MD12G1074700.v1.1

Serine arginine repetitive matrix protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0012049
Physical Location & Seq
Reverse (-)
9011676 .. 9014482
2807 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1074700.v1.1.491

Sequence Viewer

Length: 1923 bp
ATGGGTACTTGTTTTAGCAAGAAGAACACCTCTTGTTCCCCTGCTCCGCTGCCTCTTCCTCTATCTGCTCCGCCTGCTACCGGTTATGGTTACGGTTATGGGGTGGTTGATTCAAGCATCAAGAGCAAGCCCATATCGGAAACTGAAGCAGGGGAGCTTAAAACGAAGGTGAAGAAGCAGCCAGGAGCAAAACAAGAACAAATTGCCCAACAAGAAGGAGACAATCAAGATCAAGAACCCCAAGTCCAAGTGAAGAAGGAGGTATTCGTCATCAAACACCGAAAGAGCCACGACGAAAGAGGGGACAGAGATTGCAAGAAAACCCCACTTCCCCAAAACCAAATCCAACCGAATTCGCCGCGACAACCGCCGTCTGATGCGGCGGTTGTTTTTGCTGCTGCAGCTGCTTCTCCTCCGCAGATTGCTGCTGACACCAAGACCGGTGCTTGCAGTGTATCCGCGGATGACGTTGACAAGGTTGGGAAGCGTGGGAGGACGTTGAGCTGCAACAAGGAGGAATTGGACGCCATTCTCATACAGTGTGGAAGGCTCAGCCGCAGCAATTCTTCCGGGTCTGCGAATAGAACCCGAAAGTACTCTGGTTCGAAGAGGAGATTTGATTTCGATGCGAGCGATGTTCATGCCAATGTCAATGATATATGTAATGGTGCTGATGCTGATGGTGAGGGTGATAGGGTTTCAGAAGAGAAAACTCACCGCCATTCTTTGAGGTCAAGGCCTTCTTCTCCTTCTTCTCAAGGGAGGAGGAGGAGGACACCCAGCAGAGAAAGAAATCAGCAGCAGCGATCGAGCAGCAGGGAGAGACGAACTAGTCTTTCACCGGGCAAACGCTCATCTTCTAATGCTAATTCTGGTGCAACAGCAACTGCCAATGCGAATCCTAGGCCAGGAAAGATGGTTTCAGTCCCTGCAGCTGCCATTAACAATGGGGAATCTGCAACTACCATCAAGCGAATTTCAGTGAAGAGAAATGTTGGATCCCCCCGTGCTCAGTCCCCAGCTAGAGCTCAGTCTCCAGCTATATTGAATGGTAGAGGTCCCAATGACGGTCAGCAGCAGCCTTCTCTAAGCCGGAGCTCCTCAAGAAAAGCGGAGCACTCCCCCTACAGAAGGAACCCATTGGCTGAGATCGATCCTAACTCCCTTGCCTACCCACAAGCGAATAACAACAACCGAAACAAAAGAGAAATCCAGGCTGAAGAGGAGATTGTTGTCAAGGAACCCACCAATTTTTCAAATCAGAAACCGACTCTCGAAATCAACTGTAACAGAATTGTCGCCCAAGGTATCAACTACATAACCAGCAATAGTACAATGGACAACAAGAACAAGGTTCTAGTGGAGGAGGCCAAGGGACAACCACAAGGGAAACCCCAAACATTAACAAGAAGCAGGTCCTCTAGGCGATCCAGAGACCTAGACATTGATCCTGAAACCAACAACCTTTTGAATCCTGGGCACATAGGCTGTCTAGCAGATGAGCGAAAAGATCCTTTTGTGGAGTCTGAGGTAGTTGCCAATGATGATCTGATGGAGCCAAGCTTCCATAAGTATGTGACTGTGAGAAGGGGTACTGGTGCATTGGAAGATATGGAGGACCAAGAGTCTTCTGGCAGCAACAGCTTTCTCAGTGGTAGTTCTCACCCGCAACAACATAATTGGGGCTTCTCTTCTTCTTCGTGGGAACCCAATTCAGCTGACTCCACTGATTGCTGGACTTCAAGATCCAACACCAAAGAGGAGGATCACAAAACTCCACTGAGTATTGGTATGGATGAGGCTGCAAGAAGGAGATTGGATAGGCACCATTGCAGCGGTGGAATTGGGCGTGGAAGTCTCGCTGCCATCAAAACCAAAGGGCTTCCCACACTTCCAGGTGTTGCAGCTGCAGCATCAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

641

Amino Acids

69.44

Weight (kDa)

9.46

Isoelectric Point (pI)

65.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012049)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65710 AT5G37010
fragaria_vesca FvH4_5g39710
malus_domestica MD12G1074700.v1.1 MD14G1072800.v1.1
prunus_persica Prupe.7G058700_v2.0.a1 Prupe.7G058800_v2.0.a1
pyrus_communis pycom12g06450 pycom14g06270
rosa_chinensis RchiOBHm_Chr7g0242011
rosa_laevigata RLG00000000517
rosa_multiflora Rmu_sc0003559.1_g000015
rosa_roxburghii Rroxscaffold_3G00218280
rosa_rugosa Rorug07G0349800
rosa_samantha Rh7AG504500 Rh7BG476300 Rh7CG521000 Rh7DG490100
rosa_wichuraiana Rw7G042640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 831
Acc36I ACCTGC 1 cut(s) 1404
AccB1I GGYRCC 1 cut(s) 1824
AccII CGCG 2 cut(s) 361, 461
AclWI GGATC 8 cut(s) 993, 1006, 1148, 1422, 1442, 1505, 1740, 1773
AcsI RAATTY 2 cut(s) 352, 975
AcuI CTGAAG 2 cut(s) 165, 1239
AcyI GRCGYC 1 cut(s) 525
AfaI GTAC 4 cut(s) 7, 596, 1333, 1594
AfiI CCNNNNNNNGG 4 cut(s) 80, 908, 1067, 1131
AgeI ACCGGT 2 cut(s) 80, 440
AgsI TTSAA 5 cut(s) 114, 1048, 1257, 1471, 1743
AhdI GACNNNNNGTC 1 cut(s) 1624
AhlI ACTAGT 1 cut(s) 830
AjnI CCWGG 5 cut(s) 181, 907, 1212, 1474, 1894
AloI GAACNNNNNNTCC 2 cut(s) 228, 260
Alw21I GWGCWC 4 cut(s) 1012, 1030, 1100, 1119
Alw26I GTCTC 5 cut(s) 213, 817, 1038, 1428, 1862
AlwI GGATC 8 cut(s) 993, 1006, 1148, 1422, 1442, 1505, 1740, 1773
AlwNI CAGNNNCTG 2 cut(s) 887, 929
AoxI GGCC 3 cut(s) 737, 905, 1368
ApoI RAATTY 2 cut(s) 352, 975
AsiGI ACCGGT 2 cut(s) 80, 440
AspA2I CCTAGG 1 cut(s) 902
AspS9I GGNCC 3 cut(s) 1058, 1416, 1618
AsuC2I CCSGG 2 cut(s) 571, 843
AsuHPI GGTGA 6 cut(s) 181, 695, 701, 707, 831, 1655
AsuII TTCGAA 1 cut(s) 605
AvaII GGWCC 3 cut(s) 1058, 1416, 1618
AvrII CCTAGG 1 cut(s) 902
BaeGI GKGCMC 1 cut(s) 1482
BamHI GGATCC 1 cut(s) 998
BanI GGYRCC 1 cut(s) 1824
BanII GRGCYC 2 cut(s) 1030, 1100
BbsI GAAGAC 1 cut(s) 1620
Bbv12I GWGCWC 4 cut(s) 1012, 1030, 1100, 1119
BccI CCATC 5 cut(s) 674, 910, 974, 1546, 1874
BceAI ACGGC 1 cut(s) 355
BcgI CGANNNNNNTGC 2 cut(s) 623, 657
BciT130I CCWGG 5 cut(s) 183, 909, 1214, 1476, 1896
BciVI GTATCC 1 cut(s) 466
BcnI CCSGG 2 cut(s) 571, 843
BcoDI GTCTC 5 cut(s) 213, 817, 1038, 1428, 1862
BcuI ACTAGT 1 cut(s) 830
BfaI CTAG 7 cut(s) 831, 903, 1023, 1358, 1422, 1439, 1493
BfmI CTRYAG 4 cut(s) 399, 930, 1126, 1908
BfuAI ACCTGC 1 cut(s) 1404
BfuI GTATCC 1 cut(s) 466
BlnI CCTAGG 1 cut(s) 902
BlpI GCTNAGC 1 cut(s) 551
BmcAI AGTACT 1 cut(s) 596
Bme1390I CCNGG 7 cut(s) 183, 571, 843, 909, 1214, 1476, 1896
Bme18I GGWCC 3 cut(s) 1058, 1416, 1618
BmeRI GACNNNNNGTC 1 cut(s) 1624
BmgT120I GGNCC 3 cut(s) 1058, 1416, 1618
BmiI GGNNCC 7 cut(s) 1000, 1060, 1136, 1242, 1557, 1707, 1826
BmrFI CCNGG 7 cut(s) 183, 571, 843, 909, 1214, 1476, 1896
BmsI GCATC 4 cut(s) 126, 367, 616, 664
BpiI GAAGAC 1 cut(s) 1620
BpmI CTGGAG 1 cut(s) 1020
Bpu1102I GCTNAGC 1 cut(s) 551
Bpu14I TTCGAA 1 cut(s) 605
BpuEI CTTGAG 2 cut(s) 741, 1087
BpuMI CCSGG 2 cut(s) 571, 843
Bsa29I ATCGAT 1 cut(s) 1152
BsaHI GRCGYC 1 cut(s) 525
BsaI GGTCTC 1 cut(s) 1428
BsaJI CCNNGG 5 cut(s) 459, 902, 1303, 1371, 1475
BsaWI WCCGGW 2 cut(s) 80, 440
Bsc4I CCNNNNNNNGG 4 cut(s) 80, 908, 1067, 1131
Bse118I RCCGGY 2 cut(s) 80, 440
Bse1I ACTGG 1 cut(s) 1600
Bse3DI GCAATG 1 cut(s) 1828
BseBI CCWGG 5 cut(s) 183, 909, 1214, 1476, 1896
BseCI ATCGAT 1 cut(s) 1152
BseDI CCNNGG 5 cut(s) 459, 902, 1303, 1371, 1475
BseGI GGATG 2 cut(s) 469, 1801
BseLI CCNNNNNNNGG 4 cut(s) 80, 908, 1067, 1131
BseMI GCAATG 1 cut(s) 1828
BseMII CTCAG 7 cut(s) 565, 1025, 1043, 1137, 1518, 1663, 1772
BseNI ACTGG 1 cut(s) 1600
BseRI GAGGAG 9 cut(s) 402, 625, 778, 781, 784, 1090, 1238, 1379, 1775
BseSI GKGCMC 1 cut(s) 1482
BseYI CCCAGC 2 cut(s) 779, 1018
Bsh1236I CGCG 2 cut(s) 361, 461
Bsh1285I CGRYCG 1 cut(s) 809
BshFI GGCC 3 cut(s) 739, 907, 1370
BshNI GGYRCC 1 cut(s) 1824
BshTI ACCGGT 2 cut(s) 80, 440
BshVI ATCGAT 1 cut(s) 1152
BsiEI CGRYCG 1 cut(s) 809
BsiHKAI GWGCWC 4 cut(s) 1012, 1030, 1100, 1119
BsiSI CCGG 5 cut(s) 81, 441, 570, 842, 1093
BslFI GGGAC 5 cut(s) 317, 911, 1000, 1044, 1389
BslI CCNNNNNNNGG 4 cut(s) 80, 908, 1067, 1131
BsmAI GTCTC 5 cut(s) 213, 817, 1038, 1428, 1862
BsmBI CGTCTC 1 cut(s) 817
BsmFI GGGAC 5 cut(s) 317, 911, 1000, 1044, 1389
BsnI GGCC 3 cut(s) 739, 907, 1370
Bso31I GGTCTC 1 cut(s) 1428
Bsp119I TTCGAA 1 cut(s) 605
Bsp1286I GDGCHC 5 cut(s) 1012, 1030, 1100, 1119, 1482
Bsp1720I GCTNAGC 1 cut(s) 551
BspANI GGCC 3 cut(s) 739, 907, 1370
BspCNI CTCAG 7 cut(s) 564, 1024, 1042, 1138, 1519, 1662, 1773
BspDI ATCGAT 1 cut(s) 1152
BspFNI CGCG 2 cut(s) 361, 461
BspLI GGNNCC 7 cut(s) 1000, 1060, 1136, 1242, 1557, 1707, 1826
BspMAI CTGCAG 3 cut(s) 403, 934, 1912
BspMI ACCTGC 1 cut(s) 1404
BspPI GGATC 8 cut(s) 993, 1006, 1148, 1422, 1442, 1505, 1740, 1773
BspT104I TTCGAA 1 cut(s) 605
BspT107I GGYRCC 1 cut(s) 1824
BspTNI GGTCTC 1 cut(s) 1428
BsrDI GCAATG 1 cut(s) 1828
BsrFI RCCGGY 2 cut(s) 80, 440
BsrI ACTGG 1 cut(s) 1600
BssAI RCCGGY 2 cut(s) 80, 440
BssECI CCNNGG 5 cut(s) 459, 902, 1303, 1371, 1475
BssNI GRCGYC 1 cut(s) 525
BssT1I CCWWGG 3 cut(s) 902, 1303, 1371
Bst2UI CCWGG 5 cut(s) 183, 909, 1214, 1476, 1896
Bst4CI ACNGT 5 cut(s) 95, 540, 1070, 1286, 1582
Bst6I CTCTTC 6 cut(s) 60, 602, 699, 980, 1215, 1696
BstACI GRCGYC 1 cut(s) 525
BstBI TTCGAA 1 cut(s) 605
BstC8I GCNNGC 4 cut(s) 75, 128, 448, 631
BstDEI CTNAG 8 cut(s) 551, 1011, 1029, 1088, 1146, 1527, 1649, 1781
BstDSI CCRYGG 1 cut(s) 459
BstENI CCTNNNNNAGG 2 cut(s) 906, 1129
BstF5I GGATG 2 cut(s) 469, 1801
BstFNI CGCG 2 cut(s) 361, 461
BstMAI GTCTC 5 cut(s) 213, 817, 1038, 1428, 1862
BstMCI CGRYCG 1 cut(s) 809
BstMWI GCNNNNNNNGC 7 cut(s) 74, 123, 367, 401, 404, 1641, 1910
BstNI CCWGG 5 cut(s) 183, 909, 1214, 1476, 1896
BstSCI CCNGG 7 cut(s) 181, 569, 841, 907, 1212, 1474, 1894
BstSFI CTRYAG 4 cut(s) 399, 930, 1126, 1908
BstSLI GKGCMC 1 cut(s) 1482
BstUI CGCG 2 cut(s) 361, 461
BstV2I GAAGAC 1 cut(s) 1620
BstX2I RGATCY 3 cut(s) 998, 1510, 1745
BstYI RGATCY 3 cut(s) 998, 1510, 1745
Bsu15I ATCGAT 1 cut(s) 1152
BsuI GTATCC 1 cut(s) 466
BsuRI GGCC 3 cut(s) 739, 907, 1370
BsuTUI ATCGAT 1 cut(s) 1152
BtgI CCRYGG 1 cut(s) 459
BtgZI GCGATG 1 cut(s) 648
BtsCI GGATG 2 cut(s) 469, 1801
BtsI GCAGTG 1 cut(s) 457
BtsIMutI CAGTG 6 cut(s) 457, 545, 987, 1657, 1725, 1778
BveI ACCTGC 1 cut(s) 1404
Cac8I GCNNGC 4 cut(s) 75, 128, 448, 631
CaiI CAGNNNCTG 2 cut(s) 887, 929
Cfr10I RCCGGY 2 cut(s) 80, 440
Cfr13I GGNCC 3 cut(s) 1058, 1416, 1618
Cfr42I CCGCGG 1 cut(s) 462
ClaI ATCGAT 1 cut(s) 1152
CseI GACGC 1 cut(s) 533
Csp6I GTAC 4 cut(s) 6, 595, 1332, 1593
CspAI ACCGGT 2 cut(s) 80, 440
CviAII CATG 1 cut(s) 641
CviQI GTAC 4 cut(s) 6, 595, 1332, 1593
DdeI CTNAG 8 cut(s) 551, 1011, 1029, 1088, 1146, 1527, 1649, 1781
DrdI GACNNNNNNGTC 1 cut(s) 831
DriI GACNNNNNGTC 1 cut(s) 1624
DseDI GACNNNNNNGTC 1 cut(s) 831
Eam1104I CTCTTC 6 cut(s) 60, 602, 699, 980, 1215, 1696
Eam1105I GACNNNNNGTC 1 cut(s) 1624
EarI CTCTTC 6 cut(s) 60, 602, 699, 980, 1215, 1696
EciI GGCGGA 1 cut(s) 60
Ecl136II GAGCTC 2 cut(s) 1028, 1098
Eco130I CCWWGG 3 cut(s) 902, 1303, 1371
Eco147I AGGCCT 1 cut(s) 739
Eco24I GRGCYC 2 cut(s) 1030, 1100
Eco31I GGTCTC 1 cut(s) 1428
Eco47I GGWCC 3 cut(s) 1058, 1416, 1618
Eco53kI GAGCTC 2 cut(s) 1028, 1098
Eco57I CTGAAG 2 cut(s) 165, 1239
EcoICRI GAGCTC 2 cut(s) 1028, 1098
EcoNI CCTNNNNNAGG 2 cut(s) 906, 1129
EcoO109I RGGNCCY 2 cut(s) 1058, 1416
EcoRI GAATTC 1 cut(s) 352
EcoRII CCWGG 5 cut(s) 181, 907, 1212, 1474, 1894
EcoT14I CCWWGG 3 cut(s) 902, 1303, 1371
EcoT38I GRGCYC 2 cut(s) 1030, 1100
ErhI CCWWGG 3 cut(s) 902, 1303, 1371
Esp3I CGTCTC 1 cut(s) 817
FaeI CATG 1 cut(s) 644
FalI AAGNNNNNCTT 2 cut(s) 727, 759
FaqI GGGAC 5 cut(s) 317, 911, 1000, 1044, 1389
FatI CATG 1 cut(s) 640
FauI CCCGC 1 cut(s) 1674
FokI GGATG 2 cut(s) 476, 1808
FriOI GRGCYC 2 cut(s) 1030, 1100
FspBI CTAG 7 cut(s) 831, 903, 1023, 1358, 1422, 1439, 1493
GsaI CCCAGC 2 cut(s) 783, 1022
GsuI CTGGAG 1 cut(s) 1020
HaeIII GGCC 3 cut(s) 739, 907, 1370
HapII CCGG 5 cut(s) 81, 441, 570, 842, 1093
HgaI GACGC 1 cut(s) 533
Hin1I GRCGYC 1 cut(s) 525
Hin1II CATG 1 cut(s) 644
HincII GTYRAC 1 cut(s) 472
HindII GTYRAC 1 cut(s) 472
HindIII AAGCTT 1 cut(s) 1561
HinfI GANTC 8 cut(s) 110, 898, 953, 1270, 1471, 1523, 1625, 1721
HpaII CCGG 5 cut(s) 81, 441, 570, 842, 1093
HphI GGTGA 6 cut(s) 181, 695, 701, 707, 831, 1655
Hpy166II GTNNAC 1 cut(s) 472
Hpy188I TCNGA 6 cut(s) 139, 376, 703, 1263, 1528, 1551
Hpy188III TCNNGA 8 cut(s) 121, 227, 233, 1104, 1274, 1431, 1451, 1743
Hpy8I GTNNAC 1 cut(s) 472
Hpy99I CGWCG 1 cut(s) 296
HpyCH4III ACNGT 5 cut(s) 95, 540, 1070, 1286, 1582
HpyCH4IV ACGT 2 cut(s) 468, 497
HpyF10VI GCNNNNNNNGC 7 cut(s) 74, 123, 367, 401, 404, 1641, 1910
HpyF3I CTNAG 8 cut(s) 551, 1011, 1029, 1088, 1146, 1527, 1649, 1781
HpySE526I ACGT 2 cut(s) 468, 497
Hsp92I GRCGYC 1 cut(s) 525
Hsp92II CATG 1 cut(s) 644
KspI CCGCGG 1 cut(s) 462
LmnI GCTCC 8 cut(s) 49, 73, 154, 185, 1095, 1103, 1114, 1555
LweI GCATC 4 cut(s) 126, 367, 616, 664
MaeI CTAG 7 cut(s) 831, 903, 1023, 1358, 1422, 1439, 1493
MaeII ACGT 2 cut(s) 468, 497
MaeIII GTNAC 3 cut(s) 89, 1286, 1576
MflI RGATCY 3 cut(s) 998, 1510, 1745
MhlI GDGCHC 5 cut(s) 1012, 1030, 1100, 1119, 1482
MlyI GAGTC 4 cut(s) 1264, 1532, 1634, 1715
MmeI TCCRAC 3 cut(s) 370, 976, 1773
MseI TTAA 3 cut(s) 159, 942, 1403
MslI CAYNNNNRTG 2 cut(s) 645, 1572
MspA1I CMGCKG 7 cut(s) 49, 404, 461, 935, 1718, 1836, 1907
MspI CCGG 5 cut(s) 81, 441, 570, 842, 1093
MspR9I CCNGG 7 cut(s) 183, 571, 843, 909, 1214, 1476, 1896
MvaI CCWGG 5 cut(s) 183, 909, 1214, 1476, 1896
MvnI CGCG 2 cut(s) 361, 461
MwoI GCNNNNNNNGC 7 cut(s) 74, 123, 367, 401, 404, 1641, 1910
NciI CCSGG 2 cut(s) 571, 843
NlaIII CATG 1 cut(s) 644
NlaIV GGNNCC 7 cut(s) 1000, 1060, 1136, 1242, 1557, 1707, 1826
NmuCI GTSAC 1 cut(s) 1576
NspV TTCGAA 1 cut(s) 605
PceI AGGCCT 1 cut(s) 739
PcsI WCGNNNNNNNCGW 1 cut(s) 630
PfeI GAWTC 4 cut(s) 110, 898, 953, 1471
PinAI ACCGGT 2 cut(s) 80, 440
Ple19I CGATCG 1 cut(s) 809
PleI GAGTC 4 cut(s) 1264, 1531, 1633, 1715
PpsI GAGTC 4 cut(s) 1264, 1531, 1633, 1715
PpuMI RGGWCCY 2 cut(s) 1058, 1416
Psp124BI GAGCTC 2 cut(s) 1030, 1100
Psp5II RGGWCCY 2 cut(s) 1058, 1416
Psp6I CCWGG 5 cut(s) 181, 907, 1212, 1474, 1894
PspFI CCCAGC 2 cut(s) 779, 1018
PspGI CCWGG 5 cut(s) 181, 907, 1212, 1474, 1894
PspN4I GGNNCC 7 cut(s) 1000, 1060, 1136, 1242, 1557, 1707, 1826
PspPI GGNCC 3 cut(s) 1058, 1416, 1618
PspPPI RGGWCCY 2 cut(s) 1058, 1416
PstI CTGCAG 3 cut(s) 403, 934, 1912
PstNI CAGNNNCTG 2 cut(s) 887, 929
PsuI RGATCY 3 cut(s) 998, 1510, 1745
PvuI CGATCG 1 cut(s) 809
PvuII CAGCTG 4 cut(s) 404, 935, 1718, 1907
RsaI GTAC 4 cut(s) 7, 596, 1333, 1594
RsaNI GTAC 4 cut(s) 6, 595, 1332, 1593
RseI CAYNNNNRTG 2 cut(s) 645, 1572
SacI GAGCTC 2 cut(s) 1030, 1100
SacII CCGCGG 1 cut(s) 462
SaqAI TTAA 3 cut(s) 159, 942, 1403
Sau96I GGNCC 3 cut(s) 1058, 1416, 1618
ScaI AGTACT 1 cut(s) 596
SchI GAGTC 4 cut(s) 1264, 1532, 1634, 1715
ScrFI CCNGG 7 cut(s) 183, 571, 843, 909, 1214, 1476, 1896
SduI GDGCHC 5 cut(s) 1012, 1030, 1100, 1119, 1482
SfaNI GCATC 4 cut(s) 126, 367, 616, 664
SfcI CTRYAG 4 cut(s) 399, 930, 1126, 1908
Sfr303I CCGCGG 1 cut(s) 462
SfuI TTCGAA 1 cut(s) 605
SgrBI CCGCGG 1 cut(s) 462
SinI GGWCC 3 cut(s) 1058, 1416, 1618
SmiMI CAYNNNNRTG 2 cut(s) 645, 1572
SmlI CTYRAG 2 cut(s) 756, 1102
SmoI CTYRAG 2 cut(s) 756, 1102
SpeI ACTAGT 1 cut(s) 830
SseBI AGGCCT 1 cut(s) 739
SspMI CTAG 7 cut(s) 831, 903, 1023, 1358, 1422, 1439, 1493
SstI GAGCTC 2 cut(s) 1030, 1100
StuI AGGCCT 1 cut(s) 739
StyD4I CCNGG 7 cut(s) 181, 569, 841, 907, 1212, 1474, 1894
StyI CCWWGG 3 cut(s) 902, 1303, 1371
TaaI ACNGT 5 cut(s) 95, 540, 1070, 1286, 1582
TaiI ACGT 2 cut(s) 471, 500
TaqI TCGA 5 cut(s) 605, 624, 809, 1152, 1275
TatI WGTACW 2 cut(s) 594, 1331
TauI GCSGC 3 cut(s) 361, 383, 558
TfiI GAWTC 4 cut(s) 110, 898, 953, 1471
Tru1I TTAA 3 cut(s) 159, 942, 1403
Tru9I TTAA 3 cut(s) 159, 942, 1403
TscAI CASTG 6 cut(s) 457, 545, 987, 1657, 1732, 1785
TseFI GTSAC 1 cut(s) 1576
Tsp45I GTSAC 1 cut(s) 1576
TspDTI ATGAA 1 cut(s) 629
TspRI CASTG 6 cut(s) 457, 545, 987, 1657, 1732, 1785
VpaK11BI GGWCC 3 cut(s) 1058, 1416, 1618
XagI CCTNNNNNAGG 2 cut(s) 906, 1129
XapI RAATTY 2 cut(s) 352, 975
XcmI CCANNNNNNNNNTGG 2 cut(s) 1628, 1835
XmaJI CCTAGG 1 cut(s) 902
XspI CTAG 7 cut(s) 831, 903, 1023, 1358, 1422, 1439, 1493
ZrmI AGTACT 1 cut(s) 596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.