Rorug05G0555700

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
74395821 .. 74398691
2871 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0555700.1

Sequence Viewer

Length: 369 bp
ATGCTCATTGAAGCTATGAGTTCTCTCAATACTGTGATAGAGGATGGTAGCATTGAGGAGGTAGCTGAAAAAATAATGATTATGCATGAAGAATGTTTGGATTGCAATTTCAAGTCTATGGAAAGCCTAAGGGAAGCCAATAGTCGAAGAGTTCCAACTCCTCATGTTAAACAGGTTGTGGATGACGATGAAGACAGTGATGATAATGATGATGATACTGATCCTAGCATGAATAAAGATGAGTCATCAAACATGAATGTGGACAGACCAGAGTCTCATGCAGTAGAGCCAAAGACCAGGCAGGGAGTTGAAGCAGAAGATGGTTGGGAGGTAGTCGGACCGAGAAGAAGTAGGGGTAAAAGGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

122

Amino Acids

13.8

Weight (kDa)

4.41

Isoelectric Point (pI)

77.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 215
AgsI TTSAA 3 cut(s) 11, 112, 311
AjnI CCWGG 1 cut(s) 296
AluBI AGCT 2 cut(s) 14, 65
AluI AGCT 2 cut(s) 14, 65
Alw26I GTCTC 1 cut(s) 279
AlwI GGATC 1 cut(s) 215
AspS9I GGNCC 1 cut(s) 338
AvaII GGWCC 1 cut(s) 338
AxyI CCTNAGG 1 cut(s) 128
BbsI GAAGAC 1 cut(s) 198
BccI CCATC 2 cut(s) 38, 314
BciT130I CCWGG 1 cut(s) 298
BcoDI GTCTC 1 cut(s) 279
BfaI CTAG 1 cut(s) 225
Bme1390I CCNGG 1 cut(s) 298
Bme18I GGWCC 1 cut(s) 338
BmgT120I GGNCC 1 cut(s) 338
BmrFI CCNGG 1 cut(s) 298
BoxI GACNNNNGTC 1 cut(s) 271
BpiI GAAGAC 1 cut(s) 198
BsaBI GATNNNNATC 1 cut(s) 219
Bse21I CCTNAGG 1 cut(s) 128
Bse8I GATNNNNATC 1 cut(s) 219
BseBI CCWGG 1 cut(s) 298
BseGI GGATG 2 cut(s) 49, 187
BseJI GATNNNNATC 1 cut(s) 219
BseRI GAGGAG 2 cut(s) 71, 150
BsmAI GTCTC 1 cut(s) 279
Bsp143I GATC 1 cut(s) 220
BspPI GGATC 1 cut(s) 215
BssMI GATC 1 cut(s) 220
Bst2UI CCWGG 1 cut(s) 298
Bst4CI ACNGT 2 cut(s) 34, 197
Bst6I CTCTTC 1 cut(s) 142
BstDEI CTNAG 1 cut(s) 128
BstF5I GGATG 2 cut(s) 49, 187
BstKTI GATC 1 cut(s) 223
BstMAI GTCTC 1 cut(s) 279
BstMBI GATC 1 cut(s) 220
BstNI CCWGG 1 cut(s) 298
BstPAI GACNNNNGTC 1 cut(s) 271
BstSCI CCNGG 1 cut(s) 296
BstV2I GAAGAC 1 cut(s) 198
Bsu36I CCTNAGG 1 cut(s) 128
BtsCI GGATG 2 cut(s) 49, 187
BtsIMutI CAGTG 1 cut(s) 202
Cfr13I GGNCC 1 cut(s) 338
CpoI CGGWCCG 1 cut(s) 338
CspI CGGWCCG 1 cut(s) 338
CviAII CATG 5 cut(s) 86, 164, 229, 253, 278
CviJI RGCY 5 cut(s) 14, 65, 126, 137, 289
CviKI_1 RGCY 5 cut(s) 14, 65, 126, 137, 289
DdeI CTNAG 1 cut(s) 128
DpnI GATC 1 cut(s) 222
DpnII GATC 1 cut(s) 220
Eam1104I CTCTTC 1 cut(s) 142
EarI CTCTTC 1 cut(s) 142
Eco47I GGWCC 1 cut(s) 338
Eco81I CCTNAGG 1 cut(s) 128
EcoRII CCWGG 1 cut(s) 296
EcoT22I ATGCAT 1 cut(s) 87
FaeI CATG 5 cut(s) 89, 167, 232, 256, 281
FaiI YATR 8 cut(s) 17, 83, 87, 119, 165, 230, 254, 279
FatI CATG 5 cut(s) 85, 163, 228, 252, 277
FokI GGATG 2 cut(s) 56, 194
FspBI CTAG 1 cut(s) 225
Hin1II CATG 5 cut(s) 89, 167, 232, 256, 281
HinfI GANTC 2 cut(s) 242, 272
Hpy166II GTNNAC 1 cut(s) 262
Hpy188I TCNGA 1 cut(s) 338
Hpy8I GTNNAC 1 cut(s) 262
HpyCH4III ACNGT 2 cut(s) 34, 197
HpyCH4V TGCA 3 cut(s) 85, 105, 281
HpyF3I CTNAG 1 cut(s) 128
Hsp92II CATG 5 cut(s) 89, 167, 232, 256, 281
Kzo9I GATC 1 cut(s) 220
LpnPI CCDG 5 cut(s) 158, 282, 283, 287, 310
MaeI CTAG 1 cut(s) 225
MalI GATC 1 cut(s) 222
MboI GATC 1 cut(s) 220
MboII GAAGA 5 cut(s) 101, 159, 203, 329, 357
MluCI AATT 2 cut(s) 106, 364
MlyI GAGTC 2 cut(s) 251, 281
MmeI TCCRAC 2 cut(s) 179, 316
MnlI CCTC 5 cut(s) 34, 49, 52, 171, 322
Mph1103I ATGCAT 1 cut(s) 87
MseI TTAA 1 cut(s) 168
MslI CAYNNNNRTG 1 cut(s) 257
MspR9I CCNGG 1 cut(s) 298
MvaI CCWGG 1 cut(s) 298
NdeII GATC 1 cut(s) 220
NlaIII CATG 5 cut(s) 89, 167, 232, 256, 281
NsiI ATGCAT 1 cut(s) 87
PleI GAGTC 2 cut(s) 250, 280
PpsI GAGTC 2 cut(s) 250, 280
PshAI GACNNNNGTC 1 cut(s) 271
Psp6I CCWGG 1 cut(s) 296
PspGI CCWGG 1 cut(s) 296
PspPI GGNCC 1 cut(s) 338
RseI CAYNNNNRTG 1 cut(s) 257
Rsr2I CGGWCCG 1 cut(s) 338
RsrII CGGWCCG 1 cut(s) 338
SaqAI TTAA 1 cut(s) 168
Sau3AI GATC 1 cut(s) 220
Sau96I GGNCC 1 cut(s) 338
SchI GAGTC 2 cut(s) 251, 281
ScrFI CCNGG 1 cut(s) 298
SetI ASST 5 cut(s) 16, 63, 67, 177, 333
SinI GGWCC 1 cut(s) 338
SmiMI CAYNNNNRTG 1 cut(s) 257
Sse9I AATT 2 cut(s) 106, 364
SspMI CTAG 1 cut(s) 225
StyD4I CCNGG 1 cut(s) 296
TaaI ACNGT 2 cut(s) 34, 197
TaqI TCGA 1 cut(s) 145
TaqII GACCGA 1 cut(s) 355
TasI AATT 2 cut(s) 106, 364
Tru1I TTAA 1 cut(s) 168
Tru9I TTAA 1 cut(s) 168
TscAI CASTG 1 cut(s) 202
TspDTI ATGAA 4 cut(s) 102, 204, 245, 269
TspRI CASTG 1 cut(s) 202
VpaK11BI GGWCC 1 cut(s) 338
XspI CTAG 1 cut(s) 225
Zsp2I ATGCAT 1 cut(s) 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.