Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0011432

Physical Location & Seq

Genomic Coordinates Forward (+)

1231400 .. 1233301

Gene Structure 1902 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1008600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGCACTCGTACTTTAAGCGGCTTCATGGATTTCATAAGACCTCTCTTTCCTATTATTCTCGTCAAATAGATCACTGTTTGTCACTAAAGTCTGTAAATTTTGTGAAAATTATACACGCCCAGTTGATCAAAGTAGGGTTTAACAGCCATACTTTTCTGGGTAATCGTTGTCTCGATGTTTACTTTCGATTTGGTGACACCCTGCACGATGCATTGAAAGTGTTTGATGAAATTACCGATAAGAATCTTGTTTCGTGGAACATTTGCTTAAAGGGGCTCGGTCGATTTGGGGAGATTGAAAAAGCCCGCCATATGTTTGCTGCAATGCCTGAAAGAGATGTAGTTAGTTGGAACTCGATGATTTCGGGTCATGTTTCCTGTGGGTTTATTGATAATGCATTGGAGGTTTTCTCACAAATGCAAATCGCTGGCGTGAGACCTAGTGAGTACACATTCTCAATTATGATGACGCATGTGACGTCTGCTTGTTATGGTAAGCAAATCCATGGTGATATGATTAGGAGCGGTATGAATTTGTCAAATGTGGTTCTTGGGAATTCTTTAATTGACATGTATGGAAAGCTTGGTTGTGTGGATTATGCTTTTGGCGTGTTTTTCACTATGGAGGAGGTGGATGTTATCTCGTGGAACTCTTTGATTTCGGGTTGTCATAGATCAGGGTATGAGGAATTGGCACTAGATCAGTTCTTTTGGATGAGAGCCACCGAGTATGCACCTGATGAGTTTACAATATCAACTGTGATCAATGTTTGCTGTAACTTGCTTGATTTGGAAAAGGGTAAGCAAACATTTGCATTCTGCTTCAAGGTGGGATTTTTTTCTAATAGCATTGTATCAAGTGCTGCTATTGACCTGCTTTCGAAATGCAACAGATTAGAGGGTGCAATCCGGCTCTTTGAAGAACTGGATTGGTGGGATTCAGCCGTTTGTAATTCCATGATTTCAAGCTATGCACAGCATGGCTGTGGGGAGGATGCCGTGCAACTGTTTGTGTTGACCTTGAGGGAGAACCTAAGGCCAACTGAGTTTACACTAAGCAGCATGCTAAGCTCTGTGTCCATTTTTCTTCCAGCAGAGCCGGGTAGCCAAATTCATTCTTTGGTTGTTAAGTTAGGTTTTGAGTCAGATGCAATTGTTGCTAGTTCACTTGTTGATTTGTACAGTAAAGCTGGATTGGTAAATTATGCCATGAAAATATTTTCAAATATGGGCGTGAAAGATTTGATAACTTGGAACACCATAATTATGGGTTTGGCTCACAATGGTAAAGTGTTCAAGACCCTGAGCATTTTCAAGGAATTGGTTAGCAAAGGTGCTGCACCAGATAATTTAACACTAGCTGGAGTTTTAATGGCTTGCAACTTTGGGGGTTTTATTGAAGAGGGGATGACCATATTTTTAACAATGGAGAAGGAATATGGAATCATACCTGGGGAAGAGCACTATGCTCCCATAGTAGACTTGTTGTGTCGAGCTGGTAGACTCAGAGAAGCAATGGATGTACTTGCAGCAATGCCTTATGAACCTGGTTCTGTGGTATGGGAATCGATTCTTCATGCTTGTGTTATTCACGAAGACTTTAAACTCACTGAAAGAGTTGCAAAAAGGATGATGAAGTTGGTGCCACAGTCATCTCTACCTTATTTGGTACTAGCTAGGGCATATGAAATGAGAGGAAAATGGGAAAGCATGATTTGGGTCAGGAAATCCATGAAACTTAACGGGGTGAAGAAAATTGTAGGATGCAGTTGGATTGGGATTCAGAACCATGTATATACCTTTAGCGCAGAAGAATTACAGCCTCCAAGAGGCAAAGACATTTATTTGATATTGAGATCACTGTCATCGGAAATGGAGGCTGAAGATTACACTAATATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

634

Amino Acids

71.18

Weight (kDa)

6.04

Isoelectric Point (pI)

34.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	112 - 157	8.7e-13	PPR repeat family
PPR	PF01535	115 - 144	4.8e-07	PPR repeat
PPR_2	PF13041	212 - 260	7.3e-09	PPR repeat family
PPR_2	PF13041	414 - 454	1.1e-06	PPR repeat family
E_motif	PF20431	531 - 592	5.7e-08	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011432)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43980
fragaria_vesca	FvH4_2g15270 FvH4_2g15270
malus_domestica	MD10G1008600.v1.1
prunus_persica	Prupe.8G012400_v2.0.a1 Prupe.8G012400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0277991 RchiOBHm_Chr6g0278001
rosa_laevigata	RLG00000013249
rosa_multiflora	Rmu_co8471873.1_g000001
rosa_roxburghii	Rroxscaffold_7G00190600
rosa_rugosa	Rorug06G0113900 Rorug06G0114000
rosa_samantha	Rh2CG626400 Rh6AG223600 Rh6AG223700 Rh6BG227800 Rh6CG230300 Rh6DG221100
rosa_wichuraiana	Rw6G019540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	482
Acc36I	ACCTGC	1 cut(s)	882
AccB1I	GGYRCC	1 cut(s)	1642
AccBSI	CCGCTC	1 cut(s)	525
AccI	GTMKAC	2 cut(s)	1479, 1501
AciI	CCGC	3 cut(s)	19, 307, 525
AcsI	RAATTY	4 cut(s)	97, 532, 556, 1110
AcuI	CTGAAG	1 cut(s)	1902
AcyI	GRCGYC	1 cut(s)	479
AfaI	GTAC	5 cut(s)	11, 449, 1181, 1524, 1671
AfiI	CCNNNNNNNGG	1 cut(s)	1829
AflIII	ACRYGT	1 cut(s)	570
AgsI	TTSAA	9 cut(s)	217, 299, 826, 920, 966, 1224, 1297, 1315, 1400
AjnI	CCWGG	2 cut(s)	1450, 1546
AluBI	AGCT	7 cut(s)	583, 969, 1071, 1190, 1361, 1496, 1676
AluI	AGCT	7 cut(s)	583, 969, 1071, 1190, 1361, 1496, 1676
Alw21I	GWGCWC	1 cut(s)	1464
Alw26I	GTCTC	2 cut(s)	176, 430
AoxI	GGCC	1 cut(s)	1037
ApeKI	GCWGC	5 cut(s)	320, 863, 1059, 1337, 1529
ApoI	RAATTY	4 cut(s)	97, 532, 556, 1110
Asp700I	GAANNNNTTC	1 cut(s)	1569
AspLEI	GCGC	1 cut(s)	1808
AsuC2I	CCSGG	1 cut(s)	1101
AsuHPI	GGTGA	3 cut(s)	206, 521, 1759
AsuII	TTCGAA	1 cut(s)	881
AxyI	CCTNAGG	1 cut(s)	1034
BanI	GGYRCC	1 cut(s)	1642
BanII	GRGCYC	1 cut(s)	279
BauI	CACGAG	1 cut(s)	643
BbsI	GAAGAC	1 cut(s)	1602
Bbv12I	GWGCWC	1 cut(s)	1464
BbvI	GCAGC	5 cut(s)	307, 850, 1071, 1324, 1541
BceAI	ACGGC	2 cut(s)	929, 983
BciT130I	CCWGG	2 cut(s)	1452, 1548
BclI	TGATCA	2 cut(s)	126, 762
BcnI	CCSGG	1 cut(s)	1101
BcoDI	GTCTC	2 cut(s)	176, 430
BfaI	CTAG	6 cut(s)	441, 698, 1161, 1358, 1673, 1677
BfuAI	ACCTGC	1 cut(s)	882
BisI	GCNGC	6 cut(s)	20, 321, 864, 1060, 1338, 1530
BlpI	GCTNAGC	1 cut(s)	1067
BlsI	GCNGC	6 cut(s)	21, 322, 865, 1061, 1339, 1531
Bme1390I	CCNGG	3 cut(s)	1101, 1452, 1548
BmiI	GGNNCC	1 cut(s)	1644
BmrFI	CCNGG	3 cut(s)	1101, 1452, 1548
BmrI	ACTGGG	1 cut(s)	115
BmsI	GCATC	4 cut(s)	199, 985, 1138, 1754
BmuI	ACTGGG	1 cut(s)	115
BpiI	GAAGAC	1 cut(s)	1602
BplI	GAGNNNNNCTC	2 cut(s)	395, 427
BpmI	CTGGAG	1 cut(s)	1383
Bpu10I	CCTNAGC	1 cut(s)	1304
Bpu1102I	GCTNAGC	1 cut(s)	1067
Bpu14I	TTCGAA	1 cut(s)	881
BpuEI	CTTGAG	1 cut(s)	1042
BpuMI	CCSGG	1 cut(s)	1101
Bsa29I	ATCGAT	1 cut(s)	1568
BsaBI	GATNNNNATC	1 cut(s)	243
BsaHI	GRCGYC	1 cut(s)	479
BsaI	GGTCTC	1 cut(s)	430
BsaJI	CCNNGG	2 cut(s)	505, 1451
Bsc4I	CCNNNNNNNGG	1 cut(s)	1829
Bse1I	ACTGG	2 cut(s)	121, 930
Bse21I	CCTNAGG	1 cut(s)	1034
Bse3DI	GCAATG	3 cut(s)	330, 1521, 1539
Bse8I	GATNNNNATC	1 cut(s)	243
BseBI	CCWGG	2 cut(s)	1452, 1548
BseCI	ATCGAT	1 cut(s)	1568
BseDI	CCNNGG	2 cut(s)	505, 1451
BseGI	GGATG	7 cut(s)	640, 720, 1000, 1413, 1525, 1635, 1769
BseJI	GATNNNNATC	1 cut(s)	243
BseLI	CCNNNNNNNGG	1 cut(s)	1829
BseMI	GCAATG	3 cut(s)	330, 1521, 1539
BseMII	CTCAG	3 cut(s)	1035, 1295, 1519
BseNI	ACTGG	2 cut(s)	121, 930
BseRI	GAGGAG	1 cut(s)	641
BseXI	GCAGC	5 cut(s)	307, 850, 1071, 1324, 1541
BsgI	GTGCAG	2 cut(s)	188, 1323
Bsh1285I	CGRYCG	1 cut(s)	283
BshFI	GGCC	1 cut(s)	1039
BshNI	GGYRCC	1 cut(s)	1642
BshVI	ATCGAT	1 cut(s)	1568
BsiEI	CGRYCG	1 cut(s)	283
BsiHKAI	GWGCWC	1 cut(s)	1464
BsiSI	CCGG	2 cut(s)	910, 1100
BslI	CCNNNNNNNGG	1 cut(s)	1829
BsmAI	GTCTC	2 cut(s)	176, 430
BsmI	GAATGC	1 cut(s)	815
BsnI	GGCC	1 cut(s)	1039
Bso31I	GGTCTC	1 cut(s)	430
Bsp119I	TTCGAA	1 cut(s)	881
Bsp1286I	GDGCHC	2 cut(s)	279, 1464
Bsp1407I	TGTACA	1 cut(s)	1179
Bsp143I	GATC	6 cut(s)	70, 126, 674, 700, 762, 1856
Bsp1720I	GCTNAGC	1 cut(s)	1067
Bsp19I	CCATGG	1 cut(s)	505
BspACI	CCGC	3 cut(s)	19, 307, 525
BspANI	GGCC	1 cut(s)	1039
BspCNI	CTCAG	3 cut(s)	1036, 1296, 1518
BspDI	ATCGAT	1 cut(s)	1568
BspLI	GGNNCC	1 cut(s)	1644
BspMI	ACCTGC	1 cut(s)	882
BspQI	GCTCTTC	1 cut(s)	1452
BspT104I	TTCGAA	1 cut(s)	881
BspT107I	GGYRCC	1 cut(s)	1642
BspTNI	GGTCTC	1 cut(s)	430
BsrBI	CCGCTC	1 cut(s)	525
BsrDI	GCAATG	3 cut(s)	330, 1521, 1539
BsrGI	TGTACA	1 cut(s)	1179
BsrI	ACTGG	2 cut(s)	121, 930
BssECI	CCNNGG	2 cut(s)	505, 1451
BssMI	GATC	6 cut(s)	70, 126, 674, 700, 762, 1856
BssNI	GRCGYC	1 cut(s)	479
BssSI	CACGAG	1 cut(s)	643
BssT1I	CCWWGG	1 cut(s)	505
Bst2BI	CACGAG	1 cut(s)	643
Bst2UI	CCWGG	2 cut(s)	1452, 1548
Bst4CI	ACNGT	6 cut(s)	77, 760, 1008, 1184, 1650, 1863
Bst6I	CTCTTC	2 cut(s)	1395, 1452
BstACI	GRCGYC	1 cut(s)	479
BstAPI	GCANNNNNTGC	1 cut(s)	1157
BstAUI	TGTACA	1 cut(s)	1179
BstBI	TTCGAA	1 cut(s)	881
BstC8I	GCNNGC	4 cut(s)	307, 430, 1064, 1378
BstDEI	CTNAG	6 cut(s)	1034, 1044, 1055, 1067, 1304, 1505
BstDSI	CCRYGG	1 cut(s)	505
BstENI	CCTNNNNNAGG	1 cut(s)	1827
BstF5I	GGATG	7 cut(s)	640, 720, 1000, 1413, 1525, 1635, 1769
BstHHI	GCGC	1 cut(s)	1808
BstKTI	GATC	6 cut(s)	73, 129, 677, 703, 765, 1859
BstMAI	GTCTC	2 cut(s)	176, 430
BstMBI	GATC	6 cut(s)	70, 126, 674, 700, 762, 1856
BstMCI	CGRYCG	1 cut(s)	283
BstMWI	GCNNNNNNNGC	2 cut(s)	1068, 1157
BstNI	CCWGG	2 cut(s)	1452, 1548
BstNSI	RCATGY	3 cut(s)	476, 574, 1066
BstSCI	CCNGG	3 cut(s)	1099, 1450, 1546
BstV1I	GCAGC	5 cut(s)	307, 850, 1071, 1324, 1541
BstV2I	GAAGAC	1 cut(s)	1602
BstXI	CCANNNNNNTGG	1 cut(s)	1267
Bsu15I	ATCGAT	1 cut(s)	1568
Bsu36I	CCTNAGG	1 cut(s)	1034
BsuRI	GGCC	1 cut(s)	1039
BsuTUI	ATCGAT	1 cut(s)	1568
BtgI	CCRYGG	1 cut(s)	505
BtsCI	GGATG	7 cut(s)	640, 720, 1000, 1413, 1525, 1635, 1769
BtsIMutI	CAGTG	3 cut(s)	73, 1608, 1859
BveI	ACCTGC	1 cut(s)	882
Cac8I	GCNNGC	4 cut(s)	307, 430, 1064, 1378
CfoI	GCGC	1 cut(s)	1808
ClaI	ATCGAT	1 cut(s)	1568
CseI	GACGC	1 cut(s)	478
CsiI	ACCWGGT	1 cut(s)	1546
Csp6I	GTAC	5 cut(s)	10, 448, 1180, 1523, 1670
CviQI	GTAC	5 cut(s)	10, 448, 1180, 1523, 1670
DdeI	CTNAG	6 cut(s)	1034, 1044, 1055, 1067, 1304, 1505
DpnI	GATC	6 cut(s)	72, 128, 676, 702, 764, 1858
DpnII	GATC	6 cut(s)	70, 126, 674, 700, 762, 1856
DraI	TTTAAA	1 cut(s)	1603
Eam1104I	CTCTTC	2 cut(s)	1395, 1452
EarI	CTCTTC	2 cut(s)	1395, 1452
Eco130I	CCWWGG	1 cut(s)	505
Eco24I	GRGCYC	1 cut(s)	279
Eco31I	GGTCTC	1 cut(s)	430
Eco57I	CTGAAG	1 cut(s)	1902
Eco81I	CCTNAGG	1 cut(s)	1034
EcoNI	CCTNNNNNAGG	1 cut(s)	1827
EcoRI	GAATTC	1 cut(s)	556
EcoRII	CCWGG	2 cut(s)	1450, 1546
EcoT14I	CCWWGG	1 cut(s)	505
EcoT22I	ATGCAT	2 cut(s)	214, 400
EcoT38I	GRGCYC	1 cut(s)	279
ErhI	CCWWGG	1 cut(s)	505
FauI	CCCGC	1 cut(s)	314
FauNDI	CATATG	2 cut(s)	312, 1684
FbaI	TGATCA	2 cut(s)	126, 762
FblI	GTMKAC	2 cut(s)	1479, 1501
Fnu4HI	GCNGC	6 cut(s)	20, 321, 864, 1060, 1338, 1530
FokI	GGATG	7 cut(s)	647, 727, 1007, 1420, 1532, 1642, 1776
FriOI	GRGCYC	1 cut(s)	279
Fsp4HI	GCNGC	6 cut(s)	20, 321, 864, 1060, 1338, 1530
FspBI	CTAG	6 cut(s)	441, 698, 1161, 1358, 1673, 1677
GlaI	GCGC	1 cut(s)	1807
GluI	GCNGC	6 cut(s)	20, 321, 864, 1060, 1338, 1530
GsuI	CTGGAG	1 cut(s)	1383
HaeIII	GGCC	1 cut(s)	1039
HapII	CCGG	2 cut(s)	910, 1100
HgaI	GACGC	1 cut(s)	478
HhaI	GCGC	1 cut(s)	1808
Hin1I	GRCGYC	1 cut(s)	479
Hin6I	GCGC	1 cut(s)	1806
HinP1I	GCGC	1 cut(s)	1806
HincII	GTYRAC	1 cut(s)	1017
HindII	GTYRAC	1 cut(s)	1017
HindIII	AAGCTT	1 cut(s)	581
HinfI	GANTC	8 cut(s)	244, 938, 1142, 1443, 1503, 1565, 1570, 1780
HpaII	CCGG	2 cut(s)	910, 1100
HphI	GGTGA	3 cut(s)	206, 521, 1759
Hpy166II	GTNNAC	8 cut(s)	181, 450, 747, 1017, 1050, 1166, 1480, 1502
Hpy188I	TCNGA	4 cut(s)	1147, 1508, 1785, 1870
Hpy188III	TCNNGA	4 cut(s)	173, 1297, 1592, 1723
Hpy8I	GTNNAC	8 cut(s)	181, 450, 747, 1017, 1050, 1166, 1480, 1502
HpyAV	CCTTC	1 cut(s)	1426
HpyCH4III	ACNGT	6 cut(s)	77, 760, 1008, 1184, 1650, 1863
HpyCH4IV	ACGT	1 cut(s)	479
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1068, 1157
HpyF3I	CTNAG	6 cut(s)	1034, 1044, 1055, 1067, 1304, 1505
HpySE526I	ACGT	1 cut(s)	479
Hsp92I	GRCGYC	1 cut(s)	479
HspAI	GCGC	1 cut(s)	1806
Ksp22I	TGATCA	2 cut(s)	126, 762
Kzo9I	GATC	6 cut(s)	70, 126, 674, 700, 762, 1856
LguI	GCTCTTC	1 cut(s)	1452
LmnI	GCTCC	2 cut(s)	522, 1474
Lsp1109I	GCAGC	5 cut(s)	307, 850, 1071, 1324, 1541
LweI	GCATC	4 cut(s)	199, 985, 1138, 1754
MabI	ACCWGGT	1 cut(s)	1546
MaeI	CTAG	6 cut(s)	441, 698, 1161, 1358, 1673, 1677
MaeII	ACGT	1 cut(s)	479
MaeIII	GTNAC	4 cut(s)	81, 194, 475, 776
MalI	GATC	6 cut(s)	72, 128, 676, 702, 764, 1858
MbiI	CCGCTC	1 cut(s)	525
MboI	GATC	6 cut(s)	70, 126, 674, 700, 762, 1856
MboII	GAAGA	9 cut(s)	932, 1079, 1412, 1469, 1565, 1607, 1762, 1823, 1895
MfeI	CAATTG	1 cut(s)	1152
MhlI	GDGCHC	2 cut(s)	279, 1464
MlyI	GAGTC	2 cut(s)	1151, 1497
MmeI	TCCRAC	2 cut(s)	329, 1751
Mph1103I	ATGCAT	2 cut(s)	214, 400
MroXI	GAANNNNTTC	1 cut(s)	1569
MslI	CAYNNNNRTG	3 cut(s)	984, 1265, 1581
MspI	CCGG	2 cut(s)	910, 1100
MspR9I	CCNGG	3 cut(s)	1101, 1452, 1548
MunI	CAATTG	1 cut(s)	1152
Mva1269I	GAATGC	1 cut(s)	815
MvaI	CCWGG	2 cut(s)	1452, 1548
MwoI	GCNNNNNNNGC	2 cut(s)	1068, 1157
NciI	CCSGG	1 cut(s)	1101
NcoI	CCATGG	1 cut(s)	505
NdeI	CATATG	2 cut(s)	312, 1684
NdeII	GATC	6 cut(s)	70, 126, 674, 700, 762, 1856
NlaIV	GGNNCC	1 cut(s)	1644
NmuCI	GTSAC	3 cut(s)	81, 194, 475
NsiI	ATGCAT	2 cut(s)	214, 400
NspI	RCATGY	3 cut(s)	476, 574, 1066
NspV	TTCGAA	1 cut(s)	881
PaeI	GCATGC	1 cut(s)	1066
PciI	ACATGT	1 cut(s)	570
PciSI	GCTCTTC	1 cut(s)	1452
PcsI	WCGNNNNNNNCGW	1 cut(s)	476
PctI	GAATGC	1 cut(s)	815
PdmI	GAANNNNTTC	1 cut(s)	1569
PfeI	GAWTC	6 cut(s)	244, 938, 1443, 1565, 1570, 1780
PkrI	GCNGC	6 cut(s)	21, 322, 865, 1061, 1339, 1531
PleI	GAGTC	2 cut(s)	1150, 1497
PpsI	GAGTC	2 cut(s)	1150, 1497
PscI	ACATGT	1 cut(s)	570
Psp6I	CCWGG	2 cut(s)	1450, 1546
PspGI	CCWGG	2 cut(s)	1450, 1546
PspN4I	GGNNCC	1 cut(s)	1644
RsaI	GTAC	5 cut(s)	11, 449, 1181, 1524, 1671
RsaNI	GTAC	5 cut(s)	10, 448, 1180, 1523, 1670
RseI	CAYNNNNRTG	3 cut(s)	984, 1265, 1581
SapI	GCTCTTC	1 cut(s)	1452
SatI	GCNGC	6 cut(s)	20, 321, 864, 1060, 1338, 1530
Sau3AI	GATC	6 cut(s)	70, 126, 674, 700, 762, 1856
SchI	GAGTC	2 cut(s)	1151, 1497
ScrFI	CCNGG	3 cut(s)	1101, 1452, 1548
SduI	GDGCHC	2 cut(s)	279, 1464
SexAI	ACCWGGT	1 cut(s)	1546
SfaNI	GCATC	4 cut(s)	199, 985, 1138, 1754
SfuI	TTCGAA	1 cut(s)	881
SmiMI	CAYNNNNRTG	3 cut(s)	984, 1265, 1581
SmlI	CTYRAG	1 cut(s)	1021
SmoI	CTYRAG	1 cut(s)	1021
SphI	GCATGC	1 cut(s)	1066
SsiI	CCGC	3 cut(s)	19, 307, 525
SspI	AATATT	1 cut(s)	1218
SspMI	CTAG	6 cut(s)	441, 698, 1161, 1358, 1673, 1677
StyD4I	CCNGG	3 cut(s)	1099, 1450, 1546
StyI	CCWWGG	1 cut(s)	505
TaaI	ACNGT	6 cut(s)	77, 760, 1008, 1184, 1650, 1863
TaiI	ACGT	1 cut(s)	482
TaqI	TCGA	7 cut(s)	174, 187, 283, 356, 881, 1492, 1568
TaqII	GACCGA	1 cut(s)	269
TatI	WGTACW	3 cut(s)	447, 1179, 1522
TauI	GCSGC	1 cut(s)	22
TfiI	GAWTC	6 cut(s)	244, 938, 1443, 1565, 1570, 1780
TscAI	CASTG	3 cut(s)	80, 1615, 1866
TseFI	GTSAC	3 cut(s)	81, 194, 475
TseI	GCWGC	5 cut(s)	320, 863, 1059, 1337, 1529
Tsp45I	GTSAC	3 cut(s)	81, 194, 475
TspRI	CASTG	3 cut(s)	80, 1615, 1866
XagI	CCTNNNNNAGG	1 cut(s)	1827
XapI	RAATTY	4 cut(s)	97, 532, 556, 1110
XceI	RCATGY	3 cut(s)	476, 574, 1066
XmiI	GTMKAC	2 cut(s)	1479, 1501
XmnI	GAANNNNTTC	1 cut(s)	1569
XspI	CTAG	6 cut(s)	441, 698, 1161, 1358, 1673, 1677
ZraI	GACGTC	1 cut(s)	480
Zsp2I	ATGCAT	2 cut(s)	214, 400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.