MD10G1216600.v1.1

Dehydrogenase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
31502737 .. 31510024
7288 bp
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UTR
Exon/CDS
Intron
MD10G1216600.v1.1.491

Sequence Viewer

Length: 1626 bp
ATGACCTTCAGAGCGTCATCCATGGCAGGTCGATCCTTTAAGTTCCTCTCACATTTGCCTTACATGCACGCCCCAACTCCCCTCTCTCGCCAGCTGCAACACCCTCACACTCTGAACTGTGAGCAAGCAGCACTGTTAATTAGCATGGACGCAAAAAGCTTCGTTTCTCAGCTTAATGGTGCTGGTCTATTACGTAGCCAGGGCCTTATTGGGGGGAGATGGTCTGATGCATACGATGGGAACACTATAAAGGTTCACAACCCAGCAACCGGCGAAGTTATAACAACTGTTCCATGCATGGGTCAAAAGGAGACAAATGATGCAATATCTTCAGCCTATGGTGCATTTAGTTCTTGGAGCAACCTCACTGCTTCTGAAAGGAGCAAATATCTAAGGAAATGGTATGATCTGATAATATCCCACAAAGAAGAGCTTGGACAACTCATTACCTTGGAGCAAGGGAAACCTCTAAAAGAAGCGATTGGTGAGGTGAACTACGGGGCTGCGTTTATTGAGTTCTATGCTGAGGAGGCAAAACGTGTATATGGTGATATAATTCCTGCTACTCTTGCTGATCGACGGTTGTTTGTTCTGAAGCAGCCTGTAGGTGTTGTTGGTGCAGTTAGTCCCTGGAACTTCCCATTGGCTATGATTACCCGCAAGGTTGGTCCTGCTCTTGCATGTGGCTGCACAGTAGTCATAAAACCATCTGAATATACTCCCCTCACAGCTTTAGCAGCAGCTGAGCTCGCCCTTCAGGCTGGAATACCACCGGGTGTGGTGAATGTGGTTATGGGGAATGCTTCTGAAATTGGGGATGCTTTACTTGCAAGTCCACAGGTAAGAAAGATCACTTTCACAGGCTCAACAGCAGTTGGAAAGAAGTTGATGGCCGGTGCAGCTGGGACTGTTAAAAGGGTATCTCTTGAACTTGGTGGCAATGCACCTTGCATAGTCTTTGATGATGCCGACCTGGATGTAGCAGTAAAAGGAACTCTTGCAGCAAAGTTCCGTAATAGTGGACAGACATGTGTTTGTGCAAACAGGATTATCGTACAGGAAGGTATCTATGAGAAATTTATGGATGCTTTTGTGAAAGCTGTCCAGAATCTGCAAGTTGGGGATGGCTTCAGTGAAGGTGTGGTCCAGGGCCCTTTAATAAATGAAGCAGCAGTACAAAAGGTCGAATCATTTGTTCAAGATGCTTTATCAAAGGGAGCACAAGTTGTTCTTGGAGCCAAGAGGCATAGCCTTGGAATGACTTTTTATGAGCCTACAGTTCTCAGAGATGTCAAGAGTGATATGCTAATATCAAGAGAGGAAGTATTTGGGCCTGTGGCACCCCTTTTGCGTTTCAAAACTGAGGAGGAGGCTATCCGCATCGCTAATGACACCAACGCAGGGTTAGCTGCTTACATATTTACAAATAGCATTCAACGTTCGTGGCGTGTCTCTGAAGCACTTGAATATGGACTTGTTGGTGTCAATGAAGGCCTAGTTTCGACAGAGGTGGCTCCCTTTGGAGGTGTCAAACAATCTGGTCTTGGACGAGAAGGTTCCAAGTATGGGATGGATGAATATTTGGAAGTTAAATACGTGTGCATGGGGAATATGAGCAGTAACTGA

Protein Analysis

542

Amino Acids

58.09

Weight (kDa)

6.69

Isoelectric Point (pI)

40.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 76 - 533 1.7e-175 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 281
Acc36I ACCTGC 1 cut(s) 17
AccB1I GGYRCC 1 cut(s) 1339
AciI CCGC 2 cut(s) 658, 1378
AclI AACGTT 1 cut(s) 1438
AclWI GGATC 1 cut(s) 27
AcoI YGGCCR 1 cut(s) 891
AcsI RAATTY 1 cut(s) 1076
AcuI CTGAAG 5 cut(s) 315, 614, 740, 1114, 1476
AdeI CACNNNGTG 1 cut(s) 776
AfaI GTAC 2 cut(s) 1056, 1176
AfiI CCNNNNNNNGG 6 cut(s) 211, 269, 299, 1401, 1523, 1566
AflIII ACRYGT 3 cut(s) 538, 1028, 1596
AgsI TTSAA 5 cut(s) 929, 1199, 1357, 1436, 1466
AjnI CCWGG 4 cut(s) 198, 629, 972, 1146
AjuI GAANNNNNNNTTGG 2 cut(s) 626, 658
Alw21I GWGCWC 2 cut(s) 750, 1222
Alw26I GTCTC 2 cut(s) 305, 1456
AlwI GGATC 1 cut(s) 27
AlwNI CAGNNNCTG 3 cut(s) 743, 1111, 1623
AoxI GGCC 5 cut(s) 202, 891, 1150, 1331, 1492
ApaI GGGCCC 1 cut(s) 1154
ApoI RAATTY 1 cut(s) 1076
AspS9I GGNCC 6 cut(s) 202, 668, 1144, 1150, 1151, 1331
AsuC2I CCSGG 1 cut(s) 774
AsuHPI GGTGA 4 cut(s) 497, 502, 560, 793
AvaII GGWCC 2 cut(s) 668, 1144
BaeGI GKGCMC 1 cut(s) 1154
BanI GGYRCC 1 cut(s) 1339
BanII GRGCYC 2 cut(s) 750, 1154
BarI GAAGNNNNNNTAC 2 cut(s) 1158, 1190
Bbv12I GWGCWC 2 cut(s) 750, 1222
BbvCI CCTCAGC 1 cut(s) 525
BccI CCATC 6 cut(s) 213, 230, 715, 883, 1118, 1564
BciT130I CCWGG 4 cut(s) 200, 631, 974, 1148
BcnI CCSGG 1 cut(s) 774
BcoDI GTCTC 2 cut(s) 305, 1456
BfaI CTAG 1 cut(s) 1496
BfmI CTRYAG 2 cut(s) 603, 1275
BfuAI ACCTGC 1 cut(s) 17
BglI GCCNNNNNGGC 1 cut(s) 758
BlpI GCTNAGC 1 cut(s) 744
Bme1390I CCNGG 5 cut(s) 200, 631, 774, 974, 1148
Bme18I GGWCC 2 cut(s) 668, 1144
BmgT120I GGNCC 6 cut(s) 202, 668, 1144, 1150, 1151, 1331
BmiI GGNNCC 5 cut(s) 1152, 1237, 1341, 1515, 1558
BmrFI CCNGG 5 cut(s) 200, 631, 774, 974, 1148
BmsI GCATC 7 cut(s) 217, 310, 808, 955, 1075, 1192, 1389
Bpu10I CCTNAGC 1 cut(s) 525
Bpu1102I GCTNAGC 1 cut(s) 744
BpuMI CCSGG 1 cut(s) 774
BsaAI YACGTR 2 cut(s) 194, 1597
BsaJI CCNNGG 6 cut(s) 21, 199, 450, 629, 1147, 1252
BsaXI ACNNNNNCTCC 2 cut(s) 1209, 1239
Bsc4I CCNNNNNNNGG 6 cut(s) 211, 269, 299, 1401, 1523, 1566
Bse118I RCCGGY 2 cut(s) 269, 893
Bse3DI GCAATG 1 cut(s) 946
BseBI CCWGG 4 cut(s) 200, 631, 974, 1148
BseDI CCNNGG 6 cut(s) 21, 199, 450, 629, 1147, 1252
BseGI GGATG 7 cut(s) 17, 823, 982, 1090, 1129, 1575, 1579
BseLI CCNNNNNNNGG 6 cut(s) 211, 269, 299, 1401, 1523, 1566
BseMI GCAATG 1 cut(s) 946
BseMII CTCAG 5 cut(s) 182, 516, 735, 1297, 1353
BseRI GAGGAG 3 cut(s) 542, 1379, 1382
BseSI GKGCMC 1 cut(s) 1154
BseYI CCCAGC 2 cut(s) 262, 902
BsgI GTGCAG 3 cut(s) 639, 673, 918
BshFI GGCC 5 cut(s) 204, 893, 1152, 1333, 1494
BshNI GGYRCC 1 cut(s) 1339
BsiHKAI GWGCWC 2 cut(s) 750, 1222
BsiSI CCGG 3 cut(s) 270, 773, 894
BslFI GGGAC 2 cut(s) 612, 919
BslI CCNNNNNNNGG 6 cut(s) 211, 269, 299, 1401, 1523, 1566
BsmAI GTCTC 2 cut(s) 305, 1456
BsmFI GGGAC 2 cut(s) 612, 919
BsmI GAATGC 2 cut(s) 805, 1431
BsnI GGCC 5 cut(s) 204, 893, 1152, 1333, 1494
Bsp120I GGGCCC 1 cut(s) 1150
Bsp1286I GDGCHC 3 cut(s) 750, 1154, 1222
Bsp143I GATC 4 cut(s) 32, 406, 574, 849
Bsp1720I GCTNAGC 1 cut(s) 744
Bsp19I CCATGG 1 cut(s) 21
BspACI CCGC 2 cut(s) 658, 1378
BspANI GGCC 5 cut(s) 204, 893, 1152, 1333, 1494
BspCNI CTCAG 5 cut(s) 181, 517, 736, 1296, 1354
BspLI GGNNCC 5 cut(s) 1152, 1237, 1341, 1515, 1558
BspMI ACCTGC 1 cut(s) 17
BspPI GGATC 1 cut(s) 27
BspQI GCTCTTC 1 cut(s) 423
BspT107I GGYRCC 1 cut(s) 1339
BsrDI GCAATG 1 cut(s) 946
BsrFI RCCGGY 2 cut(s) 269, 893
BssAI RCCGGY 2 cut(s) 269, 893
BssECI CCNNGG 6 cut(s) 21, 199, 450, 629, 1147, 1252
BssMI GATC 4 cut(s) 32, 406, 574, 849
BssT1I CCWWGG 3 cut(s) 21, 450, 1252
Bst2UI CCWGG 4 cut(s) 200, 631, 974, 1148
Bst4CI ACNGT 7 cut(s) 119, 135, 289, 582, 694, 910, 1279
Bst6I CTCTTC 1 cut(s) 423
BstBAI YACGTR 2 cut(s) 194, 1597
BstC8I GCNNGC 4 cut(s) 69, 92, 126, 750
BstDEI CTNAG 6 cut(s) 168, 392, 525, 744, 1283, 1362
BstDSI CCRYGG 1 cut(s) 21
BstF5I GGATG 7 cut(s) 17, 823, 982, 1090, 1129, 1575, 1579
BstKTI GATC 4 cut(s) 35, 409, 577, 852
BstMAI GTCTC 2 cut(s) 305, 1456
BstMBI GATC 4 cut(s) 32, 406, 574, 849
BstNI CCWGG 4 cut(s) 200, 631, 974, 1148
BstNSI RCATGY 3 cut(s) 67, 684, 1032
BstSCI CCNGG 5 cut(s) 198, 629, 772, 972, 1146
BstSFI CTRYAG 2 cut(s) 603, 1275
BstSLI GKGCMC 1 cut(s) 1154
BstSNI TACGTA 1 cut(s) 194
BsuRI GGCC 5 cut(s) 204, 893, 1152, 1333, 1494
BtgI CCRYGG 1 cut(s) 21
BtgZI GCGATG 1 cut(s) 1366
BtsCI GGATG 7 cut(s) 17, 823, 982, 1090, 1129, 1575, 1579
BtsI GCAGTG 1 cut(s) 366
BtsIMutI CAGTG 3 cut(s) 131, 366, 1138
BveI ACCTGC 1 cut(s) 17
Cac8I GCNNGC 4 cut(s) 69, 92, 126, 750
CaiI CAGNNNCTG 3 cut(s) 743, 1111, 1623
Cfr10I RCCGGY 2 cut(s) 269, 893
Cfr13I GGNCC 6 cut(s) 202, 668, 1144, 1150, 1151, 1331
CseI GACGC 2 cut(s) 3, 158
Csp6I GTAC 2 cut(s) 1055, 1175
CspCI CAANNNNNGTGG 2 cut(s) 1424, 1459
CviAII CATG 8 cut(s) 22, 64, 145, 294, 298, 681, 1029, 1603
CviQI GTAC 2 cut(s) 1055, 1175
DdeI CTNAG 6 cut(s) 168, 392, 525, 744, 1283, 1362
DpnI GATC 4 cut(s) 34, 408, 576, 851
DpnII GATC 4 cut(s) 32, 406, 574, 849
DraIII CACNNNGTG 1 cut(s) 776
EaeI YGGCCR 1 cut(s) 891
Eam1104I CTCTTC 1 cut(s) 423
EarI CTCTTC 1 cut(s) 423
Ecl136II GAGCTC 1 cut(s) 748
Eco105I TACGTA 1 cut(s) 194
Eco130I CCWWGG 3 cut(s) 21, 450, 1252
Eco147I AGGCCT 1 cut(s) 1494
Eco24I GRGCYC 2 cut(s) 750, 1154
Eco47I GGWCC 2 cut(s) 668, 1144
Eco53kI GAGCTC 1 cut(s) 748
Eco57I CTGAAG 5 cut(s) 315, 614, 740, 1114, 1476
EcoICRI GAGCTC 1 cut(s) 748
EcoO109I RGGNCCY 3 cut(s) 202, 1150, 1151
EcoRII CCWGG 4 cut(s) 198, 629, 972, 1146
EcoT14I CCWWGG 3 cut(s) 21, 450, 1252
EcoT22I ATGCAT 2 cut(s) 232, 299
EcoT38I GRGCYC 2 cut(s) 750, 1154
ErhI CCWWGG 3 cut(s) 21, 450, 1252
FaeI CATG 8 cut(s) 25, 67, 148, 297, 301, 684, 1032, 1606
FalI AAGNNNNNCTT 6 cut(s) 417, 449, 981, 1013, 1215, 1247
FaqI GGGAC 2 cut(s) 612, 919
FatI CATG 8 cut(s) 21, 63, 144, 293, 297, 680, 1028, 1602
FauI CCCGC 1 cut(s) 665
FokI GGATG 7 cut(s) 4, 830, 989, 1097, 1136, 1582, 1586
FriOI GRGCYC 2 cut(s) 750, 1154
FspBI CTAG 1 cut(s) 1496
GsaI CCCAGC 2 cut(s) 266, 906
HaeIII GGCC 5 cut(s) 204, 893, 1152, 1333, 1494
HapII CCGG 3 cut(s) 270, 773, 894
HgaI GACGC 2 cut(s) 3, 158
Hin1II CATG 8 cut(s) 25, 67, 148, 297, 301, 684, 1032, 1606
HindIII AAGCTT 1 cut(s) 157
HinfI GANTC 2 cut(s) 1108, 1187
HpaII CCGG 3 cut(s) 270, 773, 894
HphI GGTGA 4 cut(s) 497, 502, 560, 793
Hpy166II GTNNAC 4 cut(s) 256, 493, 836, 1022
Hpy188III TCNNGA 5 cut(s) 926, 1105, 1199, 1294, 1314
Hpy8I GTNNAC 4 cut(s) 256, 493, 836, 1022
Hpy99I CGWCG 1 cut(s) 582
HpyAV CCTTC 6 cut(s) 16, 764, 1055, 1130, 1484, 1547
HpyCH4III ACNGT 7 cut(s) 119, 135, 289, 582, 694, 910, 1279
HpyCH4IV ACGT 4 cut(s) 193, 538, 1438, 1596
HpyF3I CTNAG 6 cut(s) 168, 392, 525, 744, 1283, 1362
HpySE526I ACGT 4 cut(s) 193, 538, 1438, 1596
Hsp92II CATG 8 cut(s) 25, 67, 148, 297, 301, 684, 1032, 1606
Kzo9I GATC 4 cut(s) 32, 406, 574, 849
LguI GCTCTTC 1 cut(s) 423
LmnI GCTCC 6 cut(s) 357, 381, 454, 1217, 1235, 1519
LweI GCATC 7 cut(s) 217, 310, 808, 955, 1075, 1192, 1389
MaeI CTAG 1 cut(s) 1496
MaeII ACGT 4 cut(s) 193, 538, 1438, 1596
MaeIII GTNAC 1 cut(s) 1619
MalI GATC 4 cut(s) 34, 408, 576, 851
MboI GATC 4 cut(s) 32, 406, 574, 849
MboII GAAGA 2 cut(s) 321, 440
MhlI GDGCHC 3 cut(s) 750, 1154, 1222
MluCI AATT 4 cut(s) 138, 555, 810, 1076
MmeI TCCRAC 1 cut(s) 856
Mph1103I ATGCAT 2 cut(s) 232, 299
MseI TTAA 6 cut(s) 39, 137, 174, 912, 1157, 1590
MspA1I CMGCKG 3 cut(s) 94, 743, 902
MspI CCGG 3 cut(s) 270, 773, 894
MspR9I CCNGG 5 cut(s) 200, 631, 774, 974, 1148
Mva1269I GAATGC 2 cut(s) 805, 1431
MvaI CCWGG 4 cut(s) 200, 631, 974, 1148
NciI CCSGG 1 cut(s) 774
NcoI CCATGG 1 cut(s) 21
NdeII GATC 4 cut(s) 32, 406, 574, 849
NlaIII CATG 8 cut(s) 25, 67, 148, 297, 301, 684, 1032, 1606
NlaIV GGNNCC 5 cut(s) 1152, 1237, 1341, 1515, 1558
NsiI ATGCAT 2 cut(s) 232, 299
NspI RCATGY 3 cut(s) 67, 684, 1032
PceI AGGCCT 1 cut(s) 1494
PciI ACATGT 1 cut(s) 1028
PciSI GCTCTTC 1 cut(s) 423
PcsI WCGNNNNNNNCGW 1 cut(s) 1444
PctI GAATGC 2 cut(s) 805, 1431
PfeI GAWTC 2 cut(s) 1108, 1187
Ppu21I YACGTR 2 cut(s) 194, 1597
PscI ACATGT 1 cut(s) 1028
PsiI TTATAA 1 cut(s) 281
Psp124BI GAGCTC 1 cut(s) 750
Psp1406I AACGTT 1 cut(s) 1438
Psp6I CCWGG 4 cut(s) 198, 629, 972, 1146
PspFI CCCAGC 2 cut(s) 262, 902
PspGI CCWGG 4 cut(s) 198, 629, 972, 1146
PspN4I GGNNCC 5 cut(s) 1152, 1237, 1341, 1515, 1558
PspOMI GGGCCC 1 cut(s) 1150
PspPI GGNCC 6 cut(s) 202, 668, 1144, 1150, 1151, 1331
PstNI CAGNNNCTG 3 cut(s) 743, 1111, 1623
PvuII CAGCTG 3 cut(s) 94, 743, 902
RsaI GTAC 2 cut(s) 1056, 1176
RsaNI GTAC 2 cut(s) 1055, 1175
SacI GAGCTC 1 cut(s) 750
SapI GCTCTTC 1 cut(s) 423
SaqAI TTAA 6 cut(s) 39, 137, 174, 912, 1157, 1590
Sau3AI GATC 4 cut(s) 32, 406, 574, 849
Sau96I GGNCC 6 cut(s) 202, 668, 1144, 1150, 1151, 1331
ScrFI CCNGG 5 cut(s) 200, 631, 774, 974, 1148
SduI GDGCHC 3 cut(s) 750, 1154, 1222
SfaNI GCATC 7 cut(s) 217, 310, 808, 955, 1075, 1192, 1389
SfcI CTRYAG 2 cut(s) 603, 1275
SinI GGWCC 2 cut(s) 668, 1144
SnaBI TACGTA 1 cut(s) 194
Sse9I AATT 4 cut(s) 138, 555, 810, 1076
SseBI AGGCCT 1 cut(s) 1494
SsiI CCGC 2 cut(s) 658, 1378
SspI AATATT 1 cut(s) 1580
SspMI CTAG 1 cut(s) 1496
SstI GAGCTC 1 cut(s) 750
StuI AGGCCT 1 cut(s) 1494
StyD4I CCNGG 5 cut(s) 198, 629, 772, 972, 1146
StyI CCWWGG 3 cut(s) 21, 450, 1252
TaaI ACNGT 7 cut(s) 119, 135, 289, 582, 694, 910, 1279
TaiI ACGT 4 cut(s) 196, 541, 1441, 1599
TaqI TCGA 4 cut(s) 31, 577, 1185, 1502
TasI AATT 4 cut(s) 138, 555, 810, 1076
TatI WGTACW 1 cut(s) 1174
TfiI GAWTC 2 cut(s) 1108, 1187
Tru1I TTAA 6 cut(s) 39, 137, 174, 912, 1157, 1590
Tru9I TTAA 6 cut(s) 39, 137, 174, 912, 1157, 1590
TscAI CASTG 3 cut(s) 138, 373, 1138
TspDTI ATGAA 3 cut(s) 1179, 1503, 1590
TspGWI ACGGA 1 cut(s) 1001
TspRI CASTG 3 cut(s) 138, 373, 1138
VpaK11BI GGWCC 2 cut(s) 668, 1144
XapI RAATTY 1 cut(s) 1076
XceI RCATGY 3 cut(s) 67, 684, 1032
XcmI CCANNNNNNNNNTGG 2 cut(s) 206, 1567
XspI CTAG 1 cut(s) 1496
Zsp2I ATGCAT 2 cut(s) 232, 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.