No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G11591 |
| fragaria_vesca | FvH4_3g23810 |
| malus_domestica | MD03G1190100.v1.1 MD11G1206600.v1.1 MD14G1032500.v1.1 |
| prunus_persica | Prupe.4G229900_v2.0.a1 Prupe.7G100100_v2.0.a1 |
| pyrus_communis | pycom11g17970 |
| rosa_chinensis | RchiOBHm_Chr3g0474991 RchiOBHm_Chr5g0041991 |
| rosa_roxburghii | Rroxscaffold_1G00038590 Rroxscaffold_6G00406650 |
| rosa_rugosa | Rorug03G0146000 Rorug05G0197700 |
| rosa_samantha | Rh5AG282700 Rh5BG288100 Rh5CG319900 Rh5DG297100 |
| rosa_wichuraiana | Rw0G001390 Rw3G017800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 76 |
| AclI | AACGTT | 1 cut(s) | 336 |
| AcsI | RAATTY | 1 cut(s) | 213 |
| AflIII | ACRYGT | 1 cut(s) | 79 |
| AgsI | TTSAA | 1 cut(s) | 119 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 251, 283 |
| AluBI | AGCT | 3 cut(s) | 266, 353, 365 |
| AluI | AGCT | 3 cut(s) | 266, 353, 365 |
| ApeKI | GCWGC | 3 cut(s) | 202, 293, 296 |
| ApoI | RAATTY | 1 cut(s) | 213 |
| AspLEI | GCGC | 1 cut(s) | 343 |
| BbvCI | CCTCAGC | 1 cut(s) | 345 |
| BbvI | GCAGC | 3 cut(s) | 189, 280, 283 |
| BceAI | ACGGC | 1 cut(s) | 328 |
| BisI | GCNGC | 3 cut(s) | 203, 294, 297 |
| BlsI | GCNGC | 3 cut(s) | 204, 295, 298 |
| BmsI | GCATC | 1 cut(s) | 328 |
| Bpu10I | CCTNAGC | 1 cut(s) | 345 |
| BsaAI | YACGTR | 1 cut(s) | 80 |
| Bse3DI | GCAATG | 1 cut(s) | 40 |
| BseGI | GGATG | 1 cut(s) | 75 |
| BseMI | GCAATG | 1 cut(s) | 40 |
| BseMII | CTCAG | 2 cut(s) | 23, 359 |
| BseXI | GCAGC | 3 cut(s) | 189, 280, 283 |
| BspCNI | CTCAG | 2 cut(s) | 24, 358 |
| BspHI | TCATGA | 1 cut(s) | 154 |
| BsrDI | GCAATG | 1 cut(s) | 40 |
| BssNAI | GTATAC | 1 cut(s) | 77 |
| Bst1107I | GTATAC | 1 cut(s) | 77 |
| Bst6I | CTCTTC | 1 cut(s) | 195 |
| BstBAI | YACGTR | 1 cut(s) | 80 |
| BstC8I | GCNNGC | 2 cut(s) | 317, 351 |
| BstDEI | CTNAG | 2 cut(s) | 32, 345 |
| BstF5I | GGATG | 1 cut(s) | 75 |
| BstHHI | GCGC | 1 cut(s) | 343 |
| BstV1I | GCAGC | 3 cut(s) | 189, 280, 283 |
| BstZ17I | GTATAC | 1 cut(s) | 77 |
| BtsCI | GGATG | 1 cut(s) | 75 |
| Cac8I | GCNNGC | 2 cut(s) | 317, 351 |
| CciI | TCATGA | 1 cut(s) | 154 |
| CfoI | GCGC | 1 cut(s) | 343 |
| CseI | GACGC | 1 cut(s) | 160 |
| CviAII | CATG | 1 cut(s) | 155 |
| CviJI | RGCY | 5 cut(s) | 266, 272, 293, 353, 365 |
| CviKI_1 | RGCY | 5 cut(s) | 266, 272, 293, 353, 365 |
| DdeI | CTNAG | 2 cut(s) | 32, 345 |
| Eam1104I | CTCTTC | 1 cut(s) | 195 |
| EarI | CTCTTC | 1 cut(s) | 195 |
| EcoT22I | ATGCAT | 1 cut(s) | 144 |
| FaeI | CATG | 1 cut(s) | 158 |
| FaiI | YATR | 8 cut(s) | 77, 140, 156, 162, 185, 207, 209, 330 |
| FatI | CATG | 1 cut(s) | 154 |
| FblI | GTMKAC | 1 cut(s) | 76 |
| Fnu4HI | GCNGC | 3 cut(s) | 203, 294, 297 |
| FokI | GGATG | 1 cut(s) | 82 |
| Fsp4HI | GCNGC | 3 cut(s) | 203, 294, 297 |
| GlaI | GCGC | 1 cut(s) | 342 |
| GluI | GCNGC | 3 cut(s) | 203, 294, 297 |
| HgaI | GACGC | 1 cut(s) | 160 |
| HhaI | GCGC | 1 cut(s) | 343 |
| Hin1II | CATG | 1 cut(s) | 158 |
| Hin6I | GCGC | 1 cut(s) | 341 |
| HinP1I | GCGC | 1 cut(s) | 341 |
| HincII | GTYRAC | 3 cut(s) | 102, 175, 334 |
| HindII | GTYRAC | 3 cut(s) | 102, 175, 334 |
| HindIII | AAGCTT | 1 cut(s) | 264 |
| HinfI | GANTC | 1 cut(s) | 124 |
| HpaI | GTTAAC | 1 cut(s) | 102 |
| Hpy166II | GTNNAC | 5 cut(s) | 77, 102, 175, 310, 334 |
| Hpy188I | TCNGA | 1 cut(s) | 33 |
| Hpy188III | TCNNGA | 1 cut(s) | 155 |
| Hpy8I | GTNNAC | 5 cut(s) | 77, 102, 175, 310, 334 |
| HpyCH4IV | ACGT | 2 cut(s) | 79, 336 |
| HpyCH4V | TGCA | 4 cut(s) | 45, 142, 205, 319 |
| HpyF3I | CTNAG | 2 cut(s) | 32, 345 |
| HpySE526I | ACGT | 2 cut(s) | 79, 336 |
| Hsp92II | CATG | 1 cut(s) | 158 |
| HspAI | GCGC | 1 cut(s) | 341 |
| KspAI | GTTAAC | 1 cut(s) | 102 |
| LpnPI | CCDG | 1 cut(s) | 28 |
| Lsp1109I | GCAGC | 3 cut(s) | 189, 280, 283 |
| LweI | GCATC | 1 cut(s) | 328 |
| MaeII | ACGT | 2 cut(s) | 79, 336 |
| MboII | GAAGA | 5 cut(s) | 49, 99, 182, 268, 271 |
| MfeI | CAATTG | 1 cut(s) | 119 |
| MluCI | AATT | 3 cut(s) | 93, 119, 213 |
| MnlI | CCTC | 2 cut(s) | 256, 354 |
| Mph1103I | ATGCAT | 1 cut(s) | 144 |
| MseI | TTAA | 1 cut(s) | 101 |
| MunI | CAATTG | 1 cut(s) | 119 |
| NlaIII | CATG | 1 cut(s) | 158 |
| NsiI | ATGCAT | 1 cut(s) | 144 |
| PagI | TCATGA | 1 cut(s) | 154 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 312 |
| PfeI | GAWTC | 1 cut(s) | 124 |
| PkrI | GCNGC | 3 cut(s) | 204, 295, 298 |
| Ppu21I | YACGTR | 1 cut(s) | 80 |
| Psp1406I | AACGTT | 1 cut(s) | 336 |
| SaqAI | TTAA | 1 cut(s) | 101 |
| SatI | GCNGC | 3 cut(s) | 203, 294, 297 |
| SetI | ASST | 5 cut(s) | 82, 268, 339, 355, 367 |
| SfaNI | GCATC | 1 cut(s) | 328 |
| Sse9I | AATT | 3 cut(s) | 93, 119, 213 |
| TaiI | ACGT | 2 cut(s) | 82, 339 |
| TaqI | TCGA | 2 cut(s) | 355, 367 |
| TasI | AATT | 3 cut(s) | 93, 119, 213 |
| TfiI | GAWTC | 1 cut(s) | 124 |
| Tru1I | TTAA | 1 cut(s) | 101 |
| Tru9I | TTAA | 1 cut(s) | 101 |
| TseI | GCWGC | 3 cut(s) | 202, 293, 296 |
| TspDTI | ATGAA | 4 cut(s) | 20, 99, 171, 274 |
| XapI | RAATTY | 1 cut(s) | 213 |
| XmiI | GTMKAC | 1 cut(s) | 76 |
| Zsp2I | ATGCAT | 1 cut(s) | 144 |