Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0010392

Physical Location & Seq

Genomic Coordinates Forward (+)

21699861 .. 21705817

Gene Structure 5957 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1183700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGAAGCTTCAATGGAATCCAATACCAATACTTTTACACCTTTTTCTCCTTCAAATTACCCTTTCCATAGCTTTCTCCCCAAGCCCCATGAACTGTACGGACACAACTCGCCTGTGCACCTCCTTTTTGGCCTTTAAGCCGGAACCCAATGAGACTCTGCCGGTGATTCAGAGCCTGTTCGACGTATTGCCGGAAGATGTGACCGTTGAGGGCGGCGACGGGCGGGGCTACGTGTTTGTGAAGAAGAACTGTTCTTGTGCGGAGGGGATCAAGAGTTACTTAACCAACACAACGTTTACTGTGAAATCTGCAGATGGGAATGTTTATGACATGGTTATGGAGGCCTATGGTGGGCTGACTTTTCTGCCTAATACCACTAGGCGGGCCGGGTACGGCGCAGTTGTGTCGTTGAGGCTGATGTGTGGGTGTTCGAGTGGGTTGTGGAACTATCTGATGAGTTATGTGATGAGGGATGGGGATAGCATTGAGTCTCTGGCTAGCCGGTTCGGGGTTAGCATGGATAGCATTGAGAAGGTGAATGGGATTAGTGATCCTGATAATGTGACTGTTGGCCATCTGTATTACATTCCTTTGAATTCAGTTCCTGGTGAGCCGTATCCTTTGGAGACGATTTCTCCTGCTCCTGTTCCTTCTCCATCCAATGCCAGTGTTTCAGCAAATGAAGAGAATCATAAGGCGCATCTGCCATATTTATGGATTGTAGGGAGTTTAGGGATCATTCTTGTTGTGATCGTATTAGGCATAGTTTTATATGTTTGCCTGAGGTCATCAAGCTGCTTTACTGAAGCACAAAGAAGTAGTTCAAAAGATCCTGATGGTCAAATTAGGTTTCATGTTCTTCGGAAGCCAAGTTTTTGTTGTGCTTCGGGTGGGTACATGTGTTGCACCTCATCAGATTGGAAGCAAACTAATGGAGATCCTAGCAGTCAGCAGGCAACTATCCCCAAAGCTATTGGCAGTCATGTACTTGATGTGGAGAAGCCTGTCATTTTCACATATGAAGATATTTTTTCCTCAACAGATGGGTTTTCTGATTCGCGTCTTCTGGGCCATGGAACATATGGTTCCGTGTATTATGGCCTTCTCCGTGAGCAGGAAGTTGCTATTAAAAGAATGACCGCTACAAAAACTAAAGAGTTTCTGGCAGAAATAAAAGTTCTATGCAAGGTTCATCATTCAAATCTGGTAGAATTGATTGGTTATACAGCAAATGACGAGGAGCTCTTCCTTCTATATGAATATGCCCAAAAAGGTTCACTTAAAAGCCATTTGCATGATCCTCAGAACAAAGGTCATACATCACTTTCCTGGGTCATGAGGGTCCAGATTGCACTTGATGCTGCTAGAGGTCTCGAGTACATCCATGAGCACACTAAAACTCATTATGTCCACCGCGATATCAAGACAAGCAACATCTTGCTTGATGGTTCCTTCAGGGCAAAGATTTCAGACTTTGGGTTGGCAAGAATTTTTGGTAAAACAAGTGATGGAGAAGCTACCGTAACCAAAGTTGTTGGTACATATGGTTATCTGGCCCCAGAATACTTGAGTGACGGTCGTGCTACTACAAAAAGTGATATTTATGCTTTTGGAGTTGTTCTTTTTGAGCTTATATCGGGGAAGGAGGCCGTTATACGAACTGAAGGCACAGCCACAAAAAATTCTGAGAGACGTTCACTGGTGTCAATTATGCAAACAGCTCTAAGGACTTCACCAGACTCCACGAGCATGTCAAACTTGAAAGATTACGTTGATCCAAATATGATGGACTTGTATCCTCATGATTGCCTGTTCAAGGTGGCCATGATAGCAAAGCAATGTGTAGATGAGGACCCCATCCTACGGCCTGACATGAAAGGAGTTGTGATTTCTCTATCACAGATCCTCCTATCCTCAGTGGAGTGGGAAGCTACTCTTGCAGGGAACAGCCAGGTATTCAGTGGCCTTGTTCAGGGAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023051 GO:0023052 GO:0023056 GO:0031347 GO:0031348 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1901419 GO:1901421 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

661

Amino Acids

72.64

Weight (kDa)

5.89

Isoelectric Point (pI)

39.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM3_LYK4_5	PF23473	150 - 187	1.9e-06	LYK4/5 LysM3 domain
LysM	PF01476	156 - 191	2.7e-06	LysM domain
Pkinase	PF00069	351 - 624	2.7e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	354 - 629	1.3e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51940
fragaria_vesca	FvH4_6g32430 FvH4_6g32430
malus_domestica	MD09G1202500.v1.1 MD17G1183700.v1.1
prunus_persica	Prupe.3G058700_v2.0.a1 Prupe.3G058700_v2.0.a1
pyrus_communis	pycom09g11950 pycom17g19310
rosa_chinensis	RchiOBHm_Chr2g0140581
rosa_laevigata	RLG00000019879
rosa_multiflora	Rmu_ssc0000213.1_g000121
rosa_roxburghii	Rroxscaffold_153G00436620 Rroxscaffold_2G00104660
rosa_rugosa	Rorug02G0363700
rosa_samantha	Rh2BG424600 Rh2BG424800 Rh2CG401300 Rh2DG434700
rosa_wichuraiana	Rw2G033960 Rw2G033980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	1060, 1416
AciI	CCGC	6 cut(s)	213, 223, 260, 382, 1140, 1414
AclI	AACGTT	1 cut(s)	293
AclWI	GGATC	8 cut(s)	275, 545, 743, 824, 932, 1292, 1769, 1897
AcoI	YGGCCR	2 cut(s)	571, 1821
AcsI	RAATTY	3 cut(s)	595, 1488, 1681
AcuI	CTGAAG	3 cut(s)	825, 1438, 1683
AfaI	GTAC	6 cut(s)	97, 392, 896, 987, 1379, 1540
AfiI	CCNNNNNNNGG	7 cut(s)	351, 381, 508, 1114, 1816, 1863, 1972
AflIII	ACRYGT	2 cut(s)	231, 897
AgsI	TTSAA	7 cut(s)	11, 53, 595, 825, 1200, 1762, 1816
AjnI	CCWGG	3 cut(s)	604, 1328, 1950
AluBI	AGCT	9 cut(s)	7, 71, 795, 971, 1243, 1517, 1630, 1721, 1931
AluI	AGCT	9 cut(s)	7, 71, 795, 971, 1243, 1517, 1630, 1721, 1931
Alw21I	GWGCWC	3 cut(s)	119, 1245, 1392
Alw26I	GTCTC	5 cut(s)	146, 495, 620, 1376, 1684
Alw44I	GTGCAC	1 cut(s)	115
AlwI	GGATC	8 cut(s)	275, 545, 743, 824, 932, 1292, 1769, 1897
AlwNI	CAGNNNCTG	2 cut(s)	175, 605
Ama87I	CYCGRG	1 cut(s)	1373
ApaLI	GTGCAC	1 cut(s)	115
ApeKI	GCWGC	2 cut(s)	795, 1361
ApoI	RAATTY	3 cut(s)	595, 1488, 1681
Asp700I	GAANNNNTTC	1 cut(s)	820
AspLEI	GCGC	2 cut(s)	398, 700
AspS9I	GGNCC	5 cut(s)	384, 1069, 1342, 1555, 1852
AsuC2I	CCSGG	1 cut(s)	388
AsuHPI	GGTGA	4 cut(s)	175, 547, 620, 1725
AsuNHI	GCTAGC	1 cut(s)	497
AvaI	CYCGRG	1 cut(s)	1373
AvaII	GGWCC	2 cut(s)	1342, 1852
AxyI	CCTNAGG	1 cut(s)	782
BaeGI	GKGCMC	1 cut(s)	119
BaeI	ACNNNNGTAYC	2 cut(s)	886, 919
BalI	TGGCCA	2 cut(s)	573, 1823
BanII	GRGCYC	1 cut(s)	1245
BauI	CACGAG	1 cut(s)	1744
BbsI	GAAGAC	1 cut(s)	1055
Bbv12I	GWGCWC	3 cut(s)	119, 1245, 1392
BbvI	GCAGC	2 cut(s)	782, 1348
BceAI	ACGGC	4 cut(s)	409, 598, 1634, 1880
BcgI	CGANNNNNNTGC	2 cut(s)	387, 421
BciT130I	CCWGG	3 cut(s)	606, 1330, 1952
BciVI	GTATCC	2 cut(s)	627, 1806
BcnI	CCSGG	1 cut(s)	388
BcoDI	GTCTC	5 cut(s)	146, 495, 620, 1376, 1684
BfaI	CTAG	4 cut(s)	378, 498, 942, 1365
BfmI	CTRYAG	1 cut(s)	309
BfuI	GTATCC	2 cut(s)	627, 1806
BisI	GCNGC	3 cut(s)	214, 796, 1362
BlsI	GCNGC	3 cut(s)	215, 797, 1363
Bme1390I	CCNGG	4 cut(s)	388, 606, 1330, 1952
Bme18I	GGWCC	2 cut(s)	1342, 1852
BmeT110I	CYCGRG	1 cut(s)	1373
BmgT120I	GGNCC	5 cut(s)	384, 1069, 1342, 1555, 1852
BmiI	GGNNCC	6 cut(s)	144, 1087, 1343, 1450, 1557, 1854
BmrFI	CCNGG	4 cut(s)	388, 606, 1330, 1952
BmsI	GCATC	2 cut(s)	709, 1348
BmtI	GCTAGC	1 cut(s)	501
BpiI	GAAGAC	1 cut(s)	1055
BpuEI	CTTGAG	1 cut(s)	1588
BpuMI	CCSGG	1 cut(s)	388
BsaAI	YACGTR	1 cut(s)	232
BsaI	GGTCTC	1 cut(s)	1376
BsaJI	CCNNGG	2 cut(s)	1072, 1329
BsaXI	ACNNNNNCTCC	4 cut(s)	619, 649, 1890, 1920
Bsc4I	CCNNNNNNNGG	7 cut(s)	351, 381, 508, 1114, 1816, 1863, 1972
Bse118I	RCCGGY	2 cut(s)	160, 501
Bse1I	ACTGG	2 cut(s)	666, 1704
Bse21I	CCTNAGG	1 cut(s)	782
Bse3DI	GCAATG	1 cut(s)	1844
BseBI	CCWGG	3 cut(s)	606, 1330, 1952
BseDI	CCNNGG	2 cut(s)	1072, 1329
BseGI	GGATG	4 cut(s)	478, 656, 1380, 1857
BseLI	CCNNNNNNNGG	7 cut(s)	351, 381, 508, 1114, 1816, 1863, 1972
BseMI	GCAATG	1 cut(s)	1844
BseMII	CTCAG	4 cut(s)	773, 1316, 1677, 1929
BseNI	ACTGG	2 cut(s)	666, 1704
BseRI	GAGGAG	1 cut(s)	1253
BseSI	GKGCMC	1 cut(s)	119
BseXI	GCAGC	2 cut(s)	782, 1348
Bsh1236I	CGCG	2 cut(s)	1060, 1416
Bsh1285I	CGRYCG	1 cut(s)	1579
BsiEI	CGRYCG	1 cut(s)	1579
BsiHKAI	GWGCWC	3 cut(s)	119, 1245, 1392
BsiHKCI	CYCGRG	1 cut(s)	1373
BsiSI	CCGG	5 cut(s)	140, 161, 191, 387, 502
BslI	CCNNNNNNNGG	7 cut(s)	351, 381, 508, 1114, 1816, 1863, 1972
BsmAI	GTCTC	5 cut(s)	146, 495, 620, 1376, 1684
BsmBI	CGTCTC	2 cut(s)	620, 1684
Bso31I	GGTCTC	1 cut(s)	1376
BsoBI	CYCGRG	1 cut(s)	1373
Bsp1286I	GDGCHC	3 cut(s)	119, 1245, 1392
Bsp143I	GATC	9 cut(s)	267, 550, 735, 750, 829, 937, 1297, 1774, 1902
Bsp19I	CCATGG	1 cut(s)	1072
BspACI	CCGC	6 cut(s)	213, 223, 260, 382, 1140, 1414
BspCNI	CTCAG	4 cut(s)	774, 1315, 1678, 1928
BspFNI	CGCG	2 cut(s)	1060, 1416
BspHI	TCATGA	2 cut(s)	1335, 1801
BspLI	GGNNCC	6 cut(s)	144, 1087, 1343, 1450, 1557, 1854
BspMAI	CTGCAG	1 cut(s)	313
BspOI	GCTAGC	1 cut(s)	501
BspPI	GGATC	8 cut(s)	275, 545, 743, 824, 932, 1292, 1769, 1897
BspQI	GCTCTTC	1 cut(s)	1250
BspTNI	GGTCTC	1 cut(s)	1376
BsrDI	GCAATG	1 cut(s)	1844
BsrFI	RCCGGY	2 cut(s)	160, 501
BsrI	ACTGG	2 cut(s)	666, 1704
BssAI	RCCGGY	2 cut(s)	160, 501
BssECI	CCNNGG	2 cut(s)	1072, 1329
BssMI	GATC	9 cut(s)	267, 550, 735, 750, 829, 937, 1297, 1774, 1902
BssSI	CACGAG	1 cut(s)	1744
BssT1I	CCWWGG	1 cut(s)	1072
Bst2BI	CACGAG	1 cut(s)	1744
Bst2UI	CCWGG	3 cut(s)	606, 1330, 1952
Bst4CI	ACNGT	7 cut(s)	95, 205, 251, 301, 568, 1522, 1577
Bst6I	CTCTTC	2 cut(s)	678, 1250
BstAPI	GCANNNNNTGC	1 cut(s)	1358
BstBAI	YACGTR	1 cut(s)	232
BstC8I	GCNNGC	3 cut(s)	384, 499, 954
BstDEI	CTNAG	5 cut(s)	782, 1302, 1686, 1724, 1915
BstDSI	CCRYGG	1 cut(s)	1072
BstENI	CCTNNNNNAGG	2 cut(s)	1814, 1970
BstF5I	GGATG	4 cut(s)	478, 656, 1380, 1857
BstFNI	CGCG	2 cut(s)	1060, 1416
BstHHI	GCGC	2 cut(s)	398, 700
BstKTI	GATC	9 cut(s)	270, 553, 738, 753, 832, 940, 1300, 1777, 1905
BstMAI	GTCTC	5 cut(s)	146, 495, 620, 1376, 1684
BstMBI	GATC	9 cut(s)	267, 550, 735, 750, 829, 937, 1297, 1774, 1902
BstMCI	CGRYCG	1 cut(s)	1579
BstMWI	GCNNNNNNNGC	4 cut(s)	522, 1358, 1829, 1937
BstNI	CCWGG	3 cut(s)	606, 1330, 1952
BstNSI	RCATGY	2 cut(s)	901, 1753
BstSCI	CCNGG	4 cut(s)	386, 604, 1328, 1950
BstSFI	CTRYAG	1 cut(s)	309
BstSLI	GKGCMC	1 cut(s)	119
BstUI	CGCG	2 cut(s)	1060, 1416
BstV1I	GCAGC	2 cut(s)	782, 1348
BstV2I	GAAGAC	1 cut(s)	1055
BstX2I	RGATCY	3 cut(s)	829, 937, 1902
BstXI	CCANNNNNNTGG	1 cut(s)	714
BstYI	RGATCY	3 cut(s)	829, 937, 1902
Bsu36I	CCTNAGG	1 cut(s)	782
BsuI	GTATCC	2 cut(s)	627, 1806
BtgI	CCRYGG	1 cut(s)	1072
BtsCI	GGATG	4 cut(s)	478, 656, 1380, 1857
BtsIMutI	CAGTG	4 cut(s)	673, 1697, 1923, 1966
Cac8I	GCNNGC	3 cut(s)	384, 499, 954
CaiI	CAGNNNCTG	2 cut(s)	175, 605
CciI	TCATGA	2 cut(s)	1335, 1801
CfoI	GCGC	2 cut(s)	398, 700
Cfr10I	RCCGGY	2 cut(s)	160, 501
Cfr13I	GGNCC	5 cut(s)	384, 1069, 1342, 1555, 1852
CseI	GACGC	1 cut(s)	1049
Csp6I	GTAC	6 cut(s)	96, 391, 895, 986, 1378, 1539
CviQI	GTAC	6 cut(s)	96, 391, 895, 986, 1378, 1539
DdeI	CTNAG	5 cut(s)	782, 1302, 1686, 1724, 1915
DpnI	GATC	9 cut(s)	269, 552, 737, 752, 831, 939, 1299, 1776, 1904
DpnII	GATC	9 cut(s)	267, 550, 735, 750, 829, 937, 1297, 1774, 1902
EaeI	YGGCCR	2 cut(s)	571, 1821
Eam1104I	CTCTTC	2 cut(s)	678, 1250
EarI	CTCTTC	2 cut(s)	678, 1250
Ecl136II	GAGCTC	1 cut(s)	1243
Eco130I	CCWWGG	1 cut(s)	1072
Eco147I	AGGCCT	1 cut(s)	344
Eco24I	GRGCYC	1 cut(s)	1245
Eco31I	GGTCTC	1 cut(s)	1376
Eco32I	GATATC	1 cut(s)	1420
Eco47I	GGWCC	2 cut(s)	1342, 1852
Eco53kI	GAGCTC	1 cut(s)	1243
Eco57I	CTGAAG	3 cut(s)	825, 1438, 1683
Eco81I	CCTNAGG	1 cut(s)	782
Eco88I	CYCGRG	1 cut(s)	1373
EcoICRI	GAGCTC	1 cut(s)	1243
EcoNI	CCTNNNNNAGG	2 cut(s)	1814, 1970
EcoO109I	RGGNCCY	1 cut(s)	1852
EcoRI	GAATTC	1 cut(s)	595
EcoRII	CCWGG	3 cut(s)	604, 1328, 1950
EcoRV	GATATC	1 cut(s)	1420
EcoT14I	CCWWGG	1 cut(s)	1072
EcoT38I	GRGCYC	1 cut(s)	1245
ErhI	CCWWGG	1 cut(s)	1072
Esp3I	CGTCTC	2 cut(s)	620, 1684
FalI	AAGNNNNNCTT	6 cut(s)	263, 295, 1263, 1295, 1920, 1952
FauI	CCCGC	2 cut(s)	216, 375
FauNDI	CATATG	3 cut(s)	1018, 1081, 1543
Fnu4HI	GCNGC	3 cut(s)	214, 796, 1362
FokI	GGATG	4 cut(s)	485, 643, 1367, 1844
FriOI	GRGCYC	1 cut(s)	1245
Fsp4HI	GCNGC	3 cut(s)	214, 796, 1362
FspBI	CTAG	4 cut(s)	378, 498, 942, 1365
GlaI	GCGC	2 cut(s)	397, 699
GluI	GCNGC	3 cut(s)	214, 796, 1362
HapII	CCGG	5 cut(s)	140, 161, 191, 387, 502
HgaI	GACGC	1 cut(s)	1049
HhaI	GCGC	2 cut(s)	398, 700
Hin6I	GCGC	2 cut(s)	396, 698
HinP1I	GCGC	2 cut(s)	396, 698
HindIII	AAGCTT	1 cut(s)	5
HinfI	GANTC	7 cut(s)	16, 154, 166, 488, 688, 1055, 1739
HpaII	CCGG	5 cut(s)	140, 161, 191, 387, 502
HphI	GGTGA	4 cut(s)	175, 547, 620, 1725
Hpy166II	GTNNAC	5 cut(s)	117, 297, 1277, 1411, 1697
Hpy188I	TCNGA	8 cut(s)	171, 453, 864, 916, 1054, 1305, 1471, 1687
Hpy188III	TCNNGA	8 cut(s)	271, 554, 833, 1336, 1345, 1373, 1423, 1802
Hpy8I	GTNNAC	5 cut(s)	117, 297, 1277, 1411, 1697
Hpy99I	CGWCG	2 cut(s)	185, 221
HpyAV	CCTTC	8 cut(s)	59, 526, 660, 1112, 1259, 1462, 1636, 1658
HpyCH4III	ACNGT	7 cut(s)	95, 205, 251, 301, 568, 1522, 1577
HpyCH4IV	ACGT	5 cut(s)	183, 231, 293, 1693, 1770
HpyCH4V	TGCA	8 cut(s)	117, 311, 906, 1185, 1294, 1352, 1714, 1940
HpyF10VI	GCNNNNNNNGC	4 cut(s)	522, 1358, 1829, 1937
HpyF3I	CTNAG	5 cut(s)	782, 1302, 1686, 1724, 1915
HpySE526I	ACGT	5 cut(s)	183, 231, 293, 1693, 1770
HspAI	GCGC	2 cut(s)	396, 698
Kzo9I	GATC	9 cut(s)	267, 550, 735, 750, 829, 937, 1297, 1774, 1902
LguI	GCTCTTC	1 cut(s)	1250
LmnI	GCTCC	2 cut(s)	646, 1240
Lsp1109I	GCAGC	2 cut(s)	782, 1348
LweI	GCATC	2 cut(s)	709, 1348
MaeI	CTAG	4 cut(s)	378, 498, 942, 1365
MaeII	ACGT	5 cut(s)	183, 231, 293, 1693, 1770
MaeIII	GTNAC	5 cut(s)	199, 275, 562, 1522, 1571
MalI	GATC	9 cut(s)	269, 552, 737, 752, 831, 939, 1299, 1776, 1904
MboI	GATC	9 cut(s)	267, 550, 735, 750, 829, 937, 1297, 1774, 1902
MboII	GAAGA	8 cut(s)	206, 253, 256, 695, 851, 1034, 1055, 1237
MflI	RGATCY	3 cut(s)	829, 937, 1902
MhlI	GDGCHC	3 cut(s)	119, 1245, 1392
MlsI	TGGCCA	2 cut(s)	573, 1823
MluCI	AATT	7 cut(s)	54, 595, 843, 1211, 1488, 1681, 1707
MluNI	TGGCCA	2 cut(s)	573, 1823
MlyI	GAGTC	3 cut(s)	148, 497, 1733
Mox20I	TGGCCA	2 cut(s)	573, 1823
MroXI	GAANNNNTTC	1 cut(s)	820
MscI	TGGCCA	2 cut(s)	573, 1823
MseI	TTAA	4 cut(s)	135, 281, 1128, 1281
MslI	CAYNNNNRTG	4 cut(s)	335, 712, 1293, 1748
Msp20I	TGGCCA	2 cut(s)	573, 1823
MspI	CCGG	5 cut(s)	140, 161, 191, 387, 502
MspR9I	CCNGG	4 cut(s)	388, 606, 1330, 1952
MvaI	CCWGG	3 cut(s)	606, 1330, 1952
MvnI	CGCG	2 cut(s)	1060, 1416
MwoI	GCNNNNNNNGC	4 cut(s)	522, 1358, 1829, 1937
NciI	CCSGG	1 cut(s)	388
NcoI	CCATGG	1 cut(s)	1072
NdeI	CATATG	3 cut(s)	1018, 1081, 1543
NdeII	GATC	9 cut(s)	267, 550, 735, 750, 829, 937, 1297, 1774, 1902
NheI	GCTAGC	1 cut(s)	497
NlaIV	GGNNCC	6 cut(s)	144, 1087, 1343, 1450, 1557, 1854
NmuCI	GTSAC	3 cut(s)	199, 562, 1571
NspI	RCATGY	2 cut(s)	901, 1753
PaeR7I	CTCGAG	1 cut(s)	1373
PagI	TCATGA	2 cut(s)	1335, 1801
PceI	AGGCCT	1 cut(s)	344
PciI	ACATGT	1 cut(s)	897
PciSI	GCTCTTC	1 cut(s)	1250
PdmI	GAANNNNTTC	1 cut(s)	820
PfeI	GAWTC	4 cut(s)	16, 166, 688, 1055
PkrI	GCNGC	3 cut(s)	215, 797, 1363
PleI	GAGTC	3 cut(s)	148, 496, 1733
PpsI	GAGTC	3 cut(s)	148, 496, 1733
Ppu21I	YACGTR	1 cut(s)	232
PpuMI	RGGWCCY	1 cut(s)	1852
PscI	ACATGT	1 cut(s)	897
Psp124BI	GAGCTC	1 cut(s)	1245
Psp1406I	AACGTT	1 cut(s)	293
Psp5II	RGGWCCY	1 cut(s)	1852
Psp6I	CCWGG	3 cut(s)	604, 1328, 1950
PspGI	CCWGG	3 cut(s)	604, 1328, 1950
PspN4I	GGNNCC	6 cut(s)	144, 1087, 1343, 1450, 1557, 1854
PspPI	GGNCC	5 cut(s)	384, 1069, 1342, 1555, 1852
PspPPI	RGGWCCY	1 cut(s)	1852
PstI	CTGCAG	1 cut(s)	313
PstNI	CAGNNNCTG	2 cut(s)	175, 605
PsuI	RGATCY	3 cut(s)	829, 937, 1902
RsaI	GTAC	6 cut(s)	97, 392, 896, 987, 1379, 1540
RsaNI	GTAC	6 cut(s)	96, 391, 895, 986, 1378, 1539
RseI	CAYNNNNRTG	4 cut(s)	335, 712, 1293, 1748
SacI	GAGCTC	1 cut(s)	1245
SapI	GCTCTTC	1 cut(s)	1250
SaqAI	TTAA	4 cut(s)	135, 281, 1128, 1281
SatI	GCNGC	3 cut(s)	214, 796, 1362
Sau3AI	GATC	9 cut(s)	267, 550, 735, 750, 829, 937, 1297, 1774, 1902
Sau96I	GGNCC	5 cut(s)	384, 1069, 1342, 1555, 1852
SchI	GAGTC	3 cut(s)	148, 497, 1733
ScrFI	CCNGG	4 cut(s)	388, 606, 1330, 1952
SduI	GDGCHC	3 cut(s)	119, 1245, 1392
SfaNI	GCATC	2 cut(s)	709, 1348
SfcI	CTRYAG	1 cut(s)	309
Sfr274I	CTCGAG	1 cut(s)	1373
SinI	GGWCC	2 cut(s)	1342, 1852
SlaI	CTCGAG	1 cut(s)	1373
SmiMI	CAYNNNNRTG	4 cut(s)	335, 712, 1293, 1748
SmlI	CTYRAG	2 cut(s)	1373, 1567
SmoI	CTYRAG	2 cut(s)	1373, 1567
Sse9I	AATT	7 cut(s)	54, 595, 843, 1211, 1488, 1681, 1707
SseBI	AGGCCT	1 cut(s)	344
SsiI	CCGC	6 cut(s)	213, 223, 260, 382, 1140, 1414
SspMI	CTAG	4 cut(s)	378, 498, 942, 1365
SstI	GAGCTC	1 cut(s)	1245
StuI	AGGCCT	1 cut(s)	344
StyD4I	CCNGG	4 cut(s)	386, 604, 1328, 1950
StyI	CCWWGG	1 cut(s)	1072
TaaI	ACNGT	7 cut(s)	95, 205, 251, 301, 568, 1522, 1577
TaiI	ACGT	5 cut(s)	186, 234, 296, 1696, 1773
TaqI	TCGA	3 cut(s)	180, 431, 1374
TasI	AATT	7 cut(s)	54, 595, 843, 1211, 1488, 1681, 1707
TatI	WGTACW	2 cut(s)	985, 1377
TauI	GCSGC	1 cut(s)	216
TfiI	GAWTC	4 cut(s)	16, 166, 688, 1055
Tru1I	TTAA	4 cut(s)	135, 281, 1128, 1281
Tru9I	TTAA	4 cut(s)	135, 281, 1128, 1281
TscAI	CASTG	4 cut(s)	673, 1704, 1923, 1966
TseFI	GTSAC	3 cut(s)	199, 562, 1571
TseI	GCWGC	2 cut(s)	795, 1361
Tsp45I	GTSAC	3 cut(s)	199, 562, 1571
TspDTI	ATGAA	8 cut(s)	17, 104, 696, 842, 1035, 1181, 1272, 1889
TspGWI	ACGGA	3 cut(s)	113, 1078, 1097
TspRI	CASTG	4 cut(s)	673, 1704, 1923, 1966
VneI	GTGCAC	1 cut(s)	115
VpaK11BI	GGWCC	2 cut(s)	1342, 1852
XagI	CCTNNNNNAGG	2 cut(s)	1814, 1970
XapI	RAATTY	3 cut(s)	595, 1488, 1681
XceI	RCATGY	2 cut(s)	901, 1753
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1079, 1958
XhoI	CTCGAG	1 cut(s)	1373
XmnI	GAANNNNTTC	1 cut(s)	820
XspI	CTAG	4 cut(s)	378, 498, 942, 1365

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.