Protein AUXIN RESPONSE
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G54990 |
| fragaria_vesca | FvH4_6g06010 |
| malus_domestica | MD04G1204900.v1.1 MD12G1218600.v1.1 |
| prunus_persica | Prupe.6G324900_v2.0.a1 |
| pyrus_communis | pycom04g18110 pycom12g20410 |
| rosa_chinensis | RchiOBHm_Chr3g0454971 |
| rosa_laevigata | RLG00000025397 |
| rosa_multiflora | Rmu_sc0002169.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00424640 |
| rosa_rugosa | Rorug03G0003400 Rorug03G0003500 Rorug03G0003500 Rorug03G0003600 |
| rosa_samantha | Rh3AG063200 Rh3BG065200 Rh3CG064000 Rh3DG065200 |
| rosa_wichuraiana | Rw3G004960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 323 |
| AarI | CACCTGC | 1 cut(s) | 550 |
| Acc36I | ACCTGC | 2 cut(s) | 550, 1126 |
| AccB1I | GGYRCC | 2 cut(s) | 562, 996 |
| AciI | CCGC | 2 cut(s) | 204, 270 |
| AclWI | GGATC | 2 cut(s) | 1144, 1271 |
| AcoI | YGGCCR | 1 cut(s) | 1297 |
| AcsI | RAATTY | 1 cut(s) | 507 |
| AcyI | GRCGYC | 1 cut(s) | 997 |
| AfaI | GTAC | 1 cut(s) | 1283 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 425, 426, 634 |
| AflIII | ACRYGT | 1 cut(s) | 1246 |
| AgsI | TTSAA | 7 cut(s) | 80, 157, 278, 374, 512, 842, 889 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 181 |
| AjnI | CCWGG | 1 cut(s) | 466 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 60, 92, 719, 751, 852, 884 |
| AluBI | AGCT | 5 cut(s) | 198, 290, 897, 1085, 1265 |
| AluI | AGCT | 5 cut(s) | 198, 290, 897, 1085, 1265 |
| Alw26I | GTCTC | 4 cut(s) | 33, 110, 116, 659 |
| AlwI | GGATC | 2 cut(s) | 1144, 1271 |
| AoxI | GGCC | 5 cut(s) | 625, 1055, 1182, 1285, 1297 |
| ApaI | GGGCCC | 1 cut(s) | 629 |
| ApeKI | GCWGC | 2 cut(s) | 211, 1070 |
| ApoI | RAATTY | 1 cut(s) | 507 |
| AspA2I | CCTAGG | 1 cut(s) | 379 |
| AspLEI | GCGC | 1 cut(s) | 999 |
| AspS9I | GGNCC | 4 cut(s) | 247, 262, 625, 626 |
| AsuC2I | CCSGG | 2 cut(s) | 260, 420 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 1027 |
| AsuII | TTCGAA | 1 cut(s) | 725 |
| AvaII | GGWCC | 2 cut(s) | 247, 262 |
| AvrII | CCTAGG | 1 cut(s) | 379 |
| AxyI | CCTNAGG | 2 cut(s) | 630, 1059 |
| BaeGI | GKGCMC | 2 cut(s) | 567, 629 |
| BalI | TGGCCA | 1 cut(s) | 1299 |
| BanI | GGYRCC | 2 cut(s) | 562, 996 |
| BanII | GRGCYC | 1 cut(s) | 629 |
| BbsI | GAAGAC | 1 cut(s) | 30 |
| BbvI | GCAGC | 2 cut(s) | 198, 1082 |
| BccI | CCATC | 5 cut(s) | 141, 712, 846, 920, 1299 |
| BceAI | ACGGC | 1 cut(s) | 1300 |
| BciT130I | CCWGG | 1 cut(s) | 468 |
| BclI | TGATCA | 1 cut(s) | 6 |
| BcnI | CCSGG | 2 cut(s) | 260, 420 |
| BcoDI | GTCTC | 4 cut(s) | 33, 110, 116, 659 |
| BfaI | CTAG | 2 cut(s) | 380, 585 |
| BfoI | RGCGCY | 1 cut(s) | 1000 |
| BfuAI | ACCTGC | 2 cut(s) | 550, 1126 |
| BisI | GCNGC | 2 cut(s) | 212, 1071 |
| BlnI | CCTAGG | 1 cut(s) | 379 |
| BlsI | GCNGC | 2 cut(s) | 213, 1072 |
| Bme1390I | CCNGG | 3 cut(s) | 260, 420, 468 |
| Bme18I | GGWCC | 2 cut(s) | 247, 262 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 181 |
| BmgT120I | GGNCC | 4 cut(s) | 247, 262, 625, 626 |
| BmiI | GGNNCC | 5 cut(s) | 385, 564, 627, 681, 998 |
| BmrFI | CCNGG | 3 cut(s) | 260, 420, 468 |
| BmrI | ACTGGG | 2 cut(s) | 564, 789 |
| BmsI | GCATC | 4 cut(s) | 215, 599, 1057, 1213 |
| BmuI | ACTGGG | 2 cut(s) | 564, 789 |
| BpiI | GAAGAC | 1 cut(s) | 30 |
| BpmI | CTGGAG | 1 cut(s) | 1281 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1155 |
| Bpu14I | TTCGAA | 1 cut(s) | 725 |
| BpuMI | CCSGG | 2 cut(s) | 260, 420 |
| BsaHI | GRCGYC | 1 cut(s) | 997 |
| BsaI | GGTCTC | 1 cut(s) | 33 |
| BsaJI | CCNNGG | 5 cut(s) | 228, 379, 466, 1288, 1300 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 108, 138 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 425, 426, 634 |
| Bse1I | ACTGG | 3 cut(s) | 559, 784, 1198 |
| Bse21I | CCTNAGG | 2 cut(s) | 630, 1059 |
| Bse3DI | GCAATG | 1 cut(s) | 1092 |
| BseBI | CCWGG | 1 cut(s) | 468 |
| BseDI | CCNNGG | 5 cut(s) | 228, 379, 466, 1288, 1300 |
| BseGI | GGATG | 5 cut(s) | 723, 857, 931, 1072, 1310 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 425, 426, 634 |
| BseMI | GCAATG | 1 cut(s) | 1092 |
| BseMII | CTCAG | 5 cut(s) | 282, 335, 621, 1073, 1146 |
| BseNI | ACTGG | 3 cut(s) | 559, 784, 1198 |
| BseRI | GAGGAG | 3 cut(s) | 587, 647, 772 |
| BseSI | GKGCMC | 2 cut(s) | 567, 629 |
| BseXI | GCAGC | 2 cut(s) | 198, 1082 |
| BseYI | CCCAGC | 1 cut(s) | 1220 |
| BsgI | GTGCAG | 1 cut(s) | 767 |
| BshFI | GGCC | 5 cut(s) | 627, 1057, 1184, 1287, 1299 |
| BshNI | GGYRCC | 2 cut(s) | 562, 996 |
| BsiSI | CCGG | 2 cut(s) | 260, 420 |
| BsiWI | CGTACG | 1 cut(s) | 1281 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 425, 426, 634 |
| BsmAI | GTCTC | 4 cut(s) | 33, 110, 116, 659 |
| BsmBI | CGTCTC | 2 cut(s) | 110, 116 |
| BsnI | GGCC | 5 cut(s) | 627, 1057, 1184, 1287, 1299 |
| Bso31I | GGTCTC | 1 cut(s) | 33 |
| Bsp119I | TTCGAA | 1 cut(s) | 725 |
| Bsp120I | GGGCCC | 1 cut(s) | 625 |
| Bsp1286I | GDGCHC | 2 cut(s) | 567, 629 |
| Bsp143I | GATC | 3 cut(s) | 6, 1149, 1276 |
| BspACI | CCGC | 2 cut(s) | 204, 270 |
| BspANI | GGCC | 5 cut(s) | 627, 1057, 1184, 1287, 1299 |
| BspCNI | CTCAG | 5 cut(s) | 283, 336, 622, 1072, 1147 |
| BspLI | GGNNCC | 5 cut(s) | 385, 564, 627, 681, 998 |
| BspMI | ACCTGC | 2 cut(s) | 550, 1126 |
| BspPI | GGATC | 2 cut(s) | 1144, 1271 |
| BspQI | GCTCTTC | 2 cut(s) | 1137, 1224 |
| BspT104I | TTCGAA | 1 cut(s) | 725 |
| BspT107I | GGYRCC | 2 cut(s) | 562, 996 |
| BspTNI | GGTCTC | 1 cut(s) | 33 |
| BsrDI | GCAATG | 1 cut(s) | 1092 |
| BsrI | ACTGG | 3 cut(s) | 559, 784, 1198 |
| BssECI | CCNNGG | 5 cut(s) | 228, 379, 466, 1288, 1300 |
| BssMI | GATC | 3 cut(s) | 6, 1149, 1276 |
| BssNI | GRCGYC | 1 cut(s) | 997 |
| BssT1I | CCWWGG | 3 cut(s) | 228, 379, 1288 |
| Bst2UI | CCWGG | 1 cut(s) | 468 |
| Bst4CI | ACNGT | 4 cut(s) | 76, 448, 1053, 1126 |
| Bst6I | CTCTTC | 3 cut(s) | 984, 1137, 1224 |
| BstACI | GRCGYC | 1 cut(s) | 997 |
| BstBI | TTCGAA | 1 cut(s) | 725 |
| BstDEI | CTNAG | 6 cut(s) | 291, 344, 630, 975, 1059, 1155 |
| BstDSI | CCRYGG | 1 cut(s) | 1300 |
| BstF5I | GGATG | 5 cut(s) | 723, 857, 931, 1072, 1310 |
| BstH2I | RGCGCY | 1 cut(s) | 1000 |
| BstHHI | GCGC | 1 cut(s) | 999 |
| BstKTI | GATC | 3 cut(s) | 9, 1152, 1279 |
| BstMAI | GTCTC | 4 cut(s) | 33, 110, 116, 659 |
| BstMBI | GATC | 3 cut(s) | 6, 1149, 1276 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 791, 1231 |
| BstNI | CCWGG | 1 cut(s) | 468 |
| BstNSI | RCATGY | 1 cut(s) | 1250 |
| BstSCI | CCNGG | 3 cut(s) | 258, 418, 466 |
| BstSLI | GKGCMC | 2 cut(s) | 567, 629 |
| BstV1I | GCAGC | 2 cut(s) | 198, 1082 |
| BstV2I | GAAGAC | 1 cut(s) | 30 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 186, 622, 1046 |
| Bsu36I | CCTNAGG | 2 cut(s) | 630, 1059 |
| BsuRI | GGCC | 5 cut(s) | 627, 1057, 1184, 1287, 1299 |
| BtgI | CCRYGG | 1 cut(s) | 1300 |
| BtgZI | GCGATG | 1 cut(s) | 192 |
| BtsCI | GGATG | 5 cut(s) | 723, 857, 931, 1072, 1310 |
| BtsIMutI | CAGTG | 1 cut(s) | 767 |
| BveI | ACCTGC | 2 cut(s) | 550, 1126 |
| CfoI | GCGC | 1 cut(s) | 999 |
| Cfr13I | GGNCC | 4 cut(s) | 247, 262, 625, 626 |
| CseI | GACGC | 1 cut(s) | 203 |
| Csp6I | GTAC | 1 cut(s) | 1282 |
| CviQI | GTAC | 1 cut(s) | 1282 |
| DdeI | CTNAG | 6 cut(s) | 291, 344, 630, 975, 1059, 1155 |
| DinI | GGCGCC | 1 cut(s) | 998 |
| DpnI | GATC | 3 cut(s) | 8, 1151, 1278 |
| DpnII | GATC | 3 cut(s) | 6, 1149, 1276 |
| DriI | GACNNNNNGTC | 1 cut(s) | 181 |
| EaeI | YGGCCR | 1 cut(s) | 1297 |
| Eam1104I | CTCTTC | 3 cut(s) | 984, 1137, 1224 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 181 |
| EarI | CTCTTC | 3 cut(s) | 984, 1137, 1224 |
| EciI | GGCGGA | 1 cut(s) | 259 |
| Eco130I | CCWWGG | 3 cut(s) | 228, 379, 1288 |
| Eco24I | GRGCYC | 1 cut(s) | 629 |
| Eco31I | GGTCTC | 1 cut(s) | 33 |
| Eco47I | GGWCC | 2 cut(s) | 247, 262 |
| Eco81I | CCTNAGG | 2 cut(s) | 630, 1059 |
| EcoO109I | RGGNCCY | 1 cut(s) | 626 |
| EcoRII | CCWGG | 1 cut(s) | 466 |
| EcoT14I | CCWWGG | 3 cut(s) | 228, 379, 1288 |
| EcoT38I | GRGCYC | 1 cut(s) | 629 |
| EgeI | GGCGCC | 1 cut(s) | 998 |
| EheI | GGCGCC | 1 cut(s) | 998 |
| ErhI | CCWWGG | 3 cut(s) | 228, 379, 1288 |
| Esp3I | CGTCTC | 2 cut(s) | 110, 116 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1013, 1045 |
| FauI | CCCGC | 1 cut(s) | 211 |
| FbaI | TGATCA | 1 cut(s) | 6 |
| Fnu4HI | GCNGC | 2 cut(s) | 212, 1071 |
| FokI | GGATG | 4 cut(s) | 730, 864, 938, 1079 |
| FriOI | GRGCYC | 1 cut(s) | 629 |
| Fsp4HI | GCNGC | 2 cut(s) | 212, 1071 |
| FspBI | CTAG | 2 cut(s) | 380, 585 |
| GlaI | GCGC | 1 cut(s) | 998 |
| GluI | GCNGC | 2 cut(s) | 212, 1071 |
| GsaI | CCCAGC | 1 cut(s) | 1224 |
| GsuI | CTGGAG | 1 cut(s) | 1281 |
| HaeII | RGCGCY | 1 cut(s) | 1000 |
| HaeIII | GGCC | 5 cut(s) | 627, 1057, 1184, 1287, 1299 |
| HapII | CCGG | 2 cut(s) | 260, 420 |
| HgaI | GACGC | 1 cut(s) | 203 |
| HhaI | GCGC | 1 cut(s) | 999 |
| Hin1I | GRCGYC | 1 cut(s) | 997 |
| Hin6I | GCGC | 1 cut(s) | 997 |
| HinP1I | GCGC | 1 cut(s) | 997 |
| HindIII | AAGCTT | 1 cut(s) | 196 |
| HinfI | GANTC | 5 cut(s) | 117, 123, 308, 704, 889 |
| HpaII | CCGG | 2 cut(s) | 260, 420 |
| HphI | GGTGA | 2 cut(s) | 16, 1027 |
| Hpy166II | GTNNAC | 1 cut(s) | 1049 |
| Hpy188III | TCNNGA | 5 cut(s) | 250, 387, 512, 1061, 1274 |
| Hpy8I | GTNNAC | 1 cut(s) | 1049 |
| Hpy99I | CGWCG | 2 cut(s) | 105, 448 |
| HpyAV | CCTTC | 4 cut(s) | 310, 637, 836, 854 |
| HpyCH4III | ACNGT | 4 cut(s) | 76, 448, 1053, 1126 |
| HpyCH4IV | ACGT | 1 cut(s) | 1169 |
| HpyCH4V | TGCA | 7 cut(s) | 688, 700, 748, 908, 949, 1013, 1070 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 791, 1231 |
| HpyF3I | CTNAG | 6 cut(s) | 291, 344, 630, 975, 1059, 1155 |
| HpySE526I | ACGT | 1 cut(s) | 1169 |
| Hsp92I | GRCGYC | 1 cut(s) | 997 |
| HspAI | GCGC | 1 cut(s) | 997 |
| KasI | GGCGCC | 1 cut(s) | 996 |
| Ksp22I | TGATCA | 1 cut(s) | 6 |
| Kzo9I | GATC | 3 cut(s) | 6, 1149, 1276 |
| LguI | GCTCTTC | 2 cut(s) | 1137, 1224 |
| LmnI | GCTCC | 2 cut(s) | 685, 1262 |
| Lsp1109I | GCAGC | 2 cut(s) | 198, 1082 |
| LweI | GCATC | 4 cut(s) | 215, 599, 1057, 1213 |
| MaeI | CTAG | 2 cut(s) | 380, 585 |
| MaeII | ACGT | 1 cut(s) | 1169 |
| MaeIII | GTNAC | 4 cut(s) | 301, 763, 1033, 1105 |
| MalI | GATC | 3 cut(s) | 8, 1151, 1278 |
| MboI | GATC | 3 cut(s) | 6, 1149, 1276 |
| MboII | GAAGA | 7 cut(s) | 32, 35, 892, 1001, 1154, 1199, 1241 |
| MfeI | CAATTG | 1 cut(s) | 950 |
| MhlI | GDGCHC | 2 cut(s) | 567, 629 |
| MlsI | TGGCCA | 1 cut(s) | 1299 |
| MluCI | AATT | 8 cut(s) | 218, 324, 369, 507, 727, 950, 1002, 1099 |
| MluNI | TGGCCA | 1 cut(s) | 1299 |
| Mly113I | GGCGCC | 1 cut(s) | 997 |
| MlyI | GAGTC | 2 cut(s) | 111, 117 |
| MmeI | TCCRAC | 4 cut(s) | 139, 145, 151, 850 |
| Mox20I | TGGCCA | 1 cut(s) | 1299 |
| MscI | TGGCCA | 1 cut(s) | 1299 |
| MseI | TTAA | 1 cut(s) | 194 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1044, 1209, 1215, 1239, 1245, 1251 |
| Msp20I | TGGCCA | 1 cut(s) | 1299 |
| MspA1I | CMGCKG | 1 cut(s) | 290 |
| MspI | CCGG | 2 cut(s) | 260, 420 |
| MspR9I | CCNGG | 3 cut(s) | 260, 420, 468 |
| MunI | CAATTG | 1 cut(s) | 950 |
| MvaI | CCWGG | 1 cut(s) | 468 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 791, 1231 |
| NarI | GGCGCC | 1 cut(s) | 997 |
| NciI | CCSGG | 2 cut(s) | 260, 420 |
| NdeII | GATC | 3 cut(s) | 6, 1149, 1276 |
| NlaIV | GGNNCC | 5 cut(s) | 385, 564, 627, 681, 998 |
| NmuCI | GTSAC | 2 cut(s) | 763, 1033 |
| NspI | RCATGY | 1 cut(s) | 1250 |
| NspV | TTCGAA | 1 cut(s) | 725 |
| PaqCI | CACCTGC | 1 cut(s) | 550 |
| PciI | ACATGT | 1 cut(s) | 1246 |
| PciSI | GCTCTTC | 2 cut(s) | 1137, 1224 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 440 |
| PfeI | GAWTC | 3 cut(s) | 308, 704, 889 |
| Pfl23II | CGTACG | 1 cut(s) | 1281 |
| PkrI | GCNGC | 2 cut(s) | 213, 1072 |
| PleI | GAGTC | 2 cut(s) | 111, 117 |
| PluTI | GGCGCC | 1 cut(s) | 1000 |
| PpsI | GAGTC | 2 cut(s) | 111, 117 |
| PscI | ACATGT | 1 cut(s) | 1246 |
| PsiI | TTATAA | 1 cut(s) | 323 |
| Psp6I | CCWGG | 1 cut(s) | 466 |
| PspFI | CCCAGC | 1 cut(s) | 1220 |
| PspGI | CCWGG | 1 cut(s) | 466 |
| PspLI | CGTACG | 1 cut(s) | 1281 |
| PspN4I | GGNNCC | 5 cut(s) | 385, 564, 627, 681, 998 |
| PspOMI | GGGCCC | 1 cut(s) | 625 |
| PspPI | GGNCC | 4 cut(s) | 247, 262, 625, 626 |
| PvuII | CAGCTG | 1 cut(s) | 290 |
| RsaI | GTAC | 1 cut(s) | 1283 |
| RsaNI | GTAC | 1 cut(s) | 1282 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1044, 1209, 1215, 1239, 1245, 1251 |
| SapI | GCTCTTC | 2 cut(s) | 1137, 1224 |
| SaqAI | TTAA | 1 cut(s) | 194 |
| SatI | GCNGC | 2 cut(s) | 212, 1071 |
| Sau3AI | GATC | 3 cut(s) | 6, 1149, 1276 |
| Sau96I | GGNCC | 4 cut(s) | 247, 262, 625, 626 |
| SchI | GAGTC | 2 cut(s) | 111, 117 |
| ScrFI | CCNGG | 3 cut(s) | 260, 420, 468 |
| SduI | GDGCHC | 2 cut(s) | 567, 629 |
| SfaNI | GCATC | 4 cut(s) | 215, 599, 1057, 1213 |
| SfoI | GGCGCC | 1 cut(s) | 998 |
| SfuI | TTCGAA | 1 cut(s) | 725 |
| SinI | GGWCC | 2 cut(s) | 247, 262 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1044, 1209, 1215, 1239, 1245, 1251 |
| Sse9I | AATT | 8 cut(s) | 218, 324, 369, 507, 727, 950, 1002, 1099 |
| SsiI | CCGC | 2 cut(s) | 204, 270 |
| SspDI | GGCGCC | 1 cut(s) | 996 |
| SspMI | CTAG | 2 cut(s) | 380, 585 |
| StyD4I | CCNGG | 3 cut(s) | 258, 418, 466 |
| StyI | CCWWGG | 3 cut(s) | 228, 379, 1288 |
| TaaI | ACNGT | 4 cut(s) | 76, 448, 1053, 1126 |
| TaiI | ACGT | 1 cut(s) | 1172 |
| TaqI | TCGA | 3 cut(s) | 443, 593, 725 |
| TasI | AATT | 8 cut(s) | 218, 324, 369, 507, 727, 950, 1002, 1099 |
| TfiI | GAWTC | 3 cut(s) | 308, 704, 889 |
| Tru1I | TTAA | 1 cut(s) | 194 |
| Tru9I | TTAA | 1 cut(s) | 194 |
| TscAI | CASTG | 1 cut(s) | 774 |
| TseFI | GTSAC | 2 cut(s) | 763, 1033 |
| TseI | GCWGC | 2 cut(s) | 211, 1070 |
| Tsp45I | GTSAC | 2 cut(s) | 763, 1033 |
| TspDTI | ATGAA | 6 cut(s) | 320, 386, 1092, 1199, 1241, 1242 |
| TspGWI | ACGGA | 3 cut(s) | 89, 98, 1269 |
| TspRI | CASTG | 1 cut(s) | 774 |
| VpaK11BI | GGWCC | 2 cut(s) | 247, 262 |
| XapI | RAATTY | 1 cut(s) | 507 |
| XceI | RCATGY | 1 cut(s) | 1250 |
| XmaJI | CCTAGG | 1 cut(s) | 379 |
| XspI | CTAG | 2 cut(s) | 380, 585 |