Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010392

Physical Location & Seq

Genomic Coordinates Reverse (-)

58057089 .. 58062936

Gene Structure 5848 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ51099

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGAAGCTTCAATGGGCACCTTTAGCAATCCTACTAAGCCTTCTTTTTCTTCAGTTTACCTCAGCAGAGCCAACACCCATGAATTGTACGGACACGACTCGTCTCTGCACATCGTTCCTGGCCTTCAAGCCCGAACCCAATCAGACCCTGCCGGTGATTCAGTCCATGTTCGACGTGTTACCGGAAGACGTCACCGTCGGCGACCGTGGCTACGTCTTCATCAAAAAGAACTGTTCTTGCGCTTCTGGGGTCAACGAGTATTTGACCAACACGACGTTTACGGTGAGATCGAGTGAAGGGTATGTGTCTGACGTGGTGAATGAGGCCTATGGTGGCCTGACTTTCCTGCCCAACTCGACGAGGCGGGCCAGAAACGGCGCCGTTGTGTGGCTGAGGCTGCTGTGCGGGTGTTCGAGTGGGCTGTGGAACTATTTGATGAGCTATGTGATGGGGGAGGGGGATAGCATTGAGTCTTTGGCGAGTCGGTTCGGGGTTAGTATGGATAGTATTGAGAAAGTTAATGGGATTGTTGATCCTGATAATGTCACTGTTGGTGCTCTGTATTATATACCTTTGAATTCAGTTCCTGGTGATCCTTATCCTTTGGAGACTATTTCTCCTGCTCCTTCTCCTGCTCCTGCTCCACCCGTTGACAATTTGTCAGCAAATCATGTGAATCATAAGGCGCATTTGCCCTATTTATGGATCGTAGGAAGTCTGGGGTTAGTTCTTGTTGTGATAGTAATAGGTATAGTTCTATATGTTTGCCTGAGGTCATCAAACTGCTGCGGTGAAGCACAAAGAAGTCACTCAAAAGATCCTGATCGTAAGATTAGGTTTCACATTCTTCGGAGCCCCAGTTTCTTTTGTGGTTCAGGAAGGTTCACCTGTTGTACGTCTGCTGATTGGAAGCAAACCAATGGGGATTCTAGCAACCAGCAGATAACTATTCCCAAAGCTCTTGGCAGTCATGTACTTGACATGGAAAAACCGGTGGTTTTTACATATGAAGAAATCTTTTCCTCAACAGATGGATTCTCTGATTCACGTCTTCTGGGAAATGGAACTTATGGTTCTGTGTATTATGGCTTACTTCATGAGCAGGAAGTTGCTATTAAAAGAATGACTGTTACAAAAACCAAAGAATTTCTAGCAGAAGTAAAAGTTCTATGCAGGGTTCATCATTCTAATCTGGTAGAATTGATTGGTTATGCAGCAACTGAAGATGAGCTCTTCTTAATATATGAGTACGCCCAAAAAGGTTCACTTAAAAGCCATTTGCATGATCCTCAGAACAAGGGTCAAACGTCACTTTCCTGGATCATGAGGCTCCAGATTGCTCTTGATGCTGCTAGAGGTCTTGAGTACATCCATGAGCACACTAAAGCTCATTATGTCCACCGGGATATCAAGACAAGCAACATCTTGCTTGATGGTGCCTTCAGGGGAAAGATTTCAGATTTTGGATTGGCAAAACTTGTTGGTAAAACAGGTGAAGGAGAAGCTACGGTAACCAAAGTTGTTGGTACATATGGTTATCTGGCTCCAGAATACTTGAGCGATGGGCGTGCTACTACAAAAAGTGATATTTATGCTTTTGGAGTTGTTCTCTTCGAGATTTTATCAGGGAAGGAGGCTGTTATACGAACTGAAGGCACAGTTACAAAAAATCCTGAAAGACGCTCACTGGTATCCATTATGCAAGCAGCTCTTAAAAGCGCACCTGACTCCATGAGTATGTCAAGCTTGAAAGATTACATTGATCCAAATCTGATGGACTTGTATCCCCATGATTGTCTACTCAAGGTGGCCATGATCGCTAAGCAATGTGTAGATGAAGATCCCATCCTACGGCCTGACATGAAACAAATTGTTATTTCCCTGTCACAAATCCTCCTATCCTCGGTCGAGTGGGAAGCTACTCTTGCGGGGAACAGCCAGGTATTCAGTGGCCTTGTTCAGGGAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023051 GO:0023052 GO:0023056 GO:0031347 GO:0031348 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1901419 GO:1901421 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

656

Amino Acids

72.17

Weight (kDa)

6.0

Isoelectric Point (pI)

38.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM3_LYK4_5	PF23473	144 - 181	7.9e-06	LYK4/5 LysM3 domain
LysM	PF01476	152 - 185	8.1e-06	LysM domain
Pkinase	PF00069	347 - 625	2.2e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	350 - 627	7e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51940
fragaria_vesca	FvH4_6g32430 FvH4_6g32430
malus_domestica	MD09G1202500.v1.1 MD17G1183700.v1.1
prunus_persica	Prupe.3G058700_v2.0.a1 Prupe.3G058700_v2.0.a1
pyrus_communis	pycom09g11950 pycom17g19310
rosa_chinensis	RchiOBHm_Chr2g0140581
rosa_laevigata	RLG00000019879
rosa_multiflora	Rmu_ssc0000213.1_g000121
rosa_roxburghii	Rroxscaffold_153G00436620 Rroxscaffold_2G00104660
rosa_rugosa	Rorug02G0363700
rosa_samantha	Rh2BG424600 Rh2BG424800 Rh2CG401300 Rh2DG434700
rosa_wichuraiana	Rw2G033960 Rw2G033980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	194
AatII	GACGTC	1 cut(s)	192
AccB1I	GGYRCC	3 cut(s)	16, 377, 1436
AccI	GTMKAC	1 cut(s)	1798
AciI	CCGC	4 cut(s)	364, 405, 789, 1928
AclWI	GGATC	8 cut(s)	527, 587, 713, 812, 1280, 1328, 1757, 1835
AcoI	YGGCCR	1 cut(s)	1809
AcsI	RAATTY	2 cut(s)	577, 1145
AcuI	CTGAAG	4 cut(s)	35, 1242, 1426, 1671
AcyI	GRCGYC	2 cut(s)	189, 378
AfaI	GTAC	6 cut(s)	88, 895, 975, 1250, 1367, 1528
AfiI	CCNNNNNNNGG	5 cut(s)	387, 702, 1851, 1903, 1960
AflIII	ACRYGT	1 cut(s)	174
AgeI	ACCGGT	1 cut(s)	991
AgsI	TTSAA	4 cut(s)	11, 127, 577, 1750
AhdI	GACNNNNNGTC	1 cut(s)	658
AjiI	CACGTC	3 cut(s)	175, 313, 1049
AjnI	CCWGG	4 cut(s)	117, 586, 1316, 1938
AluBI	AGCT	9 cut(s)	7, 441, 959, 1231, 1388, 1505, 1709, 1746, 1919
AluI	AGCT	9 cut(s)	7, 441, 959, 1231, 1388, 1505, 1709, 1746, 1919
Alw21I	GWGCWC	3 cut(s)	559, 1233, 1380
Alw26I	GTCTC	2 cut(s)	107, 602
AlwI	GGATC	8 cut(s)	527, 587, 713, 812, 1280, 1328, 1757, 1835
AlwNI	CAGNNNCTG	3 cut(s)	148, 587, 1220
AoxI	GGCC	7 cut(s)	120, 324, 334, 366, 1809, 1853, 1951
ApeKI	GCWGC	5 cut(s)	397, 786, 1214, 1349, 1706
ApoI	RAATTY	2 cut(s)	577, 1145
AsiGI	ACCGGT	1 cut(s)	991
Asp700I	GAANNNNTTC	1 cut(s)	1453
AspLEI	GCGC	4 cut(s)	242, 380, 688, 1721
AspS9I	GGNCC	1 cut(s)	366
AsuC2I	CCSGG	1 cut(s)	1403
AsuHPI	GGTGA	8 cut(s)	166, 184, 295, 328, 602, 803, 877, 1505
AxyI	CCTNAGG	1 cut(s)	770
BaeGI	GKGCMC	1 cut(s)	19
BalI	TGGCCA	1 cut(s)	1811
BanI	GGYRCC	3 cut(s)	16, 377, 1436
BanII	GRGCYC	2 cut(s)	857, 1233
BbsI	GAAGAC	3 cut(s)	192, 208, 1043
Bbv12I	GWGCWC	3 cut(s)	559, 1233, 1380
BbvCI	CCTCAGC	2 cut(s)	61, 392
BbvI	GCAGC	5 cut(s)	384, 773, 1226, 1336, 1718
BccI	CCATC	6 cut(s)	442, 1025, 1427, 1556, 1768, 1853
BceAI	ACGGC	3 cut(s)	365, 391, 1868
BcgI	CGANNNNNNTGC	2 cut(s)	1550, 1584
BciT130I	CCWGG	4 cut(s)	119, 588, 1318, 1940
BciVI	GTATCC	2 cut(s)	1702, 1794
BcnI	CCSGG	1 cut(s)	1403
BcoDI	GTCTC	2 cut(s)	107, 602
BfaI	CTAG	3 cut(s)	930, 1151, 1353
BfoI	RGCGCY	1 cut(s)	381
BfuI	GTATCC	2 cut(s)	1702, 1794
BisI	GCNGC	5 cut(s)	398, 787, 1215, 1350, 1707
BlpI	GCTNAGC	1 cut(s)	1821
BlsI	GCNGC	5 cut(s)	399, 788, 1216, 1351, 1708
Bme1390I	CCNGG	5 cut(s)	119, 588, 1318, 1403, 1940
BmeRI	GACNNNNNGTC	1 cut(s)	658
BmgBI	CACGTC	3 cut(s)	175, 313, 1049
BmgT120I	GGNCC	1 cut(s)	366
BmiI	GGNNCC	6 cut(s)	18, 379, 854, 1331, 1438, 1545
BmrFI	CCNGG	5 cut(s)	119, 588, 1318, 1403, 1940
BmrI	ACTGGG	1 cut(s)	852
BmsI	GCATC	1 cut(s)	1336
BmuI	ACTGGG	1 cut(s)	852
BpiI	GAAGAC	3 cut(s)	192, 208, 1043
BplI	GAGNNNNNCTC	2 cut(s)	1593, 1625
BpmI	CTGGAG	2 cut(s)	1316, 1530
Bpu10I	CCTNAGC	2 cut(s)	61, 392
Bpu1102I	GCTNAGC	1 cut(s)	1821
BpuEI	CTTGAG	3 cut(s)	1382, 1576, 1787
BpuMI	CCSGG	1 cut(s)	1403
BsaBI	GATNNNNATC	4 cut(s)	597, 822, 1767, 1839
BsaHI	GRCGYC	2 cut(s)	189, 378
BsaJI	CCNNGG	2 cut(s)	205, 1902
BsaWI	WCCGGW	2 cut(s)	181, 991
BsaXI	ACNNNNNCTCC	6 cut(s)	601, 631, 844, 874, 1878, 1908
Bsc4I	CCNNNNNNNGG	5 cut(s)	387, 702, 1851, 1903, 1960
Bse118I	RCCGGY	2 cut(s)	151, 991
Bse1I	ACTGG	2 cut(s)	858, 1692
Bse21I	CCTNAGG	1 cut(s)	770
Bse3DI	GCAATG	1 cut(s)	1832
Bse8I	GATNNNNATC	4 cut(s)	597, 822, 1767, 1839
BseBI	CCWGG	4 cut(s)	119, 588, 1318, 1940
BseDI	CCNNGG	2 cut(s)	205, 1902
BseGI	GGATG	2 cut(s)	1368, 1845
BseJI	GATNNNNATC	4 cut(s)	597, 822, 1767, 1839
BseLI	CCNNNNNNNGG	5 cut(s)	387, 702, 1851, 1903, 1960
BseMI	GCAATG	1 cut(s)	1832
BseMII	CTCAG	4 cut(s)	75, 383, 761, 1304
BseNI	ACTGG	2 cut(s)	858, 1692
BseSI	GKGCMC	1 cut(s)	19
BseXI	GCAGC	5 cut(s)	384, 773, 1226, 1336, 1718
BsgI	GTGCAG	1 cut(s)	91
Bsh1285I	CGRYCG	2 cut(s)	205, 1908
BshFI	GGCC	7 cut(s)	122, 326, 336, 368, 1811, 1855, 1953
BshNI	GGYRCC	3 cut(s)	16, 377, 1436
BshTI	ACCGGT	1 cut(s)	991
BsiEI	CGRYCG	2 cut(s)	205, 1908
BsiHKAI	GWGCWC	3 cut(s)	559, 1233, 1380
BsiSI	CCGG	4 cut(s)	152, 182, 992, 1402
BslI	CCNNNNNNNGG	5 cut(s)	387, 702, 1851, 1903, 1960
BsmAI	GTCTC	2 cut(s)	107, 602
BsmBI	CGTCTC	1 cut(s)	107
BsnI	GGCC	7 cut(s)	122, 326, 336, 368, 1811, 1855, 1953
Bsp1286I	GDGCHC	5 cut(s)	19, 559, 857, 1233, 1380
Bsp1720I	GCTNAGC	1 cut(s)	1821
BspACI	CCGC	4 cut(s)	364, 405, 789, 1928
BspANI	GGCC	7 cut(s)	122, 326, 336, 368, 1811, 1855, 1953
BspCNI	CTCAG	4 cut(s)	74, 384, 762, 1303
BspHI	TCATGA	2 cut(s)	1096, 1323
BspLI	GGNNCC	6 cut(s)	18, 379, 854, 1331, 1438, 1545
BspPI	GGATC	8 cut(s)	527, 587, 713, 812, 1280, 1328, 1757, 1835
BspQI	GCTCTTC	1 cut(s)	1238
BspT107I	GGYRCC	3 cut(s)	16, 377, 1436
BsrDI	GCAATG	1 cut(s)	1832
BsrFI	RCCGGY	2 cut(s)	151, 991
BsrI	ACTGG	2 cut(s)	858, 1692
BssAI	RCCGGY	2 cut(s)	151, 991
BssECI	CCNNGG	2 cut(s)	205, 1902
BssNI	GRCGYC	2 cut(s)	189, 378
Bst2UI	CCWGG	4 cut(s)	119, 588, 1318, 1940
Bst4CI	ACNGT	8 cut(s)	196, 206, 233, 283, 550, 1129, 1510, 1660
Bst6I	CTCTTC	2 cut(s)	1238, 1616
BstACI	GRCGYC	2 cut(s)	189, 378
BstC8I	GCNNGC	3 cut(s)	366, 1569, 1704
BstDEI	CTNAG	6 cut(s)	35, 61, 392, 770, 1290, 1821
BstDSI	CCRYGG	1 cut(s)	205
BstEII	GGTNACC	1 cut(s)	1510
BstENI	CCTNNNNNAGG	1 cut(s)	1958
BstF5I	GGATG	2 cut(s)	1368, 1845
BstH2I	RGCGCY	1 cut(s)	381
BstHHI	GCGC	4 cut(s)	242, 380, 688, 1721
BstMAI	GTCTC	2 cut(s)	107, 602
BstMCI	CGRYCG	2 cut(s)	205, 1908
BstMWI	GCNNNNNNNGC	6 cut(s)	23, 207, 397, 1346, 1817, 1925
BstNI	CCWGG	4 cut(s)	119, 588, 1318, 1940
BstPI	GGTNACC	1 cut(s)	1510
BstSCI	CCNGG	5 cut(s)	117, 586, 1316, 1401, 1938
BstSLI	GKGCMC	1 cut(s)	19
BstV1I	GCAGC	5 cut(s)	384, 773, 1226, 1336, 1718
BstV2I	GAAGAC	3 cut(s)	192, 208, 1043
BstX2I	RGATCY	2 cut(s)	817, 1840
BstYI	RGATCY	2 cut(s)	817, 1840
Bsu36I	CCTNAGG	1 cut(s)	770
BsuI	GTATCC	2 cut(s)	1702, 1794
BsuRI	GGCC	7 cut(s)	122, 326, 336, 368, 1811, 1855, 1953
BtgI	CCRYGG	1 cut(s)	205
BtgZI	GCGATG	1 cut(s)	1575
BtrI	CACGTC	3 cut(s)	175, 313, 1049
BtsCI	GGATG	2 cut(s)	1368, 1845
BtsIMutI	CAGTG	3 cut(s)	546, 1685, 1954
Cac8I	GCNNGC	3 cut(s)	366, 1569, 1704
CaiI	CAGNNNCTG	3 cut(s)	148, 587, 1220
CciI	TCATGA	2 cut(s)	1096, 1323
CfoI	GCGC	4 cut(s)	242, 380, 688, 1721
Cfr10I	RCCGGY	2 cut(s)	151, 991
Cfr13I	GGNCC	1 cut(s)	366
CseI	GACGC	1 cut(s)	1689
Csp6I	GTAC	6 cut(s)	87, 894, 974, 1249, 1366, 1527
CspAI	ACCGGT	1 cut(s)	991
CviQI	GTAC	6 cut(s)	87, 894, 974, 1249, 1366, 1527
DdeI	CTNAG	6 cut(s)	35, 61, 392, 770, 1290, 1821
DinI	GGCGCC	1 cut(s)	379
DrdI	GACNNNNNNGTC	1 cut(s)	194
DriI	GACNNNNNGTC	1 cut(s)	658
DseDI	GACNNNNNNGTC	1 cut(s)	194
EaeI	YGGCCR	1 cut(s)	1809
Eam1104I	CTCTTC	2 cut(s)	1238, 1616
Eam1105I	GACNNNNNGTC	1 cut(s)	658
EarI	CTCTTC	2 cut(s)	1238, 1616
Ecl136II	GAGCTC	1 cut(s)	1231
Eco147I	AGGCCT	1 cut(s)	326
Eco24I	GRGCYC	2 cut(s)	857, 1233
Eco32I	GATATC	1 cut(s)	1408
Eco53kI	GAGCTC	1 cut(s)	1231
Eco57I	CTGAAG	4 cut(s)	35, 1242, 1426, 1671
Eco81I	CCTNAGG	1 cut(s)	770
Eco91I	GGTNACC	1 cut(s)	1510
EcoICRI	GAGCTC	1 cut(s)	1231
EcoNI	CCTNNNNNAGG	1 cut(s)	1958
EcoO65I	GGTNACC	1 cut(s)	1510
EcoRI	GAATTC	1 cut(s)	577
EcoRII	CCWGG	4 cut(s)	117, 586, 1316, 1938
EcoRV	GATATC	1 cut(s)	1408
EcoT38I	GRGCYC	2 cut(s)	857, 1233
EgeI	GGCGCC	1 cut(s)	379
EheI	GGCGCC	1 cut(s)	379
Esp3I	CGTCTC	1 cut(s)	107
FalI	AAGNNNNNCTT	6 cut(s)	1251, 1283, 1695, 1727, 1908, 1940
FauI	CCCGC	3 cut(s)	357, 398, 1921
FauNDI	CATATG	2 cut(s)	1006, 1531
FblI	GTMKAC	1 cut(s)	1798
Fnu4HI	GCNGC	5 cut(s)	398, 787, 1215, 1350, 1707
FokI	GGATG	2 cut(s)	1355, 1832
FriOI	GRGCYC	2 cut(s)	857, 1233
Fsp4HI	GCNGC	5 cut(s)	398, 787, 1215, 1350, 1707
FspBI	CTAG	3 cut(s)	930, 1151, 1353
GlaI	GCGC	4 cut(s)	241, 379, 687, 1720
GluI	GCNGC	5 cut(s)	398, 787, 1215, 1350, 1707
GsuI	CTGGAG	2 cut(s)	1316, 1530
HaeII	RGCGCY	1 cut(s)	381
HaeIII	GGCC	7 cut(s)	122, 326, 336, 368, 1811, 1855, 1953
HapII	CCGG	4 cut(s)	152, 182, 992, 1402
HgaI	GACGC	1 cut(s)	1689
HhaI	GCGC	4 cut(s)	242, 380, 688, 1721
Hin1I	GRCGYC	2 cut(s)	189, 378
Hin6I	GCGC	4 cut(s)	240, 378, 686, 1719
HinP1I	GCGC	4 cut(s)	240, 378, 686, 1719
HincII	GTYRAC	2 cut(s)	253, 652
HindII	GTYRAC	2 cut(s)	253, 652
HindIII	AAGCTT	2 cut(s)	5, 1744
HinfI	GANTC	9 cut(s)	97, 157, 470, 481, 676, 926, 1035, 1043, 1727
HpaII	CCGG	4 cut(s)	152, 182, 992, 1402
HphI	GGTGA	8 cut(s)	166, 184, 295, 328, 602, 803, 877, 1505
Hpy166II	GTNNAC	8 cut(s)	57, 253, 279, 652, 885, 1265, 1399, 1799
Hpy188I	TCNGA	7 cut(s)	144, 310, 852, 1042, 1293, 1459, 1773
Hpy8I	GTNNAC	8 cut(s)	57, 253, 279, 652, 885, 1265, 1399, 1799
Hpy99I	CGWCG	4 cut(s)	176, 200, 277, 361
HpyCH4III	ACNGT	8 cut(s)	196, 206, 233, 283, 550, 1129, 1510, 1660
HpyCH4IV	ACGT	8 cut(s)	174, 189, 213, 275, 312, 896, 1048, 1307
HpyCH4V	TGCA	5 cut(s)	108, 1173, 1214, 1282, 1702
HpyF10VI	GCNNNNNNNGC	6 cut(s)	23, 207, 397, 1346, 1817, 1925
HpyF3I	CTNAG	6 cut(s)	35, 61, 392, 770, 1290, 1821
HpySE526I	ACGT	8 cut(s)	174, 189, 213, 275, 312, 896, 1048, 1307
Hsp92I	GRCGYC	2 cut(s)	189, 378
HspAI	GCGC	4 cut(s)	240, 378, 686, 1719
KasI	GGCGCC	1 cut(s)	377
LguI	GCTCTTC	1 cut(s)	1238
LmnI	GCTCC	6 cut(s)	628, 640, 646, 852, 1335, 1549
Lsp1109I	GCAGC	5 cut(s)	384, 773, 1226, 1336, 1718
LweI	GCATC	1 cut(s)	1336
MaeI	CTAG	3 cut(s)	930, 1151, 1353
MaeII	ACGT	8 cut(s)	174, 189, 213, 275, 312, 896, 1048, 1307
MaeIII	GTNAC	9 cut(s)	177, 190, 544, 806, 1129, 1308, 1510, 1660, 1884
MflI	RGATCY	2 cut(s)	817, 1840
MhlI	GDGCHC	5 cut(s)	19, 559, 857, 1233, 1380
MlsI	TGGCCA	1 cut(s)	1811
MluCI	AATT	6 cut(s)	82, 577, 655, 1145, 1199, 1869
MluNI	TGGCCA	1 cut(s)	1811
Mly113I	GGCGCC	1 cut(s)	378
MlyI	GAGTC	4 cut(s)	91, 479, 490, 1721
Mox20I	TGGCCA	1 cut(s)	1811
MroXI	GAANNNNTTC	1 cut(s)	1453
MscI	TGGCCA	1 cut(s)	1811
MseI	TTAA	5 cut(s)	519, 1116, 1238, 1269, 1713
MslI	CAYNNNNRTG	2 cut(s)	1281, 1736
Msp20I	TGGCCA	1 cut(s)	1811
MspI	CCGG	4 cut(s)	152, 182, 992, 1402
MspR9I	CCNGG	5 cut(s)	119, 588, 1318, 1403, 1940
MvaI	CCWGG	4 cut(s)	119, 588, 1318, 1940
MwoI	GCNNNNNNNGC	6 cut(s)	23, 207, 397, 1346, 1817, 1925
NarI	GGCGCC	1 cut(s)	378
NciI	CCSGG	1 cut(s)	1403
NdeI	CATATG	2 cut(s)	1006, 1531
NlaIV	GGNNCC	6 cut(s)	18, 379, 854, 1331, 1438, 1545
NmuCI	GTSAC	5 cut(s)	190, 544, 806, 1308, 1884
PagI	TCATGA	2 cut(s)	1096, 1323
PceI	AGGCCT	1 cut(s)	326
PciSI	GCTCTTC	1 cut(s)	1238
PcsI	WCGNNNNNNNCGW	1 cut(s)	287
PdmI	GAANNNNTTC	1 cut(s)	1453
PfeI	GAWTC	5 cut(s)	157, 676, 926, 1035, 1043
PfoI	TCCNGGA	1 cut(s)	1316
PinAI	ACCGGT	1 cut(s)	991
PkrI	GCNGC	5 cut(s)	399, 788, 1216, 1351, 1708
PleI	GAGTC	4 cut(s)	91, 478, 489, 1721
PluTI	GGCGCC	1 cut(s)	381
PpsI	GAGTC	4 cut(s)	91, 478, 489, 1721
Psp124BI	GAGCTC	1 cut(s)	1233
Psp6I	CCWGG	4 cut(s)	117, 586, 1316, 1938
PspEI	GGTNACC	1 cut(s)	1510
PspGI	CCWGG	4 cut(s)	117, 586, 1316, 1938
PspN4I	GGNNCC	6 cut(s)	18, 379, 854, 1331, 1438, 1545
PspPI	GGNCC	1 cut(s)	366
PstNI	CAGNNNCTG	3 cut(s)	148, 587, 1220
PsuI	RGATCY	2 cut(s)	817, 1840
RsaI	GTAC	6 cut(s)	88, 895, 975, 1250, 1367, 1528
RsaNI	GTAC	6 cut(s)	87, 894, 974, 1249, 1366, 1527
RseI	CAYNNNNRTG	2 cut(s)	1281, 1736
SacI	GAGCTC	1 cut(s)	1233
SapI	GCTCTTC	1 cut(s)	1238
SaqAI	TTAA	5 cut(s)	519, 1116, 1238, 1269, 1713
SatI	GCNGC	5 cut(s)	398, 787, 1215, 1350, 1707
Sau96I	GGNCC	1 cut(s)	366
SchI	GAGTC	4 cut(s)	91, 479, 490, 1721
ScrFI	CCNGG	5 cut(s)	119, 588, 1318, 1403, 1940
SduI	GDGCHC	5 cut(s)	19, 559, 857, 1233, 1380
SfaNI	GCATC	1 cut(s)	1336
SfoI	GGCGCC	1 cut(s)	379
SmiMI	CAYNNNNRTG	2 cut(s)	1281, 1736
SmlI	CTYRAG	3 cut(s)	1361, 1555, 1802
SmoI	CTYRAG	3 cut(s)	1361, 1555, 1802
Sse9I	AATT	6 cut(s)	82, 577, 655, 1145, 1199, 1869
SseBI	AGGCCT	1 cut(s)	326
SsiI	CCGC	4 cut(s)	364, 405, 789, 1928
SspDI	GGCGCC	1 cut(s)	377
SspMI	CTAG	3 cut(s)	930, 1151, 1353
SstI	GAGCTC	1 cut(s)	1233
StuI	AGGCCT	1 cut(s)	326
StyD4I	CCNGG	5 cut(s)	117, 586, 1316, 1401, 1938
TaaI	ACNGT	8 cut(s)	196, 206, 233, 283, 550, 1129, 1510, 1660
TaiI	ACGT	8 cut(s)	177, 192, 216, 278, 315, 899, 1051, 1310
TaqI	TCGA	6 cut(s)	171, 290, 356, 413, 1614, 1908
TaqII	GACCGA	1 cut(s)	1894
TasI	AATT	6 cut(s)	82, 577, 655, 1145, 1199, 1869
TatI	WGTACW	2 cut(s)	973, 1365
TfiI	GAWTC	5 cut(s)	157, 676, 926, 1035, 1043
Tru1I	TTAA	5 cut(s)	519, 1116, 1238, 1269, 1713
Tru9I	TTAA	5 cut(s)	519, 1116, 1238, 1269, 1713
TscAI	CASTG	3 cut(s)	553, 1692, 1954
TseFI	GTSAC	5 cut(s)	190, 544, 806, 1308, 1884
TseI	GCWGC	5 cut(s)	397, 786, 1214, 1349, 1706
Tsp45I	GTSAC	5 cut(s)	190, 544, 806, 1308, 1884
TspDTI	ATGAA	8 cut(s)	17, 95, 208, 1023, 1085, 1169, 1851, 1877
TspGWI	ACGGA	1 cut(s)	104
TspRI	CASTG	3 cut(s)	553, 1692, 1954
XagI	CCTNNNNNAGG	1 cut(s)	1958
XapI	RAATTY	2 cut(s)	577, 1145
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1946
XmiI	GTMKAC	1 cut(s)	1798
XmnI	GAANNNNTTC	1 cut(s)	1453
XspI	CTAG	3 cut(s)	930, 1151, 1353
ZraI	GACGTC	1 cut(s)	190

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.