Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G56550 AT3G56550 |
| fragaria_vesca | FvH4_6g08690 |
| malus_domestica | MD04G1184300.v1.1 MD12G1197500.v1.1 |
| prunus_persica | Prupe.6G302800_v2.0.a1 |
| pyrus_communis | pycom04g16330 pycom12g18380 |
| rosa_chinensis | RchiOBHm_Chr3g0458831 |
| rosa_laevigata | RLG00000025132 |
| rosa_multiflora | Rmu_co8385739.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00420760 |
| rosa_rugosa | Rorug03G0032200 |
| rosa_samantha | Rh3BG092700 Rh3CG093000 Rh3DG093700 |
| rosa_wichuraiana | Rw3G007690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 150 |
| AcoI | YGGCCR | 1 cut(s) | 77 |
| AfaI | GTAC | 1 cut(s) | 45 |
| AflIII | ACRYGT | 1 cut(s) | 176 |
| AluBI | AGCT | 1 cut(s) | 32 |
| AluI | AGCT | 1 cut(s) | 32 |
| AoxI | GGCC | 2 cut(s) | 21, 77 |
| ApeKI | GCWGC | 1 cut(s) | 98 |
| BalI | TGGCCA | 1 cut(s) | 79 |
| BbvI | GCAGC | 1 cut(s) | 85 |
| BccI | CCATC | 1 cut(s) | 189 |
| BisI | GCNGC | 1 cut(s) | 99 |
| BlsI | GCNGC | 1 cut(s) | 100 |
| BpmI | CTGGAG | 1 cut(s) | 139 |
| BsaJI | CCNNGG | 1 cut(s) | 18 |
| Bse1I | ACTGG | 3 cut(s) | 80, 156, 196 |
| BseDI | CCNNGG | 1 cut(s) | 18 |
| BseGI | GGATG | 1 cut(s) | 200 |
| BseNI | ACTGG | 3 cut(s) | 80, 156, 196 |
| BseXI | GCAGC | 1 cut(s) | 85 |
| BshFI | GGCC | 2 cut(s) | 23, 79 |
| BsnI | GGCC | 2 cut(s) | 23, 79 |
| Bsp19I | CCATGG | 1 cut(s) | 18 |
| BspANI | GGCC | 2 cut(s) | 23, 79 |
| BsrI | ACTGG | 3 cut(s) | 80, 156, 196 |
| BssECI | CCNNGG | 1 cut(s) | 18 |
| BssT1I | CCWWGG | 1 cut(s) | 18 |
| Bst4CI | ACNGT | 1 cut(s) | 37 |
| Bst6I | CTCTTC | 1 cut(s) | 127 |
| BstDSI | CCRYGG | 1 cut(s) | 18 |
| BstF5I | GGATG | 1 cut(s) | 200 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 29, 65 |
| BstNSI | RCATGY | 2 cut(s) | 144, 180 |
| BstV1I | GCAGC | 1 cut(s) | 85 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 19 |
| BsuRI | GGCC | 2 cut(s) | 23, 79 |
| BtgI | CCRYGG | 1 cut(s) | 18 |
| BtsCI | GGATG | 1 cut(s) | 200 |
| BtsIMutI | CAGTG | 1 cut(s) | 163 |
| Csp6I | GTAC | 1 cut(s) | 44 |
| CviAII | CATG | 4 cut(s) | 19, 141, 177, 204 |
| CviJI | RGCY | 6 cut(s) | 5, 23, 32, 59, 79, 163 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 23, 32, 59, 79, 163 |
| CviQI | GTAC | 1 cut(s) | 44 |
| EaeI | YGGCCR | 1 cut(s) | 77 |
| Eam1104I | CTCTTC | 1 cut(s) | 127 |
| EarI | CTCTTC | 1 cut(s) | 127 |
| Eco130I | CCWWGG | 1 cut(s) | 18 |
| EcoT14I | CCWWGG | 1 cut(s) | 18 |
| ErhI | CCWWGG | 1 cut(s) | 18 |
| FaeI | CATG | 4 cut(s) | 22, 144, 180, 207 |
| FaiI | YATR | 9 cut(s) | 20, 56, 86, 112, 142, 150, 174, 178, 205 |
| FatI | CATG | 4 cut(s) | 18, 140, 176, 203 |
| Fnu4HI | GCNGC | 1 cut(s) | 99 |
| FokI | GGATG | 1 cut(s) | 207 |
| Fsp4HI | GCNGC | 1 cut(s) | 99 |
| GluI | GCNGC | 1 cut(s) | 99 |
| GsuI | CTGGAG | 1 cut(s) | 139 |
| HaeIII | GGCC | 2 cut(s) | 23, 79 |
| Hin1II | CATG | 4 cut(s) | 22, 144, 180, 207 |
| Hpy166II | GTNNAC | 1 cut(s) | 73 |
| Hpy8I | GTNNAC | 1 cut(s) | 73 |
| HpyCH4III | ACNGT | 1 cut(s) | 37 |
| HpyCH4V | TGCA | 2 cut(s) | 101, 144 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 29, 65 |
| Hsp92II | CATG | 4 cut(s) | 22, 144, 180, 207 |
| LpnPI | CCDG | 4 cut(s) | 61, 93, 169, 177 |
| Lsp1109I | GCAGC | 1 cut(s) | 85 |
| MboII | GAAGA | 1 cut(s) | 144 |
| MlsI | TGGCCA | 1 cut(s) | 79 |
| MluCI | AATT | 1 cut(s) | 145 |
| MluNI | TGGCCA | 1 cut(s) | 79 |
| MmeI | TCCRAC | 1 cut(s) | 36 |
| MnlI | CCTC | 1 cut(s) | 128 |
| Mox20I | TGGCCA | 1 cut(s) | 79 |
| MscI | TGGCCA | 1 cut(s) | 79 |
| MslI | CAYNNNNRTG | 2 cut(s) | 181, 208 |
| Msp20I | TGGCCA | 1 cut(s) | 79 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 29, 65 |
| NcoI | CCATGG | 1 cut(s) | 18 |
| NlaIII | CATG | 4 cut(s) | 22, 144, 180, 207 |
| NspI | RCATGY | 2 cut(s) | 144, 180 |
| PciI | ACATGT | 1 cut(s) | 176 |
| PkrI | GCNGC | 1 cut(s) | 100 |
| PscI | ACATGT | 1 cut(s) | 176 |
| PsiI | TTATAA | 1 cut(s) | 150 |
| RsaI | GTAC | 1 cut(s) | 45 |
| RsaNI | GTAC | 1 cut(s) | 44 |
| RseI | CAYNNNNRTG | 2 cut(s) | 181, 208 |
| SatI | GCNGC | 1 cut(s) | 99 |
| SetI | ASST | 2 cut(s) | 34, 55 |
| SgeI | CNNG | 8 cut(s) | 31, 53, 88, 92, 153, 168, 189, 204 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 181, 208 |
| Sse9I | AATT | 1 cut(s) | 145 |
| StyI | CCWWGG | 1 cut(s) | 18 |
| TaaI | ACNGT | 1 cut(s) | 37 |
| TasI | AATT | 1 cut(s) | 145 |
| TatI | WGTACW | 1 cut(s) | 43 |
| TscAI | CASTG | 1 cut(s) | 163 |
| TseI | GCWGC | 1 cut(s) | 98 |
| TspRI | CASTG | 1 cut(s) | 163 |
| XceI | RCATGY | 2 cut(s) | 144, 180 |