No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G11591 |
| fragaria_vesca | FvH4_3g23810 |
| malus_domestica | MD03G1190100.v1.1 MD11G1206600.v1.1 MD14G1032500.v1.1 |
| prunus_persica | Prupe.4G229900_v2.0.a1 Prupe.7G100100_v2.0.a1 |
| pyrus_communis | pycom11g17970 |
| rosa_chinensis | RchiOBHm_Chr3g0474991 RchiOBHm_Chr5g0041991 |
| rosa_roxburghii | Rroxscaffold_1G00038590 Rroxscaffold_6G00406650 |
| rosa_rugosa | Rorug03G0146000 Rorug05G0197700 |
| rosa_samantha | Rh5AG282700 Rh5BG288100 Rh5CG319900 Rh5DG297100 |
| rosa_wichuraiana | Rw0G001390 Rw3G017800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 180 |
| AccBSI | CCGCTC | 1 cut(s) | 250 |
| AciI | CCGC | 2 cut(s) | 82, 250 |
| AclI | AACGTT | 1 cut(s) | 198 |
| AcsI | RAATTY | 1 cut(s) | 236 |
| AfaI | GTAC | 1 cut(s) | 266 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 120 |
| AluBI | AGCT | 3 cut(s) | 51, 215, 227 |
| AluI | AGCT | 3 cut(s) | 51, 215, 227 |
| Alw26I | GTCTC | 1 cut(s) | 21 |
| ApeKI | GCWGC | 3 cut(s) | 155, 158, 270 |
| ApoI | RAATTY | 1 cut(s) | 236 |
| AspLEI | GCGC | 1 cut(s) | 181 |
| BbvI | GCAGC | 2 cut(s) | 142, 145 |
| BccI | CCATC | 1 cut(s) | 85 |
| BcoDI | GTCTC | 1 cut(s) | 21 |
| BisI | GCNGC | 4 cut(s) | 156, 159, 251, 271 |
| BlsI | GCNGC | 4 cut(s) | 157, 160, 252, 272 |
| BmsI | GCATC | 1 cut(s) | 190 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 120 |
| Bse3DI | GCAATG | 1 cut(s) | 135 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 120 |
| BseMI | GCAATG | 1 cut(s) | 135 |
| BseXI | GCAGC | 2 cut(s) | 142, 145 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 120 |
| BsmAI | GTCTC | 1 cut(s) | 21 |
| BsmBI | CGTCTC | 1 cut(s) | 21 |
| BspACI | CCGC | 2 cut(s) | 82, 250 |
| BspQI | GCTCTTC | 1 cut(s) | 11 |
| BsrBI | CCGCTC | 1 cut(s) | 250 |
| BsrDI | GCAATG | 1 cut(s) | 135 |
| Bst4CI | ACNGT | 1 cut(s) | 136 |
| Bst6I | CTCTTC | 1 cut(s) | 11 |
| BstHHI | GCGC | 1 cut(s) | 181 |
| BstMAI | GTCTC | 1 cut(s) | 21 |
| BstV1I | GCAGC | 2 cut(s) | 142, 145 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 124 |
| CfoI | GCGC | 1 cut(s) | 181 |
| Csp6I | GTAC | 1 cut(s) | 265 |
| CviJI | RGCY | 4 cut(s) | 51, 215, 227, 253 |
| CviKI_1 | RGCY | 4 cut(s) | 51, 215, 227, 253 |
| CviQI | GTAC | 1 cut(s) | 265 |
| DraI | TTTAAA | 1 cut(s) | 46 |
| Eam1104I | CTCTTC | 1 cut(s) | 11 |
| EarI | CTCTTC | 1 cut(s) | 11 |
| Esp3I | CGTCTC | 1 cut(s) | 21 |
| FaiI | YATR | 2 cut(s) | 70, 192 |
| Fnu4HI | GCNGC | 4 cut(s) | 156, 159, 251, 271 |
| Fsp4HI | GCNGC | 4 cut(s) | 156, 159, 251, 271 |
| FspAI | RTGCGCAY | 1 cut(s) | 180 |
| FspI | TGCGCA | 1 cut(s) | 180 |
| GlaI | GCGC | 1 cut(s) | 180 |
| GluI | GCNGC | 4 cut(s) | 156, 159, 251, 271 |
| HhaI | GCGC | 1 cut(s) | 181 |
| Hin6I | GCGC | 1 cut(s) | 179 |
| HinP1I | GCGC | 1 cut(s) | 179 |
| HincII | GTYRAC | 1 cut(s) | 196 |
| HindII | GTYRAC | 1 cut(s) | 196 |
| Hpy166II | GTNNAC | 1 cut(s) | 196 |
| Hpy188I | TCNGA | 1 cut(s) | 64 |
| Hpy8I | GTNNAC | 1 cut(s) | 196 |
| HpyCH4III | ACNGT | 1 cut(s) | 136 |
| HpyCH4IV | ACGT | 1 cut(s) | 198 |
| HpySE526I | ACGT | 1 cut(s) | 198 |
| HspAI | GCGC | 1 cut(s) | 179 |
| LguI | GCTCTTC | 1 cut(s) | 11 |
| Lsp1109I | GCAGC | 2 cut(s) | 142, 145 |
| LweI | GCATC | 1 cut(s) | 190 |
| MaeII | ACGT | 1 cut(s) | 198 |
| MbiI | CCGCTC | 1 cut(s) | 250 |
| MboII | GAAGA | 2 cut(s) | 97, 100 |
| MluCI | AATT | 2 cut(s) | 76, 236 |
| MmeI | TCCRAC | 1 cut(s) | 44 |
| MnlI | CCTC | 4 cut(s) | 21, 114, 118, 216 |
| MseI | TTAA | 1 cut(s) | 45 |
| NsbI | TGCGCA | 1 cut(s) | 180 |
| PciSI | GCTCTTC | 1 cut(s) | 11 |
| PkrI | GCNGC | 4 cut(s) | 157, 160, 252, 272 |
| Psp1406I | AACGTT | 1 cut(s) | 198 |
| RsaI | GTAC | 1 cut(s) | 266 |
| RsaNI | GTAC | 1 cut(s) | 265 |
| SapI | GCTCTTC | 1 cut(s) | 11 |
| SaqAI | TTAA | 1 cut(s) | 45 |
| SatI | GCNGC | 4 cut(s) | 156, 159, 251, 271 |
| SetI | ASST | 6 cut(s) | 53, 59, 125, 201, 217, 229 |
| SfaNI | GCATC | 1 cut(s) | 190 |
| SgeI | CNNG | 9 cut(s) | 36, 43, 70, 130, 181, 199, 224, 228, 240 |
| Sse9I | AATT | 2 cut(s) | 76, 236 |
| SsiI | CCGC | 2 cut(s) | 82, 250 |
| TaaI | ACNGT | 1 cut(s) | 136 |
| TaiI | ACGT | 1 cut(s) | 201 |
| TaqI | TCGA | 2 cut(s) | 217, 229 |
| TasI | AATT | 2 cut(s) | 76, 236 |
| TauI | GCSGC | 1 cut(s) | 253 |
| Tru1I | TTAA | 1 cut(s) | 45 |
| Tru9I | TTAA | 1 cut(s) | 45 |
| TseI | GCWGC | 3 cut(s) | 155, 158, 270 |
| TspDTI | ATGAA | 1 cut(s) | 249 |
| XapI | RAATTY | 1 cut(s) | 236 |