Rmu_sc0000016.1_g000013

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000016.1
Physical Location & Seq
Reverse (-)
63337 .. 64872
1536 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000016.1_g000013.1.cds

Sequence Viewer

Length: 1356 bp
atgctgcggttaggcaaacatctagcttccaagggtttgttggtcactttctccaccactgaagattatgggaataagatgagaaaggctaatggcatcgtcgacaaccaaccttcaccagttggcaatggatttatcaggttcgagttctttgacgacgggcttcctgaccccgaggatccgaggcgaacccagttggacttctacatcccacttcttgagaaagtagggaaggagttggtgactgggatgataaacaagcatggtgaggaaggtggtgtaagagtttcgtgccttgtgaacaacccgttcattccttgggtttgtgatgttgctactgagcttgggatcccttgtgccaccctttggattcagtcttgtgctgtgttctcggcttattaccattacagcgccggggcggtggcgtttccgactgaagctgaaccagacttggatgttcagctgcctagtatgcctcttttgaatcatgatgagattccaagctttttgcatccttttactccctttagggttctcggtatggctattttaggccagttcaaaaagttatccaagtcgtcctacgtattgatggacacgatacaagaacttgagcctgagaccattgaagaaatgtcgaaagtctgcatagtgaaaccagtggggcccttattcaagattccggaagctaacaacacgaccattcgcggtgacttaatgaaagccgatgattgtctcgactggctcagctcaaaacctccagcatcagttgtttacatctcttttgggagcattgtgtacttgaagcaagagcaagtggatgagattgctcatggtttattgagctctgggatttcatttttatgggttctgaggccgccgcgcaaagcagccgggtttgacatgcatgttttgccagaagggtttttggataaggttggggataacggaaaattggtgcaatggagtccacaagagagagttttggctcacccttctttggcttgtttcttaactcattgtggttggaactcttcagtagaagcactgactttgggagtacccgtggtgacttttcctcaatggggtgaccaagtcaccaatgccaagtacttggttgatgtgtttggtgtggggcttagattgtgtagaggggaagctgagaataggttggtcctgagagatgagattgagaagtgcttgttggaggcgacggtgggggagaaggcggccgagttgaagcaaaacgctttgagatggaagaaggtggcggaggaggcggtggctgaaggcggttcttcccaacgcaaccttcaagattttctagacgagattgcaaggacttgcattgcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

451

Amino Acids

49.91

Weight (kDa)

5.16

Isoelectric Point (pI)

43.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 366
AccI GTMKAC 1 cut(s) 102
AccII CGCG 2 cut(s) 708, 883
AccIII TCCGGA 1 cut(s) 682
AciI CCGC 9 cut(s) 7, 419, 708, 878, 881, 1229, 1271, 1280, 1293
AclWI GGATC 4 cut(s) 173, 186, 343, 356
AcoI YGGCCR 1 cut(s) 1230
AcuI CTGAAG 4 cut(s) 81, 456, 1020, 1308
AfaI GTAC 3 cut(s) 800, 1062, 1112
AfiI CCNNNNNNNGG 3 cut(s) 366, 1000, 1085
AgsI TTSAA 7 cut(s) 484, 562, 629, 676, 805, 1240, 1316
AjuI GAANNNNNNNTTGG 4 cut(s) 1187, 1219, 1296, 1328
AluBI AGCT 9 cut(s) 26, 343, 440, 463, 504, 689, 750, 846, 1160
AluI AGCT 9 cut(s) 26, 343, 440, 463, 504, 689, 750, 846, 1160
Alw21I GWGCWC 1 cut(s) 848
Alw26I GTCTC 2 cut(s) 614, 740
AlwI GGATC 4 cut(s) 173, 186, 343, 356
Ama87I CYCGRG 1 cut(s) 173
Aor13HI TCCGGA 1 cut(s) 682
AoxI GGCC 4 cut(s) 553, 665, 875, 1230
ApaI GGGCCC 1 cut(s) 669
ApeKI GCWGC 3 cut(s) 4, 463, 890
AspLEI GCGC 2 cut(s) 413, 885
AspS9I GGNCC 3 cut(s) 665, 666, 1174
AsuC2I CCSGG 2 cut(s) 415, 895
AsuHPI GGTGA 8 cut(s) 108, 253, 278, 722, 983, 1081, 1090, 1100
AvaI CYCGRG 1 cut(s) 173
AvaII GGWCC 1 cut(s) 1174
BaeGI GKGCMC 1 cut(s) 669
BamHI GGATCC 2 cut(s) 178, 348
BanII GRGCYC 2 cut(s) 669, 848
Bbv12I GWGCWC 1 cut(s) 848
BbvI GCAGC 2 cut(s) 450, 902
BccI CCATC 2 cut(s) 586, 1251
BcnI CCSGG 2 cut(s) 415, 895
BcoDI GTCTC 2 cut(s) 614, 740
BfaI CTAG 3 cut(s) 23, 468, 1325
BfoI RGCGCY 1 cut(s) 414
BisI GCNGC 6 cut(s) 5, 464, 878, 881, 891, 1230
BlpI GCTNAGC 1 cut(s) 746
BlsI GCNGC 6 cut(s) 6, 465, 879, 882, 892, 1231
BmcAI AGTACT 1 cut(s) 1112
Bme1390I CCNGG 2 cut(s) 415, 895
Bme18I GGWCC 1 cut(s) 1174
BmeT110I CYCGRG 1 cut(s) 173
BmgT120I GGNCC 3 cut(s) 665, 666, 1174
BmiI GGNNCC 4 cut(s) 180, 350, 666, 667
BmrFI CCNGG 2 cut(s) 415, 895
BmrI ACTGGG 2 cut(s) 187, 255
BmsI GCATC 3 cut(s) 105, 520, 773
BmuI ACTGGG 2 cut(s) 187, 255
BpmI CTGGAG 1 cut(s) 744
Bpu1102I GCTNAGC 1 cut(s) 746
BpuEI CTTGAG 2 cut(s) 239, 632
BpuMI CCSGG 2 cut(s) 415, 895
BsaAI YACGTR 1 cut(s) 586
BsaI GGTCTC 1 cut(s) 614
BsaJI CCNNGG 6 cut(s) 30, 174, 182, 317, 414, 1065
BsaWI WCCGGW 1 cut(s) 682
BsaXI ACNNNNNCTCC 2 cut(s) 1050, 1080
Bsc4I CCNNNNNNNGG 3 cut(s) 366, 1000, 1085
Bse1I ACTGG 6 cut(s) 119, 193, 250, 556, 659, 746
Bse3DI GCAATG 3 cut(s) 133, 968, 1347
BseAI TCCGGA 1 cut(s) 682
BseDI CCNNGG 6 cut(s) 30, 174, 182, 317, 414, 1065
BseGI GGATG 5 cut(s) 207, 255, 460, 511, 826
BseLI CCNNNNNNNGG 3 cut(s) 366, 1000, 1085
BseMI GCAATG 3 cut(s) 133, 968, 1347
BseMII CTCAG 6 cut(s) 330, 609, 760, 863, 1152, 1169
BseNI ACTGG 6 cut(s) 119, 193, 250, 556, 659, 746
BseRI GAGGAG 1 cut(s) 1289
BseSI GKGCMC 1 cut(s) 669
BseX3I CGGCCG 1 cut(s) 1230
BseXI GCAGC 2 cut(s) 450, 902
Bsh1236I CGCG 2 cut(s) 708, 883
Bsh1285I CGRYCG 1 cut(s) 1233
BshFI GGCC 4 cut(s) 555, 667, 877, 1232
BsiEI CGRYCG 1 cut(s) 1233
BsiHKAI GWGCWC 1 cut(s) 848
BsiHKCI CYCGRG 1 cut(s) 173
BsiSI CCGG 3 cut(s) 414, 683, 894
BslI CCNNNNNNNGG 3 cut(s) 366, 1000, 1085
BsmAI GTCTC 2 cut(s) 614, 740
BsnI GGCC 4 cut(s) 555, 667, 877, 1232
Bso31I GGTCTC 1 cut(s) 614
BsoBI CYCGRG 1 cut(s) 173
Bsp120I GGGCCC 1 cut(s) 665
Bsp1286I GDGCHC 2 cut(s) 669, 848
Bsp13I TCCGGA 1 cut(s) 682
Bsp143I GATC 2 cut(s) 178, 348
Bsp1720I GCTNAGC 1 cut(s) 746
BspACI CCGC 9 cut(s) 7, 419, 708, 878, 881, 1229, 1271, 1280, 1293
BspANI GGCC 4 cut(s) 555, 667, 877, 1232
BspCNI CTCAG 6 cut(s) 331, 610, 759, 864, 1153, 1170
BspEI TCCGGA 1 cut(s) 682
BspFNI CGCG 2 cut(s) 708, 883
BspHI TCATGA 1 cut(s) 487
BspLI GGNNCC 4 cut(s) 180, 350, 666, 667
BspPI GGATC 4 cut(s) 173, 186, 343, 356
BspTNI GGTCTC 1 cut(s) 614
BsrDI GCAATG 3 cut(s) 133, 968, 1347
BsrI ACTGG 6 cut(s) 119, 193, 250, 556, 659, 746
BssECI CCNNGG 6 cut(s) 30, 174, 182, 317, 414, 1065
BssMI GATC 2 cut(s) 178, 348
BssT1I CCWWGG 2 cut(s) 30, 317
Bst4CI ACNGT 1 cut(s) 1216
Bst6I CTCTTC 1 cut(s) 1039
BstAPI GCANNNNNTGC 1 cut(s) 913
BstBAI YACGTR 1 cut(s) 586
BstDEI CTNAG 7 cut(s) 339, 618, 746, 872, 1139, 1161, 1178
BstDSI CCRYGG 1 cut(s) 1065
BstEII GGTNACC 1 cut(s) 1088
BstF5I GGATG 5 cut(s) 207, 255, 460, 511, 826
BstFNI CGCG 2 cut(s) 708, 883
BstH2I RGCGCY 1 cut(s) 414
BstHHI GCGC 2 cut(s) 413, 885
BstKTI GATC 2 cut(s) 181, 351
BstMAI GTCTC 2 cut(s) 614, 740
BstMBI GATC 2 cut(s) 178, 348
BstMCI CGRYCG 1 cut(s) 1233
BstMWI GCNNNNNNNGC 3 cut(s) 472, 913, 1277
BstNSI RCATGY 2 cut(s) 907, 911
BstPI GGTNACC 1 cut(s) 1088
BstSCI CCNGG 2 cut(s) 413, 893
BstSLI GKGCMC 1 cut(s) 669
BstSNI TACGTA 1 cut(s) 586
BstUI CGCG 2 cut(s) 708, 883
BstV1I GCAGC 2 cut(s) 450, 902
BstX2I RGATCY 2 cut(s) 178, 348
BstXI CCANNNNNNTGG 1 cut(s) 1114
BstYI RGATCY 2 cut(s) 178, 348
BstZI CGGCCG 1 cut(s) 1230
BsuRI GGCC 4 cut(s) 555, 667, 877, 1232
BtgI CCRYGG 1 cut(s) 1065
BtsCI GGATG 5 cut(s) 207, 255, 460, 511, 826
BtsIMutI CAGTG 3 cut(s) 57, 666, 1046
CciI TCATGA 1 cut(s) 487
CfoI GCGC 2 cut(s) 413, 885
Cfr13I GGNCC 3 cut(s) 665, 666, 1174
Csp6I GTAC 3 cut(s) 799, 1061, 1111
CviAII CATG 5 cut(s) 263, 488, 833, 904, 908
CviQI GTAC 3 cut(s) 799, 1061, 1111
DdeI CTNAG 7 cut(s) 339, 618, 746, 872, 1139, 1161, 1178
DpnI GATC 2 cut(s) 180, 350
DpnII GATC 2 cut(s) 178, 348
EaeI YGGCCR 1 cut(s) 1230
EagI CGGCCG 1 cut(s) 1230
Eam1104I CTCTTC 1 cut(s) 1039
EarI CTCTTC 1 cut(s) 1039
EciI GGCGGA 1 cut(s) 1286
Ecl136II GAGCTC 1 cut(s) 846
EclXI CGGCCG 1 cut(s) 1230
Eco105I TACGTA 1 cut(s) 586
Eco130I CCWWGG 2 cut(s) 30, 317
Eco24I GRGCYC 2 cut(s) 669, 848
Eco31I GGTCTC 1 cut(s) 614
Eco47I GGWCC 1 cut(s) 1174
Eco52I CGGCCG 1 cut(s) 1230
Eco53kI GAGCTC 1 cut(s) 846
Eco57I CTGAAG 4 cut(s) 81, 456, 1020, 1308
Eco88I CYCGRG 1 cut(s) 173
Eco91I GGTNACC 1 cut(s) 1088
EcoICRI GAGCTC 1 cut(s) 846
EcoO109I RGGNCCY 2 cut(s) 665, 666
EcoO65I GGTNACC 1 cut(s) 1088
EcoT14I CCWWGG 2 cut(s) 30, 317
EcoT22I ATGCAT 1 cut(s) 909
EcoT38I GRGCYC 2 cut(s) 669, 848
ErhI CCWWGG 2 cut(s) 30, 317
FaeI CATG 5 cut(s) 266, 491, 836, 907, 911
FatI CATG 5 cut(s) 262, 487, 832, 903, 907
FblI GTMKAC 1 cut(s) 102
Fnu4HI GCNGC 6 cut(s) 5, 464, 878, 881, 891, 1230
FokI GGATG 5 cut(s) 194, 262, 467, 498, 833
FriOI GRGCYC 2 cut(s) 669, 848
Fsp4HI GCNGC 6 cut(s) 5, 464, 878, 881, 891, 1230
FspBI CTAG 3 cut(s) 23, 468, 1325
GlaI GCGC 2 cut(s) 412, 884
GluI GCNGC 6 cut(s) 5, 464, 878, 881, 891, 1230
GsuI CTGGAG 1 cut(s) 744
HaeII RGCGCY 1 cut(s) 414
HaeIII GGCC 4 cut(s) 555, 667, 877, 1232
HapII CCGG 3 cut(s) 414, 683, 894
HhaI GCGC 2 cut(s) 413, 885
Hin1II CATG 5 cut(s) 266, 491, 836, 907, 911
Hin6I GCGC 2 cut(s) 411, 883
HinP1I GCGC 2 cut(s) 411, 883
HincII GTYRAC 1 cut(s) 103
HindII GTYRAC 1 cut(s) 103
HindIII AAGCTT 1 cut(s) 502
HinfI GANTC 5 cut(s) 370, 484, 496, 679, 967
HpaII CCGG 3 cut(s) 414, 683, 894
HphI GGTGA 8 cut(s) 108, 253, 278, 722, 983, 1081, 1090, 1100
Hpy166II GTNNAC 5 cut(s) 103, 301, 775, 799, 971
Hpy188I TCNGA 3 cut(s) 183, 432, 873
Hpy188III TCNNGA 9 cut(s) 167, 218, 488, 676, 683, 737, 1177, 1316, 1325
Hpy8I GTNNAC 5 cut(s) 103, 301, 775, 799, 971
Hpy99I CGWCG 3 cut(s) 104, 161, 1216
HpyAV CCTTC 9 cut(s) 123, 226, 266, 914, 1005, 1219, 1258, 1283, 1322
HpyCH4III ACNGT 1 cut(s) 1216
HpyCH4IV ACGT 1 cut(s) 585
HpyCH4V TGCA 6 cut(s) 511, 648, 907, 961, 1337, 1347
HpyF10VI GCNNNNNNNGC 3 cut(s) 472, 913, 1277
HpyF3I CTNAG 7 cut(s) 339, 618, 746, 872, 1139, 1161, 1178
HpySE526I ACGT 1 cut(s) 585
Hsp92II CATG 5 cut(s) 266, 491, 836, 907, 911
HspAI GCGC 2 cut(s) 411, 883
Kpn2I TCCGGA 1 cut(s) 682
Kzo9I GATC 2 cut(s) 178, 348
LmnI GCTCC 1 cut(s) 789
Lsp1109I GCAGC 2 cut(s) 450, 902
LweI GCATC 3 cut(s) 105, 520, 773
MaeI CTAG 3 cut(s) 23, 468, 1325
MaeII ACGT 1 cut(s) 585
MaeIII GTNAC 6 cut(s) 43, 241, 710, 1069, 1088, 1096
MalI GATC 2 cut(s) 180, 350
MboI GATC 2 cut(s) 178, 348
MboII GAAGA 5 cut(s) 74, 641, 1026, 1273, 1290
MflI RGATCY 2 cut(s) 178, 348
MhlI GDGCHC 2 cut(s) 669, 848
MluCI AATT 1 cut(s) 953
MlyI GAGTC 1 cut(s) 976
MmeI TCCRAC 4 cut(s) 177, 455, 1007, 1185
Mph1103I ATGCAT 1 cut(s) 909
MroI TCCGGA 1 cut(s) 682
MseI TTAA 3 cut(s) 716, 1013, 1354
MslI CAYNNNNRTG 1 cut(s) 862
MspA1I CMGCKG 1 cut(s) 463
MspI CCGG 3 cut(s) 414, 683, 894
MspR9I CCNGG 2 cut(s) 415, 895
MvnI CGCG 2 cut(s) 708, 883
MwoI GCNNNNNNNGC 3 cut(s) 472, 913, 1277
NciI CCSGG 2 cut(s) 415, 895
NdeII GATC 2 cut(s) 178, 348
NlaIII CATG 5 cut(s) 266, 491, 836, 907, 911
NlaIV GGNNCC 4 cut(s) 180, 350, 666, 667
NmeAIII GCCGAG 2 cut(s) 371, 1258
NmuCI GTSAC 6 cut(s) 43, 241, 710, 1069, 1088, 1096
NsiI ATGCAT 1 cut(s) 909
NspI RCATGY 2 cut(s) 907, 911
PagI TCATGA 1 cut(s) 487
PfeI GAWTC 4 cut(s) 370, 484, 496, 679
PflFI GACNNNGTC 1 cut(s) 1094
PflMI CCANNNNNTGG 1 cut(s) 366
PkrI GCNGC 6 cut(s) 6, 465, 879, 882, 892, 1231
PleI GAGTC 1 cut(s) 975
PpsI GAGTC 1 cut(s) 975
Ppu21I YACGTR 1 cut(s) 586
Psp124BI GAGCTC 1 cut(s) 848
PspEI GGTNACC 1 cut(s) 1088
PspN4I GGNNCC 4 cut(s) 180, 350, 666, 667
PspOMI GGGCCC 1 cut(s) 665
PspPI GGNCC 3 cut(s) 665, 666, 1174
PsuI RGATCY 2 cut(s) 178, 348
PsyI GACNNNGTC 1 cut(s) 1094
PvuII CAGCTG 1 cut(s) 463
RsaI GTAC 3 cut(s) 800, 1062, 1112
RsaNI GTAC 3 cut(s) 799, 1061, 1111
RseI CAYNNNNRTG 1 cut(s) 862
SacI GAGCTC 1 cut(s) 848
SalI GTCGAC 1 cut(s) 101
SaqAI TTAA 3 cut(s) 716, 1013, 1354
SatI GCNGC 6 cut(s) 5, 464, 878, 881, 891, 1230
Sau3AI GATC 2 cut(s) 178, 348
Sau96I GGNCC 3 cut(s) 665, 666, 1174
ScaI AGTACT 1 cut(s) 1112
SchI GAGTC 1 cut(s) 976
ScrFI CCNGG 2 cut(s) 415, 895
SduI GDGCHC 2 cut(s) 669, 848
SfaNI GCATC 3 cut(s) 105, 520, 773
SinI GGWCC 1 cut(s) 1174
SmiMI CAYNNNNRTG 1 cut(s) 862
SmlI CTYRAG 2 cut(s) 218, 611
SmoI CTYRAG 2 cut(s) 218, 611
SnaBI TACGTA 1 cut(s) 586
Sse9I AATT 1 cut(s) 953
SsiI CCGC 9 cut(s) 7, 419, 708, 878, 881, 1229, 1271, 1280, 1293
SspMI CTAG 3 cut(s) 23, 468, 1325
SstI GAGCTC 1 cut(s) 848
StyD4I CCNGG 2 cut(s) 413, 893
StyI CCWWGG 2 cut(s) 30, 317
TaaI ACNGT 1 cut(s) 1216
TaiI ACGT 1 cut(s) 588
TaqI TCGA 4 cut(s) 102, 144, 638, 738
TasI AATT 1 cut(s) 953
TatI WGTACW 2 cut(s) 798, 1110
TauI GCSGC 3 cut(s) 880, 883, 1232
TfiI GAWTC 4 cut(s) 370, 484, 496, 679
Tru1I TTAA 3 cut(s) 716, 1013, 1354
Tru9I TTAA 3 cut(s) 716, 1013, 1354
TscAI CASTG 3 cut(s) 64, 666, 1053
TseFI GTSAC 6 cut(s) 43, 241, 710, 1069, 1088, 1096
TseI GCWGC 3 cut(s) 4, 463, 890
Tsp45I GTSAC 6 cut(s) 43, 241, 710, 1069, 1088, 1096
TspDTI ATGAA 3 cut(s) 301, 734, 846
TspGWI ACGGA 1 cut(s) 963
TspRI CASTG 3 cut(s) 64, 666, 1053
Tth111I GACNNNGTC 1 cut(s) 1094
Van91I CCANNNNNTGG 1 cut(s) 366
VpaK11BI GGWCC 1 cut(s) 1174
XbaI TCTAGA 1 cut(s) 1324
XceI RCATGY 2 cut(s) 907, 911
XcmI CCANNNNNNNNNTGG 1 cut(s) 37
XmiI GTMKAC 1 cut(s) 102
XspI CTAG 3 cut(s) 23, 468, 1325
ZrmI AGTACT 1 cut(s) 1112
Zsp2I ATGCAT 1 cut(s) 909
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.