Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0011432

Physical Location & Seq

Genomic Coordinates Forward (+)

28621280 .. 28625638

Gene Structure 4359 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013249

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGCAATCGCTTTTCAAACAAGTCAATGGGCTTCATAAAACCTCACTCCCCTACTACTCCCATCTCATAGACCACTGTTTGTCCCTCAAATCCTTCACCCACGTCAAACTTTTACATGCCCGGTTGGTAAAAGTGGGACTCAATACCCATACCTTTCTGGGTAATCGTTTTCTCGACGTTTACTTTCGGTTTGGTTCGCTTTTCGATGCATTGAGAGTGTTTGATGAGATTAGCTGCAAGAACATTGTGTCTAGGAACATTTTCTTGAAGGGTTTGTGTCGATTTGGCGAGTTTGAGAGGGCACAGCAGGTGTTCGATGAAATGCCTGAGAGAGATGTGGTTAGTTGGAATTCGATGATTTCGGGTTACGTTTCGTGTGGATTGGTTGGTAATGCAATGGGGATGTTTTCGAAAATGCAGAGTTCAGGTGTGAGACCGAGTGAGTACACGTTTTCGATTATGATGTCAGTTGTGTCGTGCGCTGGTCGTGCGAAGCAAGTTCATGGTGGTATGATCAGGAAGGGTTTGGATTTATCGAATGTGGTACTTGGGAATTCGTTGATTGGTATGTATGGAAAGATTGGTTTGATGGATTACGCTTTTGGAGTGTTTTTGACTATGAAGGAGGTGGATGTCATTTCTTGGAACACTTTGATTTGGGGTTGTCATAGATCAGGGTATGAAGAATTGGCCATAGATCAGTTTGTTGTTATGAGAAGCACTGAGCATTGCCCTGACGAGTTTACGATATCAACTGTGATCAATGTTTGTTGTAACTTGCTTGATTTGGAAAGGGGTAAGCAAATTATTGCTTTCAGCTTCAAGGTGGGATTCTTTTCTAATAGCATTGTATCAAGTGCTGCTATTGACATGTTTTCCAAATGCAACAGATTGGAGGATGCGGTCCGGCTCTTTCACGAACTAAGCTGGTGGGATTCAGCCGTTTGCAATTCCATGATTTCAAGCTATGAAAGGCATGGTTGTGCAGAGAATGCCGTGCTGCTTTTTGTGCTGACCTTGAGAAAGAATCTCAGGCCAACTGAGTTTACTCTTAGCAGTGCACTGAGCTGTATGTCCACTTTTCTTCCAGTTGAGCAGGGTTTCCAAATCCATTCTTGGGTTATTAAGTTAGGCTTTGAGTCAGATGCTATTGTCGCTAGTTCACTTGTTGATTTTTACACTAAACTTGGATTAATAAATCATGCCATGAAAATCTTTGCAAGTATGGGGGTGAAAGATTTGATATCTTGGAACACCATGATTATGGGTTTGGCTCACAATGGTAAATTATTTGAGACCCTGGACACATTCAAGGAATTAGTTAGTGAAGGTATGCCGGCAGATAACGTAACATTAACTGGAGTTTTATTAGCTTGCAACTTTGGGAGCTTTGTGGATGAGGGTATGTCAATATTTAGGTCCATGGAGAAGGAATATGGGATCAAACCTGCGGAAGAGCATTATACGTGCATAATAGAGTTGTTGACTCGTGTAGGTAAACTCAAAGCAGCAATGGATATAGTAGCAGCAATGCCTTATGAACCTAGTTCTGTGATATGGGAATCAATGCTTCGTGCTTGTGCGATTCAGCAAGACATCAAAATTACTGAAAGAGTTGCACAACTGATGATGAAGTCAGAACCGCAGTCATCTCTACCTTATTTGGTGCTAGCTCGAGCGTATGAAATGAGAGGAAGATGGGAAAGCATGATTCGGGTTACAAAAGAGATGAAACACAAAGGCGTAAAGAATGTTGTCGGATGTAGTTGGATTGAGATACAGAAACATGTATATACTTTTAAGGCAGATCAATTGCAGCATCATAGAGGTAGCAGCTTGGGACACTTCGACCGCTGGAGTGAAATTGTCACATCGTCACACAGCACCAACCAGCTCAACCCCAAAGAGTTTCATTCTTCAACCATTGACGGGCCACGAGTGACCATTGAACGTATACCTTTGCTAATGGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

658

Amino Acids

74.11

Weight (kDa)

7.57

Isoelectric Point (pI)

37.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	111 - 156	7e-14	PPR repeat family
PPR	PF01535	114 - 144	4.2e-08	PPR repeat
PPR_2	PF13041	211 - 259	1.4e-08	PPR repeat family
PPR_2	PF13041	413 - 458	4.6e-06	PPR repeat family
E_motif	PF20431	532 - 592	2.5e-07	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011432)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43980
fragaria_vesca	FvH4_2g15270 FvH4_2g15270
malus_domestica	MD10G1008600.v1.1
prunus_persica	Prupe.8G012400_v2.0.a1 Prupe.8G012400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0277991 RchiOBHm_Chr6g0278001
rosa_laevigata	RLG00000013249
rosa_multiflora	Rmu_co8471873.1_g000001
rosa_roxburghii	Rroxscaffold_7G00190600
rosa_rugosa	Rorug06G0113900 Rorug06G0114000
rosa_samantha	Rh2CG626400 Rh6AG223600 Rh6AG223700 Rh6BG227800 Rh6CG230300 Rh6DG221100
rosa_wichuraiana	Rw6G019540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	298
Acc36I	ACCTGC	2 cut(s)	298, 1456
AccI	GTMKAC	1 cut(s)	1954
AciI	CCGC	4 cut(s)	902, 1451, 1643, 1852
AclWI	GGATC	1 cut(s)	1448
AcoI	YGGCCR	1 cut(s)	690
AcsI	RAATTY	2 cut(s)	349, 553
AfaI	GTAC	2 cut(s)	446, 546
AfiI	CCNNNNNNNGG	2 cut(s)	1117, 1929
AflIII	ACRYGT	3 cut(s)	447, 870, 1786
AgsI	TTSAA	7 cut(s)	16, 268, 823, 963, 1312, 1920, 1949
AjiI	CACGTC	1 cut(s)	103
AjnI	CCWGG	1 cut(s)	1299
Alw21I	GWGCWC	1 cut(s)	1063
Alw26I	GTCTC	2 cut(s)	427, 1289
Alw44I	GTGCAC	1 cut(s)	1059
AlwI	GGATC	1 cut(s)	1448
Ama87I	CYCGRG	1 cut(s)	1674
AoxI	GGCC	3 cut(s)	690, 1034, 1931
ApaLI	GTGCAC	1 cut(s)	1059
ApeKI	GCWGC	7 cut(s)	234, 860, 1000, 1508, 1526, 1816, 1833
ApoI	RAATTY	2 cut(s)	349, 553
AseI	ATTAAT	1 cut(s)	1193
Asp700I	GAANNNNTTC	1 cut(s)	260
AspLEI	GCGC	1 cut(s)	482
AspS9I	GGNCC	3 cut(s)	904, 1419, 1931
AsuC2I	CCSGG	1 cut(s)	121
AsuHPI	GGTGA	2 cut(s)	88, 1243
AsuII	TTCGAA	1 cut(s)	410
AsuNHI	GCTAGC	1 cut(s)	1669
AvaI	CYCGRG	1 cut(s)	1674
AvaII	GGWCC	2 cut(s)	904, 1419
BaeGI	GKGCMC	2 cut(s)	304, 1063
BalI	TGGCCA	1 cut(s)	692
BauI	CACGAG	2 cut(s)	1488, 1935
Bbv12I	GWGCWC	1 cut(s)	1063
BbvI	GCAGC	7 cut(s)	221, 847, 987, 1520, 1538, 1828, 1845
BccI	CCATC	3 cut(s)	69, 583, 1692
BceAI	ACGGC	2 cut(s)	926, 980
BciT130I	CCWGG	1 cut(s)	1301
BclI	TGATCA	2 cut(s)	513, 759
BcnI	CCSGG	1 cut(s)	121
BcoDI	GTCTC	2 cut(s)	427, 1289
BfaI	CTAG	4 cut(s)	252, 1158, 1545, 1670
BfuAI	ACCTGC	2 cut(s)	298, 1456
BisI	GCNGC	7 cut(s)	235, 861, 1001, 1509, 1527, 1817, 1834
BlsI	GCNGC	7 cut(s)	236, 862, 1002, 1510, 1528, 1818, 1835
Bme1390I	CCNGG	2 cut(s)	121, 1301
Bme18I	GGWCC	2 cut(s)	904, 1419
BmeT110I	CYCGRG	1 cut(s)	1674
BmgBI	CACGTC	1 cut(s)	103
BmgT120I	GGNCC	3 cut(s)	904, 1419, 1931
BmrFI	CCNGG	2 cut(s)	121, 1301
BmsI	GCATC	4 cut(s)	196, 889, 1135, 1828
BmtI	GCTAGC	1 cut(s)	1673
BpmI	CTGGAG	2 cut(s)	1380, 1876
Bpu14I	TTCGAA	1 cut(s)	410
BpuEI	CTTGAG	1 cut(s)	1039
BpuMI	CCSGG	1 cut(s)	121
BsaAI	YACGTR	1 cut(s)	1467
BsaI	GGTCTC	2 cut(s)	427, 1289
BsaJI	CCNNGG	2 cut(s)	1299, 1422
Bsc4I	CCNNNNNNNGG	2 cut(s)	1117, 1929
Bse118I	RCCGGY	1 cut(s)	1336
Bse1I	ACTGG	2 cut(s)	1088, 1363
Bse3DI	GCAATG	4 cut(s)	402, 727, 1518, 1536
BseBI	CCWGG	1 cut(s)	1301
BseDI	CCNNGG	2 cut(s)	1299, 1422
BseGI	GGATG	5 cut(s)	408, 637, 904, 1402, 1766
BseLI	CCNNNNNNNGG	2 cut(s)	1117, 1929
BseMI	GCAATG	4 cut(s)	402, 727, 1518, 1536
BseMII	CTCAG	5 cut(s)	318, 714, 1032, 1045, 1055
BseNI	ACTGG	2 cut(s)	1088, 1363
BseSI	GKGCMC	2 cut(s)	304, 1063
BseXI	GCAGC	7 cut(s)	221, 847, 987, 1520, 1538, 1828, 1845
BsgI	GTGCAG	1 cut(s)	1005
Bsh1285I	CGRYCG	1 cut(s)	1852
BshFI	GGCC	3 cut(s)	692, 1036, 1933
BsiEI	CGRYCG	1 cut(s)	1852
BsiHKAI	GWGCWC	1 cut(s)	1063
BsiHKCI	CYCGRG	1 cut(s)	1674
BsiSI	CCGG	3 cut(s)	121, 907, 1337
BslFI	GGGAC	3 cut(s)	67, 150, 1854
BslI	CCNNNNNNNGG	2 cut(s)	1117, 1929
BsmAI	GTCTC	2 cut(s)	427, 1289
BsmFI	GGGAC	3 cut(s)	67, 150, 1854
BsmI	GAATGC	1 cut(s)	997
BsnI	GGCC	3 cut(s)	692, 1036, 1933
Bso31I	GGTCTC	2 cut(s)	427, 1289
BsoBI	CYCGRG	1 cut(s)	1674
Bsp119I	TTCGAA	1 cut(s)	410
Bsp1286I	GDGCHC	2 cut(s)	304, 1063
Bsp143I	GATC	6 cut(s)	513, 671, 697, 759, 1440, 1807
Bsp19I	CCATGG	1 cut(s)	1422
BspACI	CCGC	4 cut(s)	902, 1451, 1643, 1852
BspANI	GGCC	3 cut(s)	692, 1036, 1933
BspCNI	CTCAG	5 cut(s)	319, 715, 1033, 1044, 1056
BspMI	ACCTGC	2 cut(s)	298, 1456
BspOI	GCTAGC	1 cut(s)	1673
BspPI	GGATC	1 cut(s)	1448
BspQI	GCTCTTC	1 cut(s)	1449
BspT104I	TTCGAA	1 cut(s)	410
BspTNI	GGTCTC	2 cut(s)	427, 1289
BsrDI	GCAATG	4 cut(s)	402, 727, 1518, 1536
BsrFI	RCCGGY	1 cut(s)	1336
BsrI	ACTGG	2 cut(s)	1088, 1363
BssAI	RCCGGY	1 cut(s)	1336
BssECI	CCNNGG	2 cut(s)	1299, 1422
BssMI	GATC	6 cut(s)	513, 671, 697, 759, 1440, 1807
BssNAI	GTATAC	1 cut(s)	1955
BssSI	CACGAG	2 cut(s)	1488, 1935
BssT1I	CCWWGG	1 cut(s)	1422
Bst1107I	GTATAC	1 cut(s)	1955
Bst2BI	CACGAG	2 cut(s)	1488, 1935
Bst2UI	CCWGG	1 cut(s)	1301
Bst4CI	ACNGT	2 cut(s)	77, 757
Bst6I	CTCTTC	1 cut(s)	1449
BstAPI	GCANNNNNTGC	1 cut(s)	992
BstBAI	YACGTR	1 cut(s)	1467
BstBI	TTCGAA	1 cut(s)	410
BstC8I	GCNNGC	3 cut(s)	1338, 1375, 1671
BstDEI	CTNAG	7 cut(s)	327, 723, 923, 1031, 1041, 1052, 1064
BstDSI	CCRYGG	1 cut(s)	1422
BstF5I	GGATG	5 cut(s)	408, 637, 904, 1402, 1766
BstHHI	GCGC	1 cut(s)	482
BstKTI	GATC	6 cut(s)	516, 674, 700, 762, 1443, 1810
BstMAI	GTCTC	2 cut(s)	427, 1289
BstMBI	GATC	6 cut(s)	513, 671, 697, 759, 1440, 1807
BstMCI	CGRYCG	1 cut(s)	1852
BstMWI	GCNNNNNNNGC	4 cut(s)	488, 992, 1009, 1154
BstNI	CCWGG	1 cut(s)	1301
BstNSI	RCATGY	3 cut(s)	119, 874, 1790
BstSCI	CCNGG	2 cut(s)	119, 1299
BstSLI	GKGCMC	2 cut(s)	304, 1063
BstV1I	GCAGC	7 cut(s)	221, 847, 987, 1520, 1538, 1828, 1845
BstXI	CCANNNNNNTGG	1 cut(s)	1264
BstZ17I	GTATAC	1 cut(s)	1955
BsuRI	GGCC	3 cut(s)	692, 1036, 1933
BtgI	CCRYGG	1 cut(s)	1422
BtrI	CACGTC	1 cut(s)	103
BtsCI	GGATG	5 cut(s)	408, 637, 904, 1402, 1766
BtsI	GCAGTG	1 cut(s)	1063
BtsIMutI	CAGTG	4 cut(s)	73, 720, 1061, 1063
BveI	ACCTGC	2 cut(s)	298, 1456
Cac8I	GCNNGC	3 cut(s)	1338, 1375, 1671
CfoI	GCGC	1 cut(s)	482
Cfr10I	RCCGGY	1 cut(s)	1336
Cfr13I	GGNCC	3 cut(s)	904, 1419, 1931
CpoI	CGGWCCG	1 cut(s)	904
Csp6I	GTAC	2 cut(s)	445, 545
CspI	CGGWCCG	1 cut(s)	904
CviQI	GTAC	2 cut(s)	445, 545
DdeI	CTNAG	7 cut(s)	327, 723, 923, 1031, 1041, 1052, 1064
DpnI	GATC	6 cut(s)	515, 673, 699, 761, 1442, 1809
DpnII	GATC	6 cut(s)	513, 671, 697, 759, 1440, 1807
EaeI	YGGCCR	1 cut(s)	690
Eam1104I	CTCTTC	1 cut(s)	1449
EarI	CTCTTC	1 cut(s)	1449
Eco130I	CCWWGG	1 cut(s)	1422
Eco31I	GGTCTC	2 cut(s)	427, 1289
Eco32I	GATATC	2 cut(s)	750, 1245
Eco47I	GGWCC	2 cut(s)	904, 1419
Eco88I	CYCGRG	1 cut(s)	1674
EcoRI	GAATTC	2 cut(s)	349, 553
EcoRII	CCWGG	1 cut(s)	1299
EcoRV	GATATC	2 cut(s)	750, 1245
EcoT14I	CCWWGG	1 cut(s)	1422
EcoT22I	ATGCAT	1 cut(s)	211
ErhI	CCWWGG	1 cut(s)	1422
FalI	AAGNNNNNCTT	2 cut(s)	1118, 1150
FaqI	GGGAC	3 cut(s)	67, 150, 1854
FbaI	TGATCA	2 cut(s)	513, 759
FblI	GTMKAC	1 cut(s)	1954
Fnu4HI	GCNGC	7 cut(s)	235, 861, 1001, 1509, 1527, 1817, 1834
FokI	GGATG	5 cut(s)	415, 644, 911, 1409, 1773
Fsp4HI	GCNGC	7 cut(s)	235, 861, 1001, 1509, 1527, 1817, 1834
FspBI	CTAG	4 cut(s)	252, 1158, 1545, 1670
GlaI	GCGC	1 cut(s)	481
GluI	GCNGC	7 cut(s)	235, 861, 1001, 1509, 1527, 1817, 1834
GsuI	CTGGAG	2 cut(s)	1380, 1876
HaeIII	GGCC	3 cut(s)	692, 1036, 1933
HapII	CCGG	3 cut(s)	121, 907, 1337
HhaI	GCGC	1 cut(s)	482
Hin6I	GCGC	1 cut(s)	480
HinP1I	GCGC	1 cut(s)	480
HincII	GTYRAC	1 cut(s)	1485
HindII	GTYRAC	1 cut(s)	1485
HinfI	GANTC	9 cut(s)	138, 831, 935, 1027, 1139, 1486, 1562, 1585, 1711
HpaII	CCGG	3 cut(s)	121, 907, 1337
HphI	GGTGA	2 cut(s)	88, 1243
Hpy188I	TCNGA	3 cut(s)	1144, 1639, 1760
Hpy188III	TCNNGA	4 cut(s)	173, 265, 517, 917
Hpy99I	CGWCG	1 cut(s)	179
HpyAV	CCTTC	6 cut(s)	103, 262, 514, 616, 1322, 1423
HpyCH4III	ACNGT	2 cut(s)	77, 757
HpyCH4IV	ACGT	7 cut(s)	102, 177, 369, 449, 1347, 1466, 1951
HpyF10VI	GCNNNNNNNGC	4 cut(s)	488, 992, 1009, 1154
HpyF3I	CTNAG	7 cut(s)	327, 723, 923, 1031, 1041, 1052, 1064
HpySE526I	ACGT	7 cut(s)	102, 177, 369, 449, 1347, 1466, 1951
HspAI	GCGC	1 cut(s)	480
KroI	GCCGGC	1 cut(s)	1336
KroNI	GCCGGC	1 cut(s)	1338
Ksp22I	TGATCA	2 cut(s)	513, 759
Kzo9I	GATC	6 cut(s)	513, 671, 697, 759, 1440, 1807
LguI	GCTCTTC	1 cut(s)	1449
LmnI	GCTCC	1 cut(s)	1386
Lsp1109I	GCAGC	7 cut(s)	221, 847, 987, 1520, 1538, 1828, 1845
LweI	GCATC	4 cut(s)	196, 889, 1135, 1828
MaeI	CTAG	4 cut(s)	252, 1158, 1545, 1670
MaeII	ACGT	7 cut(s)	102, 177, 369, 449, 1347, 1466, 1951
MaeIII	GTNAC	7 cut(s)	365, 773, 1348, 1717, 1867, 1875, 1939
MalI	GATC	6 cut(s)	515, 673, 699, 761, 1442, 1809
MboI	GATC	6 cut(s)	513, 671, 697, 759, 1440, 1807
MboII	GAAGA	5 cut(s)	695, 1076, 1466, 1707, 1908
MfeI	CAATTG	1 cut(s)	1811
MhlI	GDGCHC	2 cut(s)	304, 1063
MlsI	TGGCCA	1 cut(s)	692
MluNI	TGGCCA	1 cut(s)	692
MlyI	GAGTC	3 cut(s)	132, 1148, 1480
MmeI	TCCRAC	3 cut(s)	326, 1738, 1748
MnlI	CCTC	8 cut(s)	52, 95, 291, 619, 889, 1393, 1685, 1820
Mox20I	TGGCCA	1 cut(s)	692
Mph1103I	ATGCAT	1 cut(s)	211
MroNI	GCCGGC	1 cut(s)	1336
MroXI	GAANNNNTTC	1 cut(s)	260
MscI	TGGCCA	1 cut(s)	692
MseI	TTAA	4 cut(s)	1125, 1193, 1355, 1800
MslI	CAYNNNNRTG	2 cut(s)	981, 1262
Msp20I	TGGCCA	1 cut(s)	692
MspA1I	CMGCKG	1 cut(s)	1854
MspI	CCGG	3 cut(s)	121, 907, 1337
MspR9I	CCNGG	2 cut(s)	121, 1301
MunI	CAATTG	1 cut(s)	1811
Mva1269I	GAATGC	1 cut(s)	997
MvaI	CCWGG	1 cut(s)	1301
MwoI	GCNNNNNNNGC	4 cut(s)	488, 992, 1009, 1154
NaeI	GCCGGC	1 cut(s)	1338
NciI	CCSGG	1 cut(s)	121
NcoI	CCATGG	1 cut(s)	1422
NdeII	GATC	6 cut(s)	513, 671, 697, 759, 1440, 1807
NgoMIV	GCCGGC	1 cut(s)	1336
NheI	GCTAGC	1 cut(s)	1669
NmuCI	GTSAC	3 cut(s)	1867, 1875, 1939
NsiI	ATGCAT	1 cut(s)	211
NspI	RCATGY	3 cut(s)	119, 874, 1790
NspV	TTCGAA	1 cut(s)	410
PaeR7I	CTCGAG	1 cut(s)	1674
PaqCI	CACCTGC	1 cut(s)	298
PciI	ACATGT	2 cut(s)	870, 1786
PciSI	GCTCTTC	1 cut(s)	1449
PctI	GAATGC	1 cut(s)	997
PdiI	GCCGGC	1 cut(s)	1338
PdmI	GAANNNNTTC	1 cut(s)	260
PfeI	GAWTC	6 cut(s)	831, 935, 1027, 1562, 1585, 1711
PkrI	GCNGC	7 cut(s)	236, 862, 1002, 1510, 1528, 1818, 1835
PleI	GAGTC	3 cut(s)	132, 1147, 1480
PpsI	GAGTC	3 cut(s)	132, 1147, 1480
Ppu21I	YACGTR	1 cut(s)	1467
PscI	ACATGT	2 cut(s)	870, 1786
PshBI	ATTAAT	1 cut(s)	1193
Psp6I	CCWGG	1 cut(s)	1299
PspGI	CCWGG	1 cut(s)	1299
PspPI	GGNCC	3 cut(s)	904, 1419, 1931
PspXI	VCTCGAGB	1 cut(s)	1674
RsaI	GTAC	2 cut(s)	446, 546
RsaNI	GTAC	2 cut(s)	445, 545
RseI	CAYNNNNRTG	2 cut(s)	981, 1262
Rsr2I	CGGWCCG	1 cut(s)	904
RsrII	CGGWCCG	1 cut(s)	904
SapI	GCTCTTC	1 cut(s)	1449
SaqAI	TTAA	4 cut(s)	1125, 1193, 1355, 1800
SatI	GCNGC	7 cut(s)	235, 861, 1001, 1509, 1527, 1817, 1834
Sau3AI	GATC	6 cut(s)	513, 671, 697, 759, 1440, 1807
Sau96I	GGNCC	3 cut(s)	904, 1419, 1931
SchI	GAGTC	3 cut(s)	132, 1148, 1480
ScrFI	CCNGG	2 cut(s)	121, 1301
SduI	GDGCHC	2 cut(s)	304, 1063
SfaNI	GCATC	4 cut(s)	196, 889, 1135, 1828
Sfr274I	CTCGAG	1 cut(s)	1674
SfuI	TTCGAA	1 cut(s)	410
SinI	GGWCC	2 cut(s)	904, 1419
SlaI	CTCGAG	1 cut(s)	1674
SmiMI	CAYNNNNRTG	2 cut(s)	981, 1262
SmlI	CTYRAG	2 cut(s)	1018, 1674
SmoI	CTYRAG	2 cut(s)	1018, 1674
SsiI	CCGC	4 cut(s)	902, 1451, 1643, 1852
SspI	AATATT	1 cut(s)	1413
SspMI	CTAG	4 cut(s)	252, 1158, 1545, 1670
StyD4I	CCNGG	2 cut(s)	119, 1299
StyI	CCWWGG	1 cut(s)	1422
TaaI	ACNGT	2 cut(s)	77, 757
TaiI	ACGT	7 cut(s)	105, 180, 372, 452, 1350, 1469, 1954
TaqII	GACCGA	1 cut(s)	451
TatI	WGTACW	1 cut(s)	444
TfiI	GAWTC	6 cut(s)	831, 935, 1027, 1562, 1585, 1711
Tru1I	TTAA	4 cut(s)	1125, 1193, 1355, 1800
Tru9I	TTAA	4 cut(s)	1125, 1193, 1355, 1800
TscAI	CASTG	4 cut(s)	80, 727, 1063, 1068
TseFI	GTSAC	3 cut(s)	1867, 1875, 1939
TseI	GCWGC	7 cut(s)	234, 860, 1000, 1508, 1526, 1816, 1833
Tsp45I	GTSAC	3 cut(s)	1867, 1875, 1939
TspRI	CASTG	4 cut(s)	80, 727, 1063, 1068
VneI	GTGCAC	1 cut(s)	1059
VpaK11BI	GGWCC	2 cut(s)	904, 1419
VspI	ATTAAT	1 cut(s)	1193
XapI	RAATTY	2 cut(s)	349, 553
XceI	RCATGY	3 cut(s)	119, 874, 1790
XhoI	CTCGAG	1 cut(s)	1674
XmiI	GTMKAC	1 cut(s)	1954
XmnI	GAANNNNTTC	1 cut(s)	260
XspI	CTAG	4 cut(s)	252, 1158, 1545, 1670
Zsp2I	ATGCAT	1 cut(s)	211

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.