MD10G1098500.v1.1

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
15835871 .. 15839206
3336 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1098500.v1.1.491

Sequence Viewer

Length: 1422 bp
ATGGGATCTCAAACTCCTCTCCCTCATATTTTTCTTGTGTGTTTTCCAGCACAAGGACACATAAACCCTATGCTCAGATTAGGCAAACGCCTAGCTTCAAAGGGCATGTTGGTAAGTTTCTCCACCACAGAAAACTATGGCAAAGAGATGAGAAAGGCCAACGATGGCATCAGTGACCAACCTACACCAGTCGGCAATGGTTTCATCAGGTTTGAGTTTTTTGACGACGGGCTAGCGGAAGATGATCCGAAATTCTCGAAGTTGGAAGAATATATGCCTCTGCTTGAACTTGTGGGCAAGGATCTGGTAACACAGATGATCAAACGACATGCCAATGAAGGTCGTCCAGTTTCATGCCTGGTGAACAATCCGTTCATTCCTTGGGTTTGTGATGTTGCCACCGAGCATGGGATCCCTCGTGCCACGCTTTGGATTCAGTCTTGTGCTGTGTTCTCGGCCTATTACCATTGCCACAACAAGATGGTGCCGTTTCCGACAGAGGCTGAGCCGATTATCGATATCCAGCTTCCTGGTATGCCTGTTCTGAAGCATGATGAGATTCCCAGCTTCTTACTCCCTTCTGATCCATTTCAGGTTTTGGGGAGGGCAATATTAGGACAGTTCAAGAAGTTATCCAAATCACTCTATGTGTTGATGGACACATTCCAGGAGTTGGAGCCAGAAATAATTGAGCACATGTCCCAGGTGTGCATAGTGAAGCCCGTTGGCCCCTTATTCAAAAACCCTAAAGCTCCAAAAACAAGCATCGGAGGTGACTTAATGAAAGCCGATGATTGCTTTGAGTGGCTTGACTCAAAGCCCCCAACATCTGCCGTGTACGTATCTTTTGGTAGCATCGTGCACTTAAAGCAAGAGCAAGTTGACGAGATTGCTCATGGCCTACTGAGTTCTGGGGTCTCGTTTTTATGGGCTATGAAGCCACCTGGCAAAGCATTCGGATCGGAAAAACATGTTTTGCCAGATGGGTTTTTGGAAAAAGTTGGTGACAAGGGAAAAGTGGTGCAGTGGAGTCCACAAGAGCAAGTTCTAGCTCACCCATCGGTTGCATGTTTTCTTACTCACTGTGGCTGGAACTCTTCAGTCGAAGCACTAACTTCCGGCGTGCCACTTGTGACATTTCCTCAATGGGGCGACCAAGTCACCAATTCAAAGTTCTTGGTGGATGTGTTTGGTGTGGGGCTCAGATTGTGTCGTGGAAGAGCTGAAAATAGATTGATCACGAGAGACGAGGTTGCGAAGTGTTTGTTGGAGGCAACCGTGGGAGAGAAGGCGAACGAACTGAAGCAAAACGCTTTGAAATGGAAGAAGGCGGCAGAGGAAGCGGTGGCTGAGGGTGGCTCCTCTGACCGGAGTCTTGAAGATTTTATAGACGAGATTAGCAAGATCACGTATGTTGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

474

Amino Acids

52.35

Weight (kDa)

5.77

Isoelectric Point (pI)

40.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 10 - 59 9.7e-07 Glycosyltransferase, N-terminal domain
UDPGT PF00201 269 - 396 3.2e-22 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 484
AccB7I CCANNNNNTGG 2 cut(s) 429, 673
AciI CCGC 3 cut(s) 236, 1331, 1343
AclWI GGATC 7 cut(s) 13, 239, 309, 406, 419, 578, 967
AcsI RAATTY 1 cut(s) 251
AcuI CTGAAG 3 cut(s) 566, 1083, 1322
AfaI GTAC 1 cut(s) 839
AfiI CCNNNNNNNGG 6 cut(s) 53, 408, 429, 673, 1148, 1368
AflIII ACRYGT 2 cut(s) 696, 970
AgsI TTSAA 7 cut(s) 99, 287, 625, 739, 1170, 1318, 1379
AjnI CCWGG 5 cut(s) 357, 529, 666, 702, 943
AjuI GAANNNNNNNTTGG 4 cut(s) 1157, 1189, 1250, 1282
AluBI AGCT 6 cut(s) 95, 526, 567, 752, 1052, 1223
AluI AGCT 6 cut(s) 95, 526, 567, 752, 1052, 1223
Alw21I GWGCWC 2 cut(s) 696, 864
Alw26I GTCTC 2 cut(s) 922, 1239
Alw44I GTGCAC 1 cut(s) 860
AlwI GGATC 7 cut(s) 13, 239, 309, 406, 419, 578, 967
AlwNI CAGNNNCTG 1 cut(s) 503
AoxI GGCC 4 cut(s) 156, 456, 727, 898
ApaLI GTGCAC 1 cut(s) 860
ApoI RAATTY 1 cut(s) 251
AspS9I GGNCC 1 cut(s) 728
AsuHPI GGTGA 5 cut(s) 373, 785, 1016, 1046, 1153
AsuNHI GCTAGC 1 cut(s) 232
BaeGI GKGCMC 1 cut(s) 864
BamHI GGATCC 1 cut(s) 411
BanI GGYRCC 1 cut(s) 484
BanII GRGCYC 1 cut(s) 1203
BauI CACGAG 2 cut(s) 417, 1240
Bbv12I GWGCWC 2 cut(s) 696, 864
BbvCI CCTCAGC 1 cut(s) 1350
BccI CCATC 5 cut(s) 158, 475, 649, 977, 1066
BceAI ACGGC 2 cut(s) 472, 818
BcgI CGANNNNNNTGC 4 cut(s) 937, 942, 971, 976
BciT130I CCWGG 5 cut(s) 359, 531, 668, 704, 945
BclI TGATCA 2 cut(s) 318, 1236
BcoDI GTCTC 2 cut(s) 922, 1239
BfaI CTAG 4 cut(s) 92, 233, 1049, 1420
BisI GCNGC 1 cut(s) 1332
BlpI GCTNAGC 1 cut(s) 504
BlsI GCNGC 1 cut(s) 1333
Bme1390I CCNGG 5 cut(s) 359, 531, 668, 704, 945
BmgT120I GGNCC 1 cut(s) 728
BmiI GGNNCC 5 cut(s) 413, 486, 678, 730, 1360
BmrFI CCNGG 5 cut(s) 359, 531, 668, 704, 945
BmsI GCATC 3 cut(s) 177, 774, 864
BmtI GCTAGC 1 cut(s) 236
BoxI GACNNNNGTC 1 cut(s) 1371
BplI GAGNNNNNCTC 2 cut(s) 1343, 1375
Bpu10I CCTNAGC 1 cut(s) 1350
Bpu1102I GCTNAGC 1 cut(s) 504
Bsa29I ATCGAT 1 cut(s) 516
BsaAI YACGTR 2 cut(s) 841, 1410
BsaI GGTCTC 1 cut(s) 922
BsaJI CCNNGG 3 cut(s) 380, 702, 1278
BsaWI WCCGGW 1 cut(s) 1368
Bsc4I CCNNNNNNNGG 6 cut(s) 53, 408, 429, 673, 1148, 1368
Bse1I ACTGG 2 cut(s) 188, 347
Bse3DI GCAATG 2 cut(s) 202, 466
BseBI CCWGG 5 cut(s) 359, 531, 668, 704, 945
BseCI ATCGAT 1 cut(s) 516
BseDI CCNNGG 3 cut(s) 380, 702, 1278
BseGI GGATG 1 cut(s) 1189
BseLI CCNNNNNNNGG 6 cut(s) 53, 408, 429, 673, 1148, 1368
BseMI GCAATG 2 cut(s) 202, 466
BseMII CTCAG 5 cut(s) 88, 495, 896, 1216, 1341
BseNI ACTGG 2 cut(s) 188, 347
BseRI GAGGAG 2 cut(s) 6, 1351
BseSI GKGCMC 1 cut(s) 864
BseYI CCCAGC 1 cut(s) 563
BsgI GTGCAG 1 cut(s) 1043
BshFI GGCC 4 cut(s) 158, 458, 729, 900
BshNI GGYRCC 1 cut(s) 484
BshVI ATCGAT 1 cut(s) 516
BsiHKAI GWGCWC 2 cut(s) 696, 864
BsiSI CCGG 2 cut(s) 1119, 1369
BslFI GGGAC 1 cut(s) 685
BslI CCNNNNNNNGG 6 cut(s) 53, 408, 429, 673, 1148, 1368
BsmAI GTCTC 2 cut(s) 922, 1239
BsmBI CGTCTC 1 cut(s) 1239
BsmFI GGGAC 1 cut(s) 685
BsmI GAATGC 1 cut(s) 953
BsnI GGCC 4 cut(s) 158, 458, 729, 900
Bso31I GGTCTC 1 cut(s) 922
Bsp1286I GDGCHC 3 cut(s) 696, 864, 1203
Bsp143I GATC 9 cut(s) 5, 244, 301, 318, 411, 583, 959, 1236, 1404
Bsp1720I GCTNAGC 1 cut(s) 504
BspACI CCGC 3 cut(s) 236, 1331, 1343
BspANI GGCC 4 cut(s) 158, 458, 729, 900
BspCNI CTCAG 5 cut(s) 87, 496, 897, 1215, 1342
BspDI ATCGAT 1 cut(s) 516
BspLI GGNNCC 5 cut(s) 413, 486, 678, 730, 1360
BspOI GCTAGC 1 cut(s) 236
BspPI GGATC 7 cut(s) 13, 239, 309, 406, 419, 578, 967
BspQI GCTCTTC 1 cut(s) 1213
BspT107I GGYRCC 1 cut(s) 484
BspTNI GGTCTC 1 cut(s) 922
BsrDI GCAATG 2 cut(s) 202, 466
BsrI ACTGG 2 cut(s) 188, 347
BssECI CCNNGG 3 cut(s) 380, 702, 1278
BssMI GATC 9 cut(s) 5, 244, 301, 318, 411, 583, 959, 1236, 1404
BssSI CACGAG 2 cut(s) 417, 1240
BssT1I CCWWGG 1 cut(s) 380
Bst2BI CACGAG 2 cut(s) 417, 1240
Bst2UI CCWGG 5 cut(s) 359, 531, 668, 704, 945
Bst4CI ACNGT 3 cut(s) 621, 1085, 1279
Bst6I CTCTTC 2 cut(s) 1102, 1213
BstBAI YACGTR 2 cut(s) 841, 1410
BstC8I GCNNGC 2 cut(s) 234, 1124
BstDEI CTNAG 5 cut(s) 74, 504, 905, 1202, 1350
BstDSI CCRYGG 1 cut(s) 1278
BstF5I GGATG 1 cut(s) 1189
BstKTI GATC 9 cut(s) 8, 247, 304, 321, 414, 586, 962, 1239, 1407
BstMAI GTCTC 2 cut(s) 922, 1239
BstMBI GATC 9 cut(s) 5, 244, 301, 318, 411, 583, 959, 1236, 1404
BstMWI GCNNNNNNNGC 2 cut(s) 868, 1340
BstNI CCWGG 5 cut(s) 359, 531, 668, 704, 945
BstNSI RCATGY 5 cut(s) 109, 332, 700, 974, 1071
BstPAI GACNNNNGTC 1 cut(s) 1371
BstSCI CCNGG 5 cut(s) 357, 529, 666, 702, 943
BstSLI GKGCMC 1 cut(s) 864
BstSNI TACGTA 1 cut(s) 841
BstX2I RGATCY 3 cut(s) 5, 301, 411
BstXI CCANNNNNNTGG 1 cut(s) 530
BstYI RGATCY 3 cut(s) 5, 301, 411
Bsu15I ATCGAT 1 cut(s) 516
BsuRI GGCC 4 cut(s) 158, 458, 729, 900
BsuTUI ATCGAT 1 cut(s) 516
BtgI CCRYGG 1 cut(s) 1278
BtsCI GGATG 1 cut(s) 1189
BtsI GCAGTG 1 cut(s) 1031
BtsIMutI CAGTG 3 cut(s) 178, 1031, 1081
Cac8I GCNNGC 2 cut(s) 234, 1124
CaiI CAGNNNCTG 1 cut(s) 503
Cfr13I GGNCC 1 cut(s) 728
ClaI ATCGAT 1 cut(s) 516
Csp6I GTAC 1 cut(s) 838
CviAII CATG 9 cut(s) 106, 329, 354, 407, 551, 697, 896, 971, 1068
CviQI GTAC 1 cut(s) 838
DdeI CTNAG 5 cut(s) 74, 504, 905, 1202, 1350
DpnI GATC 9 cut(s) 7, 246, 303, 320, 413, 585, 961, 1238, 1406
DpnII GATC 9 cut(s) 5, 244, 301, 318, 411, 583, 959, 1236, 1404
Eam1104I CTCTTC 2 cut(s) 1102, 1213
EarI CTCTTC 2 cut(s) 1102, 1213
Eco105I TACGTA 1 cut(s) 841
Eco130I CCWWGG 1 cut(s) 380
Eco24I GRGCYC 1 cut(s) 1203
Eco31I GGTCTC 1 cut(s) 922
Eco32I GATATC 1 cut(s) 520
Eco57I CTGAAG 3 cut(s) 566, 1083, 1322
EcoRII CCWGG 5 cut(s) 357, 529, 666, 702, 943
EcoRV GATATC 1 cut(s) 520
EcoT14I CCWWGG 1 cut(s) 380
EcoT38I GRGCYC 1 cut(s) 1203
ErhI CCWWGG 1 cut(s) 380
Esp3I CGTCTC 1 cut(s) 1239
FaeI CATG 9 cut(s) 109, 332, 357, 410, 554, 700, 899, 974, 1071
FaqI GGGAC 1 cut(s) 685
FatI CATG 9 cut(s) 105, 328, 353, 406, 550, 696, 895, 970, 1067
FbaI TGATCA 2 cut(s) 318, 1236
Fnu4HI GCNGC 1 cut(s) 1332
FokI GGATG 1 cut(s) 1196
FriOI GRGCYC 1 cut(s) 1203
Fsp4HI GCNGC 1 cut(s) 1332
FspBI CTAG 4 cut(s) 92, 233, 1049, 1420
GluI GCNGC 1 cut(s) 1332
GsaI CCCAGC 1 cut(s) 567
HaeIII GGCC 4 cut(s) 158, 458, 729, 900
HapII CCGG 2 cut(s) 1119, 1369
Hin1II CATG 9 cut(s) 109, 332, 357, 410, 554, 700, 899, 974, 1071
HincII GTYRAC 1 cut(s) 883
HindII GTYRAC 1 cut(s) 883
HinfI GANTC 5 cut(s) 433, 559, 812, 1030, 1372
HpaII CCGG 2 cut(s) 1119, 1369
HphI GGTGA 5 cut(s) 373, 785, 1016, 1046, 1153
Hpy166II GTNNAC 5 cut(s) 364, 838, 862, 883, 1034
Hpy188III TCNNGA 4 cut(s) 256, 625, 1240, 1376
Hpy8I GTNNAC 5 cut(s) 364, 838, 862, 883, 1034
Hpy99I CGWCG 1 cut(s) 230
HpyAV CCTTC 4 cut(s) 332, 588, 1282, 1321
HpyCH4III ACNGT 3 cut(s) 621, 1085, 1279
HpyCH4IV ACGT 2 cut(s) 840, 1409
HpyCH4V TGCA 4 cut(s) 711, 862, 1024, 1067
HpyF10VI GCNNNNNNNGC 2 cut(s) 868, 1340
HpyF3I CTNAG 5 cut(s) 74, 504, 905, 1202, 1350
HpySE526I ACGT 2 cut(s) 840, 1409
Hsp92II CATG 9 cut(s) 109, 332, 357, 410, 554, 700, 899, 974, 1071
Ksp22I TGATCA 2 cut(s) 318, 1236
Kzo9I GATC 9 cut(s) 5, 244, 301, 318, 411, 583, 959, 1236, 1404
LguI GCTCTTC 1 cut(s) 1213
LmnI GCTCC 3 cut(s) 676, 757, 1364
LweI GCATC 3 cut(s) 177, 774, 864
MaeI CTAG 4 cut(s) 92, 233, 1049, 1420
MaeII ACGT 2 cut(s) 840, 1409
MaeIII GTNAC 6 cut(s) 173, 307, 773, 1004, 1132, 1159
MalI GATC 9 cut(s) 7, 246, 303, 320, 413, 585, 961, 1238, 1406
MboI GATC 9 cut(s) 5, 244, 301, 318, 411, 583, 959, 1236, 1404
MboII GAAGA 6 cut(s) 251, 278, 1089, 1230, 1336, 1391
MflI RGATCY 3 cut(s) 5, 301, 411
MhlI GDGCHC 3 cut(s) 696, 864, 1203
MluCI AATT 3 cut(s) 251, 687, 1165
MlyI GAGTC 3 cut(s) 806, 1039, 1381
MmeI TCCRAC 4 cut(s) 243, 518, 654, 1248
MseI TTAA 2 cut(s) 779, 866
MslI CAYNNNNRTG 1 cut(s) 333
MspI CCGG 2 cut(s) 1119, 1369
MspR9I CCNGG 5 cut(s) 359, 531, 668, 704, 945
Mva1269I GAATGC 1 cut(s) 953
MvaI CCWGG 5 cut(s) 359, 531, 668, 704, 945
MwoI GCNNNNNNNGC 2 cut(s) 868, 1340
NdeII GATC 9 cut(s) 5, 244, 301, 318, 411, 583, 959, 1236, 1404
NheI GCTAGC 1 cut(s) 232
NlaIII CATG 9 cut(s) 109, 332, 357, 410, 554, 700, 899, 974, 1071
NlaIV GGNNCC 5 cut(s) 413, 486, 678, 730, 1360
NmeAIII GCCGAG 1 cut(s) 434
NmuCI GTSAC 5 cut(s) 173, 773, 1004, 1132, 1159
NspI RCATGY 5 cut(s) 109, 332, 700, 974, 1071
PciI ACATGT 2 cut(s) 696, 970
PciSI GCTCTTC 1 cut(s) 1213
PctI GAATGC 1 cut(s) 953
PfeI GAWTC 2 cut(s) 433, 559
PflFI GACNNNGTC 1 cut(s) 1157
PflMI CCANNNNNTGG 2 cut(s) 429, 673
PfoI TCCNGGA 1 cut(s) 666
PkrI GCNGC 1 cut(s) 1333
PleI GAGTC 3 cut(s) 806, 1038, 1380
PpsI GAGTC 3 cut(s) 806, 1038, 1380
Ppu21I YACGTR 2 cut(s) 841, 1410
PscI ACATGT 2 cut(s) 696, 970
PshAI GACNNNNGTC 1 cut(s) 1371
Psp6I CCWGG 5 cut(s) 357, 529, 666, 702, 943
PspFI CCCAGC 1 cut(s) 563
PspGI CCWGG 5 cut(s) 357, 529, 666, 702, 943
PspN4I GGNNCC 5 cut(s) 413, 486, 678, 730, 1360
PspPI GGNCC 1 cut(s) 728
PstNI CAGNNNCTG 1 cut(s) 503
PsuI RGATCY 3 cut(s) 5, 301, 411
PsyI GACNNNGTC 1 cut(s) 1157
RsaI GTAC 1 cut(s) 839
RsaNI GTAC 1 cut(s) 838
RseI CAYNNNNRTG 1 cut(s) 333
SapI GCTCTTC 1 cut(s) 1213
SaqAI TTAA 2 cut(s) 779, 866
SatI GCNGC 1 cut(s) 1332
Sau3AI GATC 9 cut(s) 5, 244, 301, 318, 411, 583, 959, 1236, 1404
Sau96I GGNCC 1 cut(s) 728
SchI GAGTC 3 cut(s) 806, 1039, 1381
ScrFI CCNGG 5 cut(s) 359, 531, 668, 704, 945
SduI GDGCHC 3 cut(s) 696, 864, 1203
SfaNI GCATC 3 cut(s) 177, 774, 864
SmiMI CAYNNNNRTG 1 cut(s) 333
SnaBI TACGTA 1 cut(s) 841
Sse9I AATT 3 cut(s) 251, 687, 1165
SsiI CCGC 3 cut(s) 236, 1331, 1343
SspI AATATT 1 cut(s) 612
SspMI CTAG 4 cut(s) 92, 233, 1049, 1420
StyD4I CCNGG 5 cut(s) 357, 529, 666, 702, 943
StyI CCWWGG 1 cut(s) 380
TaaI ACNGT 3 cut(s) 621, 1085, 1279
TaiI ACGT 2 cut(s) 843, 1412
TaqI TCGA 3 cut(s) 257, 516, 1104
TasI AATT 3 cut(s) 251, 687, 1165
TauI GCSGC 1 cut(s) 1334
TfiI GAWTC 2 cut(s) 433, 559
Tru1I TTAA 2 cut(s) 779, 866
Tru9I TTAA 2 cut(s) 779, 866
TscAI CASTG 3 cut(s) 178, 1031, 1088
TseFI GTSAC 5 cut(s) 173, 773, 1004, 1132, 1159
Tsp45I GTSAC 5 cut(s) 173, 773, 1004, 1132, 1159
TspDTI ATGAA 6 cut(s) 193, 342, 351, 364, 797, 950
TspGWI ACGGA 1 cut(s) 360
TspRI CASTG 3 cut(s) 178, 1031, 1088
Tth111I GACNNNGTC 1 cut(s) 1157
Van91I CCANNNNNTGG 2 cut(s) 429, 673
VneI GTGCAC 1 cut(s) 860
XapI RAATTY 1 cut(s) 251
XceI RCATGY 5 cut(s) 109, 332, 700, 974, 1071
XspI CTAG 4 cut(s) 92, 233, 1049, 1420
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.