Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0010392

Physical Location & Seq

Genomic Coordinates Reverse (-)

54508860 .. 54513845

Gene Structure 4986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG401300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGAAGCTTCAATGGACACCTTTAGCAATCCTACTATGCCTTCTTTTTCTTCAGTTTACCTCAGCAGAGCCAACACCCATGAAGTGTACCGACACAACTCGCCTCTGCACATCGTTCCTGGCCTTCAAGCCCGAACCCAATCAGACCCTGCCGGTGATTCAGTCCATGTTCGACGTGTTACCGGAAGACGTCACCGTCGGCGACCGTGGCTACGTCTTCATAAAAAAGAACTGTTCTTGCGCTTCTAGGGTCAACGAGTATTTGACAAACACGACGTTTACGGTGAGATCGAGTGAAGGGTTTGTGTCTGACGTGGTGAATGAGGCCTATGGTGGCCTGACTTTCCTGCCCAACTCGACGAGGCGGGCCAGAAACGGCGCCGTTGTGTGGCTGAGGCTGCTGTGCGGGTGTTCGAGTGGGCTGTGGAACTATTTGATGAGCTATGTGATGGGGGAGGGGGATAGCATTGAGTCTTTGGCGAGTCGGTTCGGGGTTAGTATGGATAGTATTGAGAAAGTTAATGGGATTGTTGATCCTGATAATGTCACTGTTGGTGCTCTGTATTACATACCTTTGAATTCAGTTCCTGGTGAGCCTTATCCTTTGGAGACTATTTCTCCTGCTCCTGTTCCTGCTCCACCTGTTGACAATTTGTCAGCAAATCATGTGAATCATAAGGCGCATTTGCCCTATTTATGGATCGTAGGAAGTCTGGGGTTAGTTCTTGTTGTGATAGTAATAGGTATAGTTCTATATGTTTGCCTGAGGTCATCAAACTGCTGCAGTGAAGCACAAAGAAGTCACTCAAAAGATCCTGATCGTAAGATTAGGTTTCACATTCTTCGGAGCCCCAGTTTCTTTTGTGGTTCAGGAAGGTTCACCTGTTGCACGTCTGCTGATTGGAAGCAAACCAATGGGGATTCTAGCAACCAGCAGATAACTATTCCCAAAGTTCTTGGCAGTCATGTACTTGACATGGAAAAACCGGTGGTTTTTACATATGAAGAAATCTTTTCCTCAACAGATGGATTCTCTGATTCACGTCTTCTGGGAAATGGAACTTATGGTTCTGTGTATTATGGCTTACTTCATGAGCAGGAAGTTGCTATTAAAAGAATGACTGTTACAAAAACCAAAGAATTTCTAGCAGAAGTAAAAGTTCTATGCAGGGTTCATCATTCTAATCTGGTAGAATTGATTGGTTATGCAGCAACTGAAGATGAGCTCTTCTTAATATATGAGTACGCCCAAAAAGGTTCACTTAAAAGCCATTTGCATGATCCTCAGAACAAGGGTCAAACGTCACTTTCCTGGATCATGAGGCTCCAGATTGCTCTTGATGCTGCTAGAGGTCTTGAGTACATCCATGAGCACACTAAAGCTCATTATGTCCACCGGGATATCAAGACAAGCAACATCTTGCTTGATGGTGCCTTCAGGGGAAAGATTTCAGATTTTGGATTGGCAAAACTTGTTGGTAAAACAGGTGAAGGAGAAGCTACGGTAACCAAAGTTGTTGGTACATATGGTTATCTGGCTCCAGAATACTTGAGCGATGGGCGTGCTACTACAAAAAGTGATATTTATGCTTTTGGAGTTGTTCTCTTCGAGATTTTATCAGGGAAGGAGGCTGTTATACGAACTGAAGGCACAGTTACAAAAACTCCTGAAAGACGCTCACTGGTATCCATTATGCAAGCAGCTCTTAAAAGCGCATCTGACTCCATGAGTATGTCAATCTTGAAAGATTACATTGATCCAAATCTGATGGACTTGTATCCCCATGATTGTCTACTCAAGGTGGCCATGATAGCTAAGCAATGTGTAGATGAAGATCCCATCCTACGGCCTGACATGAAACAAATTGTTATTTCCCTGTCACAAATCCTCCTATCCTCGGTCGAGTGGGAAGCTACTCTTGCGGGGAACAGCCAGGTATTCAGTGGCCTTGTTCAGGGAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023051 GO:0023052 GO:0023056 GO:0031347 GO:0031348 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1901419 GO:1901421 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

654

Amino Acids

72.24

Weight (kDa)

6.17

Isoelectric Point (pI)

38.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM3_LYK4_5	PF23473	144 - 181	7.9e-06	LYK4/5 LysM3 domain
LysM	PF01476	152 - 185	8.1e-06	LysM domain
Pkinase	PF00069	345 - 623	3.8e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	348 - 625	1.1e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51940
fragaria_vesca	FvH4_6g32430 FvH4_6g32430
malus_domestica	MD09G1202500.v1.1 MD17G1183700.v1.1
prunus_persica	Prupe.3G058700_v2.0.a1 Prupe.3G058700_v2.0.a1
pyrus_communis	pycom09g11950 pycom17g19310
rosa_chinensis	RchiOBHm_Chr2g0140581
rosa_laevigata	RLG00000019879
rosa_multiflora	Rmu_ssc0000213.1_g000121
rosa_roxburghii	Rroxscaffold_153G00436620 Rroxscaffold_2G00104660
rosa_rugosa	Rorug02G0363700
rosa_samantha	Rh2BG424600 Rh2BG424800 Rh2CG401300 Rh2DG434700
rosa_wichuraiana	Rw2G033960 Rw2G033980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	194
AatII	GACGTC	1 cut(s)	192
AccB1I	GGYRCC	2 cut(s)	377, 1430
AccI	GTMKAC	1 cut(s)	1792
AciI	CCGC	3 cut(s)	364, 405, 1922
AclWI	GGATC	7 cut(s)	527, 707, 806, 1274, 1322, 1751, 1829
AcoI	YGGCCR	1 cut(s)	1803
AcsI	RAATTY	2 cut(s)	577, 1139
AcuI	CTGAAG	4 cut(s)	35, 1236, 1420, 1665
AcyI	GRCGYC	2 cut(s)	189, 378
AfaI	GTAC	5 cut(s)	88, 969, 1244, 1361, 1522
AfiI	CCNNNNNNNGG	5 cut(s)	387, 696, 1845, 1897, 1954
AflIII	ACRYGT	1 cut(s)	174
AgeI	ACCGGT	1 cut(s)	985
AgsI	TTSAA	4 cut(s)	11, 127, 577, 1744
AhdI	GACNNNNNGTC	1 cut(s)	652
AjiI	CACGTC	4 cut(s)	175, 313, 891, 1043
AjnI	CCWGG	4 cut(s)	117, 586, 1310, 1932
AluBI	AGCT	8 cut(s)	7, 441, 1225, 1382, 1499, 1703, 1814, 1913
AluI	AGCT	8 cut(s)	7, 441, 1225, 1382, 1499, 1703, 1814, 1913
Alw21I	GWGCWC	3 cut(s)	559, 1227, 1374
Alw26I	GTCTC	1 cut(s)	602
AlwI	GGATC	7 cut(s)	527, 707, 806, 1274, 1322, 1751, 1829
AlwNI	CAGNNNCTG	3 cut(s)	148, 587, 1214
AoxI	GGCC	7 cut(s)	120, 324, 334, 366, 1803, 1847, 1945
ApeKI	GCWGC	5 cut(s)	397, 780, 1208, 1343, 1700
ApoI	RAATTY	2 cut(s)	577, 1139
AsiGI	ACCGGT	1 cut(s)	985
Asp700I	GAANNNNTTC	1 cut(s)	1447
AspLEI	GCGC	4 cut(s)	242, 380, 682, 1715
AspS9I	GGNCC	1 cut(s)	366
AsuC2I	CCSGG	1 cut(s)	1397
AsuHPI	GGTGA	7 cut(s)	166, 184, 295, 328, 602, 871, 1499
AxyI	CCTNAGG	1 cut(s)	764
BalI	TGGCCA	1 cut(s)	1805
BanI	GGYRCC	2 cut(s)	377, 1430
BanII	GRGCYC	2 cut(s)	851, 1227
BbsI	GAAGAC	3 cut(s)	192, 208, 1037
Bbv12I	GWGCWC	3 cut(s)	559, 1227, 1374
BbvCI	CCTCAGC	2 cut(s)	61, 392
BbvI	GCAGC	5 cut(s)	384, 767, 1220, 1330, 1712
BccI	CCATC	6 cut(s)	442, 1019, 1421, 1550, 1762, 1847
BceAI	ACGGC	3 cut(s)	365, 391, 1862
BcgI	CGANNNNNNTGC	2 cut(s)	1544, 1578
BciT130I	CCWGG	4 cut(s)	119, 588, 1312, 1934
BciVI	GTATCC	2 cut(s)	1696, 1788
BcnI	CCSGG	1 cut(s)	1397
BcoDI	GTCTC	1 cut(s)	602
BfaI	CTAG	4 cut(s)	246, 924, 1145, 1347
BfmI	CTRYAG	1 cut(s)	781
BfoI	RGCGCY	1 cut(s)	381
BfuI	GTATCC	2 cut(s)	1696, 1788
BisI	GCNGC	5 cut(s)	398, 781, 1209, 1344, 1701
BlpI	GCTNAGC	1 cut(s)	1815
BlsI	GCNGC	5 cut(s)	399, 782, 1210, 1345, 1702
Bme1390I	CCNGG	5 cut(s)	119, 588, 1312, 1397, 1934
BmeRI	GACNNNNNGTC	1 cut(s)	652
BmgBI	CACGTC	4 cut(s)	175, 313, 891, 1043
BmgT120I	GGNCC	1 cut(s)	366
BmiI	GGNNCC	5 cut(s)	379, 848, 1325, 1432, 1539
BmrFI	CCNGG	5 cut(s)	119, 588, 1312, 1397, 1934
BmrI	ACTGGG	1 cut(s)	846
BmsI	GCATC	2 cut(s)	1330, 1724
BmuI	ACTGGG	1 cut(s)	846
BpiI	GAAGAC	3 cut(s)	192, 208, 1037
BplI	GAGNNNNNCTC	2 cut(s)	1587, 1619
BpmI	CTGGAG	2 cut(s)	1310, 1524
Bpu10I	CCTNAGC	2 cut(s)	61, 392
Bpu1102I	GCTNAGC	1 cut(s)	1815
BpuEI	CTTGAG	3 cut(s)	1376, 1570, 1781
BpuMI	CCSGG	1 cut(s)	1397
BsaBI	GATNNNNATC	3 cut(s)	816, 1761, 1833
BsaHI	GRCGYC	2 cut(s)	189, 378
BsaJI	CCNNGG	2 cut(s)	205, 1896
BsaWI	WCCGGW	2 cut(s)	181, 985
BsaXI	ACNNNNNCTCC	8 cut(s)	601, 631, 838, 868, 1648, 1678, 1872, 1902
Bsc4I	CCNNNNNNNGG	5 cut(s)	387, 696, 1845, 1897, 1954
Bse118I	RCCGGY	2 cut(s)	151, 985
Bse1I	ACTGG	2 cut(s)	852, 1686
Bse21I	CCTNAGG	1 cut(s)	764
Bse3DI	GCAATG	1 cut(s)	1826
Bse8I	GATNNNNATC	3 cut(s)	816, 1761, 1833
BseBI	CCWGG	4 cut(s)	119, 588, 1312, 1934
BseDI	CCNNGG	2 cut(s)	205, 1896
BseGI	GGATG	2 cut(s)	1362, 1839
BseJI	GATNNNNATC	3 cut(s)	816, 1761, 1833
BseLI	CCNNNNNNNGG	5 cut(s)	387, 696, 1845, 1897, 1954
BseMI	GCAATG	1 cut(s)	1826
BseMII	CTCAG	4 cut(s)	75, 383, 755, 1298
BseNI	ACTGG	2 cut(s)	852, 1686
BseXI	GCAGC	5 cut(s)	384, 767, 1220, 1330, 1712
BsgI	GTGCAG	1 cut(s)	91
Bsh1285I	CGRYCG	2 cut(s)	205, 1902
BshFI	GGCC	7 cut(s)	122, 326, 336, 368, 1805, 1849, 1947
BshNI	GGYRCC	2 cut(s)	377, 1430
BshTI	ACCGGT	1 cut(s)	985
BsiEI	CGRYCG	2 cut(s)	205, 1902
BsiHKAI	GWGCWC	3 cut(s)	559, 1227, 1374
BsiSI	CCGG	4 cut(s)	152, 182, 986, 1396
BslI	CCNNNNNNNGG	5 cut(s)	387, 696, 1845, 1897, 1954
BsmAI	GTCTC	1 cut(s)	602
BsnI	GGCC	7 cut(s)	122, 326, 336, 368, 1805, 1849, 1947
Bsp1286I	GDGCHC	4 cut(s)	559, 851, 1227, 1374
Bsp143I	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1314, 1756, 1834
Bsp1720I	GCTNAGC	1 cut(s)	1815
BspACI	CCGC	3 cut(s)	364, 405, 1922
BspANI	GGCC	7 cut(s)	122, 326, 336, 368, 1805, 1849, 1947
BspCNI	CTCAG	4 cut(s)	74, 384, 756, 1297
BspHI	TCATGA	2 cut(s)	1090, 1317
BspLI	GGNNCC	5 cut(s)	379, 848, 1325, 1432, 1539
BspMAI	CTGCAG	1 cut(s)	785
BspPI	GGATC	7 cut(s)	527, 707, 806, 1274, 1322, 1751, 1829
BspQI	GCTCTTC	1 cut(s)	1232
BspT107I	GGYRCC	2 cut(s)	377, 1430
BsrDI	GCAATG	1 cut(s)	1826
BsrFI	RCCGGY	2 cut(s)	151, 985
BsrI	ACTGG	2 cut(s)	852, 1686
BssAI	RCCGGY	2 cut(s)	151, 985
BssECI	CCNNGG	2 cut(s)	205, 1896
BssMI	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1314, 1756, 1834
BssNI	GRCGYC	2 cut(s)	189, 378
Bst2UI	CCWGG	4 cut(s)	119, 588, 1312, 1934
Bst4CI	ACNGT	8 cut(s)	196, 206, 233, 283, 550, 1123, 1504, 1654
Bst6I	CTCTTC	2 cut(s)	1232, 1610
BstACI	GRCGYC	2 cut(s)	189, 378
BstC8I	GCNNGC	3 cut(s)	366, 1563, 1698
BstDEI	CTNAG	5 cut(s)	61, 392, 764, 1284, 1815
BstDSI	CCRYGG	1 cut(s)	205
BstEII	GGTNACC	1 cut(s)	1504
BstENI	CCTNNNNNAGG	1 cut(s)	1952
BstF5I	GGATG	2 cut(s)	1362, 1839
BstH2I	RGCGCY	1 cut(s)	381
BstHHI	GCGC	4 cut(s)	242, 380, 682, 1715
BstKTI	GATC	9 cut(s)	290, 535, 702, 814, 820, 1282, 1317, 1759, 1837
BstMAI	GTCTC	1 cut(s)	602
BstMBI	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1314, 1756, 1834
BstMCI	CGRYCG	2 cut(s)	205, 1902
BstMWI	GCNNNNNNNGC	5 cut(s)	207, 397, 1340, 1811, 1919
BstNI	CCWGG	4 cut(s)	119, 588, 1312, 1934
BstPI	GGTNACC	1 cut(s)	1504
BstSCI	CCNGG	5 cut(s)	117, 586, 1310, 1395, 1932
BstSFI	CTRYAG	1 cut(s)	781
BstV1I	GCAGC	5 cut(s)	384, 767, 1220, 1330, 1712
BstV2I	GAAGAC	3 cut(s)	192, 208, 1037
BstX2I	RGATCY	2 cut(s)	811, 1834
BstYI	RGATCY	2 cut(s)	811, 1834
Bsu36I	CCTNAGG	1 cut(s)	764
BsuI	GTATCC	2 cut(s)	1696, 1788
BsuRI	GGCC	7 cut(s)	122, 326, 336, 368, 1805, 1849, 1947
BtgI	CCRYGG	1 cut(s)	205
BtgZI	GCGATG	1 cut(s)	1569
BtrI	CACGTC	4 cut(s)	175, 313, 891, 1043
BtsCI	GGATG	2 cut(s)	1362, 1839
BtsI	GCAGTG	1 cut(s)	790
BtsIMutI	CAGTG	4 cut(s)	546, 790, 1679, 1948
Cac8I	GCNNGC	3 cut(s)	366, 1563, 1698
CaiI	CAGNNNCTG	3 cut(s)	148, 587, 1214
CciI	TCATGA	2 cut(s)	1090, 1317
CfoI	GCGC	4 cut(s)	242, 380, 682, 1715
Cfr10I	RCCGGY	2 cut(s)	151, 985
Cfr13I	GGNCC	1 cut(s)	366
CseI	GACGC	1 cut(s)	1683
Csp6I	GTAC	5 cut(s)	87, 968, 1243, 1360, 1521
CspAI	ACCGGT	1 cut(s)	985
CviQI	GTAC	5 cut(s)	87, 968, 1243, 1360, 1521
DdeI	CTNAG	5 cut(s)	61, 392, 764, 1284, 1815
DinI	GGCGCC	1 cut(s)	379
DpnI	GATC	9 cut(s)	289, 534, 701, 813, 819, 1281, 1316, 1758, 1836
DpnII	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1314, 1756, 1834
DrdI	GACNNNNNNGTC	1 cut(s)	194
DriI	GACNNNNNGTC	1 cut(s)	652
DseDI	GACNNNNNNGTC	1 cut(s)	194
EaeI	YGGCCR	1 cut(s)	1803
Eam1104I	CTCTTC	2 cut(s)	1232, 1610
Eam1105I	GACNNNNNGTC	1 cut(s)	652
EarI	CTCTTC	2 cut(s)	1232, 1610
Ecl136II	GAGCTC	1 cut(s)	1225
Eco147I	AGGCCT	1 cut(s)	326
Eco24I	GRGCYC	2 cut(s)	851, 1227
Eco32I	GATATC	1 cut(s)	1402
Eco53kI	GAGCTC	1 cut(s)	1225
Eco57I	CTGAAG	4 cut(s)	35, 1236, 1420, 1665
Eco81I	CCTNAGG	1 cut(s)	764
Eco91I	GGTNACC	1 cut(s)	1504
EcoICRI	GAGCTC	1 cut(s)	1225
EcoNI	CCTNNNNNAGG	1 cut(s)	1952
EcoO65I	GGTNACC	1 cut(s)	1504
EcoRI	GAATTC	1 cut(s)	577
EcoRII	CCWGG	4 cut(s)	117, 586, 1310, 1932
EcoRV	GATATC	1 cut(s)	1402
EcoT38I	GRGCYC	2 cut(s)	851, 1227
EgeI	GGCGCC	1 cut(s)	379
EheI	GGCGCC	1 cut(s)	379
FalI	AAGNNNNNCTT	6 cut(s)	1245, 1277, 1689, 1721, 1902, 1934
FauI	CCCGC	3 cut(s)	357, 398, 1915
FauNDI	CATATG	2 cut(s)	1000, 1525
FblI	GTMKAC	1 cut(s)	1792
Fnu4HI	GCNGC	5 cut(s)	398, 781, 1209, 1344, 1701
FokI	GGATG	2 cut(s)	1349, 1826
FriOI	GRGCYC	2 cut(s)	851, 1227
Fsp4HI	GCNGC	5 cut(s)	398, 781, 1209, 1344, 1701
FspBI	CTAG	4 cut(s)	246, 924, 1145, 1347
GlaI	GCGC	4 cut(s)	241, 379, 681, 1714
GluI	GCNGC	5 cut(s)	398, 781, 1209, 1344, 1701
GsuI	CTGGAG	2 cut(s)	1310, 1524
HaeII	RGCGCY	1 cut(s)	381
HaeIII	GGCC	7 cut(s)	122, 326, 336, 368, 1805, 1849, 1947
HapII	CCGG	4 cut(s)	152, 182, 986, 1396
HgaI	GACGC	1 cut(s)	1683
HhaI	GCGC	4 cut(s)	242, 380, 682, 1715
Hin1I	GRCGYC	2 cut(s)	189, 378
Hin6I	GCGC	4 cut(s)	240, 378, 680, 1713
HinP1I	GCGC	4 cut(s)	240, 378, 680, 1713
HincII	GTYRAC	2 cut(s)	253, 646
HindII	GTYRAC	2 cut(s)	253, 646
HindIII	AAGCTT	1 cut(s)	5
HinfI	GANTC	8 cut(s)	157, 470, 481, 670, 920, 1029, 1037, 1721
HpaII	CCGG	4 cut(s)	152, 182, 986, 1396
HphI	GGTGA	7 cut(s)	166, 184, 295, 328, 602, 871, 1499
Hpy166II	GTNNAC	9 cut(s)	57, 87, 253, 279, 646, 879, 1259, 1393, 1793
Hpy188I	TCNGA	8 cut(s)	144, 310, 846, 1036, 1287, 1453, 1720, 1767
Hpy8I	GTNNAC	9 cut(s)	57, 87, 253, 279, 646, 879, 1259, 1393, 1793
Hpy99I	CGWCG	4 cut(s)	176, 200, 277, 361
HpyAV	CCTTC	9 cut(s)	50, 133, 290, 867, 1444, 1484, 1618, 1640, 1953
HpyCH4III	ACNGT	8 cut(s)	196, 206, 233, 283, 550, 1123, 1504, 1654
HpyCH4IV	ACGT	8 cut(s)	174, 189, 213, 275, 312, 890, 1042, 1301
HpyCH4V	TGCA	7 cut(s)	108, 783, 888, 1167, 1208, 1276, 1696
HpyF10VI	GCNNNNNNNGC	5 cut(s)	207, 397, 1340, 1811, 1919
HpyF3I	CTNAG	5 cut(s)	61, 392, 764, 1284, 1815
HpySE526I	ACGT	8 cut(s)	174, 189, 213, 275, 312, 890, 1042, 1301
Hsp92I	GRCGYC	2 cut(s)	189, 378
HspAI	GCGC	4 cut(s)	240, 378, 680, 1713
KasI	GGCGCC	1 cut(s)	377
Kzo9I	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1314, 1756, 1834
LguI	GCTCTTC	1 cut(s)	1232
LmnI	GCTCC	5 cut(s)	628, 640, 846, 1329, 1543
Lsp1109I	GCAGC	5 cut(s)	384, 767, 1220, 1330, 1712
LweI	GCATC	2 cut(s)	1330, 1724
MaeI	CTAG	4 cut(s)	246, 924, 1145, 1347
MaeII	ACGT	8 cut(s)	174, 189, 213, 275, 312, 890, 1042, 1301
MaeIII	GTNAC	9 cut(s)	177, 190, 544, 800, 1123, 1302, 1504, 1654, 1878
MalI	GATC	9 cut(s)	289, 534, 701, 813, 819, 1281, 1316, 1758, 1836
MboI	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1314, 1756, 1834
MflI	RGATCY	2 cut(s)	811, 1834
MhlI	GDGCHC	4 cut(s)	559, 851, 1227, 1374
MlsI	TGGCCA	1 cut(s)	1805
MluCI	AATT	5 cut(s)	577, 649, 1139, 1193, 1863
MluNI	TGGCCA	1 cut(s)	1805
Mly113I	GGCGCC	1 cut(s)	378
MlyI	GAGTC	3 cut(s)	479, 490, 1715
Mox20I	TGGCCA	1 cut(s)	1805
MroXI	GAANNNNTTC	1 cut(s)	1447
MscI	TGGCCA	1 cut(s)	1805
MseI	TTAA	5 cut(s)	519, 1110, 1232, 1263, 1707
MslI	CAYNNNNRTG	2 cut(s)	1275, 1730
Msp20I	TGGCCA	1 cut(s)	1805
MspI	CCGG	4 cut(s)	152, 182, 986, 1396
MspR9I	CCNGG	5 cut(s)	119, 588, 1312, 1397, 1934
MvaI	CCWGG	4 cut(s)	119, 588, 1312, 1934
MwoI	GCNNNNNNNGC	5 cut(s)	207, 397, 1340, 1811, 1919
NarI	GGCGCC	1 cut(s)	378
NciI	CCSGG	1 cut(s)	1397
NdeI	CATATG	2 cut(s)	1000, 1525
NdeII	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1314, 1756, 1834
NlaIV	GGNNCC	5 cut(s)	379, 848, 1325, 1432, 1539
NmuCI	GTSAC	5 cut(s)	190, 544, 800, 1302, 1878
PagI	TCATGA	2 cut(s)	1090, 1317
PceI	AGGCCT	1 cut(s)	326
PciSI	GCTCTTC	1 cut(s)	1232
PcsI	WCGNNNNNNNCGW	1 cut(s)	287
PdmI	GAANNNNTTC	1 cut(s)	1447
PfeI	GAWTC	5 cut(s)	157, 670, 920, 1029, 1037
PfoI	TCCNGGA	1 cut(s)	1310
PinAI	ACCGGT	1 cut(s)	985
PkrI	GCNGC	5 cut(s)	399, 782, 1210, 1345, 1702
PleI	GAGTC	3 cut(s)	478, 489, 1715
PluTI	GGCGCC	1 cut(s)	381
PpsI	GAGTC	3 cut(s)	478, 489, 1715
Psp124BI	GAGCTC	1 cut(s)	1227
Psp6I	CCWGG	4 cut(s)	117, 586, 1310, 1932
PspEI	GGTNACC	1 cut(s)	1504
PspGI	CCWGG	4 cut(s)	117, 586, 1310, 1932
PspN4I	GGNNCC	5 cut(s)	379, 848, 1325, 1432, 1539
PspPI	GGNCC	1 cut(s)	366
PstI	CTGCAG	1 cut(s)	785
PstNI	CAGNNNCTG	3 cut(s)	148, 587, 1214
PsuI	RGATCY	2 cut(s)	811, 1834
RsaI	GTAC	5 cut(s)	88, 969, 1244, 1361, 1522
RsaNI	GTAC	5 cut(s)	87, 968, 1243, 1360, 1521
RseI	CAYNNNNRTG	2 cut(s)	1275, 1730
SacI	GAGCTC	1 cut(s)	1227
SapI	GCTCTTC	1 cut(s)	1232
SaqAI	TTAA	5 cut(s)	519, 1110, 1232, 1263, 1707
SatI	GCNGC	5 cut(s)	398, 781, 1209, 1344, 1701
Sau3AI	GATC	9 cut(s)	287, 532, 699, 811, 817, 1279, 1314, 1756, 1834
Sau96I	GGNCC	1 cut(s)	366
SchI	GAGTC	3 cut(s)	479, 490, 1715
ScrFI	CCNGG	5 cut(s)	119, 588, 1312, 1397, 1934
SduI	GDGCHC	4 cut(s)	559, 851, 1227, 1374
SfaNI	GCATC	2 cut(s)	1330, 1724
SfcI	CTRYAG	1 cut(s)	781
SfoI	GGCGCC	1 cut(s)	379
SmiMI	CAYNNNNRTG	2 cut(s)	1275, 1730
SmlI	CTYRAG	3 cut(s)	1355, 1549, 1796
SmoI	CTYRAG	3 cut(s)	1355, 1549, 1796
Sse9I	AATT	5 cut(s)	577, 649, 1139, 1193, 1863
SseBI	AGGCCT	1 cut(s)	326
SsiI	CCGC	3 cut(s)	364, 405, 1922
SspDI	GGCGCC	1 cut(s)	377
SspMI	CTAG	4 cut(s)	246, 924, 1145, 1347
SstI	GAGCTC	1 cut(s)	1227
StuI	AGGCCT	1 cut(s)	326
StyD4I	CCNGG	5 cut(s)	117, 586, 1310, 1395, 1932
TaaI	ACNGT	8 cut(s)	196, 206, 233, 283, 550, 1123, 1504, 1654
TaiI	ACGT	8 cut(s)	177, 192, 216, 278, 315, 893, 1045, 1304
TaqI	TCGA	6 cut(s)	171, 290, 356, 413, 1608, 1902
TaqII	GACCGA	1 cut(s)	1888
TasI	AATT	5 cut(s)	577, 649, 1139, 1193, 1863
TatI	WGTACW	2 cut(s)	967, 1359
TfiI	GAWTC	5 cut(s)	157, 670, 920, 1029, 1037
Tru1I	TTAA	5 cut(s)	519, 1110, 1232, 1263, 1707
Tru9I	TTAA	5 cut(s)	519, 1110, 1232, 1263, 1707
TscAI	CASTG	4 cut(s)	553, 790, 1686, 1948
TseFI	GTSAC	5 cut(s)	190, 544, 800, 1302, 1878
TseI	GCWGC	5 cut(s)	397, 780, 1208, 1343, 1700
Tsp45I	GTSAC	5 cut(s)	190, 544, 800, 1302, 1878
TspDTI	ATGAA	8 cut(s)	17, 95, 208, 1017, 1079, 1163, 1845, 1871
TspRI	CASTG	4 cut(s)	553, 790, 1686, 1948
XagI	CCTNNNNNAGG	1 cut(s)	1952
XapI	RAATTY	2 cut(s)	577, 1139
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1940
XmiI	GTMKAC	1 cut(s)	1792
XmnI	GAANNNNTTC	1 cut(s)	1447
XspI	CTAG	4 cut(s)	246, 924, 1145, 1347
ZraI	GACGTC	1 cut(s)	190

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.