Prupe.4G181100_v2.0.a1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
10738335 .. 10747338
9004 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G181100.1

Sequence Viewer

Length: 2133 bp
ATGGGTTGCATTTATTGCAAGCCCTCTGCTATTGAGGATAGCAAGGACAGCCCCAGAGAGAGATTGTCAAGCAAGGCGGCATCAGACTCGCGGGCAACAAGGGTTGCTTCCTCAAGGAGGGAGGAAGCTTATCGAGCAAAAGATCGATATGATAGTAATGATGGGAGAACAATGTTAATTGATAAGCAATTGAACGGGAATGTTCGATCCCATGGTGAGAATTTCGAGAGGAAGAGGGAGAAGATGGAATATGTTGCTGCTCAACATCCTGGGATGGGTAGCGTTCCGAAAGCTGTAGAAGGGGAGCAGGTTGCCGCAGGGTGGCCAACCTGGCTAGCTGCTGTGGCTGGAGAGGCCATCAAAGGATGGGTACCACGGCGTGCAGATTCATTTGAGAAGCTAGATAAAATTGGTCAGGGAACTTATAGTAATGTTTATAGGGCTCGTGATCTTGATCAAAAGAAAATTGTTGCCTTGAAGAAAGTGAGGTTTGATAACCTGGAGCCTGAGAGTGTCCGCTTTATGGCAAGGGAAATTCACATTTTACGAAGGCTTGATCATCCAAATGTAATAAAGCTAGAAGGTCTAGTTACTTCAAGGATGTCTTGCAGCTTGTATCTTGTTTTCGAGTACATGGAGCATGATTTGGCAGGGCTTGCTTCACACCCTGGTCTGAAGTTTACAGAAGCACAGGTTAAATGTTACATGCAGCAACTATTATGTGGACTTGAACACTGTCACAGTCGTGGTGTTCTGCACCGTGACATTAAAGGTTCCAACCTTTTGATCGACAACAATGGCATGTTGAAAATTGCTGACTTTGGTCTGGCAAGCTTTTTTGATCCCCATCAAAATCAGCCTCTAACAAGCCGTGTTGTAACTCTTTGGTATCGACCACCTGAGCTTTTACTTGGTGCTACTTACTATGGGACTGCTGTGGATTTATGGAGTACAGGCTGCATACTTGCTGAACTGTATTCCGGCAAGCCTATTATGCCTGGAAGAACTGAGGTGGAGCAGTTGCATAAAATTTTCAAGCTTTGTGGCTCACCTTCTGAAGATTATTGGAGGAAATCAAAGTTGCCTCATGCAACCATATTTAAGCCCCAACAGCCTTATAGACGCTGTGTTGCAGAAACTTTTAAGGACTTCCCTGCACCAGCTCTAGCACTTATGGAGATCCTTCTTTCTATAGATCCTGCAGATCGTGGATCTGCAGCTTGTGCTCTCAAGAGCGAGTTCTTTACAACAAAACCTCTTCCTTGTGATCCTTCAAGTTTGCCAAAGTATCCTCCGAGCAAAGAGTTTGATGCTAAAGTACGGGATGAGGAAGCTAGAAGACAAGGAGCAGCAGGGAAGGGCCAAAGGGTTGACCATGAAAGGAGAGGAACAAGAGAGTCTCGAGCCATACCAGCACCTGATGCCAATGCTGAATTAGTCTTGTCAATGCAGAAGGATTTATTTTTACAGAAAAGGCAAGACAATTCTAAGAGCCGGAGTGAGAAGTTTAACCCTCATCCAGAAGAAGTTGCTTCTGGCTTTCCAATTGATCCACCGAGGCCATCACAAGCTGTAGATTTAAGTGTAGAAAATCATGGACATAACCATAAGAGAGCATCCCATTCAGGGCCATTGGCTCACCGTGCTGCATGGGCAAAGTCTACTAAGAACCCAGATGATGCTCCAAAGGTTTCAACTGGAGCTGACTTGTCAACAATGTCAGGTTTAGTGGCAGCAAGGAGGAGTATGTTATCTGAAGAACGCAGAAAAAGGTCTAGTTCTTCACAAATGGAAGGTCCAAAAGTAATAGGCAGGTTTCCAGGTTCGTTCAAGGAAGCCTCAGATCCTTTACCAAAAGATCAAAAGCAGGCCGTCGTAGGTTCTCGTCAAAAAGAAGATGTTAGAAGCAACAAAGATCCAATTATTGTTGGCTATGGATCAAAGGGTCACAAAATGCACTACTCAGGTCCGTTGCTTGTCCCCTCTGGCAACATGGATCAGATGCTGAAGGACCACGATCTCCAGGTCCAAGAAGCTGTTAGGCGAGCACGCCTAGAGAAGGCAAAGGTCAGAAAATTTCAAGCTGAAGGGAACCAAATATCCACCAATTCATTATTTGTTTCTGGTCGTTGA

Protein Analysis

711

Amino Acids

79.35

Weight (kDa)

9.39

Isoelectric Point (pI)

47.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 298, 1803
Acc65I GGTACC 1 cut(s) 370
AccB1I GGYRCC 1 cut(s) 370
AccI GTMKAC 1 cut(s) 1661
AccII CGCG 1 cut(s) 91
AciI CCGC 4 cut(s) 77, 91, 315, 517
AcoI YGGCCR 1 cut(s) 323
AcsI RAATTY 4 cut(s) 220, 534, 1029, 2075
AcuI CTGAAG 5 cut(s) 695, 1077, 1776, 2027, 2106
AdeI CACNNNGTG 1 cut(s) 380
AfaI GTAC 4 cut(s) 372, 632, 952, 1320
AfiI CCNNNNNNNGG 6 cut(s) 117, 275, 321, 523, 1626, 2059
AjnI CCWGG 7 cut(s) 268, 329, 498, 667, 997, 1819, 2022
AleI CACNNNNGTG 1 cut(s) 744
AloI GAACNNNNNNTCC 2 cut(s) 2084, 2116
Alw21I GWGCWC 2 cut(s) 1228, 2050
Alw26I GTCTC 1 cut(s) 1404
AlwNI CAGNNNCTG 2 cut(s) 1418, 2005
Ama87I CYCGRG 1 cut(s) 1401
AoxI GGCC 6 cut(s) 323, 354, 1360, 1559, 1628, 1869
ApeKI GCWGC 9 cut(s) 257, 338, 609, 709, 957, 1217, 1349, 1646, 1733
ApoI RAATTY 4 cut(s) 220, 534, 1029, 2075
ArsI GACNNNNNNTTYG 2 cut(s) 1780, 1812
Asp718I GGTACC 1 cut(s) 370
AspS9I GGNCC 6 cut(s) 1360, 1628, 1796, 1967, 2011, 2026
AsuHPI GGTGA 3 cut(s) 227, 1041, 1631
AsuNHI GCTAGC 1 cut(s) 334
AvaI CYCGRG 1 cut(s) 1401
AvaII GGWCC 4 cut(s) 1796, 1967, 2011, 2026
BalI TGGCCA 1 cut(s) 325
BanI GGYRCC 1 cut(s) 370
BanII GRGCYC 1 cut(s) 445
BauI CACGAG 1 cut(s) 444
BbsI GAAGAC 1 cut(s) 1345
Bbv12I GWGCWC 2 cut(s) 1228, 2050
BbvI GCAGC 9 cut(s) 244, 325, 621, 721, 944, 1229, 1361, 1633, 1745
BccI CCATC 7 cut(s) 155, 238, 268, 360, 365, 855, 1570
BceAI ACGGC 3 cut(s) 392, 855, 1856
BcgI CGANNNNNNTGC 2 cut(s) 69, 103
BciT130I CCWGG 7 cut(s) 270, 331, 500, 669, 999, 1821, 2024
BciVI GTATCC 1 cut(s) 1299
BclI TGATCA 2 cut(s) 454, 556
BcoDI GTCTC 1 cut(s) 1404
BfaI CTAG 8 cut(s) 335, 401, 578, 587, 1166, 1335, 1776, 2054
BfmI CTRYAG 5 cut(s) 294, 1191, 1200, 1215, 1572
BfuAI ACCTGC 2 cut(s) 298, 1803
BfuI GTATCC 1 cut(s) 1299
BglI GCCNNNNNGGC 1 cut(s) 331
Bme1390I CCNGG 7 cut(s) 270, 331, 500, 669, 999, 1821, 2024
Bme18I GGWCC 4 cut(s) 1796, 1967, 2011, 2026
BmeT110I CYCGRG 1 cut(s) 1401
BmgT120I GGNCC 6 cut(s) 1360, 1628, 1796, 1967, 2011, 2026
BmiI GGNNCC 4 cut(s) 372, 504, 775, 2093
BmrFI CCNGG 7 cut(s) 270, 331, 500, 669, 999, 1821, 2024
BmsI GCATC 6 cut(s) 89, 1300, 1411, 1625, 1669, 1992
BmtI GCTAGC 1 cut(s) 338
BoxI GACNNNNGTC 1 cut(s) 822
BpiI GAAGAC 1 cut(s) 1345
BpmI CTGGAG 4 cut(s) 369, 521, 1719, 2006
Bpu10I CCTNAGC 1 cut(s) 900
BpuEI CTTGAG 2 cut(s) 97, 1214
Bsa29I ATCGAT 1 cut(s) 145
BsaBI GATNNNNATC 2 cut(s) 453, 846
BsaJI CCNNGG 5 cut(s) 211, 269, 374, 667, 1556
Bsc4I CCNNNNNNNGG 6 cut(s) 117, 275, 321, 523, 1626, 2059
Bse1I ACTGG 1 cut(s) 1702
Bse8I GATNNNNATC 2 cut(s) 453, 846
BseBI CCWGG 7 cut(s) 270, 331, 500, 669, 999, 1821, 2024
BseCI ATCGAT 1 cut(s) 145
BseDI CCNNGG 5 cut(s) 211, 269, 374, 667, 1556
BseGI GGATG 8 cut(s) 265, 279, 371, 559, 606, 1330, 1516, 1616
BseJI GATNNNNATC 2 cut(s) 453, 846
BseLI CCNNNNNNNGG 6 cut(s) 117, 275, 321, 523, 1626, 2059
BseMII CTCAG 5 cut(s) 498, 891, 999, 1854, 1977
BseNI ACTGG 1 cut(s) 1702
BseRI GAGGAG 1 cut(s) 1756
BseXI GCAGC 9 cut(s) 244, 325, 621, 721, 944, 1229, 1361, 1633, 1745
BsgI GTGCAG 3 cut(s) 402, 740, 1140
Bsh1236I CGCG 1 cut(s) 91
BshFI GGCC 6 cut(s) 325, 356, 1362, 1561, 1630, 1871
BshNI GGYRCC 1 cut(s) 370
BshVI ATCGAT 1 cut(s) 145
BsiHKAI GWGCWC 2 cut(s) 1228, 2050
BsiHKCI CYCGRG 1 cut(s) 1401
BsiSI CCGG 2 cut(s) 981, 1495
BslFI GGGAC 2 cut(s) 943, 1964
BslI CCNNNNNNNGG 6 cut(s) 117, 275, 321, 523, 1626, 2059
BsmAI GTCTC 1 cut(s) 1404
BsmFI GGGAC 2 cut(s) 943, 1964
BsnI GGCC 6 cut(s) 325, 356, 1362, 1561, 1630, 1871
BsoBI CYCGRG 1 cut(s) 1401
Bsp1286I GDGCHC 3 cut(s) 445, 1228, 2050
Bsp19I CCATGG 1 cut(s) 211
BspACI CCGC 4 cut(s) 77, 91, 315, 517
BspANI GGCC 6 cut(s) 325, 356, 1362, 1561, 1630, 1871
BspCNI CTCAG 5 cut(s) 499, 892, 1000, 1853, 1976
BspDI ATCGAT 1 cut(s) 145
BspFNI CGCG 1 cut(s) 91
BspLI GGNNCC 4 cut(s) 372, 504, 775, 2093
BspMAI CTGCAG 2 cut(s) 1204, 1219
BspMI ACCTGC 2 cut(s) 298, 1803
BspOI GCTAGC 1 cut(s) 338
BspT107I GGYRCC 1 cut(s) 370
BsrI ACTGG 1 cut(s) 1702
BssECI CCNNGG 5 cut(s) 211, 269, 374, 667, 1556
BssSI CACGAG 1 cut(s) 444
BssT1I CCWWGG 1 cut(s) 211
Bst2BI CACGAG 1 cut(s) 444
Bst2UI CCWGG 7 cut(s) 270, 331, 500, 669, 999, 1821, 2024
Bst4CI ACNGT 5 cut(s) 737, 743, 761, 975, 1643
Bst6I CTCTTC 2 cut(s) 227, 1263
BstAPI GCANNNNNTGC 4 cut(s) 15, 656, 1223, 1421
BstDEI CTNAG 7 cut(s) 507, 900, 1008, 1488, 1665, 1840, 1963
BstDSI CCRYGG 2 cut(s) 211, 374
BstENI CCTNNNNNAGG 2 cut(s) 115, 2057
BstF5I GGATG 8 cut(s) 265, 279, 371, 559, 606, 1330, 1516, 1616
BstFNI CGCG 1 cut(s) 91
BstMAI GTCTC 1 cut(s) 1404
BstNI CCWGG 7 cut(s) 270, 331, 500, 669, 999, 1821, 2024
BstNSI RCATGY 2 cut(s) 709, 805
BstPAI GACNNNNGTC 1 cut(s) 822
BstSCI CCNGG 7 cut(s) 268, 329, 498, 667, 997, 1819, 2022
BstSFI CTRYAG 5 cut(s) 294, 1191, 1200, 1215, 1572
BstUI CGCG 1 cut(s) 91
BstV1I GCAGC 9 cut(s) 244, 325, 621, 721, 944, 1229, 1361, 1633, 1745
BstV2I GAAGAC 1 cut(s) 1345
BstX2I RGATCY 5 cut(s) 1179, 1195, 1211, 1843, 1915
BstYI RGATCY 5 cut(s) 1179, 1195, 1211, 1843, 1915
Bsu15I ATCGAT 1 cut(s) 145
BsuI GTATCC 1 cut(s) 1299
BsuRI GGCC 6 cut(s) 325, 356, 1362, 1561, 1630, 1871
BsuTUI ATCGAT 1 cut(s) 145
BtgI CCRYGG 2 cut(s) 211, 374
BtsCI GGATG 8 cut(s) 265, 279, 371, 559, 606, 1330, 1516, 1616
BtsIMutI CAGTG 1 cut(s) 733
BveI ACCTGC 2 cut(s) 298, 1803
CaiI CAGNNNCTG 2 cut(s) 1418, 2005
Cfr13I GGNCC 6 cut(s) 1360, 1628, 1796, 1967, 2011, 2026
ClaI ATCGAT 1 cut(s) 145
CseI GACGC 1 cut(s) 1131
Csp6I GTAC 4 cut(s) 371, 631, 951, 1319
CspCI CAANNNNNGTGG 2 cut(s) 1024, 1059
CviQI GTAC 4 cut(s) 371, 631, 951, 1319
DdeI CTNAG 7 cut(s) 507, 900, 1008, 1488, 1665, 1840, 1963
DraIII CACNNNGTG 1 cut(s) 380
EaeI YGGCCR 1 cut(s) 323
Eam1104I CTCTTC 2 cut(s) 227, 1263
EarI CTCTTC 2 cut(s) 227, 1263
Eco130I CCWWGG 1 cut(s) 211
Eco24I GRGCYC 1 cut(s) 445
Eco47I GGWCC 4 cut(s) 1796, 1967, 2011, 2026
Eco57I CTGAAG 5 cut(s) 695, 1077, 1776, 2027, 2106
Eco88I CYCGRG 1 cut(s) 1401
EcoNI CCTNNNNNAGG 2 cut(s) 115, 2057
EcoRII CCWGG 7 cut(s) 268, 329, 498, 667, 997, 1819, 2022
EcoT14I CCWWGG 1 cut(s) 211
EcoT38I GRGCYC 1 cut(s) 445
ErhI CCWWGG 1 cut(s) 211
FalI AAGNNNNNCTT 4 cut(s) 91, 123, 589, 621
FaqI GGGAC 2 cut(s) 943, 1964
FauI CCCGC 1 cut(s) 84
FbaI TGATCA 2 cut(s) 454, 556
FblI GTMKAC 1 cut(s) 1661
FokI GGATG 8 cut(s) 252, 286, 378, 546, 613, 1337, 1503, 1603
FriOI GRGCYC 1 cut(s) 445
FspBI CTAG 8 cut(s) 335, 401, 578, 587, 1166, 1335, 1776, 2054
GsuI CTGGAG 4 cut(s) 369, 521, 1719, 2006
HaeIII GGCC 6 cut(s) 325, 356, 1362, 1561, 1630, 1871
HapII CCGG 2 cut(s) 981, 1495
HgaI GACGC 1 cut(s) 1131
HincII GTYRAC 2 cut(s) 1372, 1713
HindII GTYRAC 2 cut(s) 1372, 1713
HindIII AAGCTT 3 cut(s) 126, 832, 1037
HinfI GANTC 3 cut(s) 86, 386, 1397
HpaII CCGG 2 cut(s) 981, 1495
HphI GGTGA 3 cut(s) 227, 1041, 1631
Hpy166II GTNNAC 5 cut(s) 681, 725, 1372, 1662, 1713
Hpy188I TCNGA 9 cut(s) 85, 288, 675, 1057, 1296, 1756, 1843, 2001, 2072
Hpy188III TCNNGA 6 cut(s) 226, 446, 452, 1231, 1401, 1520
Hpy8I GTNNAC 5 cut(s) 681, 725, 1372, 1662, 1713
Hpy99I CGWCG 1 cut(s) 1877
HpyCH4III ACNGT 5 cut(s) 737, 743, 761, 975, 1643
HpyF3I CTNAG 7 cut(s) 507, 900, 1008, 1488, 1665, 1840, 1963
KpnI GGTACC 1 cut(s) 374
Ksp22I TGATCA 2 cut(s) 454, 556
LmnI GCTCC 7 cut(s) 304, 502, 637, 1015, 1346, 1687, 1700
Lsp1109I GCAGC 9 cut(s) 244, 325, 621, 721, 944, 1229, 1361, 1633, 1745
LweI GCATC 6 cut(s) 89, 1300, 1411, 1625, 1669, 1992
MaeI CTAG 8 cut(s) 335, 401, 578, 587, 1166, 1335, 1776, 2054
MaeIII GTNAC 6 cut(s) 589, 701, 737, 761, 877, 1946
MfeI CAATTG 2 cut(s) 188, 1545
MflI RGATCY 5 cut(s) 1179, 1195, 1211, 1843, 1915
MhlI GDGCHC 3 cut(s) 445, 1228, 2050
MlsI TGGCCA 1 cut(s) 325
MluNI TGGCCA 1 cut(s) 325
MlyI GAGTC 2 cut(s) 80, 1406
MmeI TCCRAC 1 cut(s) 801
Mox20I TGGCCA 1 cut(s) 325
MscI TGGCCA 1 cut(s) 325
MseI TTAA 7 cut(s) 176, 696, 768, 1101, 1143, 1509, 1580
MslI CAYNNNNRTG 2 cut(s) 564, 744
Msp20I TGGCCA 1 cut(s) 325
MspI CCGG 2 cut(s) 981, 1495
MspR9I CCNGG 7 cut(s) 270, 331, 500, 669, 999, 1821, 2024
MunI CAATTG 2 cut(s) 188, 1545
MvaI CCWGG 7 cut(s) 270, 331, 500, 669, 999, 1821, 2024
MvnI CGCG 1 cut(s) 91
NcoI CCATGG 1 cut(s) 211
NheI GCTAGC 1 cut(s) 334
NlaIV GGNNCC 4 cut(s) 372, 504, 775, 2093
NmuCI GTSAC 3 cut(s) 737, 761, 1946
NspI RCATGY 2 cut(s) 709, 805
OliI CACNNNNGTG 1 cut(s) 744
PaeR7I CTCGAG 1 cut(s) 1401
PfeI GAWTC 1 cut(s) 386
PleI GAGTC 2 cut(s) 80, 1405
PpsI GAGTC 2 cut(s) 80, 1405
PshAI GACNNNNGTC 1 cut(s) 822
Psp6I CCWGG 7 cut(s) 268, 329, 498, 667, 997, 1819, 2022
PspGI CCWGG 7 cut(s) 268, 329, 498, 667, 997, 1819, 2022
PspN4I GGNNCC 4 cut(s) 372, 504, 775, 2093
PspPI GGNCC 6 cut(s) 1360, 1628, 1796, 1967, 2011, 2026
PstI CTGCAG 2 cut(s) 1204, 1219
PstNI CAGNNNCTG 2 cut(s) 1418, 2005
PsuI RGATCY 5 cut(s) 1179, 1195, 1211, 1843, 1915
RsaI GTAC 4 cut(s) 372, 632, 952, 1320
RsaNI GTAC 4 cut(s) 371, 631, 951, 1319
RseI CAYNNNNRTG 2 cut(s) 564, 744
SaqAI TTAA 7 cut(s) 176, 696, 768, 1101, 1143, 1509, 1580
Sau96I GGNCC 6 cut(s) 1360, 1628, 1796, 1967, 2011, 2026
SchI GAGTC 2 cut(s) 80, 1406
ScrFI CCNGG 7 cut(s) 270, 331, 500, 669, 999, 1821, 2024
SduI GDGCHC 3 cut(s) 445, 1228, 2050
SfaNI GCATC 6 cut(s) 89, 1300, 1411, 1625, 1669, 1992
SfcI CTRYAG 5 cut(s) 294, 1191, 1200, 1215, 1572
Sfr274I CTCGAG 1 cut(s) 1401
SinI GGWCC 4 cut(s) 1796, 1967, 2011, 2026
SlaI CTCGAG 1 cut(s) 1401
SmiMI CAYNNNNRTG 2 cut(s) 564, 744
SmlI CTYRAG 3 cut(s) 112, 1229, 1401
SmoI CTYRAG 3 cut(s) 112, 1229, 1401
SsiI CCGC 4 cut(s) 77, 91, 315, 517
SspMI CTAG 8 cut(s) 335, 401, 578, 587, 1166, 1335, 1776, 2054
StyD4I CCNGG 7 cut(s) 268, 329, 498, 667, 997, 1819, 2022
StyI CCWWGG 1 cut(s) 211
TaaI ACNGT 5 cut(s) 737, 743, 761, 975, 1643
TaqI TCGA 8 cut(s) 133, 145, 205, 225, 627, 789, 892, 1402
TatI WGTACW 2 cut(s) 630, 950
TauI GCSGC 2 cut(s) 80, 317
TfiI GAWTC 1 cut(s) 386
Tru1I TTAA 7 cut(s) 176, 696, 768, 1101, 1143, 1509, 1580
Tru9I TTAA 7 cut(s) 176, 696, 768, 1101, 1143, 1509, 1580
TscAI CASTG 1 cut(s) 740
TseFI GTSAC 3 cut(s) 737, 761, 1946
TseI GCWGC 9 cut(s) 257, 338, 609, 709, 957, 1217, 1349, 1646, 1733
Tsp45I GTSAC 3 cut(s) 737, 761, 1946
TspDTI ATGAA 3 cut(s) 378, 1392, 2100
TspGWI ACGGA 1 cut(s) 1959
TspRI CASTG 1 cut(s) 740
VpaK11BI GGWCC 4 cut(s) 1796, 1967, 2011, 2026
XagI CCTNNNNNAGG 2 cut(s) 115, 2057
XapI RAATTY 4 cut(s) 220, 534, 1029, 2075
XceI RCATGY 2 cut(s) 709, 805
XhoI CTCGAG 1 cut(s) 1401
XmiI GTMKAC 1 cut(s) 1661
XspI CTAG 8 cut(s) 335, 401, 578, 587, 1166, 1335, 1776, 2054
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.