MD11G1009200.v1.1

acyl-activating enzyme 18

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
757758 .. 760560
2803 bp
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UTR
Exon/CDS
Intron
MD11G1009200.v1.1.491

Sequence Viewer

Length: 279 bp
ATGCACCCGAAAGAGATATGGCGGCAGATAGTGGCTGAGAGCTTGCTGAAAGCATCACACACTCATGACGTGCACCAGTTGATCTACTACTCAGTCTATGCCAATTGGGATGCCACCACCAAAGGCCGTCCCCTCTACTGGTTCCCTTCTCGGTTGGTGGCTAATGCACTGGATACAACCTTCTCAAAGGGTGATGCAATTGCTATTGACATGCTAATGACAGTCGATGCAGTTATCATATGTTTAGCAATCGTACTAGCAGGATTGTTGTCTCAATAG

Protein Analysis

93

Amino Acids

10.33

Weight (kDa)

6.38

Isoelectric Point (pI)

27.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 22
AfaI GTAC 1 cut(s) 255
AfiI CCNNNNNNNGG 1 cut(s) 138
AjiI CACGTC 1 cut(s) 70
AluBI AGCT 1 cut(s) 42
AluI AGCT 1 cut(s) 42
Alw21I GWGCWC 1 cut(s) 75
Alw44I GTGCAC 1 cut(s) 71
AoxI GGCC 1 cut(s) 124
ApaLI GTGCAC 1 cut(s) 71
AsuHPI GGTGA 1 cut(s) 203
BaeGI GKGCMC 1 cut(s) 75
Bbv12I GWGCWC 1 cut(s) 75
BceAI ACGGC 1 cut(s) 111
BciVI GTATCC 1 cut(s) 166
BfaI CTAG 1 cut(s) 257
BfuI GTATCC 1 cut(s) 166
BisI GCNGC 1 cut(s) 23
BlsI GCNGC 1 cut(s) 24
BmgBI CACGTC 1 cut(s) 70
BmiI GGNNCC 1 cut(s) 143
BmsI GCATC 4 cut(s) 62, 100, 184, 217
Bsc4I CCNNNNNNNGG 1 cut(s) 138
Bse1I ACTGG 3 cut(s) 76, 143, 174
BseGI GGATG 1 cut(s) 115
BseLI CCNNNNNNNGG 1 cut(s) 138
BseMII CTCAG 2 cut(s) 27, 105
BseNI ACTGG 3 cut(s) 76, 143, 174
BseSI GKGCMC 1 cut(s) 75
BshFI GGCC 1 cut(s) 126
BsiHKAI GWGCWC 1 cut(s) 75
BslFI GGGAC 1 cut(s) 114
BslI CCNNNNNNNGG 1 cut(s) 138
BsmFI GGGAC 1 cut(s) 114
BsnI GGCC 1 cut(s) 126
Bsp1286I GDGCHC 1 cut(s) 75
Bsp143I GATC 1 cut(s) 81
BspACI CCGC 1 cut(s) 22
BspANI GGCC 1 cut(s) 126
BspCNI CTCAG 2 cut(s) 28, 104
BspHI TCATGA 1 cut(s) 64
BspLI GGNNCC 1 cut(s) 143
BsrI ACTGG 3 cut(s) 76, 143, 174
BssMI GATC 1 cut(s) 81
Bst4CI ACNGT 1 cut(s) 223
BstC8I GCNNGC 1 cut(s) 44
BstDEI CTNAG 2 cut(s) 36, 91
BstF5I GGATG 1 cut(s) 115
BstKTI GATC 1 cut(s) 84
BstMBI GATC 1 cut(s) 81
BstNSI RCATGY 1 cut(s) 214
BstSLI GKGCMC 1 cut(s) 75
BsuI GTATCC 1 cut(s) 166
BsuRI GGCC 1 cut(s) 126
BtrI CACGTC 1 cut(s) 70
BtsCI GGATG 1 cut(s) 115
BtsIMutI CAGTG 1 cut(s) 167
Cac8I GCNNGC 1 cut(s) 44
CciI TCATGA 1 cut(s) 64
Csp6I GTAC 1 cut(s) 254
CviAII CATG 2 cut(s) 65, 211
CviJI RGCY 4 cut(s) 35, 42, 126, 161
CviKI_1 RGCY 4 cut(s) 35, 42, 126, 161
CviQI GTAC 1 cut(s) 254
DdeI CTNAG 2 cut(s) 36, 91
DpnI GATC 1 cut(s) 83
DpnII GATC 1 cut(s) 81
FaeI CATG 2 cut(s) 68, 214
FaiI YATR 6 cut(s) 19, 66, 99, 212, 239, 241
FaqI GGGAC 1 cut(s) 114
FatI CATG 2 cut(s) 64, 210
FauNDI CATATG 1 cut(s) 239
Fnu4HI GCNGC 1 cut(s) 23
FokI GGATG 1 cut(s) 122
Fsp4HI GCNGC 1 cut(s) 23
FspBI CTAG 1 cut(s) 257
GluI GCNGC 1 cut(s) 23
HaeIII GGCC 1 cut(s) 126
Hin1II CATG 2 cut(s) 68, 214
HphI GGTGA 1 cut(s) 203
Hpy166II GTNNAC 1 cut(s) 73
Hpy188III TCNNGA 1 cut(s) 65
Hpy8I GTNNAC 1 cut(s) 73
HpyAV CCTTC 2 cut(s) 156, 190
HpyCH4III ACNGT 1 cut(s) 223
HpyCH4IV ACGT 1 cut(s) 69
HpyCH4V TGCA 5 cut(s) 4, 73, 167, 197, 230
HpyF3I CTNAG 2 cut(s) 36, 91
HpySE526I ACGT 1 cut(s) 69
Hsp92II CATG 2 cut(s) 68, 214
Kzo9I GATC 1 cut(s) 81
LpnPI CCDG 4 cut(s) 89, 124, 155, 246
LweI GCATC 4 cut(s) 62, 100, 184, 217
MaeI CTAG 1 cut(s) 257
MaeII ACGT 1 cut(s) 69
MalI GATC 1 cut(s) 83
MboI GATC 1 cut(s) 81
MfeI CAATTG 2 cut(s) 103, 198
MhlI GDGCHC 1 cut(s) 75
MluCI AATT 2 cut(s) 103, 198
MnlI CCTC 1 cut(s) 143
MslI CAYNNNNRTG 2 cut(s) 63, 215
MunI CAATTG 2 cut(s) 103, 198
NdeI CATATG 1 cut(s) 239
NdeII GATC 1 cut(s) 81
NlaIII CATG 2 cut(s) 68, 214
NlaIV GGNNCC 1 cut(s) 143
NspI RCATGY 1 cut(s) 214
PagI TCATGA 1 cut(s) 64
PkrI GCNGC 1 cut(s) 24
PspN4I GGNNCC 1 cut(s) 143
RsaI GTAC 1 cut(s) 255
RsaNI GTAC 1 cut(s) 254
RseI CAYNNNNRTG 2 cut(s) 63, 215
SatI GCNGC 1 cut(s) 23
Sau3AI GATC 1 cut(s) 81
SduI GDGCHC 1 cut(s) 75
SetI ASST 3 cut(s) 44, 72, 182
SfaNI GCATC 4 cut(s) 62, 100, 184, 217
SmiMI CAYNNNNRTG 2 cut(s) 63, 215
Sse9I AATT 2 cut(s) 103, 198
SsiI CCGC 1 cut(s) 22
SspMI CTAG 1 cut(s) 257
TaaI ACNGT 1 cut(s) 223
TaiI ACGT 1 cut(s) 72
TaqI TCGA 1 cut(s) 225
TasI AATT 2 cut(s) 103, 198
TauI GCSGC 1 cut(s) 25
TscAI CASTG 1 cut(s) 174
TspRI CASTG 1 cut(s) 174
VneI GTGCAC 1 cut(s) 71
XceI RCATGY 1 cut(s) 214
XspI CTAG 1 cut(s) 257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.