Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0011194

Physical Location & Seq

Genomic Coordinates Reverse (-)

28612218 .. 28615086

Gene Structure 2869 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G324900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGGTGATCATCACAGAGGAAGAGGAAGACCAACAACGACAAGAGCCGAAACGGTCATCAGAGATCAAACCAACCCAACCTTCAAAATCAAAACCCACTCCTTCACCAACAGAAACACCAGTTGCCCCACAAAATGGTCAAAATCCATTCGCTTTCTGGTTCTACTTCACTTTTACAGTCTCTCTTGTGACCTTCTTCTTCATTTCTCTCTCCTCTCTGTCCCCACAAGACCCAAAGTCTTGGTTTTTGAGCTTGCCCACGTCTCTTCGCCAACACTACTCCAAGGGCCGCACTATAAAGGTTCAGACTCACTCAAACCAGAACCCCGTTGAAGTTTTTTCTACTGAGCAAGGTCCTATAACAGCAGAAAATGTTGTTATTGTTCATGGGCTGGGTCTTAGCTCCTACTCTTTTCGCAAAGTTATTGAATCTTTAGGCTCTAAAGGGGTTCGTGCGGTTGCGTTTGATTTACCTGGAAATGGGTTTTCGGATAAATCGGTGGTGGAGGTTGGAGAGGGACCAACTGGGATTTTAGGGAGGTTTTGGTATGTCTGTAGTGAAATTCAAGAGAAGGGTTTGTTTTGGGCATTTGATGAGATAATTGAAACTGGCCAGATTCCCTATGAAGAAATAGAATCTCGGATGCCAAAACAAAAGTTTGTAAAGCCAATTGAAATGGGTCCTGATGAGATTGGTAAGGTGTTGGGACAAGTGATTGAGACTGTAAGTTTGGCTCCTGTGCATTTGGTTTTGCATGATTCAGCTTTGGGGATGCTTGCAAATTGGGTTTTGGAGAATTCGGAAACCGTGAGGAGTGTGACGCTGATTGATACCTCATCCAGATCGACAGGTGCTTTGCCTTTGTGGGTTTTGGGAGTGCCAGTGGTTAGGGAGGTTGTGTTGAGGTTTTCATATGCTTATACATGGTTGATTAAGCTGTGTTGCTCAAGGGGGATTGATGTTTTGGAAGTGGATGCGCATAGACTTCTTTTGAAGGGTAGGGATGGGACAAAAGCAATTGTTGGAATGGGGAAGAAGTTAAATCATAGCTTTGATATAGCAGAGTGGGGTGGCTCGGATGGACTGATAGGTGTGCCGATGCAAGTGCTTTGGTCTAGCAGTTGGTCCAAGGAATGGAGTGAAGAGGGAAACCGAGTTGCGAGTGCACTTCCACAGGCAACTTTTGTCACCCATTCTGGTGGACGGTGGCCTCAGGAAGACGCAGCTGATGAGGTAGCTGAAAATATTGCTTATTTTGTGTCCTCGCTGCCTGCATCTGTCAGAAAGGTTGAGGAAGAGCCCATCCCGGAGCATATTCAGAAGATGTTTGATGAAGCAAAAAGCGGTGAGCATCATGGTCATGATGATGGGCATGACCACCATCATGGTCATGGCCATGTTCATGGCACTGGTTATCCTGATGCATACGGTCTCGGCCACAGTCATGGATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0006810 GO:0008150 GO:0009605 GO:0009612 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009914 GO:0009926 GO:0010033 GO:0010817 GO:0012505 GO:0016020 GO:0031090 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0060918 GO:0065007 GO:0065008 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6

Protein Analysis

485

Amino Acids

53.62

Weight (kDa)

5.6

Isoelectric Point (pI)

46.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011194)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54990
fragaria_vesca	FvH4_6g06010
malus_domestica	MD04G1204900.v1.1 MD12G1218600.v1.1
prunus_persica	Prupe.6G324900_v2.0.a1
pyrus_communis	pycom04g18110 pycom12g20410
rosa_chinensis	RchiOBHm_Chr3g0454971
rosa_laevigata	RLG00000025397
rosa_multiflora	Rmu_sc0002169.1_g000009
rosa_roxburghii	Rroxscaffold_6G00424640
rosa_rugosa	Rorug03G0003400 Rorug03G0003500 Rorug03G0003500 Rorug03G0003600
rosa_samantha	Rh3AG063200 Rh3BG065200 Rh3CG064000 Rh3DG065200
rosa_wichuraiana	Rw3G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	978
AccB7I	CCANNNNNTGG	2 cut(s)	134, 1134
AciI	CCGC	3 cut(s)	289, 455, 1344
AcoI	YGGCCR	3 cut(s)	610, 1393, 1435
AcsI	RAATTY	2 cut(s)	561, 796
AfiI	CCNNNNNNNGG	3 cut(s)	134, 479, 1134
AgsI	TTSAA	7 cut(s)	84, 332, 428, 566, 605, 674, 994
AhdI	GACNNNNNGTC	1 cut(s)	235
AjiI	CACGTC	1 cut(s)	261
AjnI	CCWGG	1 cut(s)	472
AjuI	GAANNNNNNNTTGG	2 cut(s)	64, 96
AluBI	AGCT	7 cut(s)	252, 402, 764, 937, 1050, 1226, 1238
AluI	AGCT	7 cut(s)	252, 402, 764, 937, 1050, 1226, 1238
Alw21I	GWGCWC	1 cut(s)	1168
Alw26I	GTCTC	4 cut(s)	184, 267, 713, 1436
Alw44I	GTGCAC	1 cut(s)	1164
AoxI	GGCC	5 cut(s)	286, 610, 1208, 1393, 1435
ApaLI	GTGCAC	1 cut(s)	1164
ApeKI	GCWGC	2 cut(s)	1223, 1267
ApoI	RAATTY	2 cut(s)	561, 796
ArsI	GACNNNNNNTTYG	4 cut(s)	712, 744, 838, 870
AspLEI	GCGC	1 cut(s)	979
AspS9I	GGNCC	5 cut(s)	286, 353, 518, 680, 1125
AsuC2I	CCSGG	1 cut(s)	1307
AsuHPI	GGTGA	4 cut(s)	16, 96, 1180, 1358
AvaII	GGWCC	4 cut(s)	353, 518, 680, 1125
AxyI	CCTNAGG	1 cut(s)	1212
BaeGI	GKGCMC	1 cut(s)	1168
BalI	TGGCCA	2 cut(s)	612, 1395
BanII	GRGCYC	1 cut(s)	1302
BbsI	GAAGAC	2 cut(s)	33, 1224
Bbv12I	GWGCWC	1 cut(s)	1168
BbvI	GCAGC	2 cut(s)	1235, 1254
BccI	CCATC	6 cut(s)	998, 1073, 1310, 1361, 1389, 1443
BcgI	CGANNNNNNTGC	2 cut(s)	1087, 1121
BciT130I	CCWGG	1 cut(s)	474
BclI	TGATCA	1 cut(s)	6
BcnI	CCSGG	1 cut(s)	1307
BcoDI	GTCTC	4 cut(s)	184, 267, 713, 1436
BfaI	CTAG	1 cut(s)	1116
BfmI	CTRYAG	1 cut(s)	553
BisI	GCNGC	3 cut(s)	289, 1224, 1268
BlsI	GCNGC	3 cut(s)	290, 1225, 1269
Bme1390I	CCNGG	2 cut(s)	474, 1307
Bme18I	GGWCC	4 cut(s)	353, 518, 680, 1125
BmeRI	GACNNNNNGTC	1 cut(s)	235
BmgBI	CACGTC	1 cut(s)	261
BmgT120I	GGNCC	5 cut(s)	286, 353, 518, 680, 1125
BmiI	GGNNCC	3 cut(s)	519, 681, 735
BmrFI	CCNGG	2 cut(s)	474, 1307
BmrI	ACTGGG	1 cut(s)	534
BmsI	GCATC	7 cut(s)	633, 762, 964, 1089, 1283, 1360, 1411
BmuI	ACTGGG	1 cut(s)	534
BpiI	GAAGAC	2 cut(s)	33, 1224
BpuEI	CTTGAG	1 cut(s)	931
BpuMI	CCSGG	1 cut(s)	1307
BsaI	GGTCTC	1 cut(s)	1436
BsaJI	CCNNGG	2 cut(s)	282, 1128
BsaXI	ACNNNNNCTCC	4 cut(s)	867, 884, 897, 914
Bsc4I	CCNNNNNNNGG	3 cut(s)	134, 479, 1134
Bse1I	ACTGG	5 cut(s)	119, 529, 613, 881, 1414
Bse21I	CCTNAGG	1 cut(s)	1212
BseBI	CCWGG	1 cut(s)	474
BseDI	CCNNGG	2 cut(s)	282, 1128
BseGI	GGATG	8 cut(s)	648, 777, 836, 979, 1009, 1084, 1302, 1454
BseLI	CCNNNNNNNGG	3 cut(s)	134, 479, 1134
BseMII	CTCAG	2 cut(s)	336, 1226
BseNI	ACTGG	5 cut(s)	119, 529, 613, 881, 1414
BseRI	GAGGAG	2 cut(s)	202, 826
BseSI	GKGCMC	1 cut(s)	1168
BseXI	GCAGC	2 cut(s)	1235, 1254
BseYI	CCCAGC	1 cut(s)	391
BshFI	GGCC	5 cut(s)	288, 612, 1210, 1395, 1437
BsiHKAI	GWGCWC	1 cut(s)	1168
BsiSI	CCGG	1 cut(s)	1307
BslFI	GGGAC	4 cut(s)	205, 531, 720, 1021
BslI	CCNNNNNNNGG	3 cut(s)	134, 479, 1134
BsmAI	GTCTC	4 cut(s)	184, 267, 713, 1436
BsmBI	CGTCTC	1 cut(s)	267
BsmFI	GGGAC	4 cut(s)	205, 531, 720, 1021
BsnI	GGCC	5 cut(s)	288, 612, 1210, 1395, 1437
Bso31I	GGTCTC	1 cut(s)	1436
Bsp1286I	GDGCHC	2 cut(s)	1168, 1302
Bsp143I	GATC	3 cut(s)	6, 63, 842
BspACI	CCGC	3 cut(s)	289, 455, 1344
BspANI	GGCC	5 cut(s)	288, 612, 1210, 1395, 1437
BspCNI	CTCAG	2 cut(s)	337, 1225
BspHI	TCATGA	1 cut(s)	1360
BspLI	GGNNCC	3 cut(s)	519, 681, 735
BspQI	GCTCTTC	1 cut(s)	1290
BspTNI	GGTCTC	1 cut(s)	1436
BsrI	ACTGG	5 cut(s)	119, 529, 613, 881, 1414
BssECI	CCNNGG	2 cut(s)	282, 1128
BssMI	GATC	3 cut(s)	6, 63, 842
BssT1I	CCWWGG	2 cut(s)	282, 1128
Bst2UI	CCWGG	1 cut(s)	474
Bst4CI	ACNGT	7 cut(s)	54, 178, 724, 808, 1206, 1430, 1442
Bst6I	CTCTTC	4 cut(s)	15, 270, 1137, 1290
BstC8I	GCNNGC	3 cut(s)	254, 777, 1272
BstDEI	CTNAG	3 cut(s)	345, 398, 1212
BstF5I	GGATG	8 cut(s)	648, 777, 836, 979, 1009, 1084, 1302, 1454
BstHHI	GCGC	1 cut(s)	979
BstKTI	GATC	3 cut(s)	9, 66, 845
BstMAI	GTCTC	4 cut(s)	184, 267, 713, 1436
BstMBI	GATC	3 cut(s)	6, 63, 842
BstNI	CCWGG	1 cut(s)	474
BstSCI	CCNGG	2 cut(s)	472, 1305
BstSFI	CTRYAG	1 cut(s)	553
BstSLI	GKGCMC	1 cut(s)	1168
BstV1I	GCAGC	2 cut(s)	1235, 1254
BstV2I	GAAGAC	2 cut(s)	33, 1224
BstXI	CCANNNNNNTGG	5 cut(s)	240, 1199, 1385, 1403, 1445
Bsu36I	CCTNAGG	1 cut(s)	1212
BsuRI	GGCC	5 cut(s)	288, 612, 1210, 1395, 1437
BtrI	CACGTC	1 cut(s)	261
BtsCI	GGATG	8 cut(s)	648, 777, 836, 979, 1009, 1084, 1302, 1454
BtsIMutI	CAGTG	2 cut(s)	888, 1407
Cac8I	GCNNGC	3 cut(s)	254, 777, 1272
CciI	TCATGA	1 cut(s)	1360
CfoI	GCGC	1 cut(s)	979
Cfr13I	GGNCC	5 cut(s)	286, 353, 518, 680, 1125
CseI	GACGC	2 cut(s)	829, 1229
DdeI	CTNAG	3 cut(s)	345, 398, 1212
DpnI	GATC	3 cut(s)	8, 65, 844
DpnII	GATC	3 cut(s)	6, 63, 842
DriI	GACNNNNNGTC	1 cut(s)	235
EaeI	YGGCCR	3 cut(s)	610, 1393, 1435
Eam1104I	CTCTTC	4 cut(s)	15, 270, 1137, 1290
Eam1105I	GACNNNNNGTC	1 cut(s)	235
EarI	CTCTTC	4 cut(s)	15, 270, 1137, 1290
Eco130I	CCWWGG	2 cut(s)	282, 1128
Eco24I	GRGCYC	1 cut(s)	1302
Eco31I	GGTCTC	1 cut(s)	1436
Eco47I	GGWCC	4 cut(s)	353, 518, 680, 1125
Eco81I	CCTNAGG	1 cut(s)	1212
EcoO109I	RGGNCCY	2 cut(s)	353, 680
EcoRI	GAATTC	1 cut(s)	796
EcoRII	CCWGG	1 cut(s)	472
EcoT14I	CCWWGG	2 cut(s)	282, 1128
EcoT22I	ATGCAT	1 cut(s)	1426
EcoT38I	GRGCYC	1 cut(s)	1302
ErhI	CCWWGG	2 cut(s)	282, 1128
Esp3I	CGTCTC	1 cut(s)	267
FaqI	GGGAC	4 cut(s)	205, 531, 720, 1021
FauNDI	CATATG	1 cut(s)	913
FbaI	TGATCA	1 cut(s)	6
Fnu4HI	GCNGC	3 cut(s)	289, 1224, 1268
FokI	GGATG	7 cut(s)	655, 784, 823, 986, 1016, 1091, 1289
FriOI	GRGCYC	1 cut(s)	1302
Fsp4HI	GCNGC	3 cut(s)	289, 1224, 1268
FspAI	RTGCGCAY	1 cut(s)	978
FspBI	CTAG	1 cut(s)	1116
FspI	TGCGCA	1 cut(s)	978
GlaI	GCGC	1 cut(s)	978
GluI	GCNGC	3 cut(s)	289, 1224, 1268
GsaI	CCCAGC	1 cut(s)	395
HaeIII	GGCC	5 cut(s)	288, 612, 1210, 1395, 1437
HapII	CCGG	1 cut(s)	1307
HgaI	GACGC	2 cut(s)	829, 1229
HhaI	GCGC	1 cut(s)	979
Hin6I	GCGC	1 cut(s)	977
HinP1I	GCGC	1 cut(s)	977
HinfI	GANTC	5 cut(s)	307, 428, 616, 635, 758
HpaII	CCGG	1 cut(s)	1307
HphI	GGTGA	4 cut(s)	16, 96, 1180, 1358
Hpy166II	GTNNAC	2 cut(s)	1166, 1202
Hpy188I	TCNGA	8 cut(s)	61, 306, 490, 642, 802, 1078, 1283, 1320
Hpy188III	TCNNGA	6 cut(s)	566, 683, 840, 1214, 1361, 1418
Hpy8I	GTNNAC	2 cut(s)	1166, 1202
HpyAV	CCTTC	5 cut(s)	90, 111, 202, 565, 988
HpyCH4III	ACNGT	7 cut(s)	54, 178, 724, 808, 1206, 1430, 1442
HpyCH4IV	ACGT	1 cut(s)	260
HpyCH4V	TGCA	7 cut(s)	742, 754, 779, 1102, 1166, 1274, 1424
HpyF3I	CTNAG	3 cut(s)	345, 398, 1212
HpySE526I	ACGT	1 cut(s)	260
HspAI	GCGC	1 cut(s)	977
Ksp22I	TGATCA	1 cut(s)	6
Kzo9I	GATC	3 cut(s)	6, 63, 842
LguI	GCTCTTC	1 cut(s)	1290
LmnI	GCTCC	3 cut(s)	407, 739, 1309
Lsp1109I	GCAGC	2 cut(s)	1235, 1254
LweI	GCATC	7 cut(s)	633, 762, 964, 1089, 1283, 1360, 1411
MaeI	CTAG	1 cut(s)	1116
MaeII	ACGT	1 cut(s)	260
MaeIII	GTNAC	3 cut(s)	187, 817, 1186
MalI	GATC	3 cut(s)	8, 65, 844
MboI	GATC	3 cut(s)	6, 63, 842
MfeI	CAATTG	2 cut(s)	669, 1017
MhlI	GDGCHC	2 cut(s)	1168, 1302
MlsI	TGGCCA	2 cut(s)	612, 1395
MluCI	AATT	6 cut(s)	561, 600, 669, 781, 796, 1017
MluNI	TGGCCA	2 cut(s)	612, 1395
MlyI	GAGTC	1 cut(s)	301
MmeI	TCCRAC	2 cut(s)	490, 1003
Mox20I	TGGCCA	2 cut(s)	612, 1395
Mph1103I	ATGCAT	1 cut(s)	1426
MscI	TGGCCA	2 cut(s)	612, 1395
MseI	TTAA	2 cut(s)	933, 1040
MslI	CAYNNNNRTG	8 cut(s)	1197, 1359, 1365, 1383, 1389, 1395, 1401, 1443
Msp20I	TGGCCA	2 cut(s)	612, 1395
MspA1I	CMGCKG	1 cut(s)	1226
MspI	CCGG	1 cut(s)	1307
MspR9I	CCNGG	2 cut(s)	474, 1307
MunI	CAATTG	2 cut(s)	669, 1017
MvaI	CCWGG	1 cut(s)	474
NciI	CCSGG	1 cut(s)	1307
NdeI	CATATG	1 cut(s)	913
NdeII	GATC	3 cut(s)	6, 63, 842
NlaIV	GGNNCC	3 cut(s)	519, 681, 735
NmeAIII	GCCGAG	1 cut(s)	1413
NmuCI	GTSAC	3 cut(s)	187, 817, 1186
NsbI	TGCGCA	1 cut(s)	978
NsiI	ATGCAT	1 cut(s)	1426
PagI	TCATGA	1 cut(s)	1360
PciSI	GCTCTTC	1 cut(s)	1290
PfeI	GAWTC	4 cut(s)	428, 616, 635, 758
PflMI	CCANNNNNTGG	2 cut(s)	134, 1134
PfoI	TCCNGGA	1 cut(s)	1305
PkrI	GCNGC	3 cut(s)	290, 1225, 1269
PleI	GAGTC	1 cut(s)	301
PpsI	GAGTC	1 cut(s)	301
PpuMI	RGGWCCY	2 cut(s)	353, 680
Psp5II	RGGWCCY	2 cut(s)	353, 680
Psp6I	CCWGG	1 cut(s)	472
PspFI	CCCAGC	1 cut(s)	391
PspGI	CCWGG	1 cut(s)	472
PspN4I	GGNNCC	3 cut(s)	519, 681, 735
PspPI	GGNCC	5 cut(s)	286, 353, 518, 680, 1125
PspPPI	RGGWCCY	2 cut(s)	353, 680
PvuII	CAGCTG	1 cut(s)	1226
RseI	CAYNNNNRTG	8 cut(s)	1197, 1359, 1365, 1383, 1389, 1395, 1401, 1443
SapI	GCTCTTC	1 cut(s)	1290
SaqAI	TTAA	2 cut(s)	933, 1040
SatI	GCNGC	3 cut(s)	289, 1224, 1268
Sau3AI	GATC	3 cut(s)	6, 63, 842
Sau96I	GGNCC	5 cut(s)	286, 353, 518, 680, 1125
SchI	GAGTC	1 cut(s)	301
ScrFI	CCNGG	2 cut(s)	474, 1307
SduI	GDGCHC	2 cut(s)	1168, 1302
SfaNI	GCATC	7 cut(s)	633, 762, 964, 1089, 1283, 1360, 1411
SfcI	CTRYAG	1 cut(s)	553
SinI	GGWCC	4 cut(s)	353, 518, 680, 1125
SmiMI	CAYNNNNRTG	8 cut(s)	1197, 1359, 1365, 1383, 1389, 1395, 1401, 1443
SmlI	CTYRAG	1 cut(s)	946
SmoI	CTYRAG	1 cut(s)	946
Sse9I	AATT	6 cut(s)	561, 600, 669, 781, 796, 1017
SsiI	CCGC	3 cut(s)	289, 455, 1344
SspI	AATATT	1 cut(s)	1246
SspMI	CTAG	1 cut(s)	1116
StyD4I	CCNGG	2 cut(s)	472, 1305
StyI	CCWWGG	2 cut(s)	282, 1128
TaaI	ACNGT	7 cut(s)	54, 178, 724, 808, 1206, 1430, 1442
TaiI	ACGT	1 cut(s)	263
TaqI	TCGA	1 cut(s)	845
TasI	AATT	6 cut(s)	561, 600, 669, 781, 796, 1017
TauI	GCSGC	1 cut(s)	291
TfiI	GAWTC	4 cut(s)	428, 616, 635, 758
Tru1I	TTAA	2 cut(s)	933, 1040
Tru9I	TTAA	2 cut(s)	933, 1040
TscAI	CASTG	2 cut(s)	888, 1414
TseFI	GTSAC	3 cut(s)	187, 817, 1186
TseI	GCWGC	2 cut(s)	1223, 1267
Tsp45I	GTSAC	3 cut(s)	187, 817, 1186
TspDTI	ATGAA	6 cut(s)	190, 374, 639, 900, 1347, 1391
TspRI	CASTG	2 cut(s)	888, 1414
Van91I	CCANNNNNTGG	2 cut(s)	134, 1134
VneI	GTGCAC	1 cut(s)	1164
VpaK11BI	GGWCC	4 cut(s)	353, 518, 680, 1125
XapI	RAATTY	2 cut(s)	561, 796
XcmI	CCANNNNNNNNNTGG	2 cut(s)	153, 1388
XspI	CTAG	1 cut(s)	1116
Zsp2I	ATGCAT	1 cut(s)	1426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.