Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0014411

Physical Location & Seq

Genomic Coordinates Reverse (-)

27864481 .. 27866244

Gene Structure 1764 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1197500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGTGCCAAACTTCAAAAACCAAAGCCATCCTATCCTTATTGCAAGGATGCAACAGCCTCCAACGGTTCAAAAAAATCCACGCCCACGTCATCACCAACGGTCTCCAACCCCACCCCGCCATTTCAAACAAGCTGCTCAACTTCTGCGCCGTCTCCGTCTCCGGCAGCTTGCCCTACGCTCAGCTGCTCTTCCACCACCACCTCCAAAACCCACAAACCCAAGACTGGAATTCCCTCATCAGAGGCTTTTCCAACAGCCCTTCTCCTCTCCAAGCCATTTTTTACTACAATCGCATGCTTTCATCTGGTTCCGATTCTTCCCCTGATACATACACTTTCTCCTTCGTGCTCAAGGCCTGTGAGAAACTGAAGGCCCGGAAGAAGTGTGAAGAGATTCATGGAGCTGTGGTAAGATTTGGGTACGAGAGTGACGTCGTTGTTTGCACCAATCTTATAAGGTCGTATGCGGGAGATGGGTTGATTGAGAGTGCAGAGAAGGTGTTTGATAATATGCCTGAGAGAGACTTGGTGTCTTGGAATTCTATGATTTCGTGTTACTCTCAACAGGGCCTTCACCATGAGGCGTTGAAGATGTATAATGTGATGAGGAATGAGAATTTGGGTCTTGATGGGTTTACGATTGTTGGATTGCTTTCGTCTTGTGCTCACTTGGGAGCATTGAATACTGGAGTTCAGATGCATAGAATCACTAGTGAAAAGGGGCTTCTGGGGAATGTTTATGTTGGGAATGCGCTTATTGATATGTATGCTAAATGTGGTAATTTGGATAGTGCTCGTAGTGTGTTTGAGAGGATGCGGAAGCGGGATGTTTTTACTTGGAACTCCATGATTGTTGGGTATGGAGTACACGGTTGTGGGGACGAAGCAATCTCATTTTTTGAGCGTATGTTGGTGGAAGGAGTCCAGCCGAACTCCATCACATTTCTTGGTTTGTTATGTGGATGCAGTCACCAAGGCTTGGTAGAGAAGGGTGTTGAGTACTGCAATGTGATGATCTCTAAGTTCAATGTTAAGCCTGGAATTAAGCATTACGGGTGCCTGGTGGATCTGTTTGGCAGAGCTGGGATGCTCGAAAGGGCACTTCAAGTTATTAGGACTTCTCGCGCCCAGGACGATCCAGTCCTTTGGCGGACCCTGCTTGGCTCTTGCAAGATTCATAAGAATGTAGAAATAGGGGAAATTGCCATGAGGAATCTAATCCAGCTAGGGTCATCGAATGCAGGGGACTATGTACTTCTTGCTACAATCTATTCAAAAGAGAAAAATGCAGATGGTGTTGCAAAGATGAGAAAGTTGATTAAAACCGAGGGAGTAAAGACAACTCCTGGTTGGAGCTGGATTGAAATTGGTGATCAGGTTCACAAATTTGTTGTGGACGACAAGTCACATCCTGACACTAATGAAATTTATCGGAAACTGAGAGCAGTTGTTAATCGAGCTGCTCTGCACGGTTATGTCCAGGAGAAATGTCTTATCACAACTTCTGAGTTTCCCTTCATAGACACAGATTGTTTAGGAACTTCTGCTTCATGTCACAGCGAGAAGCTGGCAATCACTTTTGGCCTGGCAAGAACTCCAGAAGGAACGCCTTTACGAATAGTTAAGAACCTGAGAGTTTGTAGAGATTGCCATTCGTTTACAAAGTTTGTTTCGCAAGCTTTCGATCGAGAAATAATTGTTAGGGATCGTGTTCGGTTTCATCACTTCAAGGGTGGATTATGTTCATGTAAAGATTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

588

Amino Acids

65.64

Weight (kDa)

8.82

Isoelectric Point (pI)

36.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	175 - 223	5.7e-09	PPR repeat family
PPR	PF01535	177 - 206	5.5e-08	PPR repeat
PPR	PF01535	250 - 276	4e-06	PPR repeat
PPR_2	PF13041	275 - 323	3.7e-11	PPR repeat family
PPR	PF01535	278 - 308	5.6e-08	PPR repeat
E_motif	PF20431	393 - 455	1.7e-16	E motif
Eplus_motif	PF20430	460 - 484	5e-06	E+ motif
DYW_deaminase	PF14432	518 - 587	3.7e-33	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56550 AT3G56550
fragaria_vesca	FvH4_6g08690
malus_domestica	MD04G1184300.v1.1 MD12G1197500.v1.1
prunus_persica	Prupe.6G302800_v2.0.a1
pyrus_communis	pycom04g16330 pycom12g18380
rosa_chinensis	RchiOBHm_Chr3g0458831
rosa_laevigata	RLG00000025132
rosa_multiflora	Rmu_co8385739.1_g000001
rosa_roxburghii	Rroxscaffold_6G00420760
rosa_rugosa	Rorug03G0032200
rosa_samantha	Rh3BG092700 Rh3CG093000 Rh3DG093700
rosa_wichuraiana	Rw3G007690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	455
AasI	GACNNNNNNGTC	1 cut(s)	1139
AatII	GACGTC	1 cut(s)	435
AccB1I	GGYRCC	1 cut(s)	1056
AccB7I	CCANNNNNTGG	1 cut(s)	979
AccII	CGCG	1 cut(s)	1125
AciI	CCGC	5 cut(s)	117, 467, 817, 823, 1150
AclWI	GGATC	3 cut(s)	1074, 1130, 1713
AcsI	RAATTY	5 cut(s)	229, 538, 616, 1385, 1425
AcuI	CTGAAG	1 cut(s)	389
AcyI	GRCGYC	1 cut(s)	432
AfaI	GTAC	4 cut(s)	422, 867, 1001, 1254
AfiI	CCNNNNNNNGG	2 cut(s)	225, 979
AhdI	GACNNNNNGTC	2 cut(s)	529, 1402
AhlI	ACTAGT	1 cut(s)	710
AjiI	CACGTC	1 cut(s)	88
AjnI	CCWGG	6 cut(s)	1036, 1059, 1128, 1345, 1479, 1584
AjuI	GAANNNNNNNTTGG	2 cut(s)	602, 634
AleI	CACNNNNGTG	1 cut(s)	873
Alw21I	GWGCWC	3 cut(s)	351, 667, 796
Alw26I	GTCTC	4 cut(s)	107, 157, 163, 516
AlwI	GGATC	3 cut(s)	1074, 1130, 1713
AoxI	GGCC	4 cut(s)	354, 372, 568, 1582
ApeKI	GCWGC	4 cut(s)	133, 165, 184, 1460
ApoI	RAATTY	5 cut(s)	229, 538, 616, 1385, 1425
Asp700I	GAANNNNTTC	1 cut(s)	393
AspLEI	GCGC	3 cut(s)	149, 754, 1127
AspS9I	GGNCC	3 cut(s)	373, 568, 1152
AsuC2I	CCSGG	1 cut(s)	376
AsuHPI	GGTGA	4 cut(s)	85, 566, 962, 1382
AvaII	GGWCC	1 cut(s)	1152
BaeGI	GKGCMC	1 cut(s)	1102
BaeI	ACNNNNGTAYC	2 cut(s)	412, 445
BanI	GGYRCC	1 cut(s)	1056
Bbv12I	GWGCWC	3 cut(s)	351, 667, 796
BbvI	GCAGC	4 cut(s)	120, 171, 177, 1447
BccI	CCATC	5 cut(s)	35, 467, 623, 944, 1286
BceAI	ACGGC	1 cut(s)	134
BciT130I	CCWGG	6 cut(s)	1038, 1061, 1130, 1347, 1481, 1586
BclI	TGATCA	1 cut(s)	1372
BcnI	CCSGG	1 cut(s)	376
BcoDI	GTCTC	4 cut(s)	107, 157, 163, 516
BcuI	ACTAGT	1 cut(s)	710
BfaI	CTAG	2 cut(s)	711, 1226
BisI	GCNGC	4 cut(s)	134, 166, 185, 1461
BlpI	GCTNAGC	1 cut(s)	180
BlsI	GCNGC	4 cut(s)	135, 167, 186, 1462
BmcAI	AGTACT	1 cut(s)	1001
Bme1390I	CCNGG	7 cut(s)	376, 1038, 1061, 1130, 1347, 1481, 1586
Bme18I	GGWCC	1 cut(s)	1152
BmeRI	GACNNNNNGTC	2 cut(s)	529, 1402
BmgBI	CACGTC	1 cut(s)	88
BmgT120I	GGNCC	3 cut(s)	373, 568, 1152
BmiI	GGNNCC	3 cut(s)	310, 1058, 1154
BmrFI	CCNGG	7 cut(s)	376, 1038, 1061, 1130, 1347, 1481, 1586
BmsI	GCATC	5 cut(s)	38, 687, 804, 953, 1077
BpmI	CTGGAG	2 cut(s)	708, 1581
Bpu1102I	GCTNAGC	1 cut(s)	180
BpuEI	CTTGAG	1 cut(s)	335
BpuMI	CCSGG	1 cut(s)	376
BsaHI	GRCGYC	1 cut(s)	432
BsaI	GGTCTC	1 cut(s)	107
BsaJI	CCNNGG	3 cut(s)	973, 1128, 1326
BsaXI	ACNNNNNCTCC	4 cut(s)	323, 353, 393, 423
Bsc4I	CCNNNNNNNGG	2 cut(s)	225, 979
Bse1I	ACTGG	3 cut(s)	230, 691, 1139
Bse3DI	GCAATG	1 cut(s)	1012
BseBI	CCWGG	6 cut(s)	1038, 1061, 1130, 1347, 1481, 1586
BseDI	CCNNGG	3 cut(s)	973, 1128, 1326
BseGI	GGATG	7 cut(s)	27, 53, 819, 832, 968, 1092, 1408
BseLI	CCNNNNNNNGG	2 cut(s)	225, 979
BseMI	GCAATG	1 cut(s)	1012
BseMII	CTCAG	5 cut(s)	194, 507, 1430, 1497, 1622
BseNI	ACTGG	3 cut(s)	230, 691, 1139
BseRI	GAGGAG	1 cut(s)	255
BseSI	GKGCMC	1 cut(s)	1102
BseXI	GCAGC	4 cut(s)	120, 171, 177, 1447
BseYI	CCCAGC	1 cut(s)	1082
BsgI	GTGCAG	2 cut(s)	510, 1451
Bsh1236I	CGCG	1 cut(s)	1125
Bsh1285I	CGRYCG	1 cut(s)	1687
BshFI	GGCC	4 cut(s)	356, 374, 570, 1584
BshNI	GGYRCC	1 cut(s)	1056
BsiEI	CGRYCG	1 cut(s)	1687
BsiHKAI	GWGCWC	3 cut(s)	351, 667, 796
BsiSI	CCGG	2 cut(s)	162, 376
BslFI	GGGAC	2 cut(s)	893, 1259
BslI	CCNNNNNNNGG	2 cut(s)	225, 979
BsmAI	GTCTC	4 cut(s)	107, 157, 163, 516
BsmBI	CGTCTC	2 cut(s)	157, 163
BsmFI	GGGAC	2 cut(s)	893, 1259
BsmI	GAATGC	2 cut(s)	754, 1243
BsnI	GGCC	4 cut(s)	356, 374, 570, 1584
Bso31I	GGTCTC	1 cut(s)	107
Bsp1286I	GDGCHC	4 cut(s)	351, 667, 796, 1102
Bsp143I	GATC	6 cut(s)	1014, 1066, 1135, 1372, 1684, 1705
Bsp1720I	GCTNAGC	1 cut(s)	180
BspACI	CCGC	5 cut(s)	117, 467, 817, 823, 1150
BspANI	GGCC	4 cut(s)	356, 374, 570, 1584
BspCNI	CTCAG	5 cut(s)	193, 508, 1431, 1498, 1623
BspFNI	CGCG	1 cut(s)	1125
BspLI	GGNNCC	3 cut(s)	310, 1058, 1154
BspPI	GGATC	3 cut(s)	1074, 1130, 1713
BspQI	GCTCTTC	1 cut(s)	194
BspT107I	GGYRCC	1 cut(s)	1056
BspTNI	GGTCTC	1 cut(s)	107
BsrDI	GCAATG	1 cut(s)	1012
BsrI	ACTGG	3 cut(s)	230, 691, 1139
BssECI	CCNNGG	3 cut(s)	973, 1128, 1326
BssMI	GATC	6 cut(s)	1014, 1066, 1135, 1372, 1684, 1705
BssNI	GRCGYC	1 cut(s)	432
BssT1I	CCWWGG	1 cut(s)	973
Bst2UI	CCWGG	6 cut(s)	1038, 1061, 1130, 1347, 1481, 1586
Bst4CI	ACNGT	4 cut(s)	66, 101, 872, 1472
Bst6I	CTCTTC	2 cut(s)	194, 384
BstACI	GRCGYC	1 cut(s)	432
BstC8I	GCNNGC	4 cut(s)	170, 296, 1569, 1677
BstDEI	CTNAG	6 cut(s)	180, 516, 1020, 1439, 1506, 1631
BstF5I	GGATG	7 cut(s)	27, 53, 819, 832, 968, 1092, 1408
BstFNI	CGCG	1 cut(s)	1125
BstHHI	GCGC	3 cut(s)	149, 754, 1127
BstKTI	GATC	6 cut(s)	1017, 1069, 1138, 1375, 1687, 1708
BstMAI	GTCTC	4 cut(s)	107, 157, 163, 516
BstMBI	GATC	6 cut(s)	1014, 1066, 1135, 1372, 1684, 1705
BstMCI	CGRYCG	1 cut(s)	1687
BstMWI	GCNNNNNNNGC	1 cut(s)	1156
BstNI	CCWGG	6 cut(s)	1038, 1061, 1130, 1347, 1481, 1586
BstNSI	RCATGY	1 cut(s)	298
BstSCI	CCNGG	7 cut(s)	374, 1036, 1059, 1128, 1345, 1479, 1584
BstSLI	GKGCMC	1 cut(s)	1102
BstUI	CGCG	1 cut(s)	1125
BstV1I	GCAGC	4 cut(s)	120, 171, 177, 1447
BstX2I	RGATCY	1 cut(s)	1066
BstXI	CCANNNNNNTGG	1 cut(s)	1146
BstYI	RGATCY	1 cut(s)	1066
BsuRI	GGCC	4 cut(s)	356, 374, 570, 1584
BtrI	CACGTC	1 cut(s)	88
BtsCI	GGATG	7 cut(s)	27, 53, 819, 832, 968, 1092, 1408
Cac8I	GCNNGC	4 cut(s)	170, 296, 1569, 1677
CfoI	GCGC	3 cut(s)	149, 754, 1127
Cfr13I	GGNCC	3 cut(s)	373, 568, 1152
Csp6I	GTAC	4 cut(s)	421, 866, 1000, 1253
CviAII	CATG	7 cut(s)	295, 398, 578, 847, 1207, 1551, 1746
CviQI	GTAC	4 cut(s)	421, 866, 1000, 1253
DdeI	CTNAG	6 cut(s)	180, 516, 1020, 1439, 1506, 1631
DpnI	GATC	6 cut(s)	1016, 1068, 1137, 1374, 1686, 1707
DpnII	GATC	6 cut(s)	1014, 1066, 1135, 1372, 1684, 1705
DrdI	GACNNNNNNGTC	1 cut(s)	1139
DriI	GACNNNNNGTC	2 cut(s)	529, 1402
DseDI	GACNNNNNNGTC	1 cut(s)	1139
Eam1104I	CTCTTC	2 cut(s)	194, 384
Eam1105I	GACNNNNNGTC	2 cut(s)	529, 1402
EarI	CTCTTC	2 cut(s)	194, 384
EciI	GGCGGA	1 cut(s)	1165
Eco130I	CCWWGG	1 cut(s)	973
Eco147I	AGGCCT	1 cut(s)	356
Eco31I	GGTCTC	1 cut(s)	107
Eco47I	GGWCC	1 cut(s)	1152
Eco57I	CTGAAG	1 cut(s)	389
EcoO109I	RGGNCCY	1 cut(s)	568
EcoRI	GAATTC	2 cut(s)	229, 538
EcoRII	CCWGG	6 cut(s)	1036, 1059, 1128, 1345, 1479, 1584
EcoT14I	CCWWGG	1 cut(s)	973
EcoT22I	ATGCAT	1 cut(s)	702
ErhI	CCWWGG	1 cut(s)	973
Esp3I	CGTCTC	2 cut(s)	157, 163
FaeI	CATG	7 cut(s)	298, 401, 581, 850, 1210, 1554, 1749
FaqI	GGGAC	2 cut(s)	893, 1259
FatI	CATG	7 cut(s)	294, 397, 577, 846, 1206, 1550, 1745
FauI	CCCGC	3 cut(s)	124, 460, 816
FbaI	TGATCA	1 cut(s)	1372
Fnu4HI	GCNGC	4 cut(s)	134, 166, 185, 1461
FokI	GGATG	7 cut(s)	14, 60, 826, 839, 975, 1099, 1395
Fsp4HI	GCNGC	4 cut(s)	134, 166, 185, 1461
FspBI	CTAG	2 cut(s)	711, 1226
GlaI	GCGC	3 cut(s)	148, 753, 1126
GluI	GCNGC	4 cut(s)	134, 166, 185, 1461
GsaI	CCCAGC	1 cut(s)	1086
GsuI	CTGGAG	2 cut(s)	708, 1581
HaeIII	GGCC	4 cut(s)	356, 374, 570, 1584
HapII	CCGG	2 cut(s)	162, 376
HhaI	GCGC	3 cut(s)	149, 754, 1127
Hin1I	GRCGYC	1 cut(s)	432
Hin1II	CATG	7 cut(s)	298, 401, 581, 850, 1210, 1554, 1749
Hin6I	GCGC	3 cut(s)	147, 752, 1125
HinP1I	GCGC	3 cut(s)	147, 752, 1125
HindIII	AAGCTT	1 cut(s)	1677
HinfI	GANTC	6 cut(s)	314, 394, 705, 921, 1174, 1213
HpaII	CCGG	2 cut(s)	162, 376
HphI	GGTGA	4 cut(s)	85, 566, 962, 1382
Hpy166II	GTNNAC	5 cut(s)	636, 868, 1381, 1396, 1659
Hpy188I	TCNGA	5 cut(s)	242, 313, 696, 1434, 1507
Hpy188III	TCNNGA	4 cut(s)	626, 1412, 1598, 1688
Hpy8I	GTNNAC	5 cut(s)	636, 868, 1381, 1396, 1659
Hpy99I	CGWCG	1 cut(s)	437
HpyAV	CCTTC	9 cut(s)	270, 352, 364, 490, 581, 911, 982, 1525, 1595
HpyCH4III	ACNGT	4 cut(s)	66, 101, 872, 1472
HpyCH4IV	ACGT	2 cut(s)	87, 432
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1156
HpyF3I	CTNAG	6 cut(s)	180, 516, 1020, 1439, 1506, 1631
HpySE526I	ACGT	2 cut(s)	87, 432
Hsp92I	GRCGYC	1 cut(s)	432
Hsp92II	CATG	7 cut(s)	298, 401, 581, 850, 1210, 1554, 1749
HspAI	GCGC	3 cut(s)	147, 752, 1125
Ksp22I	TGATCA	1 cut(s)	1372
Kzo9I	GATC	6 cut(s)	1014, 1066, 1135, 1372, 1684, 1705
LguI	GCTCTTC	1 cut(s)	194
LmnI	GCTCC	3 cut(s)	401, 674, 1353
Lsp1109I	GCAGC	4 cut(s)	120, 171, 177, 1447
LweI	GCATC	5 cut(s)	38, 687, 804, 953, 1077
MaeI	CTAG	2 cut(s)	711, 1226
MaeII	ACGT	2 cut(s)	87, 432
MaeIII	GTNAC	5 cut(s)	428, 554, 968, 1404, 1553
MalI	GATC	6 cut(s)	1016, 1068, 1137, 1374, 1686, 1707
MboI	GATC	6 cut(s)	1014, 1066, 1135, 1372, 1684, 1705
MboII	GAAGA	5 cut(s)	181, 309, 391, 401, 601
MflI	RGATCY	1 cut(s)	1066
MhlI	GDGCHC	4 cut(s)	351, 667, 796, 1102
MlyI	GAGTC	1 cut(s)	930
MmeI	TCCRAC	5 cut(s)	85, 130, 276, 625, 1331
Mph1103I	ATGCAT	1 cut(s)	702
MroXI	GAANNNNTTC	1 cut(s)	393
MseI	TTAA	5 cut(s)	1032, 1044, 1320, 1452, 1623
MslI	CAYNNNNRTG	3 cut(s)	873, 1182, 1473
MspA1I	CMGCKG	1 cut(s)	184
MspI	CCGG	2 cut(s)	162, 376
MspR9I	CCNGG	7 cut(s)	376, 1038, 1061, 1130, 1347, 1481, 1586
Mva1269I	GAATGC	2 cut(s)	754, 1243
MvaI	CCWGG	6 cut(s)	1038, 1061, 1130, 1347, 1481, 1586
MvnI	CGCG	1 cut(s)	1125
MwoI	GCNNNNNNNGC	1 cut(s)	1156
NciI	CCSGG	1 cut(s)	376
NdeII	GATC	6 cut(s)	1014, 1066, 1135, 1372, 1684, 1705
NlaIII	CATG	7 cut(s)	298, 401, 581, 850, 1210, 1554, 1749
NlaIV	GGNNCC	3 cut(s)	310, 1058, 1154
NmuCI	GTSAC	4 cut(s)	428, 968, 1404, 1553
NsiI	ATGCAT	1 cut(s)	702
NspI	RCATGY	1 cut(s)	298
OliI	CACNNNNGTG	1 cut(s)	873
PaeI	GCATGC	1 cut(s)	298
PceI	AGGCCT	1 cut(s)	356
PciSI	GCTCTTC	1 cut(s)	194
PcsI	WCGNNNNNNNCGW	1 cut(s)	429
PctI	GAATGC	2 cut(s)	754, 1243
PdmI	GAANNNNTTC	1 cut(s)	393
PfeI	GAWTC	5 cut(s)	314, 394, 705, 1174, 1213
PflMI	CCANNNNNTGG	1 cut(s)	979
PfoI	TCCNGGA	1 cut(s)	1479
PkrI	GCNGC	4 cut(s)	135, 167, 186, 1462
Ple19I	CGATCG	1 cut(s)	1687
PleI	GAGTC	1 cut(s)	929
PpsI	GAGTC	1 cut(s)	929
PsiI	TTATAA	1 cut(s)	455
Psp6I	CCWGG	6 cut(s)	1036, 1059, 1128, 1345, 1479, 1584
PspFI	CCCAGC	1 cut(s)	1082
PspGI	CCWGG	6 cut(s)	1036, 1059, 1128, 1345, 1479, 1584
PspN4I	GGNNCC	3 cut(s)	310, 1058, 1154
PspPI	GGNCC	3 cut(s)	373, 568, 1152
PsuI	RGATCY	1 cut(s)	1066
PvuI	CGATCG	1 cut(s)	1687
PvuII	CAGCTG	1 cut(s)	184
RsaI	GTAC	4 cut(s)	422, 867, 1001, 1254
RsaNI	GTAC	4 cut(s)	421, 866, 1000, 1253
RseI	CAYNNNNRTG	3 cut(s)	873, 1182, 1473
SapI	GCTCTTC	1 cut(s)	194
SaqAI	TTAA	5 cut(s)	1032, 1044, 1320, 1452, 1623
SatI	GCNGC	4 cut(s)	134, 166, 185, 1461
Sau3AI	GATC	6 cut(s)	1014, 1066, 1135, 1372, 1684, 1705
Sau96I	GGNCC	3 cut(s)	373, 568, 1152
ScaI	AGTACT	1 cut(s)	1001
SchI	GAGTC	1 cut(s)	930
ScrFI	CCNGG	7 cut(s)	376, 1038, 1061, 1130, 1347, 1481, 1586
SduI	GDGCHC	4 cut(s)	351, 667, 796, 1102
SfaNI	GCATC	5 cut(s)	38, 687, 804, 953, 1077
SinI	GGWCC	1 cut(s)	1152
SmiMI	CAYNNNNRTG	3 cut(s)	873, 1182, 1473
SmlI	CTYRAG	1 cut(s)	350
SmoI	CTYRAG	1 cut(s)	350
SpeI	ACTAGT	1 cut(s)	710
SphI	GCATGC	1 cut(s)	298
SseBI	AGGCCT	1 cut(s)	356
SsiI	CCGC	5 cut(s)	117, 467, 817, 823, 1150
SspMI	CTAG	2 cut(s)	711, 1226
StuI	AGGCCT	1 cut(s)	356
StyD4I	CCNGG	7 cut(s)	374, 1036, 1059, 1128, 1345, 1479, 1584
StyI	CCWWGG	1 cut(s)	973
TaaI	ACNGT	4 cut(s)	66, 101, 872, 1472
TaiI	ACGT	2 cut(s)	90, 435
TaqI	TCGA	5 cut(s)	1092, 1235, 1456, 1683, 1687
TatI	WGTACW	3 cut(s)	865, 999, 1252
TfiI	GAWTC	5 cut(s)	314, 394, 705, 1174, 1213
Tru1I	TTAA	5 cut(s)	1032, 1044, 1320, 1452, 1623
Tru9I	TTAA	5 cut(s)	1032, 1044, 1320, 1452, 1623
TseFI	GTSAC	4 cut(s)	428, 968, 1404, 1553
TseI	GCWGC	4 cut(s)	133, 165, 184, 1460
Tsp45I	GTSAC	4 cut(s)	428, 968, 1404, 1553
TspDTI	ATGAA	8 cut(s)	291, 386, 1166, 1437, 1507, 1539, 1709, 1734
TspGWI	ACGGA	1 cut(s)	145
Van91I	CCANNNNNTGG	1 cut(s)	979
VpaK11BI	GGWCC	1 cut(s)	1152
XapI	RAATTY	5 cut(s)	229, 538, 616, 1385, 1425
XceI	RCATGY	1 cut(s)	298
XmnI	GAANNNNTTC	1 cut(s)	393
XspI	CTAG	2 cut(s)	711, 1226
ZraI	GACGTC	1 cut(s)	433
ZrmI	AGTACT	1 cut(s)	1001
Zsp2I	ATGCAT	1 cut(s)	702

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.