Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0007619

Physical Location & Seq

Genomic Coordinates Forward (+)

39002198 .. 39007076

Gene Structure 4879 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1303600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGCGAGGTTTCGCTTTCTTCGACCGAGTTTCTAAAGCCTTCCATGATTATCCTAAGGCTTCCAAAATGCTCGTCGTCGTCGCCGTCAGTGGCGGTGGCTATGTGGCTTACGCTGAGGCAACCCCTGAGCCAAAACTGATCAGCAGCGCGCCTGTCATAGATCAAGTGGACAATAAGAAACAGAAGATTGTGGTACTTGGAACTGGCTGGGCTGGAACAAGTTTCTTGAGGAATCTGAAAAATCCCAACTATGAGGTTCAGATCATATCACCTCGGAATTACTTTGCCTTCACCCCTCTGCTACCAAGCGTTACCTGTGGTACAGTGGAAGCTCGCAGCATTGTTGAACCCATTCGAAACATTGTTAGAAAGAAAAATGTGGACGTTCAATTCACTGAAGCTGCGTGTCTGAAGATCGATGCACAAAACAATAAAATCTATTGCCATTCTAATCTAGAAAACAATTTGGATGGACAAGAAGAGTTTGTTGTGGATTATGACTACCTTATTATAGCTGTGGGAGCCAATGTTAATACATTCAATACTCCTGGTGTGATGGAGAACTGCCACTTCTTGAAGGAAGTGGAAGATGCTCAAAAGATTCGAAGGACTGTTATTGACTGCTTTGAAAAGGCAAGCCTTCCAACTGTAAGCGATGAGGAGAAGAAGAGAATTCTTCATTTTGCTGTTGTCGGGGGTGGCCCAACTGGTGTGGAATTTGCTGCAGAACTTCATGATTTTGTCAACGAGGATTTGGTCAAATTGTATCCCGGGGTCAAGGATCTAGTTAGAATTACAATTCTCGAGGCTGGAGATCATATTCTGAATATGTTTGACAAAAGAATCACATCTTTTGCTGAAGAAAAGTTTCAAAGAGAGGGTATTGATCTGAAAACAGGATCCATGGTTGTGAAAGTAACTGATAAAGAAATCTTTACCAAGGAAATGAAAAATGGCGGGGAAGTATCTGCTATGCCTTATGGAATGGCTCTCTGGTCAACTGGTATTGGAACGCGTCCTTTCATAAAGGATTTCATGACTCAAGTTGGTCAGGGTAATCGACGGGCTTTAGCAACTGATGAATGGCTGCGTGTGGAGGGATGCGACAAAGTGTATGCAATTGGTGATTGTGCCACAATAAATCAGCGCAAAGTCATGGAGGATATTGCTGCCATATTCCGCAAAACGGACAAGGATAATTCAGGAACACTTACAATCGACGAGTATGAAGAAGTGATTAAGGATATCTGTGAAAGGTATCCTCAGGTGGAGCTTTATCTGAAGAGCAAACAGATGAAAAATATGGTTGATCTTTTGAAGGAAACAACGGATGTTTCAAAAGGAAATGTGGAGTTTAATATTGAAGATTTCAAGACCGCTCTTTCTAAAGTGGATTCCCAGATGAAAAATCTTCCAGCCACAGCCCAGGTTGCTGCTCAACAAGGTGTCTACCTTGCCAAGTGTTTCAACCGTATGGAAGAGGCTGAGAAAAATCCTGAAGGTCCTCTCAGGTTCCGTGGAGAAGGTCGCCATCGGTTTCGACCCTTTAGGTACAAGCATCTGGGGCAGTTTGCTCCATTGGGTGGAGAGCAGACAGCAGCTCAGCTTCCTGGAGATTGGGTTTCCATTGGTCATAGCTCCCAGTGGCTTTGGTATTCTGTTTACGCTAGCAAACAAGTGAGCTGGCGCAACAGGTCACTGGTGGTAACGGACTGGGCTAGGCGTTTCATCTGGGGGAGGGACTCGAGTCGCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003954 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005758 GO:0006091 GO:0006116 GO:0006119 GO:0006139 GO:0006163 GO:0006725 GO:0006732 GO:0006733 GO:0006734 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008137 GO:0008150 GO:0008152 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009987 GO:0015980 GO:0016020 GO:0016310 GO:0016491 GO:0016651 GO:0016655 GO:0017144 GO:0019362 GO:0019637 GO:0019674 GO:0019693 GO:0019866 GO:0022900 GO:0022904 GO:0031090 GO:0031966 GO:0031967 GO:0031970 GO:0031974 GO:0031975 GO:0034641 GO:0042773 GO:0042775 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045333 GO:0046034 GO:0046483 GO:0046496 GO:0050136 GO:0051186 GO:0055086 GO:0055114 GO:0070013 GO:0071704 GO:0072521 GO:0072524 GO:1901135 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EF-hand_1 Pyr_redox_2

Protein Analysis

586

Amino Acids

66.04

Weight (kDa)

7.1

Isoelectric Point (pI)

33.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyr_redox_2	PF07992	62 - 384	2e-54	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox	PF00070	227 - 309	5.9e-10	Pyridine nucleotide-disulphide oxidoreductase
NDH2_C	PF22366	520 - 581	2.5e-14	NDH2 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007619)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G05020 AT4G05020 AT4G21490 AT4G21490
fragaria_vesca	FvH4_3g03960 FvH4_3g03960 FvH4_3g03960
malus_domestica	MD05G1325700.v1.1 MD10G1303600.v1.1
prunus_persica	Prupe.4G037100_v2.0.a1
pyrus_communis	pycom05g29980 pycom05g29990 pycom10g25610
rosa_chinensis	RchiOBHm_Chr5g0006291 RchiOBHm_Chr7g0225061
rosa_laevigata	RLG00000031367
rosa_multiflora	Rmu_sc0009466.1_g000004
rosa_roxburghii	Rroxscaffold_1G00069700
rosa_rugosa	Rorug04G0420800
rosa_samantha	Rh5AG048600 Rh5BG047700 Rh5CG056100 Rh5DG046900
rosa_wichuraiana	Rw5G004850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1583
AccBSI	CCGCTC	1 cut(s)	1379
AccI	GTMKAC	1 cut(s)	1449
AccII	CGCG	2 cut(s)	149, 1015
AciI	CCGC	4 cut(s)	93, 957, 1180, 1377
AclWI	GGATC	3 cut(s)	789, 894, 907
AcsI	RAATTY	2 cut(s)	672, 716
AcuI	CTGAAG	5 cut(s)	417, 431, 879, 1301, 1518
AfaI	GTAC	3 cut(s)	195, 322, 1553
AfiI	CCNNNNNNNGG	2 cut(s)	1186, 1583
AflIII	ACRYGT	1 cut(s)	1013
AjnI	CCWGG	3 cut(s)	547, 1425, 1609
AluBI	AGCT	8 cut(s)	332, 401, 515, 1273, 1601, 1606, 1638, 1683
AluI	AGCT	8 cut(s)	332, 401, 515, 1273, 1601, 1606, 1638, 1683
AlwI	GGATC	3 cut(s)	789, 894, 907
Ama87I	CYCGRG	3 cut(s)	770, 803, 1744
AoxI	GGCC	1 cut(s)	700
ApeKI	GCWGC	8 cut(s)	144, 336, 401, 722, 1087, 1169, 1433, 1598
ApoI	RAATTY	2 cut(s)	672, 716
ArsI	GACNNNNNNTTYG	2 cut(s)	57, 89
Asp700I	GAANNNNTTC	2 cut(s)	351, 867
AspLEI	GCGC	4 cut(s)	149, 151, 1149, 1689
AspS9I	GGNCC	2 cut(s)	701, 1502
AsuC2I	CCSGG	2 cut(s)	771, 772
AsuHPI	GGTGA	3 cut(s)	261, 283, 1136
AsuII	TTCGAA	2 cut(s)	355, 604
AsuNHI	GCTAGC	1 cut(s)	1667
AvaI	CYCGRG	3 cut(s)	770, 803, 1744
AvaII	GGWCC	1 cut(s)	1502
AxyI	CCTNAGG	2 cut(s)	54, 1263
BamHI	GGATCC	1 cut(s)	899
BbvCI	CCTCAGC	1 cut(s)	114
BbvI	GCAGC	8 cut(s)	156, 348, 388, 709, 1074, 1156, 1420, 1610
BccI	CCATC	3 cut(s)	464, 550, 1539
BceAI	ACGGC	1 cut(s)	68
BciT130I	CCWGG	3 cut(s)	549, 1427, 1611
BciVI	GTATCC	2 cut(s)	777, 1269
BclI	TGATCA	1 cut(s)	138
BcnI	CCSGG	2 cut(s)	771, 772
BfaI	CTAG	4 cut(s)	455, 785, 1668, 1719
BfmI	CTRYAG	1 cut(s)	723
BfuI	GTATCC	2 cut(s)	777, 1269
BisI	GCNGC	8 cut(s)	145, 337, 402, 723, 1088, 1170, 1434, 1599
BlpI	GCTNAGC	1 cut(s)	1602
BlsI	GCNGC	8 cut(s)	146, 338, 403, 724, 1089, 1171, 1435, 1600
Bme1390I	CCNGG	5 cut(s)	549, 771, 772, 1427, 1611
Bme18I	GGWCC	1 cut(s)	1502
BmeT110I	CYCGRG	3 cut(s)	770, 803, 1744
BmgT120I	GGNCC	2 cut(s)	701, 1502
BmiI	GGNNCC	3 cut(s)	523, 901, 1514
BmrFI	CCNGG	5 cut(s)	549, 771, 772, 1427, 1611
BmrI	ACTGGG	2 cut(s)	1636, 1723
BmsI	GCATC	4 cut(s)	409, 580, 1091, 1567
BmtI	GCTAGC	1 cut(s)	1671
BmuI	ACTGGG	2 cut(s)	1636, 1723
BoxI	GACNNNNGTC	1 cut(s)	1746
BpmI	CTGGAG	2 cut(s)	831, 1632
Bpu10I	CCTNAGC	2 cut(s)	114, 126
Bpu1102I	GCTNAGC	1 cut(s)	1602
Bpu14I	TTCGAA	2 cut(s)	355, 604
BpuEI	CTTGAG	2 cut(s)	247, 1026
BpuMI	CCSGG	2 cut(s)	771, 772
Bsa29I	ATCGAT	1 cut(s)	417
BsaJI	CCNNGG	7 cut(s)	272, 770, 771, 903, 939, 1425, 1516
BsaXI	ACNNNNNCTCC	4 cut(s)	513, 543, 1605, 1635
Bsc4I	CCNNNNNNNGG	2 cut(s)	1186, 1583
Bse1I	ACTGG	6 cut(s)	208, 712, 1006, 1642, 1704, 1718
Bse21I	CCTNAGG	2 cut(s)	54, 1263
BseBI	CCWGG	3 cut(s)	549, 1427, 1611
BseCI	ATCGAT	1 cut(s)	417
BseDI	CCNNGG	7 cut(s)	272, 770, 771, 903, 939, 1425, 1516
BseGI	GGATG	3 cut(s)	475, 1106, 1336
BseLI	CCNNNNNNNGG	2 cut(s)	1186, 1583
BseMII	CTCAG	6 cut(s)	105, 117, 1277, 1476, 1522, 1616
BseNI	ACTGG	6 cut(s)	208, 712, 1006, 1642, 1704, 1718
BsePI	GCGCGC	1 cut(s)	147
BseRI	GAGGAG	1 cut(s)	674
BseXI	GCAGC	8 cut(s)	156, 348, 388, 709, 1074, 1156, 1420, 1610
BseYI	CCCAGC	1 cut(s)	207
Bsh1236I	CGCG	2 cut(s)	149, 1015
Bsh1285I	CGRYCG	1 cut(s)	25
BshFI	GGCC	1 cut(s)	702
BshVI	ATCGAT	1 cut(s)	417
BsiEI	CGRYCG	1 cut(s)	25
BsiHKCI	CYCGRG	3 cut(s)	770, 803, 1744
BsiSI	CCGG	1 cut(s)	771
BslFI	GGGAC	1 cut(s)	1754
BslI	CCNNNNNNNGG	2 cut(s)	1186, 1583
BsmFI	GGGAC	1 cut(s)	1754
BsnI	GGCC	1 cut(s)	702
BsoBI	CYCGRG	3 cut(s)	770, 803, 1744
Bsp119I	TTCGAA	2 cut(s)	355, 604
Bsp143I	GATC	9 cut(s)	138, 160, 261, 414, 781, 814, 886, 899, 1309
Bsp1720I	GCTNAGC	1 cut(s)	1602
Bsp19I	CCATGG	1 cut(s)	903
BspACI	CCGC	4 cut(s)	93, 957, 1180, 1377
BspANI	GGCC	1 cut(s)	702
BspCNI	CTCAG	6 cut(s)	106, 118, 1276, 1477, 1521, 1615
BspDI	ATCGAT	1 cut(s)	417
BspFNI	CGCG	2 cut(s)	149, 1015
BspHI	TCATGA	2 cut(s)	733, 1035
BspLI	GGNNCC	3 cut(s)	523, 901, 1514
BspMAI	CTGCAG	1 cut(s)	727
BspOI	GCTAGC	1 cut(s)	1671
BspPI	GGATC	3 cut(s)	789, 894, 907
BspQI	GCTCTTC	1 cut(s)	1277
BspT104I	TTCGAA	2 cut(s)	355, 604
BsrBI	CCGCTC	1 cut(s)	1379
BsrI	ACTGG	6 cut(s)	208, 712, 1006, 1642, 1704, 1718
BssECI	CCNNGG	7 cut(s)	272, 770, 771, 903, 939, 1425, 1516
BssHII	GCGCGC	1 cut(s)	147
BssMI	GATC	9 cut(s)	138, 160, 261, 414, 781, 814, 886, 899, 1309
BssT1I	CCWWGG	2 cut(s)	903, 939
Bst2UI	CCWGG	3 cut(s)	549, 1427, 1611
Bst4CI	ACNGT	4 cut(s)	325, 613, 649, 1472
Bst6I	CTCTTC	4 cut(s)	474, 662, 1277, 1473
BstBI	TTCGAA	2 cut(s)	355, 604
BstC8I	GCNNGC	5 cut(s)	149, 334, 637, 1669, 1685
BstDEI	CTNAG	7 cut(s)	54, 114, 126, 1263, 1485, 1508, 1602
BstDSI	CCRYGG	2 cut(s)	903, 1516
BstF5I	GGATG	3 cut(s)	475, 1106, 1336
BstFNI	CGCG	2 cut(s)	149, 1015
BstHHI	GCGC	4 cut(s)	149, 151, 1149, 1689
BstKTI	GATC	9 cut(s)	141, 163, 264, 417, 784, 817, 889, 902, 1312
BstMBI	GATC	9 cut(s)	138, 160, 261, 414, 781, 814, 886, 899, 1309
BstMCI	CGRYCG	1 cut(s)	25
BstMWI	GCNNNNNNNGC	3 cut(s)	521, 1430, 1564
BstNI	CCWGG	3 cut(s)	549, 1427, 1611
BstPAI	GACNNNNGTC	1 cut(s)	1746
BstSCI	CCNGG	5 cut(s)	547, 769, 770, 1425, 1609
BstSFI	CTRYAG	1 cut(s)	723
BstUI	CGCG	2 cut(s)	149, 1015
BstV1I	GCAGC	8 cut(s)	156, 348, 388, 709, 1074, 1156, 1420, 1610
BstX2I	RGATCY	2 cut(s)	781, 899
BstYI	RGATCY	2 cut(s)	781, 899
Bsu15I	ATCGAT	1 cut(s)	417
Bsu36I	CCTNAGG	2 cut(s)	54, 1263
BsuI	GTATCC	2 cut(s)	777, 1269
BsuRI	GGCC	1 cut(s)	702
BsuTUI	ATCGAT	1 cut(s)	417
BtgI	CCRYGG	2 cut(s)	903, 1516
BtgZI	GCGATG	1 cut(s)	669
BtsCI	GGATG	3 cut(s)	475, 1106, 1336
BtsIMutI	CAGTG	5 cut(s)	94, 330, 393, 1649, 1697
Cac8I	GCNNGC	5 cut(s)	149, 334, 637, 1669, 1685
CciI	TCATGA	2 cut(s)	733, 1035
CfoI	GCGC	4 cut(s)	149, 151, 1149, 1689
Cfr13I	GGNCC	2 cut(s)	701, 1502
Cfr9I	CCCGGG	1 cut(s)	770
ClaI	ATCGAT	1 cut(s)	417
CseI	GACGC	1 cut(s)	1004
Csp6I	GTAC	3 cut(s)	194, 321, 1552
CspCI	CAANNNNNGTGG	2 cut(s)	693, 728
CviAII	CATG	5 cut(s)	44, 734, 904, 1036, 1156
CviQI	GTAC	3 cut(s)	194, 321, 1552
DdeI	CTNAG	7 cut(s)	54, 114, 126, 1263, 1485, 1508, 1602
DpnI	GATC	9 cut(s)	140, 162, 263, 416, 783, 816, 888, 901, 1311
DpnII	GATC	9 cut(s)	138, 160, 261, 414, 781, 814, 886, 899, 1309
Eam1104I	CTCTTC	4 cut(s)	474, 662, 1277, 1473
EarI	CTCTTC	4 cut(s)	474, 662, 1277, 1473
Eco130I	CCWWGG	2 cut(s)	903, 939
Eco32I	GATATC	1 cut(s)	1246
Eco47I	GGWCC	1 cut(s)	1502
Eco57I	CTGAAG	5 cut(s)	417, 431, 879, 1301, 1518
Eco81I	CCTNAGG	2 cut(s)	54, 1263
Eco88I	CYCGRG	3 cut(s)	770, 803, 1744
EcoO109I	RGGNCCY	1 cut(s)	1502
EcoRI	GAATTC	1 cut(s)	672
EcoRII	CCWGG	3 cut(s)	547, 1425, 1609
EcoRV	GATATC	1 cut(s)	1246
EcoT14I	CCWWGG	2 cut(s)	903, 939
ErhI	CCWWGG	2 cut(s)	903, 939
FaeI	CATG	5 cut(s)	47, 737, 907, 1039, 1159
FaqI	GGGAC	1 cut(s)	1754
FatI	CATG	5 cut(s)	43, 733, 903, 1035, 1155
FauI	CCCGC	1 cut(s)	950
FbaI	TGATCA	1 cut(s)	138
FblI	GTMKAC	1 cut(s)	1449
Fnu4HI	GCNGC	8 cut(s)	145, 337, 402, 723, 1088, 1170, 1434, 1599
FokI	GGATG	3 cut(s)	482, 1113, 1343
Fsp4HI	GCNGC	8 cut(s)	145, 337, 402, 723, 1088, 1170, 1434, 1599
FspBI	CTAG	4 cut(s)	455, 785, 1668, 1719
GlaI	GCGC	4 cut(s)	148, 150, 1148, 1688
GluI	GCNGC	8 cut(s)	145, 337, 402, 723, 1088, 1170, 1434, 1599
GsaI	CCCAGC	1 cut(s)	211
GsuI	CTGGAG	2 cut(s)	831, 1632
HaeIII	GGCC	1 cut(s)	702
HapII	CCGG	1 cut(s)	771
HgaI	GACGC	1 cut(s)	1004
HhaI	GCGC	4 cut(s)	149, 151, 1149, 1689
Hin1II	CATG	5 cut(s)	47, 737, 907, 1039, 1159
Hin6I	GCGC	4 cut(s)	147, 149, 1147, 1687
HinP1I	GCGC	4 cut(s)	147, 149, 1147, 1687
HincII	GTYRAC	2 cut(s)	745, 999
HindII	GTYRAC	2 cut(s)	745, 999
HinfI	GANTC	7 cut(s)	232, 601, 843, 1039, 1394, 1742, 1747
HpaII	CCGG	1 cut(s)	771
HphI	GGTGA	3 cut(s)	261, 283, 1136
Hpy166II	GTNNAC	6 cut(s)	169, 382, 745, 999, 1450, 1663
Hpy188I	TCNGA	7 cut(s)	237, 261, 276, 411, 825, 891, 1281
Hpy188III	TCNNGA	9 cut(s)	226, 455, 574, 734, 803, 1036, 1203, 1372, 1496
Hpy8I	GTNNAC	6 cut(s)	169, 382, 745, 999, 1450, 1663
Hpy99I	CGWCG	5 cut(s)	77, 80, 83, 1065, 1223
HpyAV	CCTTC	8 cut(s)	49, 298, 571, 600, 650, 1312, 1493, 1517
HpyCH4III	ACNGT	4 cut(s)	325, 613, 649, 1472
HpyCH4IV	ACGT	1 cut(s)	384
HpyCH4V	TGCA	3 cut(s)	422, 725, 1118
HpyF10VI	GCNNNNNNNGC	3 cut(s)	521, 1430, 1564
HpyF3I	CTNAG	7 cut(s)	54, 114, 126, 1263, 1485, 1508, 1602
HpySE526I	ACGT	1 cut(s)	384
Hsp92II	CATG	5 cut(s)	47, 737, 907, 1039, 1159
HspAI	GCGC	4 cut(s)	147, 149, 1147, 1687
Ksp22I	TGATCA	1 cut(s)	138
Kzo9I	GATC	9 cut(s)	138, 160, 261, 414, 781, 814, 886, 899, 1309
LguI	GCTCTTC	1 cut(s)	1277
LmnI	GCTCC	4 cut(s)	521, 1270, 1579, 1643
Lsp1109I	GCAGC	8 cut(s)	156, 348, 388, 709, 1074, 1156, 1420, 1610
LweI	GCATC	4 cut(s)	409, 580, 1091, 1567
MaeI	CTAG	4 cut(s)	455, 785, 1668, 1719
MaeII	ACGT	1 cut(s)	384
MaeIII	GTNAC	4 cut(s)	310, 916, 1695, 1705
MalI	GATC	9 cut(s)	140, 162, 263, 416, 783, 816, 888, 901, 1311
MbiI	CCGCTC	1 cut(s)	1379
MboI	GATC	9 cut(s)	138, 160, 261, 414, 781, 814, 886, 899, 1309
MfeI	CAATTG	1 cut(s)	1119
MflI	RGATCY	2 cut(s)	781, 899
MluI	ACGCGT	1 cut(s)	1013
MlyI	GAGTC	3 cut(s)	1033, 1736, 1756
MmeI	TCCRAC	1 cut(s)	668
MroXI	GAANNNNTTC	2 cut(s)	351, 867
MseI	TTAA	3 cut(s)	531, 1239, 1356
MslI	CAYNNNNRTG	1 cut(s)	908
MspI	CCGG	1 cut(s)	771
MspR9I	CCNGG	5 cut(s)	549, 771, 772, 1427, 1611
MunI	CAATTG	1 cut(s)	1119
MvaI	CCWGG	3 cut(s)	549, 1427, 1611
MvnI	CGCG	2 cut(s)	149, 1015
MwoI	GCNNNNNNNGC	3 cut(s)	521, 1430, 1564
NciI	CCSGG	2 cut(s)	771, 772
NcoI	CCATGG	1 cut(s)	903
NdeII	GATC	9 cut(s)	138, 160, 261, 414, 781, 814, 886, 899, 1309
NheI	GCTAGC	1 cut(s)	1667
NlaIII	CATG	5 cut(s)	47, 737, 907, 1039, 1159
NlaIV	GGNNCC	3 cut(s)	523, 901, 1514
NmuCI	GTSAC	1 cut(s)	1695
NspV	TTCGAA	2 cut(s)	355, 604
PaeR7I	CTCGAG	2 cut(s)	803, 1744
PagI	TCATGA	2 cut(s)	733, 1035
PauI	GCGCGC	1 cut(s)	147
PciSI	GCTCTTC	1 cut(s)	1277
PcsI	WCGNNNNNNNCGW	2 cut(s)	18, 81
PdmI	GAANNNNTTC	2 cut(s)	351, 867
PfeI	GAWTC	4 cut(s)	232, 601, 843, 1394
PflMI	CCANNNNNTGG	1 cut(s)	1583
PfoI	TCCNGGA	1 cut(s)	1609
PkrI	GCNGC	8 cut(s)	146, 338, 403, 724, 1089, 1171, 1435, 1600
PleI	GAGTC	3 cut(s)	1033, 1736, 1755
PpsI	GAGTC	3 cut(s)	1033, 1736, 1755
PpuMI	RGGWCCY	1 cut(s)	1502
PshAI	GACNNNNGTC	1 cut(s)	1746
Psp5II	RGGWCCY	1 cut(s)	1502
Psp6I	CCWGG	3 cut(s)	547, 1425, 1609
PspFI	CCCAGC	1 cut(s)	207
PspGI	CCWGG	3 cut(s)	547, 1425, 1609
PspN4I	GGNNCC	3 cut(s)	523, 901, 1514
PspPI	GGNCC	2 cut(s)	701, 1502
PspPPI	RGGWCCY	1 cut(s)	1502
PspXI	VCTCGAGB	1 cut(s)	1744
PstI	CTGCAG	1 cut(s)	727
PsuI	RGATCY	2 cut(s)	781, 899
PteI	GCGCGC	1 cut(s)	147
RsaI	GTAC	3 cut(s)	195, 322, 1553
RsaNI	GTAC	3 cut(s)	194, 321, 1552
RseI	CAYNNNNRTG	1 cut(s)	908
SapI	GCTCTTC	1 cut(s)	1277
SaqAI	TTAA	3 cut(s)	531, 1239, 1356
SatI	GCNGC	8 cut(s)	145, 337, 402, 723, 1088, 1170, 1434, 1599
Sau3AI	GATC	9 cut(s)	138, 160, 261, 414, 781, 814, 886, 899, 1309
Sau96I	GGNCC	2 cut(s)	701, 1502
SchI	GAGTC	3 cut(s)	1033, 1736, 1756
ScrFI	CCNGG	5 cut(s)	549, 771, 772, 1427, 1611
SfaNI	GCATC	4 cut(s)	409, 580, 1091, 1567
SfcI	CTRYAG	1 cut(s)	723
Sfr274I	CTCGAG	2 cut(s)	803, 1744
SfuI	TTCGAA	2 cut(s)	355, 604
SinI	GGWCC	1 cut(s)	1502
SlaI	CTCGAG	2 cut(s)	803, 1744
SmaI	CCCGGG	1 cut(s)	772
SmiMI	CAYNNNNRTG	1 cut(s)	908
SmlI	CTYRAG	4 cut(s)	226, 803, 1041, 1744
SmoI	CTYRAG	4 cut(s)	226, 803, 1041, 1744
SsiI	CCGC	4 cut(s)	93, 957, 1180, 1377
SspI	AATATT	1 cut(s)	1360
SspMI	CTAG	4 cut(s)	455, 785, 1668, 1719
StyD4I	CCNGG	5 cut(s)	547, 769, 770, 1425, 1609
StyI	CCWWGG	2 cut(s)	903, 939
TaaI	ACNGT	4 cut(s)	325, 613, 649, 1472
TaiI	ACGT	1 cut(s)	387
TaqI	TCGA	9 cut(s)	21, 355, 417, 604, 804, 1060, 1218, 1540, 1745
TaqII	GACCGA	1 cut(s)	39
TfiI	GAWTC	4 cut(s)	232, 601, 843, 1394
Tru1I	TTAA	3 cut(s)	531, 1239, 1356
Tru9I	TTAA	3 cut(s)	531, 1239, 1356
TscAI	CASTG	5 cut(s)	94, 330, 400, 1649, 1704
TseFI	GTSAC	1 cut(s)	1695
TseI	GCWGC	8 cut(s)	144, 336, 401, 722, 1087, 1169, 1433, 1598
Tsp45I	GTSAC	1 cut(s)	1695
TspGWI	ACGGA	4 cut(s)	1202, 1343, 1505, 1724
TspMI	CCCGGG	1 cut(s)	770
TspRI	CASTG	5 cut(s)	94, 330, 400, 1649, 1704
Van91I	CCANNNNNTGG	1 cut(s)	1583
VpaK11BI	GGWCC	1 cut(s)	1502
XapI	RAATTY	2 cut(s)	672, 716
XbaI	TCTAGA	1 cut(s)	454
XhoI	CTCGAG	2 cut(s)	803, 1744
XmaI	CCCGGG	1 cut(s)	770
XmiI	GTMKAC	1 cut(s)	1449
XmnI	GAANNNNTTC	2 cut(s)	351, 867
XspI	CTAG	4 cut(s)	455, 785, 1668, 1719

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.