MD11G1247100.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
35905476 .. 35911091
5616 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1247100.v1.1.491

Sequence Viewer

Length: 1449 bp
ATGGGTTGCATTTATTGTAAGCCCTCTGCAATTGAGGATAGCAAGGAGAGCCCCAGAGAGAGATTGTCCAACAAGGGGGCATCAGACTCGCGGACGACGAGGGTTGCTTCCTCAAGGAGGGAGGAAACTTATCGGCCGAAAGATCGATATGATGGCAATGGTGGGAGAGCAATGTTGACTGATACGCAAGTGAATGGGCCTGTTCGATCGCAAGGTGAGAATTTTGAAAGGAAAAGGGAAAAGATGGAGTATGTTGTTGCTCAACATCCTGGGATTGGTATCATTCCAAAAGCTGCAGAAGGGGAGCAGGTTGCAGCAGGGTGGCCCTCCTGGCTAGCTGCAGTGGCTGGAGAGGCCATCAAAGGATGGGTACCCCGTCGTGCAGATTCATTTGAGAAGCTAGATAAAATTGGTCAGGGAACTTACAGTAATGTTTATCGGGCCCGTGATCTTGATCAAAAGAAAATTGTTGCTTTGAAGAAAGTGAGGTTTGATAACCTGGAGCCTGAGAGTGTTCGCTTTATGGCAAGGGAAATTCACATTTTACGAAGGCTTGATCATCCAAATGTTATAAAACTAGAAGGTCTAGTTACTTCAAGGATGTCTTGCAGCTTGTACCTTGTGTTTGAGTACATGGAGCATGATTTGGCAGGGCTTGCTTCACACCCTGGTCTGAAGTTTACAGAAGCACAGGTTAAATGTTACATGCAGCAACTGTTATGTGGACTTGATCATTGTCACAGTCGTGGTGTTCTGCATCGTGATATTAAAGGTTCCAACCTTTTAATTGACAACAATGGCATGCTGAAAATCGCAGACTTTGGTCTGGCAAGTTTTTTTGATCCTTGTCAAAATCAACCTTTGACAAGTCGTGTTGTAACTCTATGGTATCGTCCACCTGAGCTTTTGCTTGGTGCTACTTACTATGGGACAGCTGTGGATTTGTGGAGTACAGGTTGCATAGTTGCTGAACTGTATTATGGAAAGCCTATTATGCCTGGAAGAACTGAGGTGGAGCAGTTGCATAAGATTTTCAAGCTTTGTGGCTCACCTTCTGAAGAGTATTGGAGAAAATCAAAGTTGCCTCATGCAACCATATTTAAACCCCAACAACCTTATAGACGTTGTGTGGCAGAAACTTTTAAGGATTTCCCTGCACCAGCTTTAGCACTTATGGAGACCCTTCTTTCTATAGATCCTGCAGATCGTGGATCTGCAGCTTCTGCTCTCAAGAGCGAGTTCTTTACAACAAAACCTCTTCCTTGTGATCCATCAAGTTTGCCAAAGTATCCTCCAAGCAAAGAGTTTGATGCTAAAGTACGGGATGAGGAAGCTAGAAGACAAGGAGCAGCAGGGAAGGGCCAAAGGTTTGACCACGAAAGGAGAGGAACAAGAGAGTCTCGAGCCATACCAGCACCTGATGCCAATGCTGAATTAGTCATTATTTAA

Protein Analysis

483

Amino Acids

54.14

Weight (kDa)

8.94

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 131 - 415 2.3e-67 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 134 - 344 8.9e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 572
Acc36I ACCTGC 1 cut(s) 298
Acc65I GGTACC 1 cut(s) 370
AccB1I GGYRCC 1 cut(s) 370
AccII CGCG 1 cut(s) 91
AciI CCGC 1 cut(s) 91
AclWI GGATC 4 cut(s) 836, 1190, 1219, 1262
AcoI YGGCCR 1 cut(s) 134
AcsI RAATTY 2 cut(s) 220, 534
AcuI CTGAAG 2 cut(s) 695, 1077
AfaI GTAC 5 cut(s) 372, 617, 632, 952, 1320
AfiI CCNNNNNNNGG 3 cut(s) 75, 117, 275
AgsI TTSAA 4 cut(s) 227, 478, 597, 1036
AjnI CCWGG 5 cut(s) 268, 329, 498, 667, 997
AleI CACNNNNGTG 1 cut(s) 744
Alw26I GTCTC 2 cut(s) 1172, 1404
AlwI GGATC 4 cut(s) 836, 1190, 1219, 1262
AlwNI CAGNNNCTG 4 cut(s) 347, 715, 1223, 1418
Ama87I CYCGRG 1 cut(s) 1401
AoxI GGCC 6 cut(s) 134, 197, 323, 354, 441, 1360
ApaI GGGCCC 1 cut(s) 445
ApeKI GCWGC 7 cut(s) 293, 314, 338, 609, 709, 1217, 1349
ApoI RAATTY 2 cut(s) 220, 534
Asp718I GGTACC 1 cut(s) 370
AspS9I GGNCC 5 cut(s) 197, 324, 441, 442, 1360
AsuHPI GGTGA 2 cut(s) 227, 1041
AsuNHI GCTAGC 1 cut(s) 334
AvaI CYCGRG 1 cut(s) 1401
BaeGI GKGCMC 1 cut(s) 445
BaeI ACNNNNGTAYC 2 cut(s) 174, 207
BanI GGYRCC 1 cut(s) 370
BanII GRGCYC 2 cut(s) 53, 445
BbsI GAAGAC 1 cut(s) 1345
BbvI GCAGC 7 cut(s) 280, 325, 326, 621, 721, 1229, 1361
BccI CCATC 5 cut(s) 146, 238, 360, 365, 1279
BcgI CGANNNNNNTGC 2 cut(s) 69, 103
BciT130I CCWGG 5 cut(s) 270, 331, 500, 669, 999
BciVI GTATCC 1 cut(s) 1299
BclI TGATCA 3 cut(s) 454, 556, 730
BcoDI GTCTC 2 cut(s) 1172, 1404
BfaI CTAG 5 cut(s) 335, 401, 578, 587, 1335
BfmI CTRYAG 5 cut(s) 294, 339, 1191, 1200, 1215
BfuAI ACCTGC 1 cut(s) 298
BfuI GTATCC 1 cut(s) 1299
BglI GCCNNNNNGGC 1 cut(s) 331
BisI GCNGC 7 cut(s) 294, 315, 339, 610, 710, 1218, 1350
BlsI GCNGC 7 cut(s) 295, 316, 340, 611, 711, 1219, 1351
Bme1390I CCNGG 5 cut(s) 270, 331, 500, 669, 999
BmeT110I CYCGRG 1 cut(s) 1401
BmgT120I GGNCC 5 cut(s) 197, 324, 441, 442, 1360
BmiI GGNNCC 4 cut(s) 372, 443, 504, 775
BmrFI CCNGG 5 cut(s) 270, 331, 500, 669, 999
BmsI GCATC 4 cut(s) 89, 766, 1300, 1411
BmtI GCTAGC 1 cut(s) 338
BoxI GACNNNNGTC 1 cut(s) 822
BpiI GAAGAC 1 cut(s) 1345
BpmI CTGGAG 2 cut(s) 369, 521
Bpu10I CCTNAGC 1 cut(s) 900
BpuEI CTTGAG 2 cut(s) 97, 1214
Bsa29I ATCGAT 1 cut(s) 145
BsaBI GATNNNNATC 2 cut(s) 278, 453
BsaI GGTCTC 1 cut(s) 1172
BsaJI CCNNGG 2 cut(s) 269, 667
BsaXI ACNNNNNCTCC 2 cut(s) 940, 970
Bsc4I CCNNNNNNNGG 3 cut(s) 75, 117, 275
Bse3DI GCAATG 2 cut(s) 163, 177
Bse8I GATNNNNATC 2 cut(s) 278, 453
BseBI CCWGG 5 cut(s) 270, 331, 500, 669, 999
BseCI ATCGAT 1 cut(s) 145
BseDI CCNNGG 2 cut(s) 269, 667
BseGI GGATG 5 cut(s) 265, 371, 559, 606, 1330
BseJI GATNNNNATC 2 cut(s) 278, 453
BseLI CCNNNNNNNGG 3 cut(s) 75, 117, 275
BseMI GCAATG 2 cut(s) 163, 177
BseMII CTCAG 3 cut(s) 498, 891, 999
BseSI GKGCMC 1 cut(s) 445
BseX3I CGGCCG 1 cut(s) 134
BseXI GCAGC 7 cut(s) 280, 325, 326, 621, 721, 1229, 1361
BsgI GTGCAG 2 cut(s) 402, 1140
Bsh1236I CGCG 1 cut(s) 91
Bsh1285I CGRYCG 2 cut(s) 137, 209
BshFI GGCC 6 cut(s) 136, 199, 325, 356, 443, 1362
BshNI GGYRCC 1 cut(s) 370
BshVI ATCGAT 1 cut(s) 145
BsiEI CGRYCG 2 cut(s) 137, 209
BsiHKCI CYCGRG 1 cut(s) 1401
BslFI GGGAC 1 cut(s) 943
BslI CCNNNNNNNGG 3 cut(s) 75, 117, 275
BsmAI GTCTC 2 cut(s) 1172, 1404
BsmFI GGGAC 1 cut(s) 943
BsnI GGCC 6 cut(s) 136, 199, 325, 356, 443, 1362
Bso31I GGTCTC 1 cut(s) 1172
BsoBI CYCGRG 1 cut(s) 1401
Bsp120I GGGCCC 1 cut(s) 441
Bsp1286I GDGCHC 2 cut(s) 53, 445
BspACI CCGC 1 cut(s) 91
BspANI GGCC 6 cut(s) 136, 199, 325, 356, 443, 1362
BspCNI CTCAG 3 cut(s) 499, 892, 1000
BspDI ATCGAT 1 cut(s) 145
BspFNI CGCG 1 cut(s) 91
BspLI GGNNCC 4 cut(s) 372, 443, 504, 775
BspMAI CTGCAG 4 cut(s) 298, 343, 1204, 1219
BspMI ACCTGC 1 cut(s) 298
BspOI GCTAGC 1 cut(s) 338
BspPI GGATC 4 cut(s) 836, 1190, 1219, 1262
BspT107I GGYRCC 1 cut(s) 370
BspTNI GGTCTC 1 cut(s) 1172
BsrDI GCAATG 2 cut(s) 163, 177
BssECI CCNNGG 2 cut(s) 269, 667
Bst2UI CCWGG 5 cut(s) 270, 331, 500, 669, 999
Bst4CI ACNGT 4 cut(s) 428, 717, 743, 975
Bst6I CTCTTC 2 cut(s) 1053, 1263
BstAPI GCANNNNNTGC 3 cut(s) 656, 1223, 1421
BstC8I GCNNGC 3 cut(s) 336, 657, 803
BstDEI CTNAG 3 cut(s) 507, 900, 1008
BstENI CCTNNNNNAGG 1 cut(s) 115
BstF5I GGATG 5 cut(s) 265, 371, 559, 606, 1330
BstFNI CGCG 1 cut(s) 91
BstMAI GTCTC 2 cut(s) 1172, 1404
BstMCI CGRYCG 2 cut(s) 137, 209
BstMWI GCNNNNNNNGC 9 cut(s) 48, 331, 344, 353, 656, 994, 1223, 1412, 1421
BstNI CCWGG 5 cut(s) 270, 331, 500, 669, 999
BstNSI RCATGY 2 cut(s) 709, 805
BstPAI GACNNNNGTC 1 cut(s) 822
BstSCI CCNGG 5 cut(s) 268, 329, 498, 667, 997
BstSFI CTRYAG 5 cut(s) 294, 339, 1191, 1200, 1215
BstSLI GKGCMC 1 cut(s) 445
BstUI CGCG 1 cut(s) 91
BstV1I GCAGC 7 cut(s) 280, 325, 326, 621, 721, 1229, 1361
BstV2I GAAGAC 1 cut(s) 1345
BstX2I RGATCY 2 cut(s) 1195, 1211
BstYI RGATCY 2 cut(s) 1195, 1211
BstZI CGGCCG 1 cut(s) 134
Bsu15I ATCGAT 1 cut(s) 145
BsuI GTATCC 1 cut(s) 1299
BsuRI GGCC 6 cut(s) 136, 199, 325, 356, 443, 1362
BsuTUI ATCGAT 1 cut(s) 145
BtsCI GGATG 5 cut(s) 265, 371, 559, 606, 1330
BtsI GCAGTG 1 cut(s) 348
BtsIMutI CAGTG 1 cut(s) 348
BveI ACCTGC 1 cut(s) 298
Cac8I GCNNGC 3 cut(s) 336, 657, 803
CaiI CAGNNNCTG 4 cut(s) 347, 715, 1223, 1418
Cfr13I GGNCC 5 cut(s) 197, 324, 441, 442, 1360
ClaI ATCGAT 1 cut(s) 145
Csp6I GTAC 5 cut(s) 371, 616, 631, 951, 1319
CspCI CAANNNNNGTGG 2 cut(s) 1024, 1059
CviAII CATG 5 cut(s) 634, 641, 706, 802, 1088
CviQI GTAC 5 cut(s) 371, 616, 631, 951, 1319
DdeI CTNAG 3 cut(s) 507, 900, 1008
DraI TTTAAA 1 cut(s) 1102
EaeI YGGCCR 1 cut(s) 134
EagI CGGCCG 1 cut(s) 134
Eam1104I CTCTTC 2 cut(s) 1053, 1263
EarI CTCTTC 2 cut(s) 1053, 1263
EclXI CGGCCG 1 cut(s) 134
Eco24I GRGCYC 2 cut(s) 53, 445
Eco31I GGTCTC 1 cut(s) 1172
Eco52I CGGCCG 1 cut(s) 134
Eco57I CTGAAG 2 cut(s) 695, 1077
Eco88I CYCGRG 1 cut(s) 1401
EcoNI CCTNNNNNAGG 1 cut(s) 115
EcoRII CCWGG 5 cut(s) 268, 329, 498, 667, 997
EcoT38I GRGCYC 2 cut(s) 53, 445
FaeI CATG 5 cut(s) 637, 644, 709, 805, 1091
FalI AAGNNNNNCTT 2 cut(s) 589, 621
FaqI GGGAC 1 cut(s) 943
FatI CATG 5 cut(s) 633, 640, 705, 801, 1087
FbaI TGATCA 3 cut(s) 454, 556, 730
Fnu4HI GCNGC 7 cut(s) 294, 315, 339, 610, 710, 1218, 1350
FokI GGATG 5 cut(s) 252, 378, 546, 613, 1337
FriOI GRGCYC 2 cut(s) 53, 445
Fsp4HI GCNGC 7 cut(s) 294, 315, 339, 610, 710, 1218, 1350
FspBI CTAG 5 cut(s) 335, 401, 578, 587, 1335
GluI GCNGC 7 cut(s) 294, 315, 339, 610, 710, 1218, 1350
GsuI CTGGAG 2 cut(s) 369, 521
HaeIII GGCC 6 cut(s) 136, 199, 325, 356, 443, 1362
Hin1II CATG 5 cut(s) 637, 644, 709, 805, 1091
HincII GTYRAC 1 cut(s) 177
HindII GTYRAC 1 cut(s) 177
HindIII AAGCTT 1 cut(s) 1037
HinfI GANTC 3 cut(s) 86, 386, 1397
HphI GGTGA 2 cut(s) 227, 1041
Hpy166II GTNNAC 4 cut(s) 177, 681, 725, 896
Hpy188I TCNGA 3 cut(s) 85, 675, 1057
Hpy188III TCNNGA 4 cut(s) 452, 761, 1231, 1401
Hpy8I GTNNAC 4 cut(s) 177, 681, 725, 896
Hpy99I CGWCG 2 cut(s) 100, 381
HpyAV CCTTC 6 cut(s) 293, 543, 575, 1062, 1193, 1351
HpyCH4III ACNGT 4 cut(s) 428, 717, 743, 975
HpyCH4IV ACGT 1 cut(s) 1123
HpyF10VI GCNNNNNNNGC 9 cut(s) 48, 331, 344, 353, 656, 994, 1223, 1412, 1421
HpyF3I CTNAG 3 cut(s) 507, 900, 1008
HpySE526I ACGT 1 cut(s) 1123
Hsp92II CATG 5 cut(s) 637, 644, 709, 805, 1091
KpnI GGTACC 1 cut(s) 374
Ksp22I TGATCA 3 cut(s) 454, 556, 730
LmnI GCTCC 5 cut(s) 304, 502, 637, 1015, 1346
Lsp1109I GCAGC 7 cut(s) 280, 325, 326, 621, 721, 1229, 1361
LweI GCATC 4 cut(s) 89, 766, 1300, 1411
MaeI CTAG 5 cut(s) 335, 401, 578, 587, 1335
MaeII ACGT 1 cut(s) 1123
MaeIII GTNAC 4 cut(s) 589, 701, 737, 877
MboII GAAGA 5 cut(s) 490, 1014, 1070, 1250, 1350
MfeI CAATTG 1 cut(s) 30
MflI RGATCY 2 cut(s) 1195, 1211
MhlI GDGCHC 2 cut(s) 53, 445
MluCI AATT 7 cut(s) 30, 220, 408, 465, 534, 786, 1433
MlyI GAGTC 2 cut(s) 80, 1406
MmeI TCCRAC 2 cut(s) 93, 801
MseI TTAA 6 cut(s) 696, 768, 785, 1101, 1143, 1447
MslI CAYNNNNRTG 2 cut(s) 564, 744
MspA1I CMGCKG 1 cut(s) 935
MspR9I CCNGG 5 cut(s) 270, 331, 500, 669, 999
MunI CAATTG 1 cut(s) 30
MvaI CCWGG 5 cut(s) 270, 331, 500, 669, 999
MvnI CGCG 1 cut(s) 91
MwoI GCNNNNNNNGC 9 cut(s) 48, 331, 344, 353, 656, 994, 1223, 1412, 1421
NheI GCTAGC 1 cut(s) 334
NlaIII CATG 5 cut(s) 637, 644, 709, 805, 1091
NlaIV GGNNCC 4 cut(s) 372, 443, 504, 775
NmuCI GTSAC 1 cut(s) 737
NspI RCATGY 2 cut(s) 709, 805
OliI CACNNNNGTG 1 cut(s) 744
PaeI GCATGC 1 cut(s) 805
PaeR7I CTCGAG 1 cut(s) 1401
PcsI WCGNNNNNNNCGW 1 cut(s) 95
PfeI GAWTC 1 cut(s) 386
PkrI GCNGC 7 cut(s) 295, 316, 340, 611, 711, 1219, 1351
Ple19I CGATCG 1 cut(s) 209
PleI GAGTC 2 cut(s) 80, 1405
PpsI GAGTC 2 cut(s) 80, 1405
PshAI GACNNNNGTC 1 cut(s) 822
PsiI TTATAA 1 cut(s) 572
Psp6I CCWGG 5 cut(s) 268, 329, 498, 667, 997
PspGI CCWGG 5 cut(s) 268, 329, 498, 667, 997
PspN4I GGNNCC 4 cut(s) 372, 443, 504, 775
PspOMI GGGCCC 1 cut(s) 441
PspPI GGNCC 5 cut(s) 197, 324, 441, 442, 1360
PstI CTGCAG 4 cut(s) 298, 343, 1204, 1219
PstNI CAGNNNCTG 4 cut(s) 347, 715, 1223, 1418
PsuI RGATCY 2 cut(s) 1195, 1211
PvuI CGATCG 1 cut(s) 209
PvuII CAGCTG 1 cut(s) 935
RsaI GTAC 5 cut(s) 372, 617, 632, 952, 1320
RsaNI GTAC 5 cut(s) 371, 616, 631, 951, 1319
RseI CAYNNNNRTG 2 cut(s) 564, 744
SaqAI TTAA 6 cut(s) 696, 768, 785, 1101, 1143, 1447
SatI GCNGC 7 cut(s) 294, 315, 339, 610, 710, 1218, 1350
Sau96I GGNCC 5 cut(s) 197, 324, 441, 442, 1360
SchI GAGTC 2 cut(s) 80, 1406
ScrFI CCNGG 5 cut(s) 270, 331, 500, 669, 999
SduI GDGCHC 2 cut(s) 53, 445
SfaNI GCATC 4 cut(s) 89, 766, 1300, 1411
SfcI CTRYAG 5 cut(s) 294, 339, 1191, 1200, 1215
Sfr274I CTCGAG 1 cut(s) 1401
SlaI CTCGAG 1 cut(s) 1401
SmiMI CAYNNNNRTG 2 cut(s) 564, 744
SmlI CTYRAG 3 cut(s) 112, 1229, 1401
SmoI CTYRAG 3 cut(s) 112, 1229, 1401
SphI GCATGC 1 cut(s) 805
Sse9I AATT 7 cut(s) 30, 220, 408, 465, 534, 786, 1433
SsiI CCGC 1 cut(s) 91
SspMI CTAG 5 cut(s) 335, 401, 578, 587, 1335
StyD4I CCNGG 5 cut(s) 268, 329, 498, 667, 997
TaaI ACNGT 4 cut(s) 428, 717, 743, 975
TaiI ACGT 1 cut(s) 1126
TaqI TCGA 3 cut(s) 145, 205, 1402
TasI AATT 7 cut(s) 30, 220, 408, 465, 534, 786, 1433
TatI WGTACW 2 cut(s) 630, 950
TfiI GAWTC 1 cut(s) 386
Tru1I TTAA 6 cut(s) 696, 768, 785, 1101, 1143, 1447
Tru9I TTAA 6 cut(s) 696, 768, 785, 1101, 1143, 1447
TscAI CASTG 1 cut(s) 348
TseFI GTSAC 1 cut(s) 737
TseI GCWGC 7 cut(s) 293, 314, 338, 609, 709, 1217, 1349
Tsp45I GTSAC 1 cut(s) 737
TspDTI ATGAA 1 cut(s) 378
TspRI CASTG 1 cut(s) 348
XagI CCTNNNNNAGG 1 cut(s) 115
XapI RAATTY 2 cut(s) 220, 534
XceI RCATGY 2 cut(s) 709, 805
XhoI CTCGAG 1 cut(s) 1401
XspI CTAG 5 cut(s) 335, 401, 578, 587, 1335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.