Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0010392

Physical Location & Seq

Genomic Coordinates Forward (+)

18899708 .. 18905824

Gene Structure 6117 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1202500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGAAGCTTCGATGGAGCCCAATACCAATCCTTTTGTACCCTTTTCTCCTCCAAATTACCCTTTCCACAGCTTTCTCCCCAACCCCAATGAAGTGTACGGACACAACTCGCCTCTGCACTTCCTTTTTGGCCTTTAAGCCGGAACCCAATGAGACCCTCTCAGTGATTCAGAGCATGTTCGACGTATTGCCGGAAGATGTGACCGTTGAGGGCGGCGACGGGCGGGGCTACGTGTTTGTGAAGAAGAACTGTTCTTGTGCGAAGGGGATAAAGAGTTACTTGACCAACACAACGTTTACTGTGAAATCTGCAGATGGGTATGTTTATGACATGGTTATGGAGGCCTATGGTGGGCTAACTTTTCTGCGCAATACCACTAGGCGGGCCCGATATGGCGCCGTTGTGTCGTTGAGGCTGATGTGCGGGTGCTCGAGTGGGTTGTGGAACTATCTGATGAGTTATGTGATGAGGGATGGGGATAGCATTGAGTCTCTGGCTAGCCGGTTCGGGGTTAGTATGGATAGCATTGAGAAGGTCAATGGGATTAGTGATCCTGATAATGTGACTGTTGGTGCTTTGTATTACATACCTTTGAATTCAGTTCCTGGTGAGCCTTATCCTATGGAGACGATTTCTCCCGCTCCTGTTCCTTCACCATCCAATGCCAGTGTTTCAGAAAATGGAGAAAATCATAAGCCGCATCTGCCATATTTATGGATTGTAGGGAGTTTAGGGATCATTCTTGTTGTGATCATATTAGGCATAGTTTTATATGTTTGCCTGAGGTCTTCAAGCTGCTTTACTGAAGCACAAAGAAGCAGTTCAAAAGATCCTGATGGTCAAATTAGGTTTCGTGTTCTTCGAAAGCCAAGTTTTTGTTGTGCTTCAGGAAGGTACATGTGTTGCACATCTTCAGATTGGAAGCAAACTAATGGAGATCCTAGCAGCCAGCAGATAACTGTCCCCAAAGCTATTGGCAGTCATGTACTTGACATAGAGAAGCCTGTTGTTTTCACATATGAAGATATTTGTTCCTCAACAGATGGGTTTTCTGATTCACGTCTTCTGGGCCATGGAAGATATGGTTCCGTGTATTATGGCCTCCTCCGTGAGCAGGAAGTTGCTATTAAAAGAATGACTGCTACAAAAACTAAAGAGTTTCTGTCAGAAATAAAAGTTCTATGCAAGGTTCATCATTCAAATCTGGTAGAATTGATTGGTTATGCAGCAAGTGATGAAGAGCTCTTTCTTATATATGAATATGCCCAGAAAGGTTCACTTAAAAGCCATCTGCATGATCCTCAGAACAAAGGTCATACATCACTTTCCTGGATCATGAGGGTCCAGATTGCTCTTGATGCTGCTAGAGCTCTCGAGTACATCCATGAGCACACGAAATCGCATTATGTCCACCGGGATATTAAGACAAGCAACATCTTGCTTGATGGTTCCTTCAGGGCAAAGATTTCAGACTTCGGGTTGGCAAAAATTTTTGGTAAGACGAGTGATGGAGAAGCTACTGTAACCAAAGTTGTTGGTACATACGGTTATCTGGCTCCAGAATACTTGAGTGATGGCCGTGCTACTGCAAAAAGTGATATTTATGCTTTTGGAGTTGTTCTTTTTGAGCTTATATCGGGGAAGGAGGCCGTTATACGAACTGAAGGCACAGCCGCAAAAAATTCCGAAAGACGTTCACTGGTGTCAATTATGCAAACAGCTCTTAGGACTTCACCAGACTCCGTGATCATGTCAAACCTGAAAGATTACATTGATCCAAATATGATGGACTTGTATCCTCATGATTGCCCATTCAAGGTGGCCATGATAGCAAAGCAATGTGTGGATGACGACCCCATCCTACGGCCCGACATGAAAGGAGTCGTGATTTCGCTATCACAGATCCTCCTAACCTCAGTGGAGTGGGAAGCTACTCTTGCAGGGAACAGCCAGGTATTCAGTGGCCTTGTTCAGGGAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023051 GO:0023052 GO:0023056 GO:0031347 GO:0031348 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1901419 GO:1901421 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

661

Amino Acids

72.93

Weight (kDa)

6.71

Isoelectric Point (pI)

41.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM3_LYK4_5	PF23473	150 - 188	1.4e-06	LYK4/5 LysM3 domain
LysM	PF01476	156 - 191	2.5e-06	LysM domain
Pkinase	PF00069	351 - 625	7.1e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	354 - 629	4.5e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51940
fragaria_vesca	FvH4_6g32430 FvH4_6g32430
malus_domestica	MD09G1202500.v1.1 MD17G1183700.v1.1
prunus_persica	Prupe.3G058700_v2.0.a1 Prupe.3G058700_v2.0.a1
pyrus_communis	pycom09g11950 pycom17g19310
rosa_chinensis	RchiOBHm_Chr2g0140581
rosa_laevigata	RLG00000019879
rosa_multiflora	Rmu_ssc0000213.1_g000121
rosa_roxburghii	Rroxscaffold_153G00436620 Rroxscaffold_2G00104660
rosa_rugosa	Rorug02G0363700
rosa_samantha	Rh2BG424600 Rh2BG424800 Rh2CG401300 Rh2DG434700
rosa_wichuraiana	Rw2G033960 Rw2G033980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	368
AccB1I	GGYRCC	1 cut(s)	395
AccBSI	CCGCTC	1 cut(s)	641
AciI	CCGC	7 cut(s)	213, 223, 382, 423, 639, 698, 1674
AclI	AACGTT	1 cut(s)	293
AclWI	GGATC	8 cut(s)	545, 743, 824, 932, 1292, 1340, 1769, 1897
AcoI	YGGCCR	2 cut(s)	1576, 1821
AcsI	RAATTY	3 cut(s)	595, 1488, 1681
AcuI	CTGAAG	5 cut(s)	825, 870, 897, 1438, 1683
AcyI	GRCGYC	1 cut(s)	396
AfaI	GTAC	6 cut(s)	38, 97, 896, 987, 1379, 1540
AfiI	CCNNNNNNNGG	7 cut(s)	351, 381, 508, 1114, 1816, 1863, 1972
AflIII	ACRYGT	2 cut(s)	231, 897
AgsI	TTSAA	5 cut(s)	595, 792, 825, 1200, 1816
AjiI	CACGTC	1 cut(s)	1061
AjnI	CCWGG	3 cut(s)	604, 1328, 1950
Alw21I	GWGCWC	4 cut(s)	431, 1245, 1372, 1392
Alw26I	GTCTC	3 cut(s)	146, 495, 620
AlwI	GGATC	8 cut(s)	545, 743, 824, 932, 1292, 1340, 1769, 1897
AlwNI	CAGNNNCTG	1 cut(s)	605
Ama87I	CYCGRG	2 cut(s)	430, 1373
ApaI	GGGCCC	1 cut(s)	388
ApeKI	GCWGC	4 cut(s)	795, 945, 1226, 1361
ApoI	RAATTY	3 cut(s)	595, 1488, 1681
Asp700I	GAANNNNTTC	1 cut(s)	820
AspLEI	GCGC	2 cut(s)	369, 398
AspS9I	GGNCC	5 cut(s)	384, 385, 1069, 1342, 1866
AsuC2I	CCSGG	1 cut(s)	1415
AsuHPI	GGTGA	3 cut(s)	620, 645, 1725
AsuII	TTCGAA	1 cut(s)	862
AsuNHI	GCTAGC	1 cut(s)	497
AvaI	CYCGRG	2 cut(s)	430, 1373
AvaII	GGWCC	1 cut(s)	1342
AxyI	CCTNAGG	1 cut(s)	782
BaeGI	GKGCMC	1 cut(s)	388
BaeI	ACNNNNGTAYC	2 cut(s)	886, 919
BalI	TGGCCA	1 cut(s)	1823
BanI	GGYRCC	1 cut(s)	395
BanII	GRGCYC	4 cut(s)	20, 388, 1245, 1372
BbsI	GAAGAC	2 cut(s)	780, 1055
Bbv12I	GWGCWC	4 cut(s)	431, 1245, 1372, 1392
BbvI	GCAGC	4 cut(s)	782, 957, 1238, 1348
BceAI	ACGGC	4 cut(s)	383, 1563, 1634, 1880
BciT130I	CCWGG	3 cut(s)	606, 1330, 1952
BciVI	GTATCC	1 cut(s)	1806
BclI	TGATCA	2 cut(s)	750, 1746
BcnI	CCSGG	1 cut(s)	1415
BcoDI	GTCTC	3 cut(s)	146, 495, 620
BfaI	CTAG	4 cut(s)	378, 498, 942, 1365
BfmI	CTRYAG	1 cut(s)	309
BfoI	RGCGCY	1 cut(s)	399
BfuI	GTATCC	1 cut(s)	1806
BisI	GCNGC	7 cut(s)	214, 698, 796, 946, 1227, 1362, 1674
BlsI	GCNGC	7 cut(s)	215, 699, 797, 947, 1228, 1363, 1675
Bme1390I	CCNGG	4 cut(s)	606, 1330, 1415, 1952
Bme18I	GGWCC	1 cut(s)	1342
BmeT110I	CYCGRG	2 cut(s)	430, 1373
BmgBI	CACGTC	1 cut(s)	1061
BmgT120I	GGNCC	5 cut(s)	384, 385, 1069, 1342, 1866
BmiI	GGNNCC	8 cut(s)	17, 144, 386, 397, 1087, 1343, 1450, 1557
BmrFI	CCNGG	4 cut(s)	606, 1330, 1415, 1952
BmsI	GCATC	2 cut(s)	709, 1348
BmtI	GCTAGC	1 cut(s)	501
BpiI	GAAGAC	2 cut(s)	780, 1055
BplI	GAGNNNNNCTC	2 cut(s)	143, 175
BpmI	CTGGAG	1 cut(s)	1542
Bpu14I	TTCGAA	1 cut(s)	862
BpuEI	CTTGAG	1 cut(s)	1588
BpuMI	CCSGG	1 cut(s)	1415
BsaAI	YACGTR	1 cut(s)	232
BsaHI	GRCGYC	1 cut(s)	396
BsaI	GGTCTC	1 cut(s)	146
BsaJI	CCNNGG	1 cut(s)	1072
BsaXI	ACNNNNNCTCC	4 cut(s)	619, 649, 1890, 1920
Bsc4I	CCNNNNNNNGG	7 cut(s)	351, 381, 508, 1114, 1816, 1863, 1972
Bse118I	RCCGGY	1 cut(s)	501
Bse1I	ACTGG	2 cut(s)	666, 1704
Bse21I	CCTNAGG	1 cut(s)	782
Bse3DI	GCAATG	1 cut(s)	1844
BseBI	CCWGG	3 cut(s)	606, 1330, 1952
BseDI	CCNNGG	1 cut(s)	1072
BseGI	GGATG	5 cut(s)	478, 656, 1380, 1852, 1857
BseLI	CCNNNNNNNGG	7 cut(s)	351, 381, 508, 1114, 1816, 1863, 1972
BseMI	GCAATG	1 cut(s)	1844
BseMII	CTCAG	4 cut(s)	174, 773, 1316, 1929
BseNI	ACTGG	2 cut(s)	666, 1704
BseRI	GAGGAG	2 cut(s)	38, 1094
BseSI	GKGCMC	1 cut(s)	388
BseXI	GCAGC	4 cut(s)	782, 957, 1238, 1348
BsgI	GTGCAG	1 cut(s)	100
BshNI	GGYRCC	1 cut(s)	395
BsiHKAI	GWGCWC	4 cut(s)	431, 1245, 1372, 1392
BsiHKCI	CYCGRG	2 cut(s)	430, 1373
BsiSI	CCGG	4 cut(s)	140, 191, 502, 1414
BslFI	GGGAC	1 cut(s)	947
BslI	CCNNNNNNNGG	7 cut(s)	351, 381, 508, 1114, 1816, 1863, 1972
BsmAI	GTCTC	3 cut(s)	146, 495, 620
BsmBI	CGTCTC	1 cut(s)	620
BsmFI	GGGAC	1 cut(s)	947
Bso31I	GGTCTC	1 cut(s)	146
BsoBI	CYCGRG	2 cut(s)	430, 1373
Bsp119I	TTCGAA	1 cut(s)	862
Bsp120I	GGGCCC	1 cut(s)	384
Bsp1286I	GDGCHC	6 cut(s)	20, 388, 431, 1245, 1372, 1392
Bsp19I	CCATGG	1 cut(s)	1072
BspACI	CCGC	7 cut(s)	213, 223, 382, 423, 639, 698, 1674
BspCNI	CTCAG	4 cut(s)	173, 774, 1315, 1928
BspHI	TCATGA	2 cut(s)	1335, 1801
BspLI	GGNNCC	8 cut(s)	17, 144, 386, 397, 1087, 1343, 1450, 1557
BspMAI	CTGCAG	1 cut(s)	313
BspOI	GCTAGC	1 cut(s)	501
BspPI	GGATC	8 cut(s)	545, 743, 824, 932, 1292, 1340, 1769, 1897
BspQI	GCTCTTC	1 cut(s)	1233
BspT104I	TTCGAA	1 cut(s)	862
BspT107I	GGYRCC	1 cut(s)	395
BspTNI	GGTCTC	1 cut(s)	146
BsrBI	CCGCTC	1 cut(s)	641
BsrDI	GCAATG	1 cut(s)	1844
BsrFI	RCCGGY	1 cut(s)	501
BsrI	ACTGG	2 cut(s)	666, 1704
BssAI	RCCGGY	1 cut(s)	501
BssECI	CCNNGG	1 cut(s)	1072
BssNI	GRCGYC	1 cut(s)	396
BssT1I	CCWWGG	1 cut(s)	1072
Bst2UI	CCWGG	3 cut(s)	606, 1330, 1952
Bst4CI	ACNGT	7 cut(s)	205, 251, 301, 568, 961, 1522, 1547
Bst6I	CTCTTC	1 cut(s)	1233
BstACI	GRCGYC	1 cut(s)	396
BstBAI	YACGTR	1 cut(s)	232
BstBI	TTCGAA	1 cut(s)	862
BstC8I	GCNNGC	3 cut(s)	384, 499, 950
BstDEI	CTNAG	5 cut(s)	160, 782, 1302, 1724, 1915
BstDSI	CCRYGG	1 cut(s)	1072
BstENI	CCTNNNNNAGG	1 cut(s)	1970
BstF5I	GGATG	5 cut(s)	478, 656, 1380, 1852, 1857
BstH2I	RGCGCY	1 cut(s)	399
BstHHI	GCGC	2 cut(s)	369, 398
BstMAI	GTCTC	3 cut(s)	146, 495, 620
BstMWI	GCNNNNNNNGC	5 cut(s)	703, 1358, 1367, 1829, 1937
BstNI	CCWGG	3 cut(s)	606, 1330, 1952
BstNSI	RCATGY	2 cut(s)	178, 901
BstSCI	CCNGG	4 cut(s)	604, 1328, 1413, 1950
BstSFI	CTRYAG	1 cut(s)	309
BstSLI	GKGCMC	1 cut(s)	388
BstV1I	GCAGC	4 cut(s)	782, 957, 1238, 1348
BstV2I	GAAGAC	2 cut(s)	780, 1055
BstX2I	RGATCY	3 cut(s)	829, 937, 1902
BstXI	CCANNNNNNTGG	1 cut(s)	714
BstYI	RGATCY	3 cut(s)	829, 937, 1902
Bsu36I	CCTNAGG	1 cut(s)	782
BsuI	GTATCC	1 cut(s)	1806
BtgI	CCRYGG	1 cut(s)	1072
BtrI	CACGTC	1 cut(s)	1061
BtsCI	GGATG	5 cut(s)	478, 656, 1380, 1852, 1857
BtsIMutI	CAGTG	5 cut(s)	168, 673, 1697, 1923, 1966
Cac8I	GCNNGC	3 cut(s)	384, 499, 950
CaiI	CAGNNNCTG	1 cut(s)	605
CciI	TCATGA	2 cut(s)	1335, 1801
CfoI	GCGC	2 cut(s)	369, 398
Cfr10I	RCCGGY	1 cut(s)	501
Cfr13I	GGNCC	5 cut(s)	384, 385, 1069, 1342, 1866
Csp6I	GTAC	6 cut(s)	37, 96, 895, 986, 1378, 1539
CviQI	GTAC	6 cut(s)	37, 96, 895, 986, 1378, 1539
DdeI	CTNAG	5 cut(s)	160, 782, 1302, 1724, 1915
DinI	GGCGCC	1 cut(s)	397
EaeI	YGGCCR	2 cut(s)	1576, 1821
Eam1104I	CTCTTC	1 cut(s)	1233
EarI	CTCTTC	1 cut(s)	1233
Ecl136II	GAGCTC	2 cut(s)	1243, 1370
Eco130I	CCWWGG	1 cut(s)	1072
Eco147I	AGGCCT	1 cut(s)	344
Eco24I	GRGCYC	4 cut(s)	20, 388, 1245, 1372
Eco31I	GGTCTC	1 cut(s)	146
Eco47I	GGWCC	1 cut(s)	1342
Eco53kI	GAGCTC	2 cut(s)	1243, 1370
Eco57I	CTGAAG	5 cut(s)	825, 870, 897, 1438, 1683
Eco81I	CCTNAGG	1 cut(s)	782
Eco88I	CYCGRG	2 cut(s)	430, 1373
EcoICRI	GAGCTC	2 cut(s)	1243, 1370
EcoNI	CCTNNNNNAGG	1 cut(s)	1970
EcoRI	GAATTC	1 cut(s)	595
EcoRII	CCWGG	3 cut(s)	604, 1328, 1950
EcoT14I	CCWWGG	1 cut(s)	1072
EcoT38I	GRGCYC	4 cut(s)	20, 388, 1245, 1372
EgeI	GGCGCC	1 cut(s)	397
EheI	GGCGCC	1 cut(s)	397
ErhI	CCWWGG	1 cut(s)	1072
Esp3I	CGTCTC	1 cut(s)	620
FalI	AAGNNNNNCTT	6 cut(s)	263, 295, 1263, 1295, 1920, 1952
FaqI	GGGAC	1 cut(s)	947
FauI	CCCGC	4 cut(s)	216, 375, 416, 646
FauNDI	CATATG	1 cut(s)	1018
FbaI	TGATCA	2 cut(s)	750, 1746
Fnu4HI	GCNGC	7 cut(s)	214, 698, 796, 946, 1227, 1362, 1674
FokI	GGATG	5 cut(s)	485, 643, 1367, 1844, 1859
FriOI	GRGCYC	4 cut(s)	20, 388, 1245, 1372
Fsp4HI	GCNGC	7 cut(s)	214, 698, 796, 946, 1227, 1362, 1674
FspBI	CTAG	4 cut(s)	378, 498, 942, 1365
FspI	TGCGCA	1 cut(s)	368
GlaI	GCGC	2 cut(s)	368, 397
GluI	GCNGC	7 cut(s)	214, 698, 796, 946, 1227, 1362, 1674
GsuI	CTGGAG	1 cut(s)	1542
HaeII	RGCGCY	1 cut(s)	399
HapII	CCGG	4 cut(s)	140, 191, 502, 1414
HhaI	GCGC	2 cut(s)	369, 398
Hin1I	GRCGYC	1 cut(s)	396
Hin6I	GCGC	2 cut(s)	367, 396
HinP1I	GCGC	2 cut(s)	367, 396
HindIII	AAGCTT	1 cut(s)	5
HinfI	GANTC	5 cut(s)	166, 488, 1055, 1739, 1881
HpaII	CCGG	4 cut(s)	140, 191, 502, 1414
HphI	GGTGA	3 cut(s)	620, 645, 1725
Hpy166II	GTNNAC	5 cut(s)	96, 297, 1277, 1411, 1697
Hpy188I	TCNGA	9 cut(s)	171, 453, 676, 916, 1054, 1168, 1305, 1471, 1687
Hpy8I	GTNNAC	5 cut(s)	96, 297, 1277, 1411, 1697
Hpy99I	CGWCG	2 cut(s)	185, 221
HpyAV	CCTTC	7 cut(s)	256, 526, 660, 885, 1462, 1636, 1658
HpyCH4III	ACNGT	7 cut(s)	205, 251, 301, 568, 961, 1522, 1547
HpyCH4IV	ACGT	5 cut(s)	183, 231, 293, 1060, 1693
HpyCH4V	TGCA	9 cut(s)	117, 311, 906, 1185, 1226, 1294, 1589, 1714, 1940
HpyF10VI	GCNNNNNNNGC	5 cut(s)	703, 1358, 1367, 1829, 1937
HpyF3I	CTNAG	5 cut(s)	160, 782, 1302, 1724, 1915
HpySE526I	ACGT	5 cut(s)	183, 231, 293, 1060, 1693
Hsp92I	GRCGYC	1 cut(s)	396
HspAI	GCGC	2 cut(s)	367, 396
KasI	GGCGCC	1 cut(s)	395
Ksp22I	TGATCA	2 cut(s)	750, 1746
LguI	GCTCTTC	1 cut(s)	1233
LmnI	GCTCC	3 cut(s)	15, 646, 1561
Lsp1109I	GCAGC	4 cut(s)	782, 957, 1238, 1348
LweI	GCATC	2 cut(s)	709, 1348
MaeI	CTAG	4 cut(s)	378, 498, 942, 1365
MaeII	ACGT	5 cut(s)	183, 231, 293, 1060, 1693
MaeIII	GTNAC	4 cut(s)	199, 275, 562, 1522
MbiI	CCGCTC	1 cut(s)	641
MflI	RGATCY	3 cut(s)	829, 937, 1902
MhlI	GDGCHC	6 cut(s)	20, 388, 431, 1245, 1372, 1392
MlsI	TGGCCA	1 cut(s)	1823
MluCI	AATT	7 cut(s)	54, 595, 843, 1211, 1488, 1681, 1707
MluNI	TGGCCA	1 cut(s)	1823
Mly113I	GGCGCC	1 cut(s)	396
MlyI	GAGTC	3 cut(s)	497, 1733, 1890
Mox20I	TGGCCA	1 cut(s)	1823
MroXI	GAANNNNTTC	1 cut(s)	820
MscI	TGGCCA	1 cut(s)	1823
MseI	TTAA	4 cut(s)	135, 1128, 1281, 1422
MslI	CAYNNNNRTG	3 cut(s)	335, 712, 1293
Msp20I	TGGCCA	1 cut(s)	1823
MspI	CCGG	4 cut(s)	140, 191, 502, 1414
MspR9I	CCNGG	4 cut(s)	606, 1330, 1415, 1952
MvaI	CCWGG	3 cut(s)	606, 1330, 1952
MwoI	GCNNNNNNNGC	5 cut(s)	703, 1358, 1367, 1829, 1937
NarI	GGCGCC	1 cut(s)	396
NciI	CCSGG	1 cut(s)	1415
NcoI	CCATGG	1 cut(s)	1072
NdeI	CATATG	1 cut(s)	1018
NheI	GCTAGC	1 cut(s)	497
NlaIV	GGNNCC	8 cut(s)	17, 144, 386, 397, 1087, 1343, 1450, 1557
NmuCI	GTSAC	2 cut(s)	199, 562
NsbI	TGCGCA	1 cut(s)	368
NspI	RCATGY	2 cut(s)	178, 901
NspV	TTCGAA	1 cut(s)	862
PaeR7I	CTCGAG	2 cut(s)	430, 1373
PagI	TCATGA	2 cut(s)	1335, 1801
PceI	AGGCCT	1 cut(s)	344
PciI	ACATGT	1 cut(s)	897
PciSI	GCTCTTC	1 cut(s)	1233
PcsI	WCGNNNNNNNCGW	1 cut(s)	859
PdmI	GAANNNNTTC	1 cut(s)	820
PfeI	GAWTC	2 cut(s)	166, 1055
PfoI	TCCNGGA	1 cut(s)	1328
PkrI	GCNGC	7 cut(s)	215, 699, 797, 947, 1228, 1363, 1675
PleI	GAGTC	3 cut(s)	496, 1733, 1889
PluTI	GGCGCC	1 cut(s)	399
PpsI	GAGTC	3 cut(s)	496, 1733, 1889
Ppu21I	YACGTR	1 cut(s)	232
PscI	ACATGT	1 cut(s)	897
Psp124BI	GAGCTC	2 cut(s)	1245, 1372
Psp1406I	AACGTT	1 cut(s)	293
Psp6I	CCWGG	3 cut(s)	604, 1328, 1950
PspGI	CCWGG	3 cut(s)	604, 1328, 1950
PspN4I	GGNNCC	8 cut(s)	17, 144, 386, 397, 1087, 1343, 1450, 1557
PspOMI	GGGCCC	1 cut(s)	384
PspPI	GGNCC	5 cut(s)	384, 385, 1069, 1342, 1866
PspXI	VCTCGAGB	1 cut(s)	430
PstI	CTGCAG	1 cut(s)	313
PstNI	CAGNNNCTG	1 cut(s)	605
PsuI	RGATCY	3 cut(s)	829, 937, 1902
RsaI	GTAC	6 cut(s)	38, 97, 896, 987, 1379, 1540
RsaNI	GTAC	6 cut(s)	37, 96, 895, 986, 1378, 1539
RseI	CAYNNNNRTG	3 cut(s)	335, 712, 1293
SacI	GAGCTC	2 cut(s)	1245, 1372
SapI	GCTCTTC	1 cut(s)	1233
SaqAI	TTAA	4 cut(s)	135, 1128, 1281, 1422
SatI	GCNGC	7 cut(s)	214, 698, 796, 946, 1227, 1362, 1674
Sau96I	GGNCC	5 cut(s)	384, 385, 1069, 1342, 1866
SchI	GAGTC	3 cut(s)	497, 1733, 1890
ScrFI	CCNGG	4 cut(s)	606, 1330, 1415, 1952
SduI	GDGCHC	6 cut(s)	20, 388, 431, 1245, 1372, 1392
SfaNI	GCATC	2 cut(s)	709, 1348
SfcI	CTRYAG	1 cut(s)	309
SfoI	GGCGCC	1 cut(s)	397
Sfr274I	CTCGAG	2 cut(s)	430, 1373
SfuI	TTCGAA	1 cut(s)	862
SinI	GGWCC	1 cut(s)	1342
SlaI	CTCGAG	2 cut(s)	430, 1373
SmiMI	CAYNNNNRTG	3 cut(s)	335, 712, 1293
SmlI	CTYRAG	3 cut(s)	430, 1373, 1567
SmoI	CTYRAG	3 cut(s)	430, 1373, 1567
Sse9I	AATT	7 cut(s)	54, 595, 843, 1211, 1488, 1681, 1707
SseBI	AGGCCT	1 cut(s)	344
SsiI	CCGC	7 cut(s)	213, 223, 382, 423, 639, 698, 1674
SspDI	GGCGCC	1 cut(s)	395
SspMI	CTAG	4 cut(s)	378, 498, 942, 1365
SstI	GAGCTC	2 cut(s)	1245, 1372
StuI	AGGCCT	1 cut(s)	344
StyD4I	CCNGG	4 cut(s)	604, 1328, 1413, 1950
StyI	CCWWGG	1 cut(s)	1072
TaaI	ACNGT	7 cut(s)	205, 251, 301, 568, 961, 1522, 1547
TaiI	ACGT	5 cut(s)	186, 234, 296, 1063, 1696
TaqI	TCGA	5 cut(s)	10, 180, 431, 862, 1374
TasI	AATT	7 cut(s)	54, 595, 843, 1211, 1488, 1681, 1707
TatI	WGTACW	2 cut(s)	985, 1377
TauI	GCSGC	3 cut(s)	216, 700, 1676
TfiI	GAWTC	2 cut(s)	166, 1055
Tru1I	TTAA	4 cut(s)	135, 1128, 1281, 1422
Tru9I	TTAA	4 cut(s)	135, 1128, 1281, 1422
TscAI	CASTG	5 cut(s)	168, 673, 1704, 1923, 1966
TseFI	GTSAC	2 cut(s)	199, 562
TseI	GCWGC	4 cut(s)	795, 945, 1226, 1361
Tsp45I	GTSAC	2 cut(s)	199, 562
TspDTI	ATGAA	7 cut(s)	17, 104, 1035, 1181, 1251, 1272, 1889
TspGWI	ACGGA	4 cut(s)	113, 1078, 1097, 1732
TspRI	CASTG	5 cut(s)	168, 673, 1704, 1923, 1966
VpaK11BI	GGWCC	1 cut(s)	1342
XagI	CCTNNNNNAGG	1 cut(s)	1970
XapI	RAATTY	3 cut(s)	595, 1488, 1681
XceI	RCATGY	2 cut(s)	178, 901
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1079, 1958
XhoI	CTCGAG	2 cut(s)	430, 1373
XmnI	GAANNNNTTC	1 cut(s)	820
XspI	CTAG	4 cut(s)	378, 498, 942, 1365

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.