, 680, 1656, 1788
BspANI	GGCC	2 cut(s)	241, 1794
BspCNI	CTCAG	4 cut(s)	970, 1201, 1271, 1872
BspFNI	CGCG	1 cut(s)	138
BspLI	GGNNCC	4 cut(s)	474, 556, 1242, 1303
BspMAI	CTGCAG	3 cut(s)	471, 793, 1735
BspPI	GGATC	5 cut(s)	352, 1081, 1296, 1309, 1816
BspQI	GCTCTTC	1 cut(s)	1165
BspT104I	TTCGAA	1 cut(s)	407
BspTI	CTTAAG	1 cut(s)	755
BspTNI	GGTCTC	1 cut(s)	173
BsrDI	GCAATG	2 cut(s)	1089, 1822
BsrFI	RCCGGY	2 cut(s)	14, 1918
BsrGI	TGTACA	2 cut(s)	622, 1869
BsrI	ACTGG	1 cut(s)	1095
BssAI	RCCGGY	2 cut(s)	14, 1918
BssECI	CCNNGG	4 cut(s)	162, 1213, 1349, 1765
BssMI	GATC	7 cut(s)	344, 517, 1073, 1301, 1808, 1862, 1906
BssNI	GRCGYC	1 cut(s)	989
BssT1I	CCWWGG	2 cut(s)	1213, 1765
Bst2UI	CCWGG	1 cut(s)	1351
Bst4CI	ACNGT	8 cut(s)	60, 77, 329, 393, 617, 1048, 1759, 1874
Bst6I	CTCTTC	4 cut(s)	447, 1165, 1341, 1824
BstACI	GRCGYC	1 cut(s)	989
BstAFI	CTTAAG	1 cut(s)	755
BstAPI	GCANNNNNTGC	3 cut(s)	17, 704, 1112
BstAUI	TGTACA	2 cut(s)	622, 1869
BstBAI	YACGTR	1 cut(s)	171
BstBI	TTCGAA	1 cut(s)	407
BstC8I	GCNNGC	4 cut(s)	498, 705, 868, 975
BstDEI	CTNAG	8 cut(s)	206, 934, 978, 1040, 1188, 1258, 1796, 1880
BstDSI	CCRYGG	1 cut(s)	1765
BstF5I	GGATG	5 cut(s)	911, 970, 1343, 1536, 1600
BstFNI	CGCG	1 cut(s)	138
BstKTI	GATC	7 cut(s)	347, 520, 1076, 1304, 1811, 1865, 1909
BstMAI	GTCTC	5 cut(s)	173, 218, 431, 1316, 1826
BstMBI	GATC	7 cut(s)	344, 517, 1073, 1301, 1808, 1862, 1906
BstNI	CCWGG	1 cut(s)	1351
BstSCI	CCNGG	2 cut(s)	162, 1349
BstSFI	CTRYAG	5 cut(s)	243, 467, 789, 1407, 1731
BstSLI	GKGCMC	2 cut(s)	111, 942
BstUI	CGCG	1 cut(s)	138
BstV2I	GAAGAC	1 cut(s)	1530
BstX2I	RGATCY	3 cut(s)	344, 1301, 1862
BstYI	RGATCY	3 cut(s)	344, 1301, 1862
BsuRI	GGCC	2 cut(s)	241, 1794
BtgI	CCRYGG	1 cut(s)	1765
BtgZI	GCGATG	1 cut(s)	1614
BtrI	CACGTC	1 cut(s)	876
BtsCI	GGATG	5 cut(s)	911, 970, 1343, 1536, 1600
BtsI	GCAGTG	1 cut(s)	786
BtsIMutI	CAGTG	6 cut(s)	389, 622, 786, 966, 1044, 1102
Cac8I	GCNNGC	4 cut(s)	498, 705, 868, 975
Cfr10I	RCCGGY	2 cut(s)	14, 1918
CseI	GACGC	3 cut(s)	978, 1448, 1475
Csp6I	GTAC	4 cut(s)	602, 623, 1152, 1870
CviQI	GTAC	4 cut(s)	602, 623, 1152, 1870
DdeI	CTNAG	8 cut(s)	206, 934, 978, 1040, 1188, 1258, 1796, 1880
DpnI	GATC	7 cut(s)	346, 519, 1075, 1303, 1810, 1864, 1908
DpnII	GATC	7 cut(s)	344, 517, 1073, 1301, 1808, 1862, 1906
DraIII	CACNNNGTG	1 cut(s)	668
Eam1104I	CTCTTC	4 cut(s)	447, 1165, 1341, 1824
EarI	CTCTTC	4 cut(s)	447, 1165, 1341, 1824
Ecl136II	GAGCTC	1 cut(s)	1692
Eco130I	CCWWGG	2 cut(s)	1213, 1765
Eco24I	GRGCYC	3 cut(s)	1177, 1503, 1694
Eco31I	GGTCTC	1 cut(s)	173
Eco53kI	GAGCTC	1 cut(s)	1692
Eco57I	CTGAAG	3 cut(s)	1047, 1410, 1557
Eco88I	CYCGRG	1 cut(s)	1801
EcoICRI	GAGCTC	1 cut(s)	1692
EcoRI	GAATTC	1 cut(s)	1035
EcoRII	CCWGG	1 cut(s)	1349
EcoT14I	CCWWGG	2 cut(s)	1213, 1765
EcoT22I	ATGCAT	1 cut(s)	1749
EcoT38I	GRGCYC	3 cut(s)	1177, 1503, 1694
ErhI	CCWWGG	2 cut(s)	1213, 1765
FalI	AAGNNNNNCTT	2 cut(s)	199, 231
FaqI	GGGAC	1 cut(s)	46
FbaI	TGATCA	2 cut(s)	517, 1906
FokI	GGATG	5 cut(s)	898, 977, 1330, 1543, 1607
FriOI	GRGCYC	3 cut(s)	1177, 1503, 1694
FspBI	CTAG	1 cut(s)	1836
GsaI	CCCAGC	1 cut(s)	1119
GsuI	CTGGAG	3 cut(s)	197, 843, 1317
HaeIII	GGCC	2 cut(s)	241, 1794
HapII	CCGG	4 cut(s)	15, 164, 1528, 1919
HgaI	GACGC	3 cut(s)	978, 1448, 1475
Hin1I	GRCGYC	1 cut(s)	989
HincII	GTYRAC	1 cut(s)	332
HindII	GTYRAC	1 cut(s)	332
HindIII	AAGCTT	1 cut(s)	701
HinfI	GANTC	7 cut(s)	46, 486, 547, 636, 890, 1201, 1356
HpaII	CCGG	4 cut(s)	15, 164, 1528, 1919
HphI	GGTGA	5 cut(s)	89, 1241, 1487, 1496, 1754
Hpy166II	GTNNAC	4 cut(s)	213, 332, 1154, 1762
Hpy188I	TCNGA	9 cut(s)	73, 199, 223, 451, 579, 1020, 1330, 1429, 1450
Hpy188III	TCNNGA	7 cut(s)	490, 743, 894, 1296, 1463, 1700, 1860
Hpy8I	GTNNAC	4 cut(s)	213, 332, 1154, 1762
HpyAV	CCTTC	6 cut(s)	1218, 1280, 1400, 1580, 1702, 1923
HpyCH4III	ACNGT	8 cut(s)	60, 77, 329, 393, 617, 1048, 1759, 1874
HpyCH4IV	ACGT	4 cut(s)	170, 300, 875, 944
HpyF3I	CTNAG	8 cut(s)	206, 934, 978, 1040, 1188, 1258, 1796, 1880
HpySE526I	ACGT	4 cut(s)	170, 300, 875, 944
Hsp92I	GRCGYC	1 cut(s)	989
Ksp22I	TGATCA	2 cut(s)	517, 1906
Kzo9I	GATC	7 cut(s)	344, 517, 1073, 1301, 1808, 1862, 1906
LguI	GCTCTTC	1 cut(s)	1165
LmnI	GCTCC	6 cut(s)	124, 593, 862, 926, 1246, 1702
LweI	GCATC	1 cut(s)	965
MaeI	CTAG	1 cut(s)	1836
MaeII	ACGT	4 cut(s)	170, 300, 875, 944
MaeIII	GTNAC	6 cut(s)	54, 847, 982, 1247, 1753, 1887
MalI	GATC	7 cut(s)	346, 519, 1075, 1303, 1810, 1864, 1908
MboI	GATC	7 cut(s)	344, 517, 1073, 1301, 1808, 1862, 1906
MfeI	CAATTG	1 cut(s)	1659
MflI	RGATCY	3 cut(s)	344, 1301, 1862
MhlI	GDGCHC	5 cut(s)	111, 942, 1177, 1503, 1694
MluI	ACGCGT	1 cut(s)	136
MlyI	GAGTC	2 cut(s)	645, 1195
MmeI	TCCRAC	1 cut(s)	177
Mph1103I	ATGCAT	1 cut(s)	1749
MseI	TTAA	6 cut(s)	152, 377, 567, 756, 1946, 1950
MslI	CAYNNNNRTG	6 cut(s)	303, 615, 845, 1231, 1767, 1770
MspA1I	CMGCKG	3 cut(s)	23, 863, 1262
MspCI	CTTAAG	1 cut(s)	755
MspI	CCGG	4 cut(s)	15, 164, 1528, 1919
MspR9I	CCNGG	2 cut(s)	164, 1351
MunI	CAATTG	1 cut(s)	1659
Mva1269I	GAATGC	3 cut(s)	769, 1461, 1627
MvaI	CCWGG	1 cut(s)	1351
MvnI	CGCG	1 cut(s)	138
NciI	CCSGG	1 cut(s)	164
NcoI	CCATGG	1 cut(s)	1765
NdeII	GATC	7 cut(s)	344, 517, 1073, 1301, 1808, 1862, 1906
NlaIV	GGNNCC	4 cut(s)	474, 556, 1242, 1303
NmuCI	GTSAC	3 cut(s)	847, 1247, 1887
NsiI	ATGCAT	1 cut(s)	1749
NspV	TTCGAA	1 cut(s)	407
OliI	CACNNNNGTG	2 cut(s)	845, 1767
PacI	TTAATTAA	1 cut(s)	1950
PaeR7I	CTCGAG	1 cut(s)	1801
PciSI	GCTCTTC	1 cut(s)	1165
PctI	GAATGC	3 cut(s)	769, 1461, 1627
PfeI	GAWTC	5 cut(s)	46, 486, 547, 890, 1356
PflFI	GACNNNGTC	1 cut(s)	193
PflMI	CCANNNNNTGG	1 cut(s)	1183
PleI	GAGTC	2 cut(s)	644, 1195
PpsI	GAGTC	2 cut(s)	644, 1195
Ppu21I	YACGTR	1 cut(s)	171
Psp124BI	GAGCTC	1 cut(s)	1694
Psp6I	CCWGG	1 cut(s)	1349
PspFI	CCCAGC	1 cut(s)	1115
PspGI	CCWGG	1 cut(s)	1349
PspN4I	GGNNCC	4 cut(s)	474, 556, 1242, 1303
PspXI	VCTCGAGB	1 cut(s)	1801
PstI	CTGCAG	3 cut(s)	471, 793, 1735
PsuI	RGATCY	3 cut(s)	344, 1301, 1862
PsyI	GACNNNGTC	1 cut(s)	193
PvuII	CAGCTG	3 cut(s)	23, 863, 1262
RsaI	GTAC	4 cut(s)	603, 624, 1153, 1871
RsaNI	GTAC	4 cut(s)	602, 623, 1152, 1870
RseI	CAYNNNNRTG	6 cut(s)	303, 615, 845, 1231, 1767, 1770
SacI	GAGCTC	1 cut(s)	1694
SapI	GCTCTTC	1 cut(s)	1165
SaqAI	TTAA	6 cut(s)	152, 377, 567, 756, 1946, 1950
Sau3AI	GATC	7 cut(s)	344, 517, 1073, 1301, 1808, 1862, 1906
SbfI	CCTGCAGG	1 cut(s)	1735
SchI	GAGTC	2 cut(s)	645, 1195
ScrFI	CCNGG	2 cut(s)	164, 1351
SdaI	CCTGCAGG	1 cut(s)	1735
SduI	GDGCHC	5 cut(s)	111, 942, 1177, 1503, 1694
SfaNI	GCATC	1 cut(s)	965
SfcI	CTRYAG	5 cut(s)	243, 467, 789, 1407, 1731
Sfr274I	CTCGAG	1 cut(s)	1801
SfuI	TTCGAA	1 cut(s)	407
SlaI	CTCGAG	1 cut(s)	1801
SmiMI	CAYNNNNRTG	6 cut(s)	303, 615, 845, 1231, 1767, 1770
SmlI	CTYRAG	5 cut(s)	755, 1009, 1559, 1801, 1958
SmoI	CTYRAG	5 cut(s)	755, 1009, 1559, 1801, 1958
Sse8387I	CCTGCAGG	1 cut(s)	1735
SsiI	CCGC	5 cut(s)	9, 99, 680, 1656, 1788
SspMI	CTAG	1 cut(s)	1836
SstI	GAGCTC	1 cut(s)	1694
StyD4I	CCNGG	2 cut(s)	162, 1349
StyI	CCWWGG	2 cut(s)	1213, 1765
TaaI	ACNGT	8 cut(s)	60, 77, 329, 393, 617, 1048, 1759, 1874
TaiI	ACGT	4 cut(s)	173, 303, 878, 947
TaqI	TCGA	4 cut(s)	188, 407, 688, 1802
TatI	WGTACW	2 cut(s)	622, 1869
TauI	GCSGC	2 cut(s)	683, 1658
TfiI	GAWTC	5 cut(s)	46, 486, 547, 890, 1356
Tru1I	TTAA	6 cut(s)	152, 377, 567, 756, 1946, 1950
Tru9I	TTAA	6 cut(s)	152, 377, 567, 756, 1946, 1950
TscAI	CASTG	6 cut(s)	396, 622, 793, 966, 1051, 1102
TseFI	GTSAC	3 cut(s)	847, 1247, 1887
Tsp45I	GTSAC	3 cut(s)	847, 1247, 1887
TspDTI	ATGAA	9 cut(s)	293, 765, 1299, 1392, 1536, 1626, 1647, 1721, 1903
TspGWI	ACGGA	2 cut(s)	904, 1995
TspRI	CASTG	6 cut(s)	396, 622, 793, 966, 1051, 1102
Tth111I	GACNNNGTC	1 cut(s)	193
Van91I	CCANNNNNTGG	1 cut(s)	1183
Vha464I	CTTAAG	1 cut(s)	755
XapI	RAATTY	1 cut(s)	1035
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1984
XhoI	CTCGAG	1 cut(s)	1801
XspI	CTAG	1 cut(s)	1836
Zsp2I	ATGCAT	1 cut(s)	1749

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.