Protein AUXIN RESPONSE
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G54990 |
| fragaria_vesca | FvH4_6g06010 |
| malus_domestica | MD04G1204900.v1.1 MD12G1218600.v1.1 |
| prunus_persica | Prupe.6G324900_v2.0.a1 |
| pyrus_communis | pycom04g18110 pycom12g20410 |
| rosa_chinensis | RchiOBHm_Chr3g0454971 |
| rosa_laevigata | RLG00000025397 |
| rosa_multiflora | Rmu_sc0002169.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00424640 |
| rosa_rugosa | Rorug03G0003400 Rorug03G0003500 Rorug03G0003500 Rorug03G0003600 |
| rosa_samantha | Rh3AG063200 Rh3BG065200 Rh3CG064000 Rh3DG065200 |
| rosa_wichuraiana | Rw3G004960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1237 |
| Acc36I | ACCTGC | 1 cut(s) | 1237 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1278, 1588 |
| AccBSI | CCGCTC | 1 cut(s) | 407 |
| AclWI | GGATC | 3 cut(s) | 514, 955, 1441 |
| AcoI | YGGCCR | 1 cut(s) | 1573 |
| AcsI | RAATTY | 2 cut(s) | 572, 705 |
| AfaI | GTAC | 3 cut(s) | 447, 487, 1565 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 623, 624, 1167, 1278, 1347, 1588 |
| AgsI | TTSAA | 9 cut(s) | 94, 124, 135, 476, 818, 1138, 1186, 1231, 1436 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 379 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 235, 267 |
| AleI | CACNNNNGTG | 1 cut(s) | 174 |
| Alw21I | GWGCWC | 1 cut(s) | 1312 |
| Alw26I | GTCTC | 2 cut(s) | 328, 857 |
| Alw44I | GTGCAC | 1 cut(s) | 1308 |
| AlwI | GGATC | 3 cut(s) | 514, 955, 1441 |
| Ama87I | CYCGRG | 2 cut(s) | 783, 1451 |
| AoxI | GGCC | 4 cut(s) | 163, 1158, 1352, 1573 |
| ApaLI | GTGCAC | 1 cut(s) | 1308 |
| ApeKI | GCWGC | 2 cut(s) | 1367, 1488 |
| ApoI | RAATTY | 2 cut(s) | 572, 705 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 194, 226, 982, 1014 |
| AspS9I | GGNCC | 4 cut(s) | 582, 824, 1158, 1269 |
| AsuC2I | CCSGG | 2 cut(s) | 470, 618 |
| AsuII | TTCGAA | 3 cut(s) | 98, 559, 791 |
| AvaI | CYCGRG | 2 cut(s) | 783, 1451 |
| AvaII | GGWCC | 3 cut(s) | 582, 824, 1269 |
| AxyI | CCTNAGG | 2 cut(s) | 828, 1356 |
| BaeGI | GKGCMC | 1 cut(s) | 1312 |
| BalI | TGGCCA | 1 cut(s) | 1575 |
| BbsI | GAAGAC | 1 cut(s) | 334 |
| Bbv12I | GWGCWC | 1 cut(s) | 1312 |
| BbvCI | CCTCAGC | 1 cut(s) | 1046 |
| BbvI | GCAGC | 2 cut(s) | 1379, 1500 |
| BccI | CCATC | 7 cut(s) | 152, 910, 1142, 1165, 1217, 1503, 1539 |
| BceAI | ACGGC | 2 cut(s) | 159, 748 |
| BcnI | CCSGG | 2 cut(s) | 470, 618 |
| BcoDI | GTCTC | 2 cut(s) | 328, 857 |
| BfaI | CTAG | 2 cut(s) | 1260, 1548 |
| BfuAI | ACCTGC | 1 cut(s) | 1237 |
| BisI | GCNGC | 5 cut(s) | 257, 260, 405, 1368, 1489 |
| BlsI | GCNGC | 5 cut(s) | 258, 261, 406, 1369, 1490 |
| Bme1390I | CCNGG | 2 cut(s) | 470, 618 |
| Bme18I | GGWCC | 3 cut(s) | 582, 824, 1269 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 379 |
| BmeT110I | CYCGRG | 2 cut(s) | 783, 1451 |
| BmgT120I | GGNCC | 4 cut(s) | 582, 824, 1158, 1269 |
| BmiI | GGNNCC | 2 cut(s) | 583, 825 |
| BmrFI | CCNGG | 2 cut(s) | 470, 618 |
| BmrI | ACTGGG | 2 cut(s) | 82, 678 |
| BmsI | GCATC | 3 cut(s) | 750, 1108, 1549 |
| BmuI | ACTGGG | 2 cut(s) | 82, 678 |
| BpiI | GAAGAC | 1 cut(s) | 334 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1046 |
| Bpu14I | TTCGAA | 3 cut(s) | 98, 559, 791 |
| BpuEI | CTTGAG | 1 cut(s) | 1075 |
| BpuMI | CCSGG | 2 cut(s) | 470, 618 |
| BsaJI | CCNNGG | 4 cut(s) | 426, 1272, 1510, 1582 |
| BsaWI | WCCGGW | 1 cut(s) | 1340 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 623, 624, 1167, 1278, 1347, 1588 |
| Bse1I | ACTGG | 2 cut(s) | 88, 673 |
| Bse21I | CCTNAGG | 2 cut(s) | 828, 1356 |
| Bse3DI | GCAATG | 1 cut(s) | 1409 |
| BseDI | CCNNGG | 4 cut(s) | 426, 1272, 1510, 1582 |
| BseGI | GGATG | 5 cut(s) | 921, 1117, 1153, 1176, 1228 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 623, 624, 1167, 1278, 1347, 1588 |
| BseMI | GCAATG | 1 cut(s) | 1409 |
| BseMII | CTCAG | 5 cut(s) | 480, 556, 819, 1037, 1370 |
| BseNI | ACTGG | 2 cut(s) | 88, 673 |
| BseRI | GAGGAG | 4 cut(s) | 346, 674, 845, 970 |
| BseSI | GKGCMC | 1 cut(s) | 1312 |
| BseXI | GCAGC | 2 cut(s) | 1379, 1500 |
| BseYI | CCCAGC | 1 cut(s) | 535 |
| BsgI | GTGCAG | 1 cut(s) | 295 |
| Bsh1285I | CGRYCG | 1 cut(s) | 209 |
| BshFI | GGCC | 4 cut(s) | 165, 1160, 1354, 1575 |
| BsiEI | CGRYCG | 1 cut(s) | 209 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1312 |
| BsiHKCI | CYCGRG | 2 cut(s) | 783, 1451 |
| BsiSI | CCGG | 3 cut(s) | 470, 618, 1341 |
| BsiWI | CGTACG | 1 cut(s) | 1563 |
| BslFI | GGGAC | 2 cut(s) | 552, 1165 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 623, 624, 1167, 1278, 1347, 1588 |
| BsmAI | GTCTC | 2 cut(s) | 328, 857 |
| BsmBI | CGTCTC | 1 cut(s) | 857 |
| BsmFI | GGGAC | 2 cut(s) | 552, 1165 |
| BsnI | GGCC | 4 cut(s) | 165, 1160, 1354, 1575 |
| BsoBI | CYCGRG | 2 cut(s) | 783, 1451 |
| Bsp119I | TTCGAA | 3 cut(s) | 98, 559, 791 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1312 |
| Bsp143I | GATC | 7 cut(s) | 65, 222, 506, 736, 947, 986, 1446 |
| Bsp19I | CCATGG | 2 cut(s) | 1510, 1582 |
| BspANI | GGCC | 4 cut(s) | 165, 1160, 1354, 1575 |
| BspCNI | CTCAG | 5 cut(s) | 481, 555, 820, 1038, 1369 |
| BspLI | GGNNCC | 2 cut(s) | 583, 825 |
| BspMI | ACCTGC | 1 cut(s) | 1237 |
| BspPI | GGATC | 3 cut(s) | 514, 955, 1441 |
| BspQI | GCTCTTC | 1 cut(s) | 1434 |
| BspT104I | TTCGAA | 3 cut(s) | 98, 559, 791 |
| BsrBI | CCGCTC | 1 cut(s) | 407 |
| BsrDI | GCAATG | 1 cut(s) | 1409 |
| BsrI | ACTGG | 2 cut(s) | 88, 673 |
| BssECI | CCNNGG | 4 cut(s) | 426, 1272, 1510, 1582 |
| BssMI | GATC | 7 cut(s) | 65, 222, 506, 736, 947, 986, 1446 |
| BssT1I | CCWWGG | 4 cut(s) | 426, 1272, 1510, 1582 |
| Bst4CI | ACNGT | 6 cut(s) | 207, 322, 337, 1298, 1423, 1568 |
| Bst6I | CTCTTC | 3 cut(s) | 213, 1281, 1434 |
| BstBI | TTCGAA | 3 cut(s) | 98, 559, 791 |
| BstC8I | GCNNGC | 4 cut(s) | 398, 402, 416, 1416 |
| BstDEI | CTNAG | 5 cut(s) | 489, 542, 828, 1046, 1356 |
| BstDSI | CCRYGG | 2 cut(s) | 1510, 1582 |
| BstEII | GGTNACC | 1 cut(s) | 139 |
| BstF5I | GGATG | 5 cut(s) | 921, 1117, 1153, 1176, 1228 |
| BstKTI | GATC | 7 cut(s) | 68, 225, 509, 739, 950, 989, 1449 |
| BstMAI | GTCTC | 2 cut(s) | 328, 857 |
| BstMBI | GATC | 7 cut(s) | 65, 222, 506, 736, 947, 986, 1446 |
| BstMCI | CGRYCG | 1 cut(s) | 209 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 171 |
| BstNSI | RCATGY | 1 cut(s) | 1061 |
| BstPI | GGTNACC | 1 cut(s) | 139 |
| BstSCI | CCNGG | 2 cut(s) | 468, 616 |
| BstSLI | GKGCMC | 1 cut(s) | 1312 |
| BstV1I | GCAGC | 2 cut(s) | 1379, 1500 |
| BstV2I | GAAGAC | 1 cut(s) | 334 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 384, 1343, 1511, 1583 |
| Bsu36I | CCTNAGG | 2 cut(s) | 828, 1356 |
| BsuRI | GGCC | 4 cut(s) | 165, 1160, 1354, 1575 |
| BtgI | CCRYGG | 2 cut(s) | 1510, 1582 |
| BtsCI | GGATG | 5 cut(s) | 921, 1117, 1153, 1176, 1228 |
| BtsIMutI | CAGTG | 1 cut(s) | 318 |
| BveI | ACCTGC | 1 cut(s) | 1237 |
| Cac8I | GCNNGC | 4 cut(s) | 398, 402, 416, 1416 |
| Cfr13I | GGNCC | 4 cut(s) | 582, 824, 1158, 1269 |
| CseI | GACGC | 1 cut(s) | 1373 |
| Csp6I | GTAC | 3 cut(s) | 446, 486, 1564 |
| CviAII | CATG | 8 cut(s) | 530, 899, 1058, 1505, 1511, 1523, 1541, 1583 |
| CviQI | GTAC | 3 cut(s) | 446, 486, 1564 |
| DdeI | CTNAG | 5 cut(s) | 489, 542, 828, 1046, 1356 |
| DpnI | GATC | 7 cut(s) | 67, 224, 508, 738, 949, 988, 1448 |
| DpnII | GATC | 7 cut(s) | 65, 222, 506, 736, 947, 986, 1446 |
| DriI | GACNNNNNGTC | 1 cut(s) | 379 |
| EaeI | YGGCCR | 1 cut(s) | 1573 |
| Eam1104I | CTCTTC | 3 cut(s) | 213, 1281, 1434 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 379 |
| EarI | CTCTTC | 3 cut(s) | 213, 1281, 1434 |
| EciI | GGCGGA | 1 cut(s) | 401 |
| Eco130I | CCWWGG | 4 cut(s) | 426, 1272, 1510, 1582 |
| Eco47I | GGWCC | 3 cut(s) | 582, 824, 1269 |
| Eco81I | CCTNAGG | 2 cut(s) | 828, 1356 |
| Eco88I | CYCGRG | 2 cut(s) | 783, 1451 |
| Eco91I | GGTNACC | 1 cut(s) | 139 |
| EcoO109I | RGGNCCY | 1 cut(s) | 824 |
| EcoO65I | GGTNACC | 1 cut(s) | 139 |
| EcoT14I | CCWWGG | 4 cut(s) | 426, 1272, 1510, 1582 |
| ErhI | CCWWGG | 4 cut(s) | 426, 1272, 1510, 1582 |
| Esp3I | CGTCTC | 1 cut(s) | 857 |
| FaeI | CATG | 8 cut(s) | 533, 902, 1061, 1508, 1514, 1526, 1544, 1586 |
| FaqI | GGGAC | 2 cut(s) | 552, 1165 |
| FatI | CATG | 8 cut(s) | 529, 898, 1057, 1504, 1510, 1522, 1540, 1582 |
| Fnu4HI | GCNGC | 5 cut(s) | 257, 260, 405, 1368, 1489 |
| FokI | GGATG | 5 cut(s) | 928, 1124, 1160, 1183, 1235 |
| Fsp4HI | GCNGC | 5 cut(s) | 257, 260, 405, 1368, 1489 |
| FspBI | CTAG | 2 cut(s) | 1260, 1548 |
| GluI | GCNGC | 5 cut(s) | 257, 260, 405, 1368, 1489 |
| GsaI | CCCAGC | 1 cut(s) | 539 |
| HaeIII | GGCC | 4 cut(s) | 165, 1160, 1354, 1575 |
| HapII | CCGG | 3 cut(s) | 470, 618, 1341 |
| HgaI | GACGC | 1 cut(s) | 1373 |
| Hin1II | CATG | 8 cut(s) | 533, 902, 1061, 1508, 1514, 1526, 1544, 1586 |
| HindIII | AAGCTT | 2 cut(s) | 118, 125 |
| HinfI | GANTC | 4 cut(s) | 460, 540, 902, 1186 |
| HpaII | CCGG | 3 cut(s) | 470, 618, 1341 |
| Hpy166II | GTNNAC | 1 cut(s) | 1310 |
| Hpy188I | TCNGA | 8 cut(s) | 465, 511, 634, 741, 1111, 1222, 1427, 1464 |
| Hpy188III | TCNNGA | 5 cut(s) | 113, 710, 827, 1358, 1556 |
| Hpy8I | GTNNAC | 1 cut(s) | 1310 |
| Hpy99I | CGWCG | 2 cut(s) | 341, 994 |
| HpyAV | CCTTC | 3 cut(s) | 155, 793, 1132 |
| HpyCH4III | ACNGT | 6 cut(s) | 207, 322, 337, 1298, 1423, 1568 |
| HpyCH4V | TGCA | 8 cut(s) | 312, 886, 898, 1121, 1246, 1304, 1310, 1418 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 171 |
| HpyF3I | CTNAG | 5 cut(s) | 489, 542, 828, 1046, 1356 |
| Hsp92II | CATG | 8 cut(s) | 533, 902, 1061, 1508, 1514, 1526, 1544, 1586 |
| Kzo9I | GATC | 7 cut(s) | 65, 222, 506, 736, 947, 986, 1446 |
| LguI | GCTCTTC | 1 cut(s) | 1434 |
| LmnI | GCTCC | 4 cut(s) | 9, 551, 883, 1544 |
| Lsp1109I | GCAGC | 2 cut(s) | 1379, 1500 |
| LweI | GCATC | 3 cut(s) | 750, 1108, 1549 |
| MaeI | CTAG | 2 cut(s) | 1260, 1548 |
| MaeIII | GTNAC | 7 cut(s) | 139, 176, 210, 331, 961, 1330, 1514 |
| MalI | GATC | 7 cut(s) | 67, 224, 508, 738, 949, 988, 1448 |
| MbiI | CCGCTC | 1 cut(s) | 407 |
| MboI | GATC | 7 cut(s) | 65, 222, 506, 736, 947, 986, 1446 |
| MboII | GAAGA | 5 cut(s) | 230, 334, 1298, 1448, 1451 |
| MfeI | CAATTG | 1 cut(s) | 925 |
| MhlI | GDGCHC | 1 cut(s) | 1312 |
| MlsI | TGGCCA | 1 cut(s) | 1575 |
| MluCI | AATT | 5 cut(s) | 94, 572, 705, 858, 925 |
| MluNI | TGGCCA | 1 cut(s) | 1575 |
| MlyI | GAGTC | 1 cut(s) | 534 |
| MmeI | TCCRAC | 1 cut(s) | 634 |
| Mox20I | TGGCCA | 1 cut(s) | 1575 |
| MscI | TGGCCA | 1 cut(s) | 1575 |
| MseI | TTAA | 2 cut(s) | 570, 1077 |
| MslI | CAYNNNNRTG | 7 cut(s) | 174, 1062, 1341, 1503, 1509, 1539, 1581 |
| Msp20I | TGGCCA | 1 cut(s) | 1575 |
| MspA1I | CMGCKG | 1 cut(s) | 1370 |
| MspI | CCGG | 3 cut(s) | 470, 618, 1341 |
| MspR9I | CCNGG | 2 cut(s) | 470, 618 |
| MunI | CAATTG | 1 cut(s) | 925 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 171 |
| NciI | CCSGG | 2 cut(s) | 470, 618 |
| NcoI | CCATGG | 2 cut(s) | 1510, 1582 |
| NdeII | GATC | 7 cut(s) | 65, 222, 506, 736, 947, 986, 1446 |
| NlaIII | CATG | 8 cut(s) | 533, 902, 1061, 1508, 1514, 1526, 1544, 1586 |
| NlaIV | GGNNCC | 2 cut(s) | 583, 825 |
| NmuCI | GTSAC | 6 cut(s) | 139, 176, 210, 331, 1330, 1514 |
| NspI | RCATGY | 1 cut(s) | 1061 |
| NspV | TTCGAA | 3 cut(s) | 98, 559, 791 |
| OliI | CACNNNNGTG | 1 cut(s) | 174 |
| PaqCI | CACCTGC | 1 cut(s) | 1237 |
| PciSI | GCTCTTC | 1 cut(s) | 1434 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 336 |
| PfeI | GAWTC | 3 cut(s) | 460, 902, 1186 |
| Pfl23II | CGTACG | 1 cut(s) | 1563 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1278, 1588 |
| PkrI | GCNGC | 5 cut(s) | 258, 261, 406, 1369, 1490 |
| PleI | GAGTC | 1 cut(s) | 534 |
| PpsI | GAGTC | 1 cut(s) | 534 |
| PpuMI | RGGWCCY | 1 cut(s) | 824 |
| Psp5II | RGGWCCY | 1 cut(s) | 824 |
| PspEI | GGTNACC | 1 cut(s) | 139 |
| PspFI | CCCAGC | 1 cut(s) | 535 |
| PspLI | CGTACG | 1 cut(s) | 1563 |
| PspN4I | GGNNCC | 2 cut(s) | 583, 825 |
| PspPI | GGNCC | 4 cut(s) | 582, 824, 1158, 1269 |
| PspPPI | RGGWCCY | 1 cut(s) | 824 |
| PvuII | CAGCTG | 1 cut(s) | 1370 |
| RsaI | GTAC | 3 cut(s) | 447, 487, 1565 |
| RsaNI | GTAC | 3 cut(s) | 446, 486, 1564 |
| RseI | CAYNNNNRTG | 7 cut(s) | 174, 1062, 1341, 1503, 1509, 1539, 1581 |
| SapI | GCTCTTC | 1 cut(s) | 1434 |
| SaqAI | TTAA | 2 cut(s) | 570, 1077 |
| SatI | GCNGC | 5 cut(s) | 257, 260, 405, 1368, 1489 |
| Sau3AI | GATC | 7 cut(s) | 65, 222, 506, 736, 947, 986, 1446 |
| Sau96I | GGNCC | 4 cut(s) | 582, 824, 1158, 1269 |
| SchI | GAGTC | 1 cut(s) | 534 |
| ScrFI | CCNGG | 2 cut(s) | 470, 618 |
| SduI | GDGCHC | 1 cut(s) | 1312 |
| SfaNI | GCATC | 3 cut(s) | 750, 1108, 1549 |
| SfuI | TTCGAA | 3 cut(s) | 98, 559, 791 |
| SinI | GGWCC | 3 cut(s) | 582, 824, 1269 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 174, 1062, 1341, 1503, 1509, 1539, 1581 |
| SmlI | CTYRAG | 1 cut(s) | 1090 |
| SmoI | CTYRAG | 1 cut(s) | 1090 |
| Sse9I | AATT | 5 cut(s) | 94, 572, 705, 858, 925 |
| SspI | AATATT | 1 cut(s) | 1390 |
| SspMI | CTAG | 2 cut(s) | 1260, 1548 |
| StyD4I | CCNGG | 2 cut(s) | 468, 616 |
| StyI | CCWWGG | 4 cut(s) | 426, 1272, 1510, 1582 |
| TaaI | ACNGT | 6 cut(s) | 207, 322, 337, 1298, 1423, 1568 |
| TaqI | TCGA | 8 cut(s) | 98, 559, 747, 777, 791, 989, 1116, 1473 |
| TasI | AATT | 5 cut(s) | 94, 572, 705, 858, 925 |
| TatI | WGTACW | 1 cut(s) | 485 |
| TauI | GCSGC | 3 cut(s) | 259, 262, 407 |
| TfiI | GAWTC | 3 cut(s) | 460, 902, 1186 |
| Tru1I | TTAA | 2 cut(s) | 570, 1077 |
| Tru9I | TTAA | 2 cut(s) | 570, 1077 |
| TscAI | CASTG | 1 cut(s) | 325 |
| TseFI | GTSAC | 6 cut(s) | 139, 176, 210, 331, 1330, 1514 |
| TseI | GCWGC | 2 cut(s) | 1367, 1488 |
| Tsp45I | GTSAC | 6 cut(s) | 139, 176, 210, 331, 1330, 1514 |
| TspDTI | ATGAA | 3 cut(s) | 334, 518, 1491 |
| TspRI | CASTG | 1 cut(s) | 325 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1278, 1588 |
| VneI | GTGCAC | 1 cut(s) | 1308 |
| VpaK11BI | GGWCC | 3 cut(s) | 582, 824, 1269 |
| XapI | RAATTY | 2 cut(s) | 572, 705 |
| XceI | RCATGY | 1 cut(s) | 1061 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 297, 931, 1168, 1538 |
| XspI | CTAG | 2 cut(s) | 1260, 1548 |