Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0014411

Physical Location & Seq

Genomic Coordinates Reverse (-)

20538928 .. 20541680

Gene Structure 2753 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g18380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGCTGACCATGATTACGATGAATCCCATGTTGTCCAACGCCAGCAACACTACACAGGCAAGAAGAAAATGCAGTGTTTACCTAACAAAACGGCCGTACGTACGTTCTACTAAAACATTAAACAATTTCATCCCAAACCCAAAATTACTCAAATGTGCCGAACTTCAAAAACCAAAGCCATCCTATCCTTGTTGCAAGGATGCAACAGCTTCCAACGGCTCAAAAAAATCCACGCCCACGTCATCACCAACGGTCTCCAACCCCACCCCGCCATTTCAAACAAGCTGCTCAACTTCTGCGCCGTCTCCGTCTCCGGCAGCTTGCCCTACGCTCAGCTGCTCTTCCACCACCACCTCCAAAACCCACAAACCCAAGACTGGAATTCCCTCATCAGAGGCTTTTCCAACAGCCCTTCTCCTCTCCAAGCCATTTTTTACTACAATCGCCTGCGAGAAACTGAAGGCCCGGAAGAAGTGTGAAGAGATTCATGGAGCTGTGGTAAGATTTGGGTACGAGAGTGACGTCGTTGTTTGCACCAATCTTATGAGGTCGTATGCGGGAGATGGGTTGATTGAGAGTGCAGAGAAGGTGTTTGATAATATGCCTGAGAGAGACTTGGTGTCTTGGAATTCTATGATTTCGTGTTACTCTCAAAAGGGCCTTCACCATGAGGCGTTGAAGATGTATAATGTGATGAGGAATGAGAATGTGGGTCTTGATGGGTTTACGTTTGTTGGGTTGCTTTCATCTTGTGCTCACTTGGGAGCATTGAATACTGGAGTTCAGATGCATAGAATCGCTAGTGAAAAGGGGCTTCTGGGGAATGTTTATGTTGGGAATGCGCTTATTGATATGTATGCTAAATGTGGTAATTTGGATAGTTCTCGTAGTGTGTTTGAGAGGATGCGGAAGCGGGATGTTTTTACTTGGAACTCCATGATTGTTGGGTATGGAGTCCACGGTTGTGGGGATGAAGCAATCTCATTTTTTGGGCGTATGCTGGTGGAAGGAGTCCAGCCGAACTCCATCACATTTCTTGGTTTGTTATGTGGATGCAGTCACCAAGGCTTGGTAGAGAAGGGTGTTGAGTACTTCAATGTGATGATCTCTAAGTTCAATGTTAAGCCTGGAATTAAGCATTACGGGTGCCTGGTGGATCTGTTTGGCAGAGCTGGGATGCTCGAAAAGGCACTTCAAGTTATTAGGACTTCACACGCCCAGGACGATCCAGTCCTTTGGCGGACCCTGCTTGGCTCTTGCAAGATTCATAAGAATGTGGAAATAGGGGAAATTTCCATGAGGAATCTAATCCAGCTAGGGTCATCGAATGCAGGGGACTACGTACTTCTTGCTACAATCTATTCAAAAGAGAAAAATGCAGATGGTGTTGCAAAGATGAGAAAGTTGATTAAAACCGAGGGAGTAAAGACAACTCCAGGTTGGAGCTGGATTGAAATTGGTGATCAGGTTCACAAATTTGTTGTGGACGACAAGTCACATCCTGACACTAATGAAATTTATTGGAAACTGAGAGCAGTTGTTCATCGAGCTGCTCTGCACGGTTATGTGCAGGGGAAACCTCTTATCACAACTTCTGAGTTTCCCTTCATAGACACAGATTGTTTAGGAACTTCTGCTTCATGTCACAGTGAGAAGCTGGCAATCGCTTTTGGCCTGGCACGAACTCCAGAAGGAACGGCTTTACGAATAGTTAAGAACCTGAGAGTTTGTAGAGATTGCCATTCGTTTACAAAGTTTGTTTCACAAGCTTTCGATCGAGAAATAATTGTTAGGGATCGTGTTCGGTTTCATCACTTCAAGGATGGATTATGTTCATGTAAAGATTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

618

Amino Acids

68.21

Weight (kDa)

9.12

Isoelectric Point (pI)

36.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	205 - 253	2.5e-10	PPR repeat family
PPR	PF01535	207 - 237	3.1e-08	PPR repeat
PPR_2	PF13041	305 - 353	2e-10	PPR repeat family
PPR	PF01535	308 - 338	1.7e-07	PPR repeat
E_motif	PF20431	423 - 485	1.8e-15	E motif
DYW_deaminase	PF14432	548 - 617	4e-34	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014411)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56550 AT3G56550
fragaria_vesca	FvH4_6g08690
malus_domestica	MD04G1184300.v1.1 MD12G1197500.v1.1
prunus_persica	Prupe.6G302800_v2.0.a1
pyrus_communis	pycom04g16330 pycom12g18380
rosa_chinensis	RchiOBHm_Chr3g0458831
rosa_laevigata	RLG00000025132
rosa_multiflora	Rmu_co8385739.1_g000001
rosa_roxburghii	Rroxscaffold_6G00420760
rosa_rugosa	Rorug03G0032200
rosa_samantha	Rh3BG092700 Rh3CG093000 Rh3DG093700
rosa_wichuraiana	Rw3G007690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1229
AatII	GACGTC	1 cut(s)	525
AccB1I	GGYRCC	1 cut(s)	1146
AccB7I	CCANNNNNTGG	1 cut(s)	1069
AciI	CCGC	5 cut(s)	269, 557, 907, 913, 1240
AclWI	GGATC	3 cut(s)	1164, 1220, 1803
AcoI	YGGCCR	1 cut(s)	92
AcsI	RAATTY	5 cut(s)	381, 628, 1290, 1475, 1515
AcuI	CTGAAG	1 cut(s)	479
AcyI	GRCGYC	1 cut(s)	522
AfaI	GTAC	5 cut(s)	98, 102, 512, 1091, 1344
AfiI	CCNNNNNNNGG	2 cut(s)	377, 1069
AhdI	GACNNNNNGTC	2 cut(s)	619, 1492
AjiI	CACGTC	1 cut(s)	240
AjnI	CCWGG	5 cut(s)	1126, 1149, 1218, 1435, 1674
AleI	CACNNNNGTG	1 cut(s)	963
Alw21I	GWGCWC	1 cut(s)	757
Alw26I	GTCTC	4 cut(s)	259, 309, 315, 606
AlwI	GGATC	3 cut(s)	1164, 1220, 1803
AoxI	GGCC	4 cut(s)	92, 462, 658, 1672
ApeKI	GCWGC	4 cut(s)	285, 317, 336, 1550
ApoI	RAATTY	5 cut(s)	381, 628, 1290, 1475, 1515
Asp700I	GAANNNNTTC	1 cut(s)	483
AspLEI	GCGC	2 cut(s)	301, 844
AspS9I	GGNCC	3 cut(s)	463, 658, 1242
AsuC2I	CCSGG	1 cut(s)	466
AsuHPI	GGTGA	4 cut(s)	237, 656, 1052, 1472
AvaII	GGWCC	1 cut(s)	1242
BaeI	ACNNNNGTAYC	2 cut(s)	502, 535
BanI	GGYRCC	1 cut(s)	1146
Bbv12I	GWGCWC	1 cut(s)	757
BbvI	GCAGC	4 cut(s)	272, 323, 329, 1537
BccI	CCATC	6 cut(s)	187, 557, 713, 1034, 1376, 1817
BceAI	ACGGC	5 cut(s)	79, 107, 232, 286, 1713
BciT130I	CCWGG	5 cut(s)	1128, 1151, 1220, 1437, 1676
BclI	TGATCA	1 cut(s)	1462
BcnI	CCSGG	1 cut(s)	466
BcoDI	GTCTC	4 cut(s)	259, 309, 315, 606
BfaI	CTAG	2 cut(s)	801, 1316
BisI	GCNGC	4 cut(s)	286, 318, 337, 1551
BlpI	GCTNAGC	1 cut(s)	332
BlsI	GCNGC	4 cut(s)	287, 319, 338, 1552
BmcAI	AGTACT	1 cut(s)	1091
Bme1390I	CCNGG	6 cut(s)	466, 1128, 1151, 1220, 1437, 1676
Bme18I	GGWCC	1 cut(s)	1242
BmeRI	GACNNNNNGTC	2 cut(s)	619, 1492
BmgBI	CACGTC	1 cut(s)	240
BmgT120I	GGNCC	3 cut(s)	463, 658, 1242
BmiI	GGNNCC	2 cut(s)	1148, 1244
BmrFI	CCNGG	6 cut(s)	466, 1128, 1151, 1220, 1437, 1676
BmsI	GCATC	5 cut(s)	190, 777, 894, 1043, 1167
BpmI	CTGGAG	3 cut(s)	798, 1419, 1671
Bpu1102I	GCTNAGC	1 cut(s)	332
BpuMI	CCSGG	1 cut(s)	466
BsaAI	YACGTR	2 cut(s)	100, 1342
BsaHI	GRCGYC	1 cut(s)	522
BsaI	GGTCTC	1 cut(s)	259
BsaJI	CCNNGG	4 cut(s)	958, 1063, 1218, 1416
BsaXI	ACNNNNNCTCC	2 cut(s)	483, 513
Bsc4I	CCNNNNNNNGG	2 cut(s)	377, 1069
Bse1I	ACTGG	3 cut(s)	382, 781, 1229
BseBI	CCWGG	5 cut(s)	1128, 1151, 1220, 1437, 1676
BseDI	CCNNGG	4 cut(s)	958, 1063, 1218, 1416
BseLI	CCNNNNNNNGG	2 cut(s)	377, 1069
BseMII	CTCAG	5 cut(s)	346, 597, 1520, 1587, 1712
BseNI	ACTGG	3 cut(s)	382, 781, 1229
BseRI	GAGGAG	1 cut(s)	407
BseX3I	CGGCCG	1 cut(s)	92
BseXI	GCAGC	4 cut(s)	272, 323, 329, 1537
BseYI	CCCAGC	1 cut(s)	1172
BsgI	GTGCAG	3 cut(s)	600, 1541, 1589
Bsh1285I	CGRYCG	2 cut(s)	95, 1777
BshFI	GGCC	4 cut(s)	94, 464, 660, 1674
BshNI	GGYRCC	1 cut(s)	1146
BsiEI	CGRYCG	2 cut(s)	95, 1777
BsiHKAI	GWGCWC	1 cut(s)	757
BsiSI	CCGG	2 cut(s)	314, 466
BsiWI	CGTACG	2 cut(s)	96, 100
BslFI	GGGAC	1 cut(s)	1349
BslI	CCNNNNNNNGG	2 cut(s)	377, 1069
BsmAI	GTCTC	4 cut(s)	259, 309, 315, 606
BsmBI	CGTCTC	2 cut(s)	309, 315
BsmFI	GGGAC	1 cut(s)	1349
BsmI	GAATGC	2 cut(s)	844, 1333
BsnI	GGCC	4 cut(s)	94, 464, 660, 1674
Bso31I	GGTCTC	1 cut(s)	259
Bsp1286I	GDGCHC	1 cut(s)	757
Bsp143I	GATC	6 cut(s)	1104, 1156, 1225, 1462, 1774, 1795
Bsp1720I	GCTNAGC	1 cut(s)	332
BspACI	CCGC	5 cut(s)	269, 557, 907, 913, 1240
BspANI	GGCC	4 cut(s)	94, 464, 660, 1674
BspCNI	CTCAG	5 cut(s)	345, 598, 1521, 1588, 1713
BspLI	GGNNCC	2 cut(s)	1148, 1244
BspPI	GGATC	3 cut(s)	1164, 1220, 1803
BspQI	GCTCTTC	1 cut(s)	346
BspT107I	GGYRCC	1 cut(s)	1146
BspTNI	GGTCTC	1 cut(s)	259
BsrI	ACTGG	3 cut(s)	382, 781, 1229
BssECI	CCNNGG	4 cut(s)	958, 1063, 1218, 1416
BssMI	GATC	6 cut(s)	1104, 1156, 1225, 1462, 1774, 1795
BssNI	GRCGYC	1 cut(s)	522
BssT1I	CCWWGG	1 cut(s)	1063
Bst2UI	CCWGG	5 cut(s)	1128, 1151, 1220, 1437, 1676
Bst4CI	ACNGT	4 cut(s)	253, 962, 1562, 1649
Bst6I	CTCTTC	2 cut(s)	346, 474
BstACI	GRCGYC	1 cut(s)	522
BstBAI	YACGTR	2 cut(s)	100, 1342
BstC8I	GCNNGC	4 cut(s)	43, 322, 448, 1659
BstDEI	CTNAG	6 cut(s)	332, 606, 1110, 1529, 1596, 1721
BstDSI	CCRYGG	1 cut(s)	958
BstHHI	GCGC	2 cut(s)	301, 844
BstKTI	GATC	6 cut(s)	1107, 1159, 1228, 1465, 1777, 1798
BstMAI	GTCTC	4 cut(s)	259, 309, 315, 606
BstMBI	GATC	6 cut(s)	1104, 1156, 1225, 1462, 1774, 1795
BstMCI	CGRYCG	2 cut(s)	95, 1777
BstMWI	GCNNNNNNNGC	1 cut(s)	1246
BstNI	CCWGG	5 cut(s)	1128, 1151, 1220, 1437, 1676
BstSCI	CCNGG	6 cut(s)	464, 1126, 1149, 1218, 1435, 1674
BstSNI	TACGTA	2 cut(s)	100, 1342
BstV1I	GCAGC	4 cut(s)	272, 323, 329, 1537
BstX2I	RGATCY	1 cut(s)	1156
BstXI	CCANNNNNNTGG	2 cut(s)	965, 1236
BstYI	RGATCY	1 cut(s)	1156
BstZI	CGGCCG	1 cut(s)	92
BsuRI	GGCC	4 cut(s)	94, 464, 660, 1674
BtgI	CCRYGG	1 cut(s)	958
BtrI	CACGTC	1 cut(s)	240
BtsI	GCAGTG	1 cut(s)	79
BtsIMutI	CAGTG	2 cut(s)	79, 1654
Cac8I	GCNNGC	4 cut(s)	43, 322, 448, 1659
CfoI	GCGC	2 cut(s)	301, 844
Cfr13I	GGNCC	3 cut(s)	463, 658, 1242
Csp6I	GTAC	5 cut(s)	97, 101, 511, 1090, 1343
CviAII	CATG	8 cut(s)	10, 28, 488, 668, 937, 1297, 1641, 1836
CviQI	GTAC	5 cut(s)	97, 101, 511, 1090, 1343
DdeI	CTNAG	6 cut(s)	332, 606, 1110, 1529, 1596, 1721
DpnI	GATC	6 cut(s)	1106, 1158, 1227, 1464, 1776, 1797
DpnII	GATC	6 cut(s)	1104, 1156, 1225, 1462, 1774, 1795
DrdI	GACNNNNNNGTC	1 cut(s)	1229
DriI	GACNNNNNGTC	2 cut(s)	619, 1492
DseDI	GACNNNNNNGTC	1 cut(s)	1229
EaeI	YGGCCR	1 cut(s)	92
EagI	CGGCCG	1 cut(s)	92
Eam1104I	CTCTTC	2 cut(s)	346, 474
Eam1105I	GACNNNNNGTC	2 cut(s)	619, 1492
EarI	CTCTTC	2 cut(s)	346, 474
EciI	GGCGGA	1 cut(s)	1255
EclXI	CGGCCG	1 cut(s)	92
Eco105I	TACGTA	2 cut(s)	100, 1342
Eco130I	CCWWGG	1 cut(s)	1063
Eco31I	GGTCTC	1 cut(s)	259
Eco47I	GGWCC	1 cut(s)	1242
Eco52I	CGGCCG	1 cut(s)	92
Eco57I	CTGAAG	1 cut(s)	479
EcoO109I	RGGNCCY	1 cut(s)	658
EcoRI	GAATTC	2 cut(s)	381, 628
EcoRII	CCWGG	5 cut(s)	1126, 1149, 1218, 1435, 1674
EcoT14I	CCWWGG	1 cut(s)	1063
EcoT22I	ATGCAT	1 cut(s)	792
ErhI	CCWWGG	1 cut(s)	1063
Esp3I	CGTCTC	2 cut(s)	309, 315
FaeI	CATG	8 cut(s)	13, 31, 491, 671, 940, 1300, 1644, 1839
FaqI	GGGAC	1 cut(s)	1349
FatI	CATG	8 cut(s)	9, 27, 487, 667, 936, 1296, 1640, 1835
FauI	CCCGC	3 cut(s)	276, 550, 906
FbaI	TGATCA	1 cut(s)	1462
Fnu4HI	GCNGC	4 cut(s)	286, 318, 337, 1551
Fsp4HI	GCNGC	4 cut(s)	286, 318, 337, 1551
FspBI	CTAG	2 cut(s)	801, 1316
GlaI	GCGC	2 cut(s)	300, 843
GluI	GCNGC	4 cut(s)	286, 318, 337, 1551
GsaI	CCCAGC	1 cut(s)	1176
GsuI	CTGGAG	3 cut(s)	798, 1419, 1671
HaeIII	GGCC	4 cut(s)	94, 464, 660, 1674
HapII	CCGG	2 cut(s)	314, 466
HhaI	GCGC	2 cut(s)	301, 844
Hin1I	GRCGYC	1 cut(s)	522
Hin1II	CATG	8 cut(s)	13, 31, 491, 671, 940, 1300, 1644, 1839
Hin6I	GCGC	2 cut(s)	299, 842
HinP1I	GCGC	2 cut(s)	299, 842
HindIII	AAGCTT	1 cut(s)	1767
HinfI	GANTC	7 cut(s)	22, 484, 795, 954, 1011, 1264, 1303
HpaII	CCGG	2 cut(s)	314, 466
HphI	GGTGA	4 cut(s)	237, 656, 1052, 1472
Hpy166II	GTNNAC	6 cut(s)	79, 726, 958, 1471, 1486, 1749
Hpy188I	TCNGA	3 cut(s)	394, 786, 1597
Hpy188III	TCNNGA	4 cut(s)	716, 1502, 1688, 1778
Hpy8I	GTNNAC	6 cut(s)	79, 726, 958, 1471, 1486, 1749
Hpy99I	CGWCG	1 cut(s)	527
HpyAV	CCTTC	8 cut(s)	422, 454, 580, 671, 1001, 1072, 1615, 1685
HpyCH4III	ACNGT	4 cut(s)	253, 962, 1562, 1649
HpyCH4IV	ACGT	6 cut(s)	99, 103, 239, 522, 728, 1341
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1246
HpyF3I	CTNAG	6 cut(s)	332, 606, 1110, 1529, 1596, 1721
HpySE526I	ACGT	6 cut(s)	99, 103, 239, 522, 728, 1341
Hsp92I	GRCGYC	1 cut(s)	522
Hsp92II	CATG	8 cut(s)	13, 31, 491, 671, 940, 1300, 1644, 1839
HspAI	GCGC	2 cut(s)	299, 842
Ksp22I	TGATCA	1 cut(s)	1462
Kzo9I	GATC	6 cut(s)	1104, 1156, 1225, 1462, 1774, 1795
LguI	GCTCTTC	1 cut(s)	346
LmnI	GCTCC	3 cut(s)	491, 764, 1443
Lsp1109I	GCAGC	4 cut(s)	272, 323, 329, 1537
LweI	GCATC	5 cut(s)	190, 777, 894, 1043, 1167
MaeI	CTAG	2 cut(s)	801, 1316
MaeII	ACGT	6 cut(s)	99, 103, 239, 522, 728, 1341
MaeIII	GTNAC	5 cut(s)	518, 644, 1058, 1494, 1643
MalI	GATC	6 cut(s)	1106, 1158, 1227, 1464, 1776, 1797
MboI	GATC	6 cut(s)	1104, 1156, 1225, 1462, 1774, 1795
MboII	GAAGA	5 cut(s)	75, 333, 481, 491, 691
MflI	RGATCY	1 cut(s)	1156
MhlI	GDGCHC	1 cut(s)	757
MlyI	GAGTC	2 cut(s)	963, 1020
MmeI	TCCRAC	5 cut(s)	60, 237, 282, 428, 1421
Mph1103I	ATGCAT	1 cut(s)	792
MroXI	GAANNNNTTC	1 cut(s)	483
MseI	TTAA	5 cut(s)	119, 1122, 1134, 1410, 1713
MslI	CAYNNNNRTG	3 cut(s)	963, 1272, 1563
MspA1I	CMGCKG	1 cut(s)	336
MspI	CCGG	2 cut(s)	314, 466
MspR9I	CCNGG	6 cut(s)	466, 1128, 1151, 1220, 1437, 1676
Mva1269I	GAATGC	2 cut(s)	844, 1333
MvaI	CCWGG	5 cut(s)	1128, 1151, 1220, 1437, 1676
MwoI	GCNNNNNNNGC	1 cut(s)	1246
NciI	CCSGG	1 cut(s)	466
NdeII	GATC	6 cut(s)	1104, 1156, 1225, 1462, 1774, 1795
NlaIII	CATG	8 cut(s)	13, 31, 491, 671, 940, 1300, 1644, 1839
NlaIV	GGNNCC	2 cut(s)	1148, 1244
NmuCI	GTSAC	4 cut(s)	518, 1058, 1494, 1643
NsiI	ATGCAT	1 cut(s)	792
OliI	CACNNNNGTG	1 cut(s)	963
PciSI	GCTCTTC	1 cut(s)	346
PcsI	WCGNNNNNNNCGW	2 cut(s)	519, 1221
PctI	GAATGC	2 cut(s)	844, 1333
PdmI	GAANNNNTTC	1 cut(s)	483
PfeI	GAWTC	5 cut(s)	22, 484, 795, 1264, 1303
Pfl23II	CGTACG	2 cut(s)	96, 100
PflMI	CCANNNNNTGG	1 cut(s)	1069
PkrI	GCNGC	4 cut(s)	287, 319, 338, 1552
Ple19I	CGATCG	1 cut(s)	1777
PleI	GAGTC	2 cut(s)	962, 1019
PpsI	GAGTC	2 cut(s)	962, 1019
Ppu21I	YACGTR	2 cut(s)	100, 1342
Psp6I	CCWGG	5 cut(s)	1126, 1149, 1218, 1435, 1674
PspFI	CCCAGC	1 cut(s)	1172
PspGI	CCWGG	5 cut(s)	1126, 1149, 1218, 1435, 1674
PspLI	CGTACG	2 cut(s)	96, 100
PspN4I	GGNNCC	2 cut(s)	1148, 1244
PspPI	GGNCC	3 cut(s)	463, 658, 1242
PsuI	RGATCY	1 cut(s)	1156
PvuI	CGATCG	1 cut(s)	1777
PvuII	CAGCTG	1 cut(s)	336
RsaI	GTAC	5 cut(s)	98, 102, 512, 1091, 1344
RsaNI	GTAC	5 cut(s)	97, 101, 511, 1090, 1343
RseI	CAYNNNNRTG	3 cut(s)	963, 1272, 1563
SapI	GCTCTTC	1 cut(s)	346
SaqAI	TTAA	5 cut(s)	119, 1122, 1134, 1410, 1713
SatI	GCNGC	4 cut(s)	286, 318, 337, 1551
Sau3AI	GATC	6 cut(s)	1104, 1156, 1225, 1462, 1774, 1795
Sau96I	GGNCC	3 cut(s)	463, 658, 1242
ScaI	AGTACT	1 cut(s)	1091
SchI	GAGTC	2 cut(s)	963, 1020
ScrFI	CCNGG	6 cut(s)	466, 1128, 1151, 1220, 1437, 1676
SduI	GDGCHC	1 cut(s)	757
SfaNI	GCATC	5 cut(s)	190, 777, 894, 1043, 1167
SinI	GGWCC	1 cut(s)	1242
SmiMI	CAYNNNNRTG	3 cut(s)	963, 1272, 1563
SnaBI	TACGTA	2 cut(s)	100, 1342
SsiI	CCGC	5 cut(s)	269, 557, 907, 913, 1240
SspMI	CTAG	2 cut(s)	801, 1316
StyD4I	CCNGG	6 cut(s)	464, 1126, 1149, 1218, 1435, 1674
StyI	CCWWGG	1 cut(s)	1063
TaaI	ACNGT	4 cut(s)	253, 962, 1562, 1649
TaiI	ACGT	6 cut(s)	102, 106, 242, 525, 731, 1344
TaqI	TCGA	5 cut(s)	1182, 1325, 1546, 1773, 1777
TatI	WGTACW	1 cut(s)	1089
TfiI	GAWTC	5 cut(s)	22, 484, 795, 1264, 1303
Tru1I	TTAA	5 cut(s)	119, 1122, 1134, 1410, 1713
Tru9I	TTAA	5 cut(s)	119, 1122, 1134, 1410, 1713
TscAI	CASTG	2 cut(s)	79, 1654
TseFI	GTSAC	4 cut(s)	518, 1058, 1494, 1643
TseI	GCWGC	4 cut(s)	285, 317, 336, 1550
Tsp45I	GTSAC	4 cut(s)	518, 1058, 1494, 1643
TspGWI	ACGGA	1 cut(s)	297
TspRI	CASTG	2 cut(s)	79, 1654
Van91I	CCANNNNNTGG	1 cut(s)	1069
VpaK11BI	GGWCC	1 cut(s)	1242
XapI	RAATTY	5 cut(s)	381, 628, 1290, 1475, 1515
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1443
XmnI	GAANNNNTTC	1 cut(s)	483
XspI	CTAG	2 cut(s)	801, 1316
ZraI	GACGTC	1 cut(s)	523
ZrmI	AGTACT	1 cut(s)	1091
Zsp2I	ATGCAT	1 cut(s)	792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.