Rroxscaffold_3G00218280

Serine arginine repetitive matrix protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0012049
Physical Location & Seq
Reverse (-)
454975 .. 457395
2421 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00218280.1

Sequence Viewer

Length: 2058 bp
ATGGGCTCTTGTTTCAGTAAGAAGAAAGGCTCCTCTCCTCCTGCAGTTGCTGCTGATTATGTGGCCACTTCTTCAGCATCAGCAGCGCTAGCGGTGGCTGATCCCAAATCAAAACCCTCCGTGCCAGGAAAACAAGAACAAATTGAAGAAGAAAGCAAAGTCAAAAAAGAGATATTCATCATCAAGCACCGCAAGAGCCACGATGATAGAGACAGGTCACTTCCTCTTCAACAAAATTTACCACAAAAAGCTGATGCCTCTGCGCCAATTACTACTGCCGCTACAACCAGCCCCACCACCGACAATTGCCACCAAGTCTCCATGGATGACAAGAAGGCTGCAGAGGCATCTACGGGCACGGGAGTCCGTGTGAGGACATCCAGCTGCAATAAAGAAGAAGTGGATGCCATACTTATACAGTGTGGAAGGCTAAGCCGCAGCTCTTCTGAGAAGGCTGCTTCTTCTTCCTCAGCTTCTTGTGACCGCGGCAAAAGGTACTCTGGCTCAAAAAGGAGCTATGACTTCGACAACTGTGAGAATGATTATCAAGTCGCTGCAACTTGTGAGGATGCCAAGAATAATGATGATTTTTCTGATGAGAAAACCCACCACCACCGGCAACGCCACCGCCAATCCTCAAGGCATTCTCCTTCTTCACAAGGGAGGAGGAGGACCCCCAGCAGAGAAAGAAACCAGCAGCAGCGATCCAGCAGCAGAGAGAGACGAACAAGTCGATCCCCCGGAAGACGCTTATCATTGGAGCAAAACAACACCAACTGTAATTCCAACACTACCACTGCTGCAACTGCTAATGTCAATTCTGACACTAATCGGCCCGGAAAGATGAAGATGGTATCAGTTCCTGCCACCGTTTCGGTGGTGGACAAGAACAGCAATGGGGAATCAGCAACCACTGGTTCCATCAAGCGGATTTCAGTGAAGAGAAATGCTGGCGAGGCAGTAAATGTAGTGGTGGGTTCAAGGACTGCCGCATCACCCCGTTCTCAGTCCCCTGCAAGAGGAGGAGCAAATGCTAAAGCATCCAATGACAGCCTGCAGCAGCAGCCTTCACTTAGCCGCAGCTCTTCACGAAAAGCAGAGCAATCTCCCTGCAGAAGGAATCCATTGAGTGAGCTCGATCCCAATTCGCTGGCATATCCACAAGCGCATATCAACAACTCCAATAACAAGAGTGCCAGCAATGTTGTGAATCAGCTGAAACCAAACGTGGAGATTAACAGTAACAAAATTGTTGCCCAAGGGATTAACTACAGAAGCAGCACCGCAGGTAGTGCAATGGACAACAAGGTTGTGGAGACAGCAGGAGCCTCAGGACCCCACACATTGACAAGAAGCAGGTCCTCTAGGCGATCCAGAGACCTAGACATCAATCCTGAAACCCTTTCCAATCCTCCTCCATCCTATACTAGGCTATTGCTTGAAGACATACAGAATTTCCACCAGCAGAGCTCCAATGCCGCTGTAGTATCACTCCCGCAGTGTGTGACCAAGGCTTGCTCCATCCTAGAAGCTGTTGCCGACCTCAACTCTACTACAAACTTCTCCGCAGACAGAAAGAGCCCCTCAATAGATCAAATAAACAAAAGCTCATGCTACTACAACAGTTCACTGGGCGCTAATCTCGTTCGAAGGAAAGATATTCCTTTTGTGGAGTCCGAGGTACTTGTTGATGATGATTTACTGGAGCCAAGCTTCCACAAGTATGTGACAGTGAGAAGAGGAGGGGCAGATATGGAGGACCAAGAATCATCTGGTAGCAACAGCTTTGTGAGTGGTTCTCAACAACCACAATGGGGCTTCTCTTCTTCATGGGAACCCAATTCAGCTGACTCCACTGATTGCTGGTCTTCAAGGTCCAACACCAGAGAGGATGATCAGAGTTTTGATATGGATGAAGCAGCCAGGAGGAGACTGAGCCGGAGAAAGACAGATAGACATAACATGCAGAGTGGTGGTGGGATTGGACGCGGCAAGCTTGTAACCGGTTCTAGAGGTCTTCACACAATGCCAGTTGTTGCAGCTGCTGCATCCTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

685

Amino Acids

74.19

Weight (kDa)

9.48

Isoelectric Point (pI)

70.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012049)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65710 AT5G37010
fragaria_vesca FvH4_5g39710
malus_domestica MD12G1074700.v1.1 MD14G1072800.v1.1
prunus_persica Prupe.7G058700_v2.0.a1 Prupe.7G058800_v2.0.a1
pyrus_communis pycom12g06450 pycom14g06270
rosa_chinensis RchiOBHm_Chr7g0242011
rosa_laevigata RLG00000000517
rosa_multiflora Rmu_sc0003559.1_g000015
rosa_roxburghii Rroxscaffold_3G00218280
rosa_rugosa Rorug07G0349800
rosa_samantha Rh7AG504500 Rh7BG476300 Rh7CG521000 Rh7DG490100
rosa_wichuraiana Rw7G042640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 729
Acc36I ACCTGC 2 cut(s) 1277, 1347
AccII CGCG 2 cut(s) 486, 1989
AclWI GGATC 5 cut(s) 95, 699, 729, 1133, 1365
AcoI YGGCCR 1 cut(s) 63
AcsI RAATTY 2 cut(s) 235, 1453
AcuI CTGAAG 1 cut(s) 57
AfaI GTAC 2 cut(s) 497, 1683
AfeI AGCGCT 1 cut(s) 87
AfiI CCNNNNNNNGG 5 cut(s) 927, 1019, 1116, 1428, 1814
AgeI ACCGGT 1 cut(s) 2003
AgsI TTSAA 5 cut(s) 146, 230, 981, 1442, 1872
AjnI CCWGG 2 cut(s) 124, 1922
Alw21I GWGCWC 2 cut(s) 1137, 1472
Alw26I GTCTC 6 cut(s) 204, 322, 715, 1310, 1371, 1924
AlwI GGATC 5 cut(s) 95, 699, 729, 1133, 1365
AlwNI CAGNNNCTG 3 cut(s) 50, 863, 2045
Aor51HI AGCGCT 1 cut(s) 87
AoxI GGCC 2 cut(s) 63, 833
ApoI RAATTY 2 cut(s) 235, 1453
AsiGI ACCGGT 1 cut(s) 2003
AspLEI GCGC 4 cut(s) 88, 265, 1168, 1637
AspS9I GGNCC 6 cut(s) 672, 834, 1334, 1359, 1759, 1875
AsuC2I CCSGG 2 cut(s) 741, 837
AsuHPI GGTGA 1 cut(s) 987
AsuII TTCGAA 1 cut(s) 1648
AsuNHI GCTAGC 1 cut(s) 88
AvaII GGWCC 5 cut(s) 672, 1334, 1359, 1759, 1875
AxyI CCTNAGG 1 cut(s) 1330
BaeGI GKGCMC 1 cut(s) 359
BalI TGGCCA 1 cut(s) 65
BanII GRGCYC 4 cut(s) 8, 1137, 1472, 1583
BbsI GAAGAC 4 cut(s) 751, 1449, 1860, 2009
Bbv12I GWGCWC 2 cut(s) 1137, 1472
BbvCI CCTCAGC 1 cut(s) 469
BccI CCATC 4 cut(s) 844, 929, 1426, 1529
BciT130I CCWGG 2 cut(s) 126, 1924
BclI TGATCA 1 cut(s) 1894
BcnI CCSGG 2 cut(s) 741, 837
BcoDI GTCTC 6 cut(s) 204, 322, 715, 1310, 1371, 1924
BfaI CTAG 6 cut(s) 89, 1365, 1382, 1428, 1526, 2010
BfmI CTRYAG 6 cut(s) 42, 339, 1055, 1111, 1270, 1482
BfoI RGCGCY 2 cut(s) 89, 1638
BfuAI ACCTGC 2 cut(s) 1277, 1347
BlpI GCTNAGC 1 cut(s) 431
Bme1390I CCNGG 4 cut(s) 126, 741, 837, 1924
Bme18I GGWCC 5 cut(s) 672, 1334, 1359, 1759, 1875
BmgT120I GGNCC 6 cut(s) 672, 834, 1334, 1359, 1759, 1875
BmiI GGNNCC 7 cut(s) 31, 674, 919, 1327, 1336, 1707, 1836
BmrFI CCNGG 4 cut(s) 126, 741, 837, 1924
BmrI ACTGGG 1 cut(s) 1640
BmsI GCATC 7 cut(s) 86, 244, 356, 394, 559, 1001, 1049
BmtI GCTAGC 1 cut(s) 92
BmuI ACTGGG 1 cut(s) 1640
BpiI GAAGAC 4 cut(s) 751, 1449, 1860, 2009
BplI GAGNNNNNCTC 2 cut(s) 1783, 1815
BpmI CTGGAG 1 cut(s) 1724
Bpu10I CCTNAGC 1 cut(s) 469
Bpu1102I GCTNAGC 1 cut(s) 431
Bpu14I TTCGAA 1 cut(s) 1648
BpuEI CTTGAG 1 cut(s) 622
BpuMI CCSGG 2 cut(s) 741, 837
BsaBI GATNNNNATC 1 cut(s) 176
BsaI GGTCTC 1 cut(s) 1371
BsaJI CCNNGG 6 cut(s) 321, 484, 739, 1258, 1509, 1677
BsaWI WCCGGW 1 cut(s) 2003
BsaXI ACNNNNNCTCC 4 cut(s) 302, 332, 354, 384
Bsc4I CCNNNNNNNGG 5 cut(s) 927, 1019, 1116, 1428, 1814
Bse118I RCCGGY 2 cut(s) 615, 2003
Bse1I ACTGG 4 cut(s) 919, 1635, 1707, 2030
Bse21I CCTNAGG 1 cut(s) 1330
Bse3DI GCAATG 3 cut(s) 901, 1207, 1302
Bse8I GATNNNNATC 1 cut(s) 176
BseBI CCWGG 2 cut(s) 126, 1924
BseDI CCNNGG 6 cut(s) 321, 484, 739, 1258, 1509, 1677
BseJI GATNNNNATC 1 cut(s) 176
BseLI CCNNNNNNNGG 5 cut(s) 927, 1019, 1116, 1428, 1814
BseMI GCAATG 3 cut(s) 901, 1207, 1302
BseMII CTCAG 5 cut(s) 438, 483, 1019, 1344, 1925
BseNI ACTGG 4 cut(s) 919, 1635, 1707, 2030
BseRI GAGGAG 9 cut(s) 22, 27, 679, 682, 1035, 1038, 1404, 1755, 1942
BseSI GKGCMC 1 cut(s) 359
BseYI CCCAGC 1 cut(s) 677
Bsh1236I CGCG 2 cut(s) 486, 1989
BshFI GGCC 2 cut(s) 65, 835
BshTI ACCGGT 1 cut(s) 2003
BsiHKAI GWGCWC 2 cut(s) 1137, 1472
BsiSI CCGG 5 cut(s) 616, 741, 837, 1939, 2004
BslFI GGGAC 1 cut(s) 994
BslI CCNNNNNNNGG 5 cut(s) 927, 1019, 1116, 1428, 1814
BsmAI GTCTC 6 cut(s) 204, 322, 715, 1310, 1371, 1924
BsmBI CGTCTC 1 cut(s) 715
BsmFI GGGAC 1 cut(s) 994
BsmI GAATGC 1 cut(s) 643
BsnI GGCC 2 cut(s) 65, 835
Bso31I GGTCTC 1 cut(s) 1371
Bsp119I TTCGAA 1 cut(s) 1648
Bsp1286I GDGCHC 5 cut(s) 8, 359, 1137, 1472, 1583
Bsp143I GATC 7 cut(s) 100, 704, 734, 1138, 1370, 1591, 1894
Bsp1720I GCTNAGC 1 cut(s) 431
Bsp19I CCATGG 1 cut(s) 321
BspANI GGCC 2 cut(s) 65, 835
BspCNI CTCAG 5 cut(s) 439, 482, 1018, 1343, 1926
BspFNI CGCG 2 cut(s) 486, 1989
BspLI GGNNCC 7 cut(s) 31, 674, 919, 1327, 1336, 1707, 1836
BspMAI CTGCAG 4 cut(s) 46, 343, 1059, 1115
BspMI ACCTGC 2 cut(s) 1277, 1347
BspOI GCTAGC 1 cut(s) 92
BspPI GGATC 5 cut(s) 95, 699, 729, 1133, 1365
BspQI GCTCTTC 2 cut(s) 448, 1090
BspT104I TTCGAA 1 cut(s) 1648
BspTNI GGTCTC 1 cut(s) 1371
BsrDI GCAATG 3 cut(s) 901, 1207, 1302
BsrFI RCCGGY 2 cut(s) 615, 2003
BsrI ACTGG 4 cut(s) 919, 1635, 1707, 2030
BssAI RCCGGY 2 cut(s) 615, 2003
BssECI CCNNGG 6 cut(s) 321, 484, 739, 1258, 1509, 1677
BssMI GATC 7 cut(s) 100, 704, 734, 1138, 1370, 1591, 1894
BssT1I CCWWGG 3 cut(s) 321, 1258, 1509
Bst2UI CCWGG 2 cut(s) 126, 1924
Bst4CI ACNGT 7 cut(s) 420, 533, 779, 871, 1241, 1625, 1732
Bst6I CTCTTC 6 cut(s) 231, 448, 935, 1090, 1732, 1828
BstAPI GCANNNNNTGC 3 cut(s) 50, 1292, 2045
BstBI TTCGAA 1 cut(s) 1648
BstC8I GCNNGC 7 cut(s) 90, 952, 1055, 1152, 1198, 1516, 1994
BstDEI CTNAG 7 cut(s) 431, 447, 469, 1005, 1073, 1330, 1934
BstDSI CCRYGG 2 cut(s) 321, 484
BstENI CCTNNNNNAGG 3 cut(s) 1017, 1114, 1426
BstFNI CGCG 2 cut(s) 486, 1989
BstH2I RGCGCY 2 cut(s) 89, 1638
BstHHI GCGC 4 cut(s) 88, 265, 1168, 1637
BstKTI GATC 7 cut(s) 103, 707, 737, 1141, 1373, 1594, 1897
BstMAI GTCTC 6 cut(s) 204, 322, 715, 1310, 1371, 1924
BstMBI GATC 7 cut(s) 100, 704, 734, 1138, 1370, 1591, 1894
BstMWI GCNNNNNNNGC 9 cut(s) 50, 83, 89, 344, 806, 956, 1063, 1292, 2045
BstNI CCWGG 2 cut(s) 126, 1924
BstNSI RCATGY 1 cut(s) 1966
BstSCI CCNGG 4 cut(s) 124, 739, 835, 1922
BstSFI CTRYAG 6 cut(s) 42, 339, 1055, 1111, 1270, 1482
BstSLI GKGCMC 1 cut(s) 359
BstUI CGCG 2 cut(s) 486, 1989
BstV2I GAAGAC 4 cut(s) 751, 1449, 1860, 2009
BstXI CCANNNNNNTGG 1 cut(s) 1150
Bsu36I CCTNAGG 1 cut(s) 1330
BsuRI GGCC 2 cut(s) 65, 835
BtgI CCRYGG 2 cut(s) 321, 484
BtsI GCAGTG 2 cut(s) 795, 1505
BtsIMutI CAGTG 8 cut(s) 425, 795, 912, 942, 1505, 1628, 1737, 1854
BveI ACCTGC 2 cut(s) 1277, 1347
Cac8I GCNNGC 7 cut(s) 90, 952, 1055, 1152, 1198, 1516, 1994
CaiI CAGNNNCTG 3 cut(s) 50, 863, 2045
CfoI GCGC 4 cut(s) 88, 265, 1168, 1637
Cfr10I RCCGGY 2 cut(s) 615, 2003
Cfr13I GGNCC 6 cut(s) 672, 834, 1334, 1359, 1759, 1875
Cfr42I CCGCGG 1 cut(s) 487
CseI GACGC 2 cut(s) 756, 1995
Csp6I GTAC 2 cut(s) 496, 1682
CspAI ACCGGT 1 cut(s) 2003
CviAII CATG 4 cut(s) 322, 1611, 1830, 1963
CviQI GTAC 2 cut(s) 496, 1682
DdeI CTNAG 7 cut(s) 431, 447, 469, 1005, 1073, 1330, 1934
DpnI GATC 7 cut(s) 102, 706, 736, 1140, 1372, 1593, 1896
DpnII GATC 7 cut(s) 100, 704, 734, 1138, 1370, 1591, 1894
DrdI GACNNNNNNGTC 1 cut(s) 729
DseDI GACNNNNNNGTC 1 cut(s) 729
EaeI YGGCCR 1 cut(s) 63
Eam1104I CTCTTC 6 cut(s) 231, 448, 935, 1090, 1732, 1828
EarI CTCTTC 6 cut(s) 231, 448, 935, 1090, 1732, 1828
Ecl136II GAGCTC 2 cut(s) 1135, 1470
Eco130I CCWWGG 3 cut(s) 321, 1258, 1509
Eco24I GRGCYC 4 cut(s) 8, 1137, 1472, 1583
Eco31I GGTCTC 1 cut(s) 1371
Eco47I GGWCC 5 cut(s) 672, 1334, 1359, 1759, 1875
Eco47III AGCGCT 1 cut(s) 87
Eco53kI GAGCTC 2 cut(s) 1135, 1470
Eco57I CTGAAG 1 cut(s) 57
Eco81I CCTNAGG 1 cut(s) 1330
EcoICRI GAGCTC 2 cut(s) 1135, 1470
EcoNI CCTNNNNNAGG 3 cut(s) 1017, 1114, 1426
EcoO109I RGGNCCY 3 cut(s) 672, 1334, 1359
EcoRII CCWGG 2 cut(s) 124, 1922
EcoT14I CCWWGG 3 cut(s) 321, 1258, 1509
EcoT38I GRGCYC 4 cut(s) 8, 1137, 1472, 1583
ErhI CCWWGG 3 cut(s) 321, 1258, 1509
Esp3I CGTCTC 1 cut(s) 715
FaeI CATG 4 cut(s) 325, 1614, 1833, 1966
FaqI GGGAC 1 cut(s) 994
FatI CATG 4 cut(s) 321, 1610, 1829, 1962
FauI CCCGC 1 cut(s) 1503
FbaI TGATCA 1 cut(s) 1894
FriOI GRGCYC 4 cut(s) 8, 1137, 1472, 1583
FspBI CTAG 6 cut(s) 89, 1365, 1382, 1428, 1526, 2010
GlaI GCGC 4 cut(s) 87, 264, 1167, 1636
GsaI CCCAGC 1 cut(s) 681
GsuI CTGGAG 1 cut(s) 1724
HaeII RGCGCY 2 cut(s) 89, 1638
HaeIII GGCC 2 cut(s) 65, 835
HapII CCGG 5 cut(s) 616, 741, 837, 1939, 2004
HgaI GACGC 2 cut(s) 756, 1995
HhaI GCGC 4 cut(s) 88, 265, 1168, 1637
Hin1II CATG 4 cut(s) 325, 1614, 1833, 1966
Hin6I GCGC 4 cut(s) 86, 263, 1166, 1635
HinP1I GCGC 4 cut(s) 86, 263, 1166, 1635
HindIII AAGCTT 2 cut(s) 1711, 1994
HinfI GANTC 7 cut(s) 363, 902, 1120, 1210, 1673, 1766, 1850
HpaII CCGG 5 cut(s) 616, 741, 837, 1939, 2004
HphI GGTGA 1 cut(s) 987
Hpy166II GTNNAC 2 cut(s) 883, 1628
Hpy188I TCNGA 5 cut(s) 448, 595, 823, 1678, 1899
Hpy188III TCNNGA 5 cut(s) 1089, 1332, 1374, 1394, 2010
Hpy8I GTNNAC 2 cut(s) 883, 1628
HpyAV CCTTC 7 cut(s) 328, 420, 445, 660, 1077, 1110, 1644
HpyCH4III ACNGT 7 cut(s) 420, 533, 779, 871, 1241, 1625, 1732
HpyCH4IV ACGT 1 cut(s) 1227
HpyF10VI GCNNNNNNNGC 9 cut(s) 50, 83, 89, 344, 806, 956, 1063, 1292, 2045
HpyF3I CTNAG 7 cut(s) 431, 447, 469, 1005, 1073, 1330, 1934
HpySE526I ACGT 1 cut(s) 1227
Hsp92II CATG 4 cut(s) 325, 1614, 1833, 1966
HspAI GCGC 4 cut(s) 86, 263, 1166, 1635
Ksp22I TGATCA 1 cut(s) 1894
KspI CCGCGG 1 cut(s) 487
Kzo9I GATC 7 cut(s) 100, 704, 734, 1138, 1370, 1591, 1894
LguI GCTCTTC 2 cut(s) 448, 1090
LmnI GCTCC 8 cut(s) 35, 513, 760, 1025, 1325, 1475, 1523, 1705
LweI GCATC 7 cut(s) 86, 244, 356, 394, 559, 1001, 1049
MaeI CTAG 6 cut(s) 89, 1365, 1382, 1428, 1526, 2010
MaeII ACGT 1 cut(s) 1227
MaeIII GTNAC 6 cut(s) 216, 479, 1241, 1504, 1726, 1999
MalI GATC 7 cut(s) 102, 706, 736, 1140, 1372, 1593, 1896
MboI GATC 7 cut(s) 100, 704, 734, 1138, 1370, 1591, 1894
MfeI CAATTG 1 cut(s) 304
MhlI GDGCHC 5 cut(s) 8, 359, 1137, 1472, 1583
MlsI TGGCCA 1 cut(s) 65
MluNI TGGCCA 1 cut(s) 65
MlyI GAGTC 3 cut(s) 372, 1682, 1844
MmeI TCCRAC 2 cut(s) 810, 1902
Mox20I TGGCCA 1 cut(s) 65
MscI TGGCCA 1 cut(s) 65
MseI TTAA 2 cut(s) 1236, 1266
MslI CAYNNNNRTG 1 cut(s) 1722
Msp20I TGGCCA 1 cut(s) 65
MspA1I CMGCKG 6 cut(s) 384, 486, 1216, 1481, 1847, 2042
MspI CCGG 5 cut(s) 616, 741, 837, 1939, 2004
MspR9I CCNGG 4 cut(s) 126, 741, 837, 1924
MunI CAATTG 1 cut(s) 304
Mva1269I GAATGC 1 cut(s) 643
MvaI CCWGG 2 cut(s) 126, 1924
MvnI CGCG 2 cut(s) 486, 1989
MwoI GCNNNNNNNGC 9 cut(s) 50, 83, 89, 344, 806, 956, 1063, 1292, 2045
NciI CCSGG 2 cut(s) 741, 837
NcoI CCATGG 1 cut(s) 321
NdeII GATC 7 cut(s) 100, 704, 734, 1138, 1370, 1591, 1894
NheI GCTAGC 1 cut(s) 88
NlaIII CATG 4 cut(s) 325, 1614, 1833, 1966
NlaIV GGNNCC 7 cut(s) 31, 674, 919, 1327, 1336, 1707, 1836
NmuCI GTSAC 4 cut(s) 216, 479, 1504, 1726
NspI RCATGY 1 cut(s) 1966
NspV TTCGAA 1 cut(s) 1648
PciSI GCTCTTC 2 cut(s) 448, 1090
PcsI WCGNNNNNNNCGW 1 cut(s) 730
PctI GAATGC 1 cut(s) 643
PfeI GAWTC 4 cut(s) 902, 1120, 1210, 1766
PinAI ACCGGT 1 cut(s) 2003
PleI GAGTC 3 cut(s) 371, 1681, 1844
PpsI GAGTC 3 cut(s) 371, 1681, 1844
PpuMI RGGWCCY 3 cut(s) 672, 1334, 1359
Psp124BI GAGCTC 2 cut(s) 1137, 1472
Psp5II RGGWCCY 3 cut(s) 672, 1334, 1359
Psp6I CCWGG 2 cut(s) 124, 1922
PspFI CCCAGC 1 cut(s) 677
PspGI CCWGG 2 cut(s) 124, 1922
PspN4I GGNNCC 7 cut(s) 31, 674, 919, 1327, 1336, 1707, 1836
PspPI GGNCC 6 cut(s) 672, 834, 1334, 1359, 1759, 1875
PspPPI RGGWCCY 3 cut(s) 672, 1334, 1359
PstI CTGCAG 4 cut(s) 46, 343, 1059, 1115
PstNI CAGNNNCTG 3 cut(s) 50, 863, 2045
PvuII CAGCTG 4 cut(s) 384, 1216, 1847, 2042
RsaI GTAC 2 cut(s) 497, 1683
RsaNI GTAC 2 cut(s) 496, 1682
RseI CAYNNNNRTG 1 cut(s) 1722
SacI GAGCTC 2 cut(s) 1137, 1472
SacII CCGCGG 1 cut(s) 487
SapI GCTCTTC 2 cut(s) 448, 1090
SaqAI TTAA 2 cut(s) 1236, 1266
Sau3AI GATC 7 cut(s) 100, 704, 734, 1138, 1370, 1591, 1894
Sau96I GGNCC 6 cut(s) 672, 834, 1334, 1359, 1759, 1875
SchI GAGTC 3 cut(s) 372, 1682, 1844
ScrFI CCNGG 4 cut(s) 126, 741, 837, 1924
SduI GDGCHC 5 cut(s) 8, 359, 1137, 1472, 1583
SfaNI GCATC 7 cut(s) 86, 244, 356, 394, 559, 1001, 1049
SfcI CTRYAG 6 cut(s) 42, 339, 1055, 1111, 1270, 1482
Sfr303I CCGCGG 1 cut(s) 487
SfuI TTCGAA 1 cut(s) 1648
SgrBI CCGCGG 1 cut(s) 487
SinI GGWCC 5 cut(s) 672, 1334, 1359, 1759, 1875
SmiMI CAYNNNNRTG 1 cut(s) 1722
SmlI CTYRAG 1 cut(s) 637
SmoI CTYRAG 1 cut(s) 637
SspMI CTAG 6 cut(s) 89, 1365, 1382, 1428, 1526, 2010
SstI GAGCTC 2 cut(s) 1137, 1472
StyD4I CCNGG 4 cut(s) 124, 739, 835, 1922
StyI CCWWGG 3 cut(s) 321, 1258, 1509
TaaI ACNGT 7 cut(s) 420, 533, 779, 871, 1241, 1625, 1732
TaiI ACGT 1 cut(s) 1230
TaqI TCGA 4 cut(s) 525, 733, 1137, 1648
TauI GCSGC 7 cut(s) 281, 438, 489, 992, 1080, 1481, 1992
TfiI GAWTC 4 cut(s) 902, 1120, 1210, 1766
Tru1I TTAA 2 cut(s) 1236, 1266
Tru9I TTAA 2 cut(s) 1236, 1266
TscAI CASTG 8 cut(s) 425, 802, 919, 942, 1505, 1635, 1737, 1861
TseFI GTSAC 4 cut(s) 216, 479, 1504, 1726
Tsp45I GTSAC 4 cut(s) 216, 479, 1504, 1726
TspDTI ATGAA 4 cut(s) 166, 860, 1818, 1929
TspGWI ACGGA 2 cut(s) 109, 356
TspRI CASTG 8 cut(s) 425, 802, 919, 942, 1505, 1635, 1737, 1861
VpaK11BI GGWCC 5 cut(s) 672, 1334, 1359, 1759, 1875
XagI CCTNNNNNAGG 3 cut(s) 1017, 1114, 1426
XapI RAATTY 2 cut(s) 235, 1453
XbaI TCTAGA 1 cut(s) 2009
XceI RCATGY 1 cut(s) 1966
XcmI CCANNNNNNNNNTGG 2 cut(s) 874, 1769
XspI CTAG 6 cut(s) 89, 1365, 1382, 1428, 1526, 2010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.