Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0010392

Physical Location & Seq

Genomic Coordinates Reverse (-)

55697797 .. 55702038

Gene Structure 4242 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G033980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGAAGCTTCAATGGACACCTTTACCAATCCTACTATGCCTTCTTTTTCTTCAGTTTACCTCAGCAGAGCCAACACCCATGAATTGTACGGACACGACTCGCCTCTGCACATCGTTCCTGGCCTTCAAGCCCGAACCCAATCAGACCCTGCCGGTGATTCAGTCCATGTTCGACGTGTTACCGGAGGACGTCACCGTCGGCGACCGTGGCTACGTCTTCATAAAAAAGAACTGTTCTTGCGCTTCTGGGGTCAACGAGTATTTGACCAACACGACGTTTACGGTGAGATCGAGTGAAGGGTATGTGTCCGACGTGGTGAATGAGGCCTATGGTGGCCTGACTTTCCTGCCCAACTCGACGAGGCGGGCCAGAAACGGCGCCGTTGTGTGGCTGAGGCTGCTGTGTGGGTGTTCGAGTGGGCTGTGGAACTATTTGATGAGCTATGTGATGGGGGAGGGGGATAGCATTGAGTCTTTGGCGAGTCGGTTCGGGGTTAGTATGGATAGTATTGAGAAAGTTAATGGGATTGTTGATCCTGATAATGTCACTGTTGGTGCTCTGTATTATATACCTTTGAATTCAGTTCCTGGTGAGCCTTATCCTTTGGAGACTATTTCTCCTGCTCCTGCTCCTGCTCCACCTGTTGACAATTTGTCAGAAAATCATGTGAATCATAAGGCGCATTTGCCCTATTTATGGATCGTAGGAAGTCTGGGGTTAGTTCTTGTTGTGATAGTAATAGGTATAGTTCTATATGTTTGCCTGAGGTCATCAAACTGCTGCGGTGAAGCACAAAGAAGTCACTCAAAAGATCCTGATCGTAAGATTAGGTTTCACATTCTTCGGGGCCCCAGTTTCTTTTGTGGTTCAGGAAGGTTCACCTGTTGCACGTCTGCTGATTGGAAGCAAACCAATGGGGATTCTAGCAACCAGCAGATAACTATTCCCAAAGCTCTTGGCAGTCATGTACTTGACATGGAAAAACCGGTGGTTTTTTCATATGAAGAAATCTTTTCCTCAACAGATGGATTCTCTGATTCACGTCTTCTGGGAAATGGAACTTATGGTTCTGTGTATTATGGCATACTTCATGAGCAGGAAGTTGCTATTAAAAGAATGACTGTTACAAAAACCAAAGAATTTCTAGCAGAAGTAAAAGTTCTATGCAGGGTTCATCATTCTAATCTGGTAGAATTGATTGGTTATGCAGCAACTGAAGATGAGCTCTTCTTAATATATGAGTACGCCCAAAAAGGTTCACTTAAAAGCCATTTGCATGATCCTCAGAACAAGGGTCAAACGTCACTTTCCTGGATCATGAGGCTCCAGATTGCTCTTGATGCTGCTAGAGGTCTTGAGTACATCCATGAGCACACTAAAGCTCATTATGTCCACCGGGATATCAAGACAAGCAACATCTTGCTTGATGGTGCCTTCAGGGGAAAGATTTCAGATTTTGGATTGGCAAAACTTGTTGGTAAAACAGGTGAAGGAGAAGCTACGGTAACCAAAGTTGTTGGTACATATGGTTATCTGGCTCCAGAATACTTGAGCGATGGGCGTGCTACTACAAAAAGTGATATTTATGCTTTTGGAGTTGTTCTCTTCGAGATTTTATCAGGAAAGGAGGCTGTTATACGAACTGAAGGCACAGTTACAAAAAATCCTGAAAGACGCTCACTGGTATCCATTGAGTACAGGTGTGAAAAGTTGTCACCAAATAAGAATGAAAGTCTAAATTATGTGGTCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023051 GO:0023052 GO:0023056 GO:0031347 GO:0031348 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1901419 GO:1901421 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

584

Amino Acids

64.58

Weight (kDa)

6.23

Isoelectric Point (pI)

38.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM3_LYK4_5	PF23473	144 - 181	6.8e-06	LYK4/5 LysM3 domain
LysM	PF01476	152 - 185	7.1e-06	LysM domain
Pkinase	PF00069	345 - 573	7.5e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	348 - 544	2.5e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51940
fragaria_vesca	FvH4_6g32430 FvH4_6g32430
malus_domestica	MD09G1202500.v1.1 MD17G1183700.v1.1
prunus_persica	Prupe.3G058700_v2.0.a1 Prupe.3G058700_v2.0.a1
pyrus_communis	pycom09g11950 pycom17g19310
rosa_chinensis	RchiOBHm_Chr2g0140581
rosa_laevigata	RLG00000019879
rosa_multiflora	Rmu_ssc0000213.1_g000121
rosa_roxburghii	Rroxscaffold_153G00436620 Rroxscaffold_2G00104660
rosa_rugosa	Rorug02G0363700
rosa_samantha	Rh2BG424600 Rh2BG424800 Rh2CG401300 Rh2DG434700
rosa_wichuraiana	Rw2G033960 Rw2G033980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	194
AatII	GACGTC	1 cut(s)	192
AccB1I	GGYRCC	2 cut(s)	377, 1430
AciI	CCGC	2 cut(s)	364, 783
AclWI	GGATC	5 cut(s)	527, 707, 806, 1274, 1322
AcsI	RAATTY	2 cut(s)	577, 1139
AcuI	CTGAAG	4 cut(s)	35, 1236, 1420, 1665
AcyI	GRCGYC	2 cut(s)	189, 378
AfaI	GTAC	6 cut(s)	88, 969, 1244, 1361, 1522, 1697
AfiI	CCNNNNNNNGG	2 cut(s)	387, 696
AflIII	ACRYGT	1 cut(s)	174
AgeI	ACCGGT	1 cut(s)	985
AgsI	TTSAA	3 cut(s)	11, 127, 577
AhdI	GACNNNNNGTC	1 cut(s)	652
AjiI	CACGTC	4 cut(s)	175, 313, 891, 1043
AjnI	CCWGG	3 cut(s)	117, 586, 1310
AluBI	AGCT	6 cut(s)	7, 441, 953, 1225, 1382, 1499
AluI	AGCT	6 cut(s)	7, 441, 953, 1225, 1382, 1499
Alw21I	GWGCWC	3 cut(s)	559, 1227, 1374
Alw26I	GTCTC	1 cut(s)	602
AlwI	GGATC	5 cut(s)	527, 707, 806, 1274, 1322
AlwNI	CAGNNNCTG	3 cut(s)	148, 587, 1214
AoxI	GGCC	5 cut(s)	120, 324, 334, 366, 847
ApaI	GGGCCC	1 cut(s)	851
ApeKI	GCWGC	4 cut(s)	397, 780, 1208, 1343
ApoI	RAATTY	2 cut(s)	577, 1139
AsiGI	ACCGGT	1 cut(s)	985
Asp700I	GAANNNNTTC	1 cut(s)	1447
AspLEI	GCGC	3 cut(s)	242, 380, 682
AspS9I	GGNCC	3 cut(s)	366, 847, 848
AsuC2I	CCSGG	1 cut(s)	1397
AsuHPI	GGTGA	9 cut(s)	166, 184, 295, 328, 602, 797, 871, 1499, 1707
AxyI	CCTNAGG	1 cut(s)	764
BaeGI	GKGCMC	1 cut(s)	851
BanI	GGYRCC	2 cut(s)	377, 1430
BanII	GRGCYC	2 cut(s)	851, 1227
BbsI	GAAGAC	2 cut(s)	208, 1037
Bbv12I	GWGCWC	3 cut(s)	559, 1227, 1374
BbvCI	CCTCAGC	2 cut(s)	61, 392
BbvI	GCAGC	4 cut(s)	384, 767, 1220, 1330
BccI	CCATC	4 cut(s)	442, 1019, 1421, 1550
BceAI	ACGGC	2 cut(s)	365, 391
BcgI	CGANNNNNNTGC	2 cut(s)	1544, 1578
BciT130I	CCWGG	3 cut(s)	119, 588, 1312
BciVI	GTATCC	1 cut(s)	1696
BcnI	CCSGG	1 cut(s)	1397
BcoDI	GTCTC	1 cut(s)	602
BfaI	CTAG	3 cut(s)	924, 1145, 1347
BfoI	RGCGCY	1 cut(s)	381
BfuI	GTATCC	1 cut(s)	1696
BisI	GCNGC	4 cut(s)	398, 781, 1209, 1344
BlsI	GCNGC	4 cut(s)	399, 782, 1210, 1345
Bme1390I	CCNGG	4 cut(s)	119, 588, 1312, 1397
BmeRI	GACNNNNNGTC	1 cut(s)	652
BmgBI	CACGTC	4 cut(s)	175, 313, 891, 1043
BmgT120I	GGNCC	3 cut(s)	366, 847, 848
BmiI	GGNNCC	7 cut(s)	379, 848, 849, 850, 1325, 1432, 1539
BmrFI	CCNGG	4 cut(s)	119, 588, 1312, 1397
BmrI	ACTGGG	1 cut(s)	846
BmsI	GCATC	1 cut(s)	1330
BmuI	ACTGGG	1 cut(s)	846
BpiI	GAAGAC	2 cut(s)	208, 1037
BplI	GAGNNNNNCTC	2 cut(s)	1587, 1619
BpmI	CTGGAG	2 cut(s)	1310, 1524
Bpu10I	CCTNAGC	2 cut(s)	61, 392
BpuEI	CTTGAG	2 cut(s)	1376, 1570
BpuMI	CCSGG	1 cut(s)	1397
BsaBI	GATNNNNATC	1 cut(s)	816
BsaHI	GRCGYC	2 cut(s)	189, 378
BsaJI	CCNNGG	1 cut(s)	205
BsaWI	WCCGGW	2 cut(s)	181, 985
BsaXI	ACNNNNNCTCC	2 cut(s)	601, 631
Bsc4I	CCNNNNNNNGG	2 cut(s)	387, 696
Bse118I	RCCGGY	2 cut(s)	151, 985
Bse1I	ACTGG	2 cut(s)	852, 1686
Bse21I	CCTNAGG	1 cut(s)	764
Bse8I	GATNNNNATC	1 cut(s)	816
BseBI	CCWGG	3 cut(s)	119, 588, 1312
BseDI	CCNNGG	1 cut(s)	205
BseGI	GGATG	1 cut(s)	1362
BseJI	GATNNNNATC	1 cut(s)	816
BseLI	CCNNNNNNNGG	2 cut(s)	387, 696
BseMII	CTCAG	4 cut(s)	75, 383, 755, 1298
BseNI	ACTGG	2 cut(s)	852, 1686
BseSI	GKGCMC	1 cut(s)	851
BseXI	GCAGC	4 cut(s)	384, 767, 1220, 1330
BsgI	GTGCAG	1 cut(s)	91
Bsh1285I	CGRYCG	1 cut(s)	205
BshFI	GGCC	5 cut(s)	122, 326, 336, 368, 849
BshNI	GGYRCC	2 cut(s)	377, 1430
BshTI	ACCGGT	1 cut(s)	985
BsiEI	CGRYCG	1 cut(s)	205
BsiHKAI	GWGCWC	3 cut(s)	559, 1227, 1374
BsiSI	CCGG	4 cut(s)	152, 182, 986, 1396
BslI	CCNNNNNNNGG	2 cut(s)	387, 696
BsmAI	GTCTC	1 cut(s)	602
BsnI	GGCC	5 cut(s)	122, 326, 336, 368, 849
Bsp120I	GGGCCC	1 cut(s)	847
Bsp1286I	GDGCHC	4 cut(s)	559, 851, 1227, 1374
Bsp143I	GATC	7 cut(s)	287, 532, 699, 811, 817, 1279, 1314
BspACI	CCGC	2 cut(s)	364, 783
BspANI	GGCC	5 cut(s)	122, 326, 336, 368, 849
BspCNI	CTCAG	4 cut(s)	74, 384, 756, 1297
BspHI	TCATGA	2 cut(s)	1090, 1317
BspLI	GGNNCC	7 cut(s)	379, 848, 849, 850, 1325, 1432, 1539
BspPI	GGATC	5 cut(s)	527, 707, 806, 1274, 1322
BspQI	GCTCTTC	1 cut(s)	1232
BspT107I	GGYRCC	2 cut(s)	377, 1430
BsrFI	RCCGGY	2 cut(s)	151, 985
BsrI	ACTGG	2 cut(s)	852, 1686
BssAI	RCCGGY	2 cut(s)	151, 985
BssECI	CCNNGG	1 cut(s)	205
BssMI	GATC	7 cut(s)	287, 532, 699, 811, 817, 1279, 1314
BssNI	GRCGYC	2 cut(s)	189, 378
Bst2UI	CCWGG	3 cut(s)	119, 588, 1312
Bst4CI	ACNGT	8 cut(s)	196, 206, 233, 283, 550, 1123, 1504, 1654
Bst6I	CTCTTC	2 cut(s)	1232, 1610
BstACI	GRCGYC	2 cut(s)	189, 378
BstC8I	GCNNGC	2 cut(s)	366, 1563
BstDEI	CTNAG	4 cut(s)	61, 392, 764, 1284
BstDSI	CCRYGG	1 cut(s)	205
BstEII	GGTNACC	1 cut(s)	1504
BstF5I	GGATG	1 cut(s)	1362
BstH2I	RGCGCY	1 cut(s)	381
BstHHI	GCGC	3 cut(s)	242, 380, 682
BstKTI	GATC	7 cut(s)	290, 535, 702, 814, 820, 1282, 1317
BstMAI	GTCTC	1 cut(s)	602
BstMBI	GATC	7 cut(s)	287, 532, 699, 811, 817, 1279, 1314
BstMCI	CGRYCG	1 cut(s)	205
BstMWI	GCNNNNNNNGC	3 cut(s)	207, 397, 1340
BstNI	CCWGG	3 cut(s)	119, 588, 1312
BstPI	GGTNACC	1 cut(s)	1504
BstSCI	CCNGG	4 cut(s)	117, 586, 1310, 1395
BstSLI	GKGCMC	1 cut(s)	851
BstV1I	GCAGC	4 cut(s)	384, 767, 1220, 1330
BstV2I	GAAGAC	2 cut(s)	208, 1037
BstX2I	RGATCY	1 cut(s)	811
BstYI	RGATCY	1 cut(s)	811
Bsu36I	CCTNAGG	1 cut(s)	764
BsuI	GTATCC	1 cut(s)	1696
BsuRI	GGCC	5 cut(s)	122, 326, 336, 368, 849
BtgI	CCRYGG	1 cut(s)	205
BtgZI	GCGATG	1 cut(s)	1569
BtrI	CACGTC	4 cut(s)	175, 313, 891, 1043
BtsCI	GGATG	1 cut(s)	1362
BtsIMutI	CAGTG	2 cut(s)	546, 1679
Cac8I	GCNNGC	2 cut(s)	366, 1563
CaiI	CAGNNNCTG	3 cut(s)	148, 587, 1214
CciI	TCATGA	2 cut(s)	1090, 1317
CfoI	GCGC	3 cut(s)	242, 380, 682
Cfr10I	RCCGGY	2 cut(s)	151, 985
Cfr13I	GGNCC	3 cut(s)	366, 847, 848
CseI	GACGC	1 cut(s)	1683
Csp6I	GTAC	6 cut(s)	87, 968, 1243, 1360, 1521, 1696
CspAI	ACCGGT	1 cut(s)	985
CviAII	CATG	9 cut(s)	79, 166, 665, 965, 976, 1091, 1277, 1318, 1367
CviQI	GTAC	6 cut(s)	87, 968, 1243, 1360, 1521, 1696
DdeI	CTNAG	4 cut(s)	61, 392, 764, 1284
DinI	GGCGCC	1 cut(s)	379
DpnI	GATC	7 cut(s)	289, 534, 701, 813, 819, 1281, 1316
DpnII	GATC	7 cut(s)	287, 532, 699, 811, 817, 1279, 1314
DrdI	GACNNNNNNGTC	1 cut(s)	194
DriI	GACNNNNNGTC	1 cut(s)	652
DseDI	GACNNNNNNGTC	1 cut(s)	194
Eam1104I	CTCTTC	2 cut(s)	1232, 1610
Eam1105I	GACNNNNNGTC	1 cut(s)	652
EarI	CTCTTC	2 cut(s)	1232, 1610
Ecl136II	GAGCTC	1 cut(s)	1225
Eco147I	AGGCCT	1 cut(s)	326
Eco24I	GRGCYC	2 cut(s)	851, 1227
Eco32I	GATATC	1 cut(s)	1402
Eco53kI	GAGCTC	1 cut(s)	1225
Eco57I	CTGAAG	4 cut(s)	35, 1236, 1420, 1665
Eco81I	CCTNAGG	1 cut(s)	764
Eco91I	GGTNACC	1 cut(s)	1504
EcoICRI	GAGCTC	1 cut(s)	1225
EcoO109I	RGGNCCY	2 cut(s)	847, 848
EcoO65I	GGTNACC	1 cut(s)	1504
EcoRI	GAATTC	1 cut(s)	577
EcoRII	CCWGG	3 cut(s)	117, 586, 1310
EcoRV	GATATC	1 cut(s)	1402
EcoT38I	GRGCYC	2 cut(s)	851, 1227
EgeI	GGCGCC	1 cut(s)	379
EheI	GGCGCC	1 cut(s)	379
FaeI	CATG	9 cut(s)	82, 169, 668, 968, 979, 1094, 1280, 1321, 1370
FalI	AAGNNNNNCTT	2 cut(s)	1245, 1277
FatI	CATG	9 cut(s)	78, 165, 664, 964, 975, 1090, 1276, 1317, 1366
FauI	CCCGC	1 cut(s)	357
FauNDI	CATATG	2 cut(s)	1000, 1525
Fnu4HI	GCNGC	4 cut(s)	398, 781, 1209, 1344
FokI	GGATG	1 cut(s)	1349
FriOI	GRGCYC	2 cut(s)	851, 1227
Fsp4HI	GCNGC	4 cut(s)	398, 781, 1209, 1344
FspBI	CTAG	3 cut(s)	924, 1145, 1347
GlaI	GCGC	3 cut(s)	241, 379, 681
GluI	GCNGC	4 cut(s)	398, 781, 1209, 1344
GsuI	CTGGAG	2 cut(s)	1310, 1524
HaeII	RGCGCY	1 cut(s)	381
HaeIII	GGCC	5 cut(s)	122, 326, 336, 368, 849
HapII	CCGG	4 cut(s)	152, 182, 986, 1396
HgaI	GACGC	1 cut(s)	1683
HhaI	GCGC	3 cut(s)	242, 380, 682
Hin1I	GRCGYC	2 cut(s)	189, 378
Hin1II	CATG	9 cut(s)	82, 169, 668, 968, 979, 1094, 1280, 1321, 1370
Hin6I	GCGC	3 cut(s)	240, 378, 680
HinP1I	GCGC	3 cut(s)	240, 378, 680
HincII	GTYRAC	2 cut(s)	253, 646
HindII	GTYRAC	2 cut(s)	253, 646
HindIII	AAGCTT	1 cut(s)	5
HinfI	GANTC	8 cut(s)	97, 157, 470, 481, 670, 920, 1029, 1037
HpaII	CCGG	4 cut(s)	152, 182, 986, 1396
HphI	GGTGA	9 cut(s)	166, 184, 295, 328, 602, 797, 871, 1499, 1707
Hpy166II	GTNNAC	7 cut(s)	57, 253, 279, 646, 879, 1259, 1393
Hpy188I	TCNGA	6 cut(s)	144, 310, 658, 1036, 1287, 1453
Hpy8I	GTNNAC	7 cut(s)	57, 253, 279, 646, 879, 1259, 1393
Hpy99I	CGWCG	5 cut(s)	176, 200, 277, 314, 361
HpyAV	CCTTC	7 cut(s)	50, 133, 290, 867, 1444, 1484, 1640
HpyCH4III	ACNGT	8 cut(s)	196, 206, 233, 283, 550, 1123, 1504, 1654
HpyCH4IV	ACGT	8 cut(s)	174, 189, 213, 275, 312, 890, 1042, 1301
HpyCH4V	TGCA	5 cut(s)	108, 888, 1167, 1208, 1276
HpyF10VI	GCNNNNNNNGC	3 cut(s)	207, 397, 1340
HpyF3I	CTNAG	4 cut(s)	61, 392, 764, 1284
HpySE526I	ACGT	8 cut(s)	174, 189, 213, 275, 312, 890, 1042, 1301
Hsp92I	GRCGYC	2 cut(s)	189, 378
Hsp92II	CATG	9 cut(s)	82, 169, 668, 968, 979, 1094, 1280, 1321, 1370
HspAI	GCGC	3 cut(s)	240, 378, 680
KasI	GGCGCC	1 cut(s)	377
Kzo9I	GATC	7 cut(s)	287, 532, 699, 811, 817, 1279, 1314
LguI	GCTCTTC	1 cut(s)	1232
LmnI	GCTCC	5 cut(s)	628, 634, 640, 1329, 1543
Lsp1109I	GCAGC	4 cut(s)	384, 767, 1220, 1330
LweI	GCATC	1 cut(s)	1330
MaeI	CTAG	3 cut(s)	924, 1145, 1347
MaeII	ACGT	8 cut(s)	174, 189, 213, 275, 312, 890, 1042, 1301
MaeIII	GTNAC	9 cut(s)	177, 190, 544, 800, 1123, 1302, 1504, 1654, 1713
MalI	GATC	7 cut(s)	289, 534, 701, 813, 819, 1281, 1316
MboI	GATC	7 cut(s)	287, 532, 699, 811, 817, 1279, 1314
MboII	GAAGA	8 cut(s)	41, 208, 833, 1016, 1037, 1219, 1229, 1597
MfeI	CAATTG	1 cut(s)	1750
MflI	RGATCY	1 cut(s)	811
MhlI	GDGCHC	4 cut(s)	559, 851, 1227, 1374
MluCI	AATT	7 cut(s)	82, 577, 649, 1139, 1193, 1738, 1750
Mly113I	GGCGCC	1 cut(s)	378
MlyI	GAGTC	3 cut(s)	91, 479, 490
MmeI	TCCRAC	1 cut(s)	333
MroXI	GAANNNNTTC	1 cut(s)	1447
MseI	TTAA	4 cut(s)	519, 1110, 1232, 1263
MslI	CAYNNNNRTG	1 cut(s)	1275
MspI	CCGG	4 cut(s)	152, 182, 986, 1396
MspR9I	CCNGG	4 cut(s)	119, 588, 1312, 1397
MunI	CAATTG	1 cut(s)	1750
MvaI	CCWGG	3 cut(s)	119, 588, 1312
MwoI	GCNNNNNNNGC	3 cut(s)	207, 397, 1340
NarI	GGCGCC	1 cut(s)	378
NciI	CCSGG	1 cut(s)	1397
NdeI	CATATG	2 cut(s)	1000, 1525
NdeII	GATC	7 cut(s)	287, 532, 699, 811, 817, 1279, 1314
NlaIII	CATG	9 cut(s)	82, 169, 668, 968, 979, 1094, 1280, 1321, 1370
NlaIV	GGNNCC	7 cut(s)	379, 848, 849, 850, 1325, 1432, 1539
NmuCI	GTSAC	5 cut(s)	190, 544, 800, 1302, 1713
PagI	TCATGA	2 cut(s)	1090, 1317
PceI	AGGCCT	1 cut(s)	326
PciSI	GCTCTTC	1 cut(s)	1232
PcsI	WCGNNNNNNNCGW	1 cut(s)	287
PdmI	GAANNNNTTC	1 cut(s)	1447
PfeI	GAWTC	5 cut(s)	157, 670, 920, 1029, 1037
PfoI	TCCNGGA	1 cut(s)	1310
PinAI	ACCGGT	1 cut(s)	985
PkrI	GCNGC	4 cut(s)	399, 782, 1210, 1345
PleI	GAGTC	3 cut(s)	91, 478, 489
PluTI	GGCGCC	1 cut(s)	381
PpsI	GAGTC	3 cut(s)	91, 478, 489
Psp124BI	GAGCTC	1 cut(s)	1227
Psp6I	CCWGG	3 cut(s)	117, 586, 1310
PspEI	GGTNACC	1 cut(s)	1504
PspGI	CCWGG	3 cut(s)	117, 586, 1310
PspN4I	GGNNCC	7 cut(s)	379, 848, 849, 850, 1325, 1432, 1539
PspOMI	GGGCCC	1 cut(s)	847
PspPI	GGNCC	3 cut(s)	366, 847, 848
PstNI	CAGNNNCTG	3 cut(s)	148, 587, 1214
PsuI	RGATCY	1 cut(s)	811
RsaI	GTAC	6 cut(s)	88, 969, 1244, 1361, 1522, 1697
RsaNI	GTAC	6 cut(s)	87, 968, 1243, 1360, 1521, 1696
RseI	CAYNNNNRTG	1 cut(s)	1275
SacI	GAGCTC	1 cut(s)	1227
SapI	GCTCTTC	1 cut(s)	1232
SaqAI	TTAA	4 cut(s)	519, 1110, 1232, 1263
SatI	GCNGC	4 cut(s)	398, 781, 1209, 1344
Sau3AI	GATC	7 cut(s)	287, 532, 699, 811, 817, 1279, 1314
Sau96I	GGNCC	3 cut(s)	366, 847, 848
SchI	GAGTC	3 cut(s)	91, 479, 490
ScrFI	CCNGG	4 cut(s)	119, 588, 1312, 1397
SduI	GDGCHC	4 cut(s)	559, 851, 1227, 1374
SfaNI	GCATC	1 cut(s)	1330
SfoI	GGCGCC	1 cut(s)	379
SmiMI	CAYNNNNRTG	1 cut(s)	1275
SmlI	CTYRAG	2 cut(s)	1355, 1549
SmoI	CTYRAG	2 cut(s)	1355, 1549
Sse9I	AATT	7 cut(s)	82, 577, 649, 1139, 1193, 1738, 1750
SseBI	AGGCCT	1 cut(s)	326
SsiI	CCGC	2 cut(s)	364, 783
SspDI	GGCGCC	1 cut(s)	377
SspMI	CTAG	3 cut(s)	924, 1145, 1347
SstI	GAGCTC	1 cut(s)	1227
StuI	AGGCCT	1 cut(s)	326
StyD4I	CCNGG	4 cut(s)	117, 586, 1310, 1395
TaaI	ACNGT	8 cut(s)	196, 206, 233, 283, 550, 1123, 1504, 1654
TaiI	ACGT	8 cut(s)	177, 192, 216, 278, 315, 893, 1045, 1304
TaqI	TCGA	5 cut(s)	171, 290, 356, 413, 1608
TasI	AATT	7 cut(s)	82, 577, 649, 1139, 1193, 1738, 1750
TatI	WGTACW	3 cut(s)	967, 1359, 1695
TfiI	GAWTC	5 cut(s)	157, 670, 920, 1029, 1037
Tru1I	TTAA	4 cut(s)	519, 1110, 1232, 1263
Tru9I	TTAA	4 cut(s)	519, 1110, 1232, 1263
TscAI	CASTG	2 cut(s)	553, 1686
TseFI	GTSAC	5 cut(s)	190, 544, 800, 1302, 1713
TseI	GCWGC	4 cut(s)	397, 780, 1208, 1343
Tsp45I	GTSAC	5 cut(s)	190, 544, 800, 1302, 1713
TspDTI	ATGAA	8 cut(s)	17, 95, 208, 987, 1017, 1079, 1163, 1743
TspGWI	ACGGA	1 cut(s)	104
TspRI	CASTG	2 cut(s)	553, 1686
XapI	RAATTY	2 cut(s)	577, 1139
XmnI	GAANNNNTTC	1 cut(s)	1447
XspI	CTAG	3 cut(s)	924, 1145, 1347
ZraI	GACGTC	1 cut(s)	190

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.