Prupe.4G128100_v2.0.a1

Dehydrogenase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
7039685 .. 7047528
7844 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G128100.1

Sequence Viewer

Length: 1581 bp
ATGACCTTCAGAGCGTCACGCATGTCAGCTCGATCCTTCAAGCTTTTCACACATTTGCCTTCCATGCAAGCCCCTCCTCTCCTCTCTCGCCAGATTAGCATGGATGTAAAAAGTTTTGCTTCTCGGCTTAGTAGTTCTGGCCTATTACGTAGCCAGGGCCTTATCGGAGGGAAATGGTCTGATGCATATGATGGGAAAACCATACAGGTTCACAATCCAGCAACTGGCGAAGTAATAACAACTGTCCCATGCATGGGTCAAAAGGAGACAAATGATGCAATATCTTCAGCCTATGGTGCATTTAATTCTTGGAGCAAGCTTACTGCTGCTGAAAGGAGCAAATGTCTAAGGAAATGGTATGATCTACTAATTTCCCACAAAGAAGAGCTTGGACAACTCATTACCTTGGAGCAAGGGAAACCTCTAAAAGAAGCCATTGGCGAGGTGAGTTACGGGGCCGGGTTTATTGAGTTGTATGCTGAGGAGGCAAAACGTGTATATGGTGATATCATACCACCAACTCTTTCTGATCGACGGTTGTTTGTTTTGAAGCAGCCTGTTGGTGTTGTTGGTGCAGTTACTCCCTGGAACTTCCCGTTGGCTATGCTTACCCGCAAGGTTGGTCCTGCTCTTGCATGTGGCTGTACAGTGGTCATAAAACCCTCTGAACTTACACCCCTCACAGCTTTAGCAGCAGCTGAGCTGTCCCTTCAAGCTGGAATACCACCGGGTGTGGTGAACGTGGTTATGGGAAATGCTTCAGCAATTGGGGATGCTTTACTTGCAAGTTCGCAGGTAAGAAAGATCACTTTCACAGGCTCAACAGCAGTTGGAAAGAAGCTGATGGCTGGTGCAGCTGCGACTGTCAAAAAGGTATCTCTTGAGCTTGGTGGCAATGCACCCTGCATAGTCTTTGACGATGCAGACCTGGATGTGGCGGTAAAAGGAACTCTTGCAGCAAAGTTTCGTAATACTGGACAGACATGTGTTTGTGCAAATAGGATTCTAGTACAAGAAGGTATCTATGATAAATTTAGGGATGCTTTTGCGAAAGCTGTCCAGAATATGCAGGTTGGGAATGGCTTTAGTGAAGGTGTGGCCCAGGGTCCACTAATCAATGAAGCAGCAGTACAAAAGGTTGAATCATTTATTCAAGATGCTATATCAAAGGGAGCAAAAGTTGTTCTTGGGGCCAAAAGGCATAGCCTTGGAATGACCTTTTATGAGCCTACAGTTCTCAGTGATGTCAAGAATGATATGCTAATAGCAAGAGAGGAAGTATTTGGGCCTGTCGCACCCCTTTTGCGTTTCAAAACTGAGGACGAGGCTATCCGAATTGCTAATGACACCACTGCAGGGTTAGCTTCTTACATATTTACAAATAATGTTCAACGTTCATGGCGTGTCTCTGAAGCTCTTGAATATGGACTTGTCGGTGTCAATGAAGGCATAATTTCAACAGAGGTGGCTCCCTTTGGAGGTGTCAAACAGTCTGGTCTTGGAAGGGAAGGTTCCAAGTATGGGATGGATGAATATTTGGAAGTTAAATACGTGTGCCTGGGGAATATGAGCAGTAACTGA

Protein Analysis

527

Amino Acids

56.27

Weight (kDa)

8.72

Isoelectric Point (pI)

34.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 784, 1060
AccB7I CCANNNNNTGG 1 cut(s) 224
AciI CCGC 2 cut(s) 613, 938
AclI AACGTT 1 cut(s) 1393
AclWI GGATC 1 cut(s) 27
AcsI RAATTY 1 cut(s) 1031
AcuI CTGAAG 3 cut(s) 270, 744, 1431
AdeI CACNNNGTG 1 cut(s) 731
AfaI GTAC 3 cut(s) 646, 1011, 1131
AfiI CCNNNNNNNGG 7 cut(s) 224, 253, 254, 934, 1356, 1478, 1521
AflIII ACRYGT 3 cut(s) 493, 983, 1551
AgsI TTSAA 9 cut(s) 40, 550, 713, 1142, 1154, 1312, 1391, 1421, 1458
AjnI CCWGG 5 cut(s) 153, 584, 927, 1101, 1557
AjuI GAANNNNNNNTTGG 2 cut(s) 581, 613
Alw26I GTCTC 2 cut(s) 260, 1411
AlwI GGATC 1 cut(s) 27
AlwNI CAGNNNCTG 3 cut(s) 224, 698, 1578
AoxI GGCC 6 cut(s) 139, 157, 456, 1098, 1191, 1286
ApeKI GCWGC 8 cut(s) 326, 553, 692, 695, 854, 857, 956, 1124
ApoI RAATTY 1 cut(s) 1031
Asp700I GAANNNNTTC 1 cut(s) 757
AspS9I GGNCC 7 cut(s) 157, 456, 623, 1099, 1106, 1191, 1286
AsuC2I CCSGG 2 cut(s) 460, 729
AsuHPI GGTGA 3 cut(s) 457, 515, 748
AvaII GGWCC 2 cut(s) 623, 1106
BarI GAAGNNNNNNTAC 2 cut(s) 1113, 1145
BbvCI CCTCAGC 1 cut(s) 480
BbvI GCAGC 8 cut(s) 313, 565, 704, 707, 844, 866, 968, 1136
BccI CCATC 3 cut(s) 185, 838, 1519
BciT130I CCWGG 5 cut(s) 155, 586, 929, 1103, 1559
BcnI CCSGG 2 cut(s) 460, 729
BcoDI GTCTC 2 cut(s) 260, 1411
BfaI CTAG 1 cut(s) 1007
BfmI CTRYAG 2 cut(s) 1230, 1353
BfuAI ACCTGC 2 cut(s) 784, 1060
BisI GCNGC 8 cut(s) 327, 554, 693, 696, 855, 858, 957, 1125
BlpI GCTNAGC 1 cut(s) 699
BlsI GCNGC 8 cut(s) 328, 555, 694, 697, 856, 859, 958, 1126
Bme1390I CCNGG 7 cut(s) 155, 460, 586, 729, 929, 1103, 1559
Bme18I GGWCC 2 cut(s) 623, 1106
BmgT120I GGNCC 7 cut(s) 157, 456, 623, 1099, 1106, 1191, 1286
BmiI GGNNCC 5 cut(s) 457, 1107, 1192, 1470, 1513
BmrFI CCNGG 7 cut(s) 155, 460, 586, 729, 929, 1103, 1559
BmsI GCATC 6 cut(s) 172, 265, 763, 910, 1030, 1147
Bpu10I CCTNAGC 1 cut(s) 480
Bpu1102I GCTNAGC 1 cut(s) 699
BpuEI CTTGAG 1 cut(s) 902
BpuMI CCSGG 2 cut(s) 460, 729
BsaAI YACGTR 2 cut(s) 149, 1552
BsaJI CCNNGG 7 cut(s) 154, 405, 584, 1101, 1102, 1207, 1558
BsaXI ACNNNNNCTCC 4 cut(s) 328, 358, 1164, 1194
Bsc4I CCNNNNNNNGG 7 cut(s) 224, 253, 254, 934, 1356, 1478, 1521
Bse1I ACTGG 2 cut(s) 229, 979
Bse3DI GCAATG 1 cut(s) 901
BseBI CCWGG 5 cut(s) 155, 586, 929, 1103, 1559
BseDI CCNNGG 7 cut(s) 154, 405, 584, 1101, 1102, 1207, 1558
BseGI GGATG 6 cut(s) 109, 778, 937, 1045, 1530, 1534
BseLI CCNNNNNNNGG 7 cut(s) 224, 253, 254, 934, 1356, 1478, 1521
BseMI GCAATG 1 cut(s) 901
BseMII CTCAG 4 cut(s) 471, 690, 1252, 1308
BseNI ACTGG 2 cut(s) 229, 979
BseRI GAGGAG 3 cut(s) 66, 71, 497
BseXI GCAGC 8 cut(s) 313, 565, 704, 707, 844, 866, 968, 1136
BsgI GTGCAG 2 cut(s) 594, 873
BshFI GGCC 6 cut(s) 141, 159, 458, 1100, 1193, 1288
BsiSI CCGG 2 cut(s) 459, 728
BslFI GGGAC 2 cut(s) 230, 691
BslI CCNNNNNNNGG 7 cut(s) 224, 253, 254, 934, 1356, 1478, 1521
BsmAI GTCTC 2 cut(s) 260, 1411
BsmFI GGGAC 2 cut(s) 230, 691
BsnI GGCC 6 cut(s) 141, 159, 458, 1100, 1193, 1288
Bsp1407I TGTACA 1 cut(s) 644
Bsp143I GATC 4 cut(s) 32, 361, 529, 804
Bsp1720I GCTNAGC 1 cut(s) 699
BspACI CCGC 2 cut(s) 613, 938
BspANI GGCC 6 cut(s) 141, 159, 458, 1100, 1193, 1288
BspCNI CTCAG 4 cut(s) 472, 691, 1251, 1309
BspLI GGNNCC 5 cut(s) 457, 1107, 1192, 1470, 1513
BspMAI CTGCAG 1 cut(s) 1357
BspMI ACCTGC 2 cut(s) 784, 1060
BspPI GGATC 1 cut(s) 27
BspQI GCTCTTC 1 cut(s) 378
BsrDI GCAATG 1 cut(s) 901
BsrGI TGTACA 1 cut(s) 644
BsrI ACTGG 2 cut(s) 229, 979
BssECI CCNNGG 7 cut(s) 154, 405, 584, 1101, 1102, 1207, 1558
BssMI GATC 4 cut(s) 32, 361, 529, 804
BssT1I CCWWGG 2 cut(s) 405, 1207
Bst2UI CCWGG 5 cut(s) 155, 586, 929, 1103, 1559
Bst4CI ACNGT 6 cut(s) 244, 537, 649, 865, 1234, 1491
Bst6I CTCTTC 1 cut(s) 378
BstAUI TGTACA 1 cut(s) 644
BstBAI YACGTR 2 cut(s) 149, 1552
BstC8I GCNNGC 2 cut(s) 69, 317
BstDEI CTNAG 6 cut(s) 128, 347, 480, 699, 1238, 1317
BstF5I GGATG 6 cut(s) 109, 778, 937, 1045, 1530, 1534
BstKTI GATC 4 cut(s) 35, 364, 532, 807
BstMAI GTCTC 2 cut(s) 260, 1411
BstMBI GATC 4 cut(s) 32, 361, 529, 804
BstMWI GCNNNNNNNGC 8 cut(s) 64, 96, 296, 485, 692, 782, 854, 1361
BstNI CCWGG 5 cut(s) 155, 586, 929, 1103, 1559
BstNSI RCATGY 3 cut(s) 25, 639, 987
BstSCI CCNGG 7 cut(s) 153, 458, 584, 727, 927, 1101, 1557
BstSFI CTRYAG 2 cut(s) 1230, 1353
BstSNI TACGTA 1 cut(s) 149
BstV1I GCAGC 8 cut(s) 313, 565, 704, 707, 844, 866, 968, 1136
BsuRI GGCC 6 cut(s) 141, 159, 458, 1100, 1193, 1288
BtsCI GGATG 6 cut(s) 109, 778, 937, 1045, 1530, 1534
BtsI GCAGTG 1 cut(s) 1350
BtsIMutI CAGTG 3 cut(s) 654, 1246, 1350
BveI ACCTGC 2 cut(s) 784, 1060
Cac8I GCNNGC 2 cut(s) 69, 317
CaiI CAGNNNCTG 3 cut(s) 224, 698, 1578
Cfr13I GGNCC 7 cut(s) 157, 456, 623, 1099, 1106, 1191, 1286
CseI GACGC 1 cut(s) 3
Csp6I GTAC 3 cut(s) 645, 1010, 1130
CspCI CAANNNNNGTGG 2 cut(s) 1446, 1481
CviAII CATG 8 cut(s) 22, 64, 100, 249, 253, 636, 984, 1398
CviQI GTAC 3 cut(s) 645, 1010, 1130
DdeI CTNAG 6 cut(s) 128, 347, 480, 699, 1238, 1317
DpnI GATC 4 cut(s) 34, 363, 531, 806
DpnII GATC 4 cut(s) 32, 361, 529, 804
DraIII CACNNNGTG 1 cut(s) 731
Eam1104I CTCTTC 1 cut(s) 378
EarI CTCTTC 1 cut(s) 378
Eco105I TACGTA 1 cut(s) 149
Eco130I CCWWGG 2 cut(s) 405, 1207
Eco32I GATATC 1 cut(s) 508
Eco47I GGWCC 2 cut(s) 623, 1106
Eco57I CTGAAG 3 cut(s) 270, 744, 1431
EcoO109I RGGNCCY 1 cut(s) 157
EcoRII CCWGG 5 cut(s) 153, 584, 927, 1101, 1557
EcoRV GATATC 1 cut(s) 508
EcoT14I CCWWGG 2 cut(s) 405, 1207
EcoT22I ATGCAT 2 cut(s) 187, 254
ErhI CCWWGG 2 cut(s) 405, 1207
FaeI CATG 8 cut(s) 25, 67, 103, 252, 256, 639, 987, 1401
FalI AAGNNNNNCTT 8 cut(s) 103, 135, 372, 404, 936, 968, 1170, 1202
FaqI GGGAC 2 cut(s) 230, 691
FatI CATG 8 cut(s) 21, 63, 99, 248, 252, 635, 983, 1397
FauI CCCGC 1 cut(s) 620
FauNDI CATATG 1 cut(s) 187
Fnu4HI GCNGC 8 cut(s) 327, 554, 693, 696, 855, 858, 957, 1125
FokI GGATG 6 cut(s) 116, 785, 944, 1052, 1537, 1541
Fsp4HI GCNGC 8 cut(s) 327, 554, 693, 696, 855, 858, 957, 1125
FspBI CTAG 1 cut(s) 1007
GluI GCNGC 8 cut(s) 327, 554, 693, 696, 855, 858, 957, 1125
HaeIII GGCC 6 cut(s) 141, 159, 458, 1100, 1193, 1288
HapII CCGG 2 cut(s) 459, 728
HgaI GACGC 1 cut(s) 3
Hin1II CATG 8 cut(s) 25, 67, 103, 252, 256, 639, 987, 1401
HindIII AAGCTT 2 cut(s) 41, 317
HinfI GANTC 2 cut(s) 1003, 1142
HpaII CCGG 2 cut(s) 459, 728
HphI GGTGA 3 cut(s) 457, 515, 748
Hpy166II GTNNAC 3 cut(s) 211, 739, 1109
Hpy188I TCNGA 7 cut(s) 11, 167, 181, 529, 667, 1334, 1411
Hpy188III TCNNGA 5 cut(s) 881, 1060, 1154, 1249, 1418
Hpy8I GTNNAC 3 cut(s) 211, 739, 1109
Hpy99I CGWCG 1 cut(s) 537
HpyAV CCTTC 9 cut(s) 16, 46, 69, 719, 1010, 1085, 1439, 1497, 1502
HpyCH4III ACNGT 6 cut(s) 244, 537, 649, 865, 1234, 1491
HpyCH4IV ACGT 5 cut(s) 148, 493, 741, 1393, 1551
HpyF10VI GCNNNNNNNGC 8 cut(s) 64, 96, 296, 485, 692, 782, 854, 1361
HpyF3I CTNAG 6 cut(s) 128, 347, 480, 699, 1238, 1317
HpySE526I ACGT 5 cut(s) 148, 493, 741, 1393, 1551
Hsp92II CATG 8 cut(s) 25, 67, 103, 252, 256, 639, 987, 1401
Kzo9I GATC 4 cut(s) 32, 361, 529, 804
LguI GCTCTTC 1 cut(s) 378
LmnI GCTCC 5 cut(s) 312, 336, 409, 1172, 1474
Lsp1109I GCAGC 8 cut(s) 313, 565, 704, 707, 844, 866, 968, 1136
LweI GCATC 6 cut(s) 172, 265, 763, 910, 1030, 1147
MaeI CTAG 1 cut(s) 1007
MaeII ACGT 5 cut(s) 148, 493, 741, 1393, 1551
MaeIII GTNAC 4 cut(s) 15, 449, 577, 1574
MalI GATC 4 cut(s) 34, 363, 531, 806
MboI GATC 4 cut(s) 32, 361, 529, 804
MboII GAAGA 2 cut(s) 276, 395
MfeI CAATTG 1 cut(s) 765
MluCI AATT 6 cut(s) 304, 369, 765, 1031, 1335, 1452
MmeI TCCRAC 1 cut(s) 811
Mph1103I ATGCAT 2 cut(s) 187, 254
MroXI GAANNNNTTC 1 cut(s) 757
MseI TTAA 2 cut(s) 303, 1545
MspA1I CMGCKG 2 cut(s) 698, 857
MspI CCGG 2 cut(s) 459, 728
MspR9I CCNGG 7 cut(s) 155, 460, 586, 729, 929, 1103, 1559
MunI CAATTG 1 cut(s) 765
MvaI CCWGG 5 cut(s) 155, 586, 929, 1103, 1559
MwoI GCNNNNNNNGC 8 cut(s) 64, 96, 296, 485, 692, 782, 854, 1361
NciI CCSGG 2 cut(s) 460, 729
NdeI CATATG 1 cut(s) 187
NdeII GATC 4 cut(s) 32, 361, 529, 804
NlaIII CATG 8 cut(s) 25, 67, 103, 252, 256, 639, 987, 1401
NlaIV GGNNCC 5 cut(s) 457, 1107, 1192, 1470, 1513
NmeAIII GCCGAG 1 cut(s) 103
NmuCI GTSAC 1 cut(s) 15
NsiI ATGCAT 2 cut(s) 187, 254
NspI RCATGY 3 cut(s) 25, 639, 987
PasI CCCWGGG 1 cut(s) 1102
PciI ACATGT 1 cut(s) 983
PciSI GCTCTTC 1 cut(s) 378
PcsI WCGNNNNNNNCGW 1 cut(s) 1399
PdmI GAANNNNTTC 1 cut(s) 757
PfeI GAWTC 2 cut(s) 1003, 1142
PflMI CCANNNNNTGG 1 cut(s) 224
PkrI GCNGC 8 cut(s) 328, 555, 694, 697, 856, 859, 958, 1126
Ppu21I YACGTR 2 cut(s) 149, 1552
PscI ACATGT 1 cut(s) 983
Psp1406I AACGTT 1 cut(s) 1393
Psp6I CCWGG 5 cut(s) 153, 584, 927, 1101, 1557
PspGI CCWGG 5 cut(s) 153, 584, 927, 1101, 1557
PspN4I GGNNCC 5 cut(s) 457, 1107, 1192, 1470, 1513
PspPI GGNCC 7 cut(s) 157, 456, 623, 1099, 1106, 1191, 1286
PstI CTGCAG 1 cut(s) 1357
PstNI CAGNNNCTG 3 cut(s) 224, 698, 1578
PvuII CAGCTG 2 cut(s) 698, 857
RsaI GTAC 3 cut(s) 646, 1011, 1131
RsaNI GTAC 3 cut(s) 645, 1010, 1130
SapI GCTCTTC 1 cut(s) 378
SaqAI TTAA 2 cut(s) 303, 1545
SatI GCNGC 8 cut(s) 327, 554, 693, 696, 855, 858, 957, 1125
Sau3AI GATC 4 cut(s) 32, 361, 529, 804
Sau96I GGNCC 7 cut(s) 157, 456, 623, 1099, 1106, 1191, 1286
ScrFI CCNGG 7 cut(s) 155, 460, 586, 729, 929, 1103, 1559
SfaNI GCATC 6 cut(s) 172, 265, 763, 910, 1030, 1147
SfcI CTRYAG 2 cut(s) 1230, 1353
SinI GGWCC 2 cut(s) 623, 1106
SmlI CTYRAG 1 cut(s) 881
SmoI CTYRAG 1 cut(s) 881
SnaBI TACGTA 1 cut(s) 149
Sse9I AATT 6 cut(s) 304, 369, 765, 1031, 1335, 1452
SsiI CCGC 2 cut(s) 613, 938
SspI AATATT 1 cut(s) 1535
SspMI CTAG 1 cut(s) 1007
StyD4I CCNGG 7 cut(s) 153, 458, 584, 727, 927, 1101, 1557
StyI CCWWGG 2 cut(s) 405, 1207
TaaI ACNGT 6 cut(s) 244, 537, 649, 865, 1234, 1491
TaiI ACGT 5 cut(s) 151, 496, 744, 1396, 1554
TaqI TCGA 2 cut(s) 31, 532
TasI AATT 6 cut(s) 304, 369, 765, 1031, 1335, 1452
TatI WGTACW 3 cut(s) 644, 1009, 1129
TfiI GAWTC 2 cut(s) 1003, 1142
Tru1I TTAA 2 cut(s) 303, 1545
Tru9I TTAA 2 cut(s) 303, 1545
TscAI CASTG 3 cut(s) 654, 1246, 1357
TseFI GTSAC 1 cut(s) 15
TseI GCWGC 8 cut(s) 326, 553, 692, 695, 854, 857, 956, 1124
Tsp45I GTSAC 1 cut(s) 15
TspDTI ATGAA 4 cut(s) 1134, 1386, 1458, 1545
TspRI CASTG 3 cut(s) 654, 1246, 1357
Van91I CCANNNNNTGG 1 cut(s) 224
VpaK11BI GGWCC 2 cut(s) 623, 1106
XapI RAATTY 1 cut(s) 1031
XceI RCATGY 3 cut(s) 25, 639, 987
XcmI CCANNNNNNNNNTGG 1 cut(s) 1522
XmnI GAANNNNTTC 1 cut(s) 757
XspI CTAG 1 cut(s) 1007
Zsp2I ATGCAT 2 cut(s) 187, 254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.