Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0009310

Physical Location & Seq

Genomic Coordinates Reverse (-)

62182861 .. 62192691

Gene Structure 9831 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020185

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2808 bp

ATGAGTCGTGGTAGTGGTGGAGGATACGACCGTCATATCACGATCTTCTCACCCGAAGGTCGTCTTTTCCAAGTCGAATATGCGTTTAAGGCTGTGAAGTCTGCTGGGATTACCTCCATTGGTGTCCGAGGGAAGGATTCAGTATGTGTTGTGACTCAGAAGAAAGTTCCGGACAAGCTTTTGGATCAGACAAGTGTCACCCATCTTTTTCCCATTACAAAGTTCCTAGGGTTGCTGGCTACTGGCATGACAGCTGATGCAAGGACTCTGGTATCACAAGCAAGGAATGAAGCAGCTGACTTCCGATTCAAAAATGGATATGAGATGCCTGTAGATGTATTGGCCAACTGGATTGCAAACAAATCACAAGTCTATACTCAACATGCTTATATGAGACCACTGGGAGTAGTTGCTATGGTGTTGGGTGTTGATGAAGAGACCGGACCTCAACTCTATAAGTGTGACCCAGCTGGTCACTACTTTGGTCATAAGGCCACAAGTGCTGGATTGAAAGAACAAGAGGCAATTAATTTCTTAGAGAAGAAAATGAAGAATGACCCTTCCTTTACTTACGAGGAGACCGTGCAGACTGCCATTTCTGCGCTGCAATCAGTTCTGCAAGAGGATTTTAAGGCCACGGAGATTGAGGTTGGAGTGGTGAGAAAGGAGAATCCTGTTTTTAGAGTGTTGCCCACTGAAGAGATTGATGAGCACTTGACTGCCATAAAGACGAAGCCATTAATCCTCCCTCTCTCCGCCAAAATCGATCTCTTCAGGGATAGTAAGTTAATGGCAACTGCAACTATGGCCACCGCAGCCGGTGCAGCTGCTCTCTTGTATTACACATTGAACCGCAAGTTACAGACCGGCGGTGATGATGACGAAAGAGGTGGTGACTTGCCCGATCAGGCGCCTTTGGGAATCGACCGGGTTTCCAATAGGTTAATTCAGGCCCCTGCTACCTGGTTGGAAACTATTTCCACCTTGTCTGAGACTCTTAGGTTTACTTACTCTGAGACTCTCGGCAAGTGGCCTATCGGGGACTTGGCTTTCGGAATCAGCTTCCTTCTCAAGAGGCAGGGAAACTTACTTGTTGATGGTGTATTTGGTGGAGAAGAAAGTCAACAGCTGAAGGGGCCTGAAATAGTAGAGGAACTTAAGTACCTCTTAAACTTATTAACACTGTGTTGGCACTTTTCCAAGAAACCTTTTCCTTTATTTTTAGAGGAGACAGGTTATTCTGAAGAGAATGTTCTTCTTCAGGAACCCAAAGCAGGAATTTTGAAGCCTGCGTTTACAATTCTGGTTGATCATAACCAAAAATGCTTTCTCTTGTTGATTCGTGGAACCCATAGTATCAAGGACACTTTAACAGCGGCAACAGGGGCTGTTGTACCTTTCCATCACAGTGTTGTGCATGAGGGAGGGGTCAGTGATCTAGTTTTGGGTTATGCACATTGTGGAATGGTTGCGGCTGCAAGGTGGATTGCAAAGCTTGCAAAACCGCGTCTTCTAGAAGCGCTTGACCAATATCCTGGCTATGAACTTAAGATTGTAGGGCATTCTTTGGGTGGAGGCACTGCAGCTCTTTTAACATATATATTGCGTGAGCAGAAAGAACTTGCAACAACCACTTGTGTGACGTTTGCTCCAGCTGCCTGTATGACATGGGAATTGGCAGAATCAGGCGCTACGTTTATTACTTCCGTTGTTAATGGTGCTGACTTAGTGCCCACCTTCTCTGCTGCATCAGTGGATGATTTACGTGCTGAGGTAACTGCATCTGCTTGGCTAAATGATCTGAGAAATCAGATAGAGCAGACAAGAATCCTTAGCACTGTGTATCGTTCTGCTTCAGCCTTGAGTTCACGCCTTCCATCCATTGCCACTGCTAAAGCAACGGTTGCAGGGGCAGGGGCGATTCTGCGCCCTGTTTCCAGTGGTACACAGGTTGTTATGAGAAGAGCTCAGAGCATGGCAGCATGGGCACGTCCTAACCTTCGCTTATCATCATGGAACTGCATGGCTCCTCGTCACAGAACCTCAGCTGTCTGTTCAAATTCAAATGATGAGGCAAGTTCTGCAGAGTCCTCATGTGGCCACACTGAGACTTCTGAGCCTCTCCTTACGTCTCCTAAGACAAGGATGAGCTCAAGTGTCATTGAAAGCCTTAACCTTCCTGTATCTACATCTGGAAGAATGGAGTGGACTTCGGAGATTGGATGCTCTATTTCTGATAGTGGGATGCGTCCAGATACTGATGAGGATGTCAGTAATGAAGGTGACCATGATAGACATGAAGATCGCATGACTGAAGCTGAATTGTGGCAACAACTTGAGCATGAACTTTCTGATAGAACAGAAGGTGAGGAGGCAGATGTAGCAAAAGAAATAAGGGAAGAAGAAGAAGCGGCAAGAAGGGAAGAAGTAAACGAAGCGTCAATAAGGGAAGAAGAAGAGGCGGCAATTGCAGAGGTAAGCAATGGCCAGCCAGAGAGCTCTTCTCCAGGAATGAAGGAAGCGCACAGATTTTTTCCTGCAGGCAAAATCATGCATATCGTTACCCTTCATAGTGGTGCTACTAATTGTGAAAGTGGCAGCCCTAGCTCCAGTGGCTCGGATGAGCAGCGGCAGCCAGAAGAGACTAGGATTGGTATTTTCCTCACTCCAAGATCTCTGTACAGTAAGCTGAGGTTGTCGCAAACAATGATCAGTGATCACTTCATGCCAGTCTATAGAAGACGGATTGAGAAGCTGATAAAAGAATTTGAGAAAGAAGCAGCTTCCATTGGAGAGGTAGTATTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0001676 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006082 GO:0006629 GO:0006631 GO:0006638 GO:0006639 GO:0006690 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009987 GO:0016020 GO:0016042 GO:0016298 GO:0016787 GO:0016788 GO:0019369 GO:0019752 GO:0032787 GO:0033559 GO:0042133 GO:0042136 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044464 GO:0046339 GO:0046340 GO:0046461 GO:0046464 GO:0046486 GO:0046503 GO:0047372 GO:0052689 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:1901568 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04723 ko04745 ko04925 map04723 map04745 map04925

Pfam Domains

Protein Families

Lipase3_N Lipase_3

Protein Analysis

936

Amino Acids

102.44

Weight (kDa)

5.41

Isoelectric Point (pI)

46.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Proteasome_A_N	PF10584	9 - 31	1.9e-14	Proteasome subunit A N-terminal signature
Proteasome	PF00227	35 - 220	1.9e-50	Proteasome subunit
Lipase3_N	PF03893	310 - 389	1.9e-18	Lipase 3 N-terminal region
Lipase_3	PF01764	445 - 582	1.3e-28	Lipase (class 3)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14075 AT3G14075 AT3G14075
fragaria_vesca	FvH4_6g35030
malus_domestica	MD09G1180000.v1.1 MD17G1165600.v1.1
prunus_persica	Prupe.3G038800_v2.0.a1 Prupe.3G038800_v2.0.a1
pyrus_communis	pycom09g09770 pycom17g15830
rosa_chinensis	RchiOBHm_Chr2g0146191
rosa_laevigata	RLG00000020185
rosa_multiflora	Rmu_sc0010454.1_g000013
rosa_roxburghii	Rroxscaffold_152G00434890 Rroxscaffold_2G00100260
rosa_rugosa	Rorug02G0393700 Rorug02G0393700
rosa_samantha	Rh2AG449400 Rh2BG461900 Rh2CG436300 Rh2DG471100
rosa_wichuraiana	Rw2G036690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	910
AccII	CGCG	1 cut(s)	1507
AccIII	TCCGGA	1 cut(s)	169
AclWI	GGATC	1 cut(s)	192
AcoI	YGGCCR	4 cut(s)	342, 807, 2098, 2485
AcsI	RAATTY	3 cut(s)	1278, 2059, 2765
AcuI	CTGAAG	7 cut(s)	717, 757, 1151, 1244, 1263, 1839, 2334
AcyI	GRCGYC	1 cut(s)	911
AdeI	CACNNNGTG	1 cut(s)	1460
AfaI	GTAC	4 cut(s)	1163, 1395, 1945, 2681
AfeI	AGCGCT	1 cut(s)	1521
AfiI	CCNNNNNNNGG	2 cut(s)	133, 1274
AflII	CTTAAG	2 cut(s)	1157, 1547
AgsI	TTSAA	7 cut(s)	310, 511, 850, 1285, 2058, 2064, 2165
AjiI	CACGTC	1 cut(s)	1991
AjnI	CCWGG	3 cut(s)	962, 1534, 2506
AjuI	GAANNNNNNNTTGG	2 cut(s)	1311, 1343
AleI	CACNNNNGTG	1 cut(s)	1637
Alw21I	GWGCWC	4 cut(s)	714, 1969, 2153, 2501
Alw26I	GTCTC	9 cut(s)	388, 431, 572, 986, 1010, 1223, 2102, 2136, 2636
AlwI	GGATC	1 cut(s)	192
AlwNI	CAGNNNCTG	2 cut(s)	1388, 2258
Aor13HI	TCCGGA	1 cut(s)	169
Aor51HI	AGCGCT	1 cut(s)	1521
AoxI	GGCC	9 cut(s)	342, 492, 633, 807, 951, 1031, 1136, 2098, 2485
ApoI	RAATTY	3 cut(s)	1278, 2059, 2765
ArsI	GACNNNNNNTTYG	4 cut(s)	354, 386, 1034, 1066
AseI	ATTAAT	2 cut(s)	528, 740
AspA2I	CCTAGG	1 cut(s)	226
AspLEI	GCGC	6 cut(s)	604, 913, 1522, 1691, 1929, 2524
AspS9I	GGNCC	3 cut(s)	443, 952, 1136
AsuC2I	CCSGG	1 cut(s)	929
AsuHPI	GGTGA	7 cut(s)	42, 190, 670, 884, 905, 2294, 2378
AvaII	GGWCC	1 cut(s)	443
AvrII	CCTAGG	1 cut(s)	226
BaeGI	GKGCMC	2 cut(s)	1734, 1990
BaeI	ACNNNNGTAYC	8 cut(s)	16, 49, 255, 288, 1145, 1178, 1935, 1968
BalI	TGGCCA	4 cut(s)	344, 809, 2100, 2487
BanI	GGYRCC	1 cut(s)	910
BanII	GRGCYC	3 cut(s)	1969, 2153, 2501
BbsI	GAAGAC	2 cut(s)	1502, 2746
Bbv12I	GWGCWC	4 cut(s)	714, 1969, 2153, 2501
BbvCI	CCTCAGC	3 cut(s)	1770, 2044, 2690
BccI	CCATC	4 cut(s)	210, 1091, 1410, 1885
BciT130I	CCWGG	3 cut(s)	964, 1536, 2508
BciVI	GTATCC	1 cut(s)	17
BclI	TGATCA	3 cut(s)	1309, 2709, 2716
BcnI	CCSGG	1 cut(s)	929
BcoDI	GTCTC	9 cut(s)	388, 431, 572, 986, 1010, 1223, 2102, 2136, 2636
BfaI	CTAG	5 cut(s)	227, 1439, 1514, 2604, 2646
BfmI	CTRYAG	5 cut(s)	330, 1581, 2082, 2538, 2734
BfoI	RGCGCY	3 cut(s)	914, 1523, 1692
BfrI	CTTAAG	2 cut(s)	1157, 1547
BfuI	GTATCC	1 cut(s)	17
BglII	AGATCT	1 cut(s)	2672
BlnI	CCTAGG	1 cut(s)	226
Bme1390I	CCNGG	4 cut(s)	929, 964, 1536, 2508
Bme18I	GGWCC	1 cut(s)	443
BmgBI	CACGTC	1 cut(s)	1991
BmgT120I	GGNCC	3 cut(s)	443, 952, 1136
BmiI	GGNNCC	6 cut(s)	912, 954, 1137, 1266, 1348, 2028
BmrFI	CCNGG	4 cut(s)	929, 964, 1536, 2508
BmrI	ACTGGG	1 cut(s)	410
BmsI	GCATC	6 cut(s)	247, 315, 1757, 1790, 2213, 2235
BmuI	ACTGGG	1 cut(s)	410
BoxI	GACNNNNGTC	1 cut(s)	194
BpiI	GAAGAC	2 cut(s)	1502, 2746
BplI	GAGNNNNNCTC	4 cut(s)	1951, 1983, 2488, 2520
BpmI	CTGGAG	3 cut(s)	1635, 2490, 2593
Bpu10I	CCTNAGC	4 cut(s)	1770, 1832, 2044, 2690
BpuEI	CTTGAG	4 cut(s)	1055, 1882, 2137, 2357
BpuMI	CCSGG	1 cut(s)	929
Bsa29I	ATCGAT	1 cut(s)	765
BsaAI	YACGTR	1 cut(s)	1766
BsaHI	GRCGYC	1 cut(s)	911
BsaI	GGTCTC	3 cut(s)	388, 431, 572
BsaJI	CCNNGG	3 cut(s)	127, 226, 636
BsaWI	WCCGGW	2 cut(s)	169, 440
BsaXI	ACNNNNNCTCC	3 cut(s)	1633, 1663, 2784
Bsc4I	CCNNNNNNNGG	2 cut(s)	133, 1274
Bse118I	RCCGGY	2 cut(s)	818, 866
Bse1I	ACTGG	6 cut(s)	247, 353, 405, 1938, 2610, 2729
Bse3DI	GCAATG	2 cut(s)	1881, 2488
BseAI	TCCGGA	1 cut(s)	169
BseBI	CCWGG	3 cut(s)	964, 1536, 2508
BseCI	ATCGAT	1 cut(s)	765
BseDI	CCNNGG	3 cut(s)	127, 226, 636
BseGI	GGATG	7 cut(s)	1762, 1877, 2151, 2228, 2250, 2272, 2626
BseLI	CCNNNNNNNGG	2 cut(s)	133, 1274
BseMI	GCAATG	2 cut(s)	1881, 2488
BseNI	ACTGG	6 cut(s)	247, 353, 405, 1938, 2610, 2729
BseRI	GAGGAG	4 cut(s)	590, 1241, 2019, 2384
BseSI	GKGCMC	2 cut(s)	1734, 1990
BseYI	CCCAGC	2 cut(s)	104, 466
BsgI	GTGCAG	2 cut(s)	605, 843
Bsh1236I	CGCG	1 cut(s)	1507
Bsh1285I	CGRYCG	2 cut(s)	31, 928
BshFI	GGCC	9 cut(s)	344, 494, 635, 809, 953, 1033, 1138, 2100, 2487
BshNI	GGYRCC	1 cut(s)	910
BshVI	ATCGAT	1 cut(s)	765
BsiEI	CGRYCG	2 cut(s)	31, 928
BsiHKAI	GWGCWC	4 cut(s)	714, 1969, 2153, 2501
BsiSI	CCGG	5 cut(s)	170, 441, 819, 867, 928
BslFI	GGGAC	1 cut(s)	1055
BslI	CCNNNNNNNGG	2 cut(s)	133, 1274
BsmAI	GTCTC	9 cut(s)	388, 431, 572, 986, 1010, 1223, 2102, 2136, 2636
BsmBI	CGTCTC	1 cut(s)	2136
BsmFI	GGGAC	1 cut(s)	1055
BsmI	GAATGC	1 cut(s)	1561
BsnI	GGCC	9 cut(s)	344, 494, 635, 809, 953, 1033, 1138, 2100, 2487
Bso31I	GGTCTC	3 cut(s)	388, 431, 572
Bsp1286I	GDGCHC	6 cut(s)	714, 1734, 1969, 1990, 2153, 2501
Bsp13I	TCCGGA	1 cut(s)	169
Bsp1407I	TGTACA	1 cut(s)	2679
BspANI	GGCC	9 cut(s)	344, 494, 635, 809, 953, 1033, 1138, 2100, 2487
BspDI	ATCGAT	1 cut(s)	765
BspEI	TCCGGA	1 cut(s)	169
BspFNI	CGCG	1 cut(s)	1507
BspLI	GGNNCC	6 cut(s)	912, 954, 1137, 1266, 1348, 2028
BspMAI	CTGCAG	3 cut(s)	1585, 2086, 2542
BspPI	GGATC	1 cut(s)	192
BspQI	GCTCTTC	2 cut(s)	1957, 2506
BspT107I	GGYRCC	1 cut(s)	910
BspTI	CTTAAG	2 cut(s)	1157, 1547
BspTNI	GGTCTC	3 cut(s)	388, 431, 572
BsrDI	GCAATG	2 cut(s)	1881, 2488
BsrFI	RCCGGY	2 cut(s)	818, 866
BsrGI	TGTACA	1 cut(s)	2679
BsrI	ACTGG	6 cut(s)	247, 353, 405, 1938, 2610, 2729
BssAI	RCCGGY	2 cut(s)	818, 866
BssECI	CCNNGG	3 cut(s)	127, 226, 636
BssNI	GRCGYC	1 cut(s)	911
BssT1I	CCWWGG	1 cut(s)	226
Bst2UI	CCWGG	3 cut(s)	964, 1536, 2508
Bst4CI	ACNGT	7 cut(s)	32, 583, 1185, 1409, 1840, 1903, 2684
Bst6I	CTCTTC	8 cut(s)	429, 693, 776, 1239, 1957, 2451, 2506, 2634
BstACI	GRCGYC	1 cut(s)	911
BstAFI	CTTAAG	2 cut(s)	1157, 1547
BstAPI	GCANNNNNTGC	4 cut(s)	821, 1496, 1904, 2081
BstAUI	TGTACA	1 cut(s)	2679
BstBAI	YACGTR	1 cut(s)	1766
BstC8I	GCNNGC	5 cut(s)	237, 1290, 1497, 2489, 2542
BstDSI	CCRYGG	1 cut(s)	636
BstEII	GGTNACC	1 cut(s)	2282
BstF5I	GGATG	7 cut(s)	1762, 1877, 2151, 2228, 2250, 2272, 2626
BstFNI	CGCG	1 cut(s)	1507
BstH2I	RGCGCY	3 cut(s)	914, 1523, 1692
BstHHI	GCGC	6 cut(s)	604, 913, 1522, 1691, 1929, 2524
BstMAI	GTCTC	9 cut(s)	388, 431, 572, 986, 1010, 1223, 2102, 2136, 2636
BstMCI	CGRYCG	2 cut(s)	31, 928
BstNI	CCWGG	3 cut(s)	964, 1536, 2508
BstNSI	RCATGY	1 cut(s)	386
BstPAI	GACNNNNGTC	1 cut(s)	194
BstPI	GGTNACC	1 cut(s)	2282
BstSCI	CCNGG	4 cut(s)	927, 962, 1534, 2506
BstSFI	CTRYAG	5 cut(s)	330, 1581, 2082, 2538, 2734
BstSLI	GKGCMC	2 cut(s)	1734, 1990
BstUI	CGCG	1 cut(s)	1507
BstV2I	GAAGAC	2 cut(s)	1502, 2746
BstX2I	RGATCY	1 cut(s)	2672
BstXI	CCANNNNNNTGG	1 cut(s)	1535
BstYI	RGATCY	1 cut(s)	2672
Bsu15I	ATCGAT	1 cut(s)	765
BsuI	GTATCC	1 cut(s)	17
BsuRI	GGCC	9 cut(s)	344, 494, 635, 809, 953, 1033, 1138, 2100, 2487
BsuTUI	ATCGAT	1 cut(s)	765
BtgI	CCRYGG	1 cut(s)	636
BtrI	CACGTC	1 cut(s)	1991
BtsCI	GGATG	7 cut(s)	1762, 1877, 2151, 2228, 2250, 2272, 2626
BtsI	GCAGTG	2 cut(s)	1578, 1887
Cac8I	GCNNGC	5 cut(s)	237, 1290, 1497, 2489, 2542
CaiI	CAGNNNCTG	2 cut(s)	1388, 2258
CfoI	GCGC	6 cut(s)	604, 913, 1522, 1691, 1929, 2524
Cfr10I	RCCGGY	2 cut(s)	818, 866
Cfr13I	GGNCC	3 cut(s)	443, 952, 1136
ClaI	ATCGAT	1 cut(s)	765
CseI	GACGC	3 cut(s)	1496, 2237, 2427
CsiI	ACCWGGT	1 cut(s)	962
Csp6I	GTAC	4 cut(s)	1162, 1394, 1944, 2680
CspCI	CAANNNNNGTGG	2 cut(s)	625, 660
CviQI	GTAC	4 cut(s)	1162, 1394, 1944, 2680
DinI	GGCGCC	1 cut(s)	912
DraIII	CACNNNGTG	1 cut(s)	1460
EaeI	YGGCCR	4 cut(s)	342, 807, 2098, 2485
Eam1104I	CTCTTC	8 cut(s)	429, 693, 776, 1239, 1957, 2451, 2506, 2634
EarI	CTCTTC	8 cut(s)	429, 693, 776, 1239, 1957, 2451, 2506, 2634
EciI	GGCGGA	1 cut(s)	745
Ecl136II	GAGCTC	3 cut(s)	1967, 2151, 2499
Eco130I	CCWWGG	1 cut(s)	226
Eco24I	GRGCYC	3 cut(s)	1969, 2153, 2501
Eco31I	GGTCTC	3 cut(s)	388, 431, 572
Eco47I	GGWCC	1 cut(s)	443
Eco47III	AGCGCT	1 cut(s)	1521
Eco53kI	GAGCTC	3 cut(s)	1967, 2151, 2499
Eco57I	CTGAAG	7 cut(s)	717, 757, 1151, 1244, 1263, 1839, 2334
Eco91I	GGTNACC	1 cut(s)	2282
EcoICRI	GAGCTC	3 cut(s)	1967, 2151, 2499
EcoO109I	RGGNCCY	2 cut(s)	952, 1136
EcoO65I	GGTNACC	1 cut(s)	2282
EcoRII	CCWGG	3 cut(s)	962, 1534, 2506
EcoT14I	CCWWGG	1 cut(s)	226
EcoT22I	ATGCAT	1 cut(s)	2556
EcoT38I	GRGCYC	3 cut(s)	1969, 2153, 2501
EgeI	GGCGCC	1 cut(s)	912
EheI	GGCGCC	1 cut(s)	912
ErhI	CCWWGG	1 cut(s)	226
Esp3I	CGTCTC	1 cut(s)	2136
FalI	AAGNNNNNCTT	4 cut(s)	48, 80, 1151, 1183
FaqI	GGGAC	1 cut(s)	1055
FbaI	TGATCA	3 cut(s)	1309, 2709, 2716
FokI	GGATG	7 cut(s)	1769, 1864, 2158, 2235, 2257, 2279, 2633
FriOI	GRGCYC	3 cut(s)	1969, 2153, 2501
FspBI	CTAG	5 cut(s)	227, 1439, 1514, 2604, 2646
GlaI	GCGC	6 cut(s)	603, 912, 1521, 1690, 1928, 2523
GsaI	CCCAGC	2 cut(s)	108, 470
GsuI	CTGGAG	3 cut(s)	1635, 2490, 2593
HaeII	RGCGCY	3 cut(s)	914, 1523, 1692
HaeIII	GGCC	9 cut(s)	344, 494, 635, 809, 953, 1033, 1138, 2100, 2487
HapII	CCGG	5 cut(s)	170, 441, 819, 867, 928
HgaI	GACGC	3 cut(s)	1496, 2237, 2427
HhaI	GCGC	6 cut(s)	604, 913, 1522, 1691, 1929, 2524
Hin1I	GRCGYC	1 cut(s)	911
Hin6I	GCGC	6 cut(s)	602, 911, 1520, 1689, 1927, 2522
HinP1I	GCGC	6 cut(s)	602, 911, 1520, 1689, 1927, 2522
HincII	GTYRAC	1 cut(s)	1124
HindII	GTYRAC	1 cut(s)	1124
HindIII	AAGCTT	2 cut(s)	176, 1493
HpaII	CCGG	5 cut(s)	170, 441, 819, 867, 928
HphI	GGTGA	7 cut(s)	42, 190, 670, 884, 905, 2294, 2378
Hpy166II	GTNNAC	7 cut(s)	1005, 1124, 1296, 1868, 1946, 2208, 2431
Hpy188III	TCNNGA	7 cut(s)	40, 170, 1072, 1262, 1514, 2193, 2252
Hpy8I	GTNNAC	7 cut(s)	1005, 1124, 1296, 1868, 1946, 2208, 2431
HpyCH4III	ACNGT	7 cut(s)	32, 583, 1185, 1409, 1840, 1903, 2684
HpyCH4IV	ACGT	5 cut(s)	1643, 1694, 1765, 1990, 2129
HpySE526I	ACGT	5 cut(s)	1643, 1694, 1765, 1990, 2129
Hsp92I	GRCGYC	1 cut(s)	911
HspAI	GCGC	6 cut(s)	602, 911, 1520, 1689, 1927, 2522
KasI	GGCGCC	1 cut(s)	910
Kpn2I	TCCGGA	1 cut(s)	169
Ksp22I	TGATCA	3 cut(s)	1309, 2709, 2716
LguI	GCTCTTC	2 cut(s)	1957, 2506
LmnI	GCTCC	3 cut(s)	1654, 2032, 2612
LweI	GCATC	6 cut(s)	247, 315, 1757, 1790, 2213, 2235
MabI	ACCWGGT	1 cut(s)	962
MaeI	CTAG	5 cut(s)	227, 1439, 1514, 2604, 2646
MaeII	ACGT	5 cut(s)	1643, 1694, 1765, 1990, 2129
MfeI	CAATTG	1 cut(s)	2466
MflI	RGATCY	1 cut(s)	2672
MhlI	GDGCHC	6 cut(s)	714, 1734, 1969, 1990, 2153, 2501
MlsI	TGGCCA	4 cut(s)	344, 809, 2100, 2487
MluNI	TGGCCA	4 cut(s)	344, 809, 2100, 2487
Mly113I	GGCGCC	1 cut(s)	911
MlyI	GAGTC	6 cut(s)	13, 148, 259, 988, 1012, 2096
MmeI	TCCRAC	2 cut(s)	631, 948
Mox20I	TGGCCA	4 cut(s)	344, 809, 2100, 2487
Mph1103I	ATGCAT	1 cut(s)	2556
MroI	TCCGGA	1 cut(s)	169
MscI	TGGCCA	4 cut(s)	344, 809, 2100, 2487
MslI	CAYNNNNRTG	3 cut(s)	1407, 1637, 2574
Msp20I	TGGCCA	4 cut(s)	344, 809, 2100, 2487
MspA1I	CMGCKG	9 cut(s)	254, 296, 470, 827, 1129, 1376, 1655, 2048, 2629
MspCI	CTTAAG	2 cut(s)	1157, 1547
MspI	CCGG	5 cut(s)	170, 441, 819, 867, 928
MspR9I	CCNGG	4 cut(s)	929, 964, 1536, 2508
MunI	CAATTG	1 cut(s)	2466
Mva1269I	GAATGC	1 cut(s)	1561
MvaI	CCWGG	3 cut(s)	964, 1536, 2508
MvnI	CGCG	1 cut(s)	1507
NarI	GGCGCC	1 cut(s)	911
NciI	CCSGG	1 cut(s)	929
NlaIV	GGNNCC	6 cut(s)	912, 954, 1137, 1266, 1348, 2028
NmeAIII	GCCGAG	1 cut(s)	1002
NmuCI	GTSAC	8 cut(s)	151, 196, 461, 473, 893, 1639, 2033, 2282
NsiI	ATGCAT	1 cut(s)	2556
NspI	RCATGY	1 cut(s)	386
OliI	CACNNNNGTG	1 cut(s)	1637
PciSI	GCTCTTC	2 cut(s)	1957, 2506
PcsI	WCGNNNNNNNCGW	1 cut(s)	579
PctI	GAATGC	1 cut(s)	1561
PfeI	GAWTC	9 cut(s)	137, 306, 670, 921, 1056, 1339, 1682, 1827, 1921
PfoI	TCCNGGA	1 cut(s)	2506
PleI	GAGTC	6 cut(s)	12, 148, 259, 988, 1012, 2095
PluTI	GGCGCC	1 cut(s)	914
PpsI	GAGTC	6 cut(s)	12, 148, 259, 988, 1012, 2095
Ppu21I	YACGTR	1 cut(s)	1766
PshAI	GACNNNNGTC	1 cut(s)	194
PshBI	ATTAAT	2 cut(s)	528, 740
Psp124BI	GAGCTC	3 cut(s)	1969, 2153, 2501
Psp6I	CCWGG	3 cut(s)	962, 1534, 2506
PspEI	GGTNACC	1 cut(s)	2282
PspFI	CCCAGC	2 cut(s)	104, 466
PspGI	CCWGG	3 cut(s)	962, 1534, 2506
PspN4I	GGNNCC	6 cut(s)	912, 954, 1137, 1266, 1348, 2028
PspPI	GGNCC	3 cut(s)	443, 952, 1136
PstI	CTGCAG	3 cut(s)	1585, 2086, 2542
PstNI	CAGNNNCTG	2 cut(s)	1388, 2258
PsuI	RGATCY	1 cut(s)	2672
PvuII	CAGCTG	7 cut(s)	254, 296, 470, 827, 1129, 1655, 2048
RsaI	GTAC	4 cut(s)	1163, 1395, 1945, 2681
RsaNI	GTAC	4 cut(s)	1162, 1394, 1944, 2680
RseI	CAYNNNNRTG	3 cut(s)	1407, 1637, 2574
SacI	GAGCTC	3 cut(s)	1969, 2153, 2501
SapI	GCTCTTC	2 cut(s)	1957, 2506
Sau96I	GGNCC	3 cut(s)	443, 952, 1136
SbfI	CCTGCAGG	1 cut(s)	2542
SchI	GAGTC	6 cut(s)	13, 148, 259, 988, 1012, 2096
ScrFI	CCNGG	4 cut(s)	929, 964, 1536, 2508
SdaI	CCTGCAGG	1 cut(s)	2542
SduI	GDGCHC	6 cut(s)	714, 1734, 1969, 1990, 2153, 2501
SexAI	ACCWGGT	1 cut(s)	962
SfaNI	GCATC	6 cut(s)	247, 315, 1757, 1790, 2213, 2235
SfcI	CTRYAG	5 cut(s)	330, 1581, 2082, 2538, 2734
SfoI	GGCGCC	1 cut(s)	912
SinI	GGWCC	1 cut(s)	443
SmiMI	CAYNNNNRTG	3 cut(s)	1407, 1637, 2574
SmlI	CTYRAG	6 cut(s)	1070, 1157, 1547, 1861, 2152, 2336
SmoI	CTYRAG	6 cut(s)	1070, 1157, 1547, 1861, 2152, 2336
Sse8387I	CCTGCAGG	1 cut(s)	2542
SspDI	GGCGCC	1 cut(s)	910
SspMI	CTAG	5 cut(s)	227, 1439, 1514, 2604, 2646
SstI	GAGCTC	3 cut(s)	1969, 2153, 2501
StyD4I	CCNGG	4 cut(s)	927, 962, 1534, 2506
StyI	CCWWGG	1 cut(s)	226
TaaI	ACNGT	7 cut(s)	32, 583, 1185, 1409, 1840, 1903, 2684
TaiI	ACGT	5 cut(s)	1646, 1697, 1768, 1993, 2132
TaqI	TCGA	3 cut(s)	75, 765, 924
TatI	WGTACW	1 cut(s)	2679
TauI	GCSGC	5 cut(s)	1379, 1475, 2414, 2465, 2632
TfiI	GAWTC	9 cut(s)	137, 306, 670, 921, 1056, 1339, 1682, 1827, 1921
TseFI	GTSAC	8 cut(s)	151, 196, 461, 473, 893, 1639, 2033, 2282
Tsp45I	GTSAC	8 cut(s)	151, 196, 461, 473, 893, 1639, 2033, 2282
TspGWI	ACGGA	3 cut(s)	653, 1696, 2758
Vha464I	CTTAAG	2 cut(s)	1157, 1547
VpaK11BI	GGWCC	1 cut(s)	443
VspI	ATTAAT	2 cut(s)	528, 740
XapI	RAATTY	3 cut(s)	1278, 2059, 2765
XbaI	TCTAGA	1 cut(s)	1513
XceI	RCATGY	1 cut(s)	386
XmaJI	CCTAGG	1 cut(s)	226
XspI	CTAG	5 cut(s)	227, 1439, 1514, 2604, 2646
Zsp2I	ATGCAT	1 cut(s)	2556

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.