Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0006337

Physical Location & Seq

Genomic Coordinates Forward (+)

29640866 .. 29646170

Gene Structure 5305 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1218900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2928 bp

ATGGCGGCGATAGGGAAGACGATTCTGGACTCGGGGTGGATCGGCACCAGGGACAGGGAAGTCACCGTCACTGGTACCCAGCTCACCACCACCCACCCTCCCTCCCCCGCCCTTCCTTGGATGGAGGCCGTCGTTCCCGGAACTGTTCTGGCAACCTTGGTGAAGGGGAAAGATGTACCCGATCCTTTCTACGCATTGCAAAACGACTACATTATAGACATTTCTGACTCCGGGAGGCAGTACTATACATTTTGGCTCTTTACAACTTTTCGGTGTAATCTGTCAAGCACACAGTTTGTGGATCTGAATTTCCGCGCAATCAATTACTATGCCGAGGTGTATCTAAATGGGCACAGAAAAGACCTGCCAAGAGGGATGTTTCAAAGGCATTCTCTTGACGTCACTGATATAGTGCTTCCCAATGCTCAGAATTTGCTTGCTATTCGTGTTTATCCCCCGGATAATCCAGGGACTATTCCTCCTGAGGGAGGGCAGGGTGGCGATCACGAGATAGGGAAAGATGTAGCTGCACAATATGTGGAGGGTTGGGATTGGATGTGTCCTATAAGGGATAGAAACACGGGCATATGGGACGAGGTGTCAATTTCTGTAACAGGGCCAGTAAAAATAATTGATCCGCACTTGGTTTCATCGTTTTTTGACAACTACAAGAGGTTGTATTTGCATGCTACAACTGAGTTGGAAAATAGAAGTGCCTCGGTTGTTGAGTGTTCTTTGAATATCCAAGTAACAACAGAACTTGAAGGAAACGTTTGCTTAGTAGAGCATCTTCAGACTCAACATTTGTCAATCCCTGCTGGATCACGGGTGAAATATACATTTCCTGAGCTCTTCTTCTACAAGCCGAATTTATGGTGGCCAAATGGTATGGGAAAGCAATCCTTGTACAATGTTGACATTACTGTTGATGTGAAGGGATACGGAGAATCTGATTTGTGGAACCAATTATTTGGATTCCGCAAAATTGAGAGCCACATTGATACTGCCACTGGTGGGAGGTTGTTCAAGGTCAATGGTCAGCCTATTTTTATTCGTGGTGGTAATTGGACAGTGTCAGATGGCCTCCTTCGACTTTCAAAAGAGCGCTACAGAACAGCCATCAAGTTTCATGCTGATATGAATTTGAACATGCTACGCTGTTGGGGCGGTGGAGTGGCTGAGAGGCCAGAATTTTATCATTACTGTGATATTTATGGTCTGCTGGTCTGGCAAGAGTTTTGGATTACTGGAGATGTCAACGGACGAGGTAAACCAGTATCAAATCTAAATGGTCCACTGGACCATGATCTTTTCTTGCTATGTGCGAGAGATACTATCAGGCTTCTAAGGAACCATCCAAGTCTTGTCCTTTGGGTGGGTGGAAATGAACAAATTCCACCAGACGATATCAACACAGCTTTGAAACACGACCTCAGGCTCCATCCATATTTCGAAAACTCTTCAAATGAGAGTGGCAAGATTGTTGAAAACTTGTCCCTGACTTCAGAGGATCCAAGCCAATATCTTGATGGTACACGCATTTACATTCAAGGGTCCTTGTGGGATGGATTTGCAAATGGAAAGGGAGGCTTCACCGCTGGCCCTTATGAAATCCAAAATCCCGAAGACTTCTTTAAAGATGGGTTTTACCAATATGGGTTCAATCCTGCAGTTGGTTCTGTAGGCACACCAGTTGCAGCTACCATCAGAGCGGCAATGCCTCCAGAAGCATGGCATATTCCGTTGTTTAAGAAGGTTTCAAATGGTTATGAAGAAGTTCCAAACGGCATGTGGGTACATTTTAAGTACAAGCCTTATTCAAATCCAGGCAAGGTTCATGATCAGATTTTGCTTTATGGGTCGCCGAAAGATCTTGATGATTTTTGCTTAAAGGCTCAACTAGCTAACTACATCCAGTATAAAGCTCTATTGGAGGGGTGGACTTCCCGAATGTGGACTAAATACACTGGTGTTTTGATTTGGAAAACACAAAATCCGTGGCCAGGTCTTAGAGGTCAACTTTACGATCACTTTTTGGACCAAACTGCAGGTTTCTATGGCTGTCGCTGTGCTGCTGAGCCAATACATGTCCAGCTTAACTTAGCTACATATTTTATAGAGGTTGTCAACACTACATCAGAGGAGCTATCCGACATCGCTATAGAAGCCTTGGTGTGGGATCTAGAAGGAACATGCCCATACTACAAAGTTCACGAAAAGGTGTCAATGCCACCGAAAAGAACAGTACCGATTGCTGAGATGAAATATCCAAAATCTAAAAACCCAAGGCCGGTTTACTTTCTTCTTCTCAAGCTGTATCACAAGTCAGATTATCGCATTATTTCCAGGAACTTTTACTGGTTGCATCTGTCTGGTGGGGATTACAAACTGTTAGAACCATATAGGAAGAAGACAGTACCACTCAAGGTTACATCTCAGGTTTTCATCAAAGGAACCACCTACGAAATGCATATGCACGTGAAGAACACATCTAAGAAACCAGAGCCAAAAAGTTTGACCTTTCAAAACAATTTCACTACTAATCAAGGTGATGGCAATTTCGATGTAGCGTTGGTGAAAGCTACACATGATGGAGCAGACAGAAAACTTGAAGTTGGCTGGTTTCATAAAATATCCAGACATTTCACAAAGGAGACTGATGGTTTGAGGGTTGCTGAAATCAACGGCGCCAACATAGGCGTTGCTTTCTTCCTTCATTTTTCTGTACATGGAGTGAAGAAGGACCGTAAGGAAGGAGAAGACACAAGAATCCTTCCGGTTCATTACTCGGACAACTATTTTTCACTGGTGCCAGGTGAGGCTATGTCGATAAAGATCTCCTTCGAGGTCCCTCCCGGTGTCATCCCTCGAGTTACTCTCGACGGATGGAATTACCATGGTGTCCATACAGTCCATTCATTTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_2 Glyco_hydro_2_C

Protein Analysis

976

Amino Acids

110.7

Weight (kDa)

6.51

Isoelectric Point (pI)

30.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_2_N2	PF22666	35 - 197	1e-17	Glycosyl hydrolase 2 galactose-binding domain-like
Glyco_hydro_2	PF00703	209 - 327	7.6e-10	Glycosyl hydrolases family 2
Ig_GlcNase	PF18368	900 - 964	3e-09	Exo-beta-D-glucosaminidase Ig-fold domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09010
fragaria_vesca	FvH4_6g05900 FvH4_6g05900 FvH4_6g05900 FvH4_6g05900 FvH4_6g05900 FvH4_6g05900
malus_domestica	MD12G1218800.v1.1 MD12G1218900.v1.1
prunus_persica	Prupe.6G325300_v2.0.a1 Prupe.6G325300_v2.0.a1 Prupe.6G325400_v2.0.a1
pyrus_communis	pycom12g20450 pycom12g20460
rosa_chinensis	RchiOBHm_Chr3g0454891
rosa_laevigata	RLG00000025403
rosa_multiflora	Rmu_sc0001792.1_g000010 Rmu_sc0013126.1_g000001 Rmu_sc0036267.1_g000001
rosa_roxburghii	Rroxscaffold_6G00424690
rosa_rugosa	Rorug03G0002800 Rorug03G0002800
rosa_samantha	Rh3AG062700 Rh3BG064600 Rh3CG063500 Rh3DG064600
rosa_wichuraiana	Rw3G004900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	59
AatII	GACGTC	1 cut(s)	402
Acc36I	ACCTGC	2 cut(s)	372, 2039
Acc65I	GGTACC	1 cut(s)	74
AccB1I	GGYRCC	4 cut(s)	44, 74, 2687, 2809
AccBSI	CCGCTC	1 cut(s)	1712
AccII	CGCG	1 cut(s)	315
AciI	CCGC	8 cut(s)	5, 108, 313, 638, 979, 1167, 1596, 1712
AclI	AACGTT	1 cut(s)	771
AclWI	GGATC	8 cut(s)	47, 176, 309, 629, 829, 1505, 1518, 2187
AcoI	YGGCCR	2 cut(s)	878, 2000
AcsI	RAATTY	6 cut(s)	307, 430, 868, 1141, 1190, 1392
AcuI	CTGAAG	2 cut(s)	776, 1488
AcvI	CACGTG	1 cut(s)	2479
AcyI	GRCGYC	2 cut(s)	399, 2688
AfeI	AGCGCT	1 cut(s)	1106
AflIII	ACRYGT	1 cut(s)	2086
AhdI	GACNNNNNGTC	1 cut(s)	598
AjnI	CCWGG	6 cut(s)	47, 466, 1825, 2002, 2345, 2812
Alw21I	GWGCWC	1 cut(s)	852
Alw26I	GTCTC	1 cut(s)	2648
AlwI	GGATC	8 cut(s)	47, 176, 309, 629, 829, 1505, 1518, 2187
Ama87I	CYCGRG	2 cut(s)	31, 2868
Aor51HI	AGCGCT	1 cut(s)	1106
AoxI	GGCC	8 cut(s)	126, 617, 878, 1081, 1184, 1600, 2000, 2288
ApeKI	GCWGC	3 cut(s)	527, 1697, 2072
ApoI	RAATTY	6 cut(s)	307, 430, 868, 1141, 1190, 1392
ArsI	GACNNNNNNTTYG	4 cut(s)	787, 819, 2647, 2679
Asp700I	GAANNNNTTC	2 cut(s)	1392, 1776
Asp718I	GGTACC	1 cut(s)	74
AspLEI	GCGC	3 cut(s)	317, 1107, 2690
AspS9I	GGNCC	8 cut(s)	617, 1292, 1300, 1554, 1601, 2038, 2743, 2848
AsuC2I	CCSGG	4 cut(s)	138, 232, 458, 2856
AsuHPI	GGTGA	8 cut(s)	55, 76, 172, 841, 1585, 2561, 2587, 2828
AsuII	TTCGAA	1 cut(s)	1452
AvaI	CYCGRG	2 cut(s)	31, 2868
AvaII	GGWCC	6 cut(s)	1292, 1300, 1554, 2038, 2743, 2848
AxyI	CCTNAGG	2 cut(s)	483, 1433
BaeGI	GKGCMC	1 cut(s)	354
BalI	TGGCCA	2 cut(s)	880, 2002
BamHI	GGATCC	1 cut(s)	1510
BanI	GGYRCC	4 cut(s)	44, 74, 2687, 2809
BanII	GRGCYC	1 cut(s)	852
BarI	GAAGNNNNNNTAC	2 cut(s)	774, 806
BauI	CACGAG	1 cut(s)	506
BbrPI	CACGTG	1 cut(s)	2479
BbsI	GAAGAC	4 cut(s)	23, 1632, 2417, 2766
Bbv12I	GWGCWC	1 cut(s)	852
BbvI	GCAGC	3 cut(s)	514, 1709, 2059
BceAI	ACGGC	3 cut(s)	113, 1801, 2701
BciT130I	CCWGG	6 cut(s)	49, 468, 1827, 2004, 2347, 2814
BciVI	GTATCC	1 cut(s)	932
BclI	TGATCA	1 cut(s)	1840
BcnI	CCSGG	4 cut(s)	138, 232, 458, 2856
BcoDI	GTCTC	1 cut(s)	2648
BfaI	CTAG	2 cut(s)	1901, 2183
BfmI	CTRYAG	5 cut(s)	1108, 1668, 1680, 2046, 2160
BfoI	RGCGCY	2 cut(s)	1108, 2691
BfuAI	ACCTGC	2 cut(s)	372, 2039
BfuI	GTATCC	1 cut(s)	932
BglII	AGATCT	2 cut(s)	1870, 2835
BisI	GCNGC	5 cut(s)	6, 528, 1698, 1713, 2073
BlpI	GCTNAGC	1 cut(s)	2076
BlsI	GCNGC	5 cut(s)	7, 529, 1699, 1714, 2074
BmcAI	AGTACT	1 cut(s)	242
Bme18I	GGWCC	6 cut(s)	1292, 1300, 1554, 2038, 2743, 2848
BmeRI	GACNNNNNGTC	1 cut(s)	598
BmeT110I	CYCGRG	2 cut(s)	31, 2868
BmgT120I	GGNCC	8 cut(s)	617, 1292, 1300, 1554, 1601, 2038, 2743, 2848
BmsI	GCATC	2 cut(s)	796, 2374
BpiI	GAAGAC	4 cut(s)	23, 1632, 2417, 2766
BplI	GAGNNNNNCTC	2 cut(s)	2862, 2894
BpmI	CTGGAG	2 cut(s)	1269, 1707
Bpu10I	CCTNAGC	1 cut(s)	846
Bpu1102I	GCTNAGC	1 cut(s)	2076
Bpu14I	TTCGAA	1 cut(s)	1452
BpuEI	CTTGAG	2 cut(s)	2294, 2408
BpuMI	CCSGG	4 cut(s)	138, 232, 458, 2856
BsaAI	YACGTR	1 cut(s)	2479
BsaBI	GATNNNNATC	1 cut(s)	2834
BsaHI	GRCGYC	2 cut(s)	399, 2688
BsaWI	WCCGGW	1 cut(s)	2776
BsaXI	ACNNNNNCTCC	6 cut(s)	82, 86, 112, 116, 463, 493
Bse118I	RCCGGY	1 cut(s)	2290
Bse21I	CCTNAGG	2 cut(s)	483, 1433
Bse3DI	GCAATG	2 cut(s)	194, 1722
Bse8I	GATNNNNATC	1 cut(s)	2834
BseBI	CCWGG	6 cut(s)	49, 468, 1827, 2004, 2347, 2814
BseGI	GGATG	9 cut(s)	126, 381, 561, 1354, 1441, 1570, 1911, 2862, 2891
BseJI	GATNNNNATC	1 cut(s)	2834
BseMI	GCAATG	2 cut(s)	194, 1722
BseMII	CTCAG	9 cut(s)	440, 474, 687, 837, 1170, 1447, 2067, 2247, 2450
BseRI	GAGGAG	1 cut(s)	2156
BseSI	GKGCMC	1 cut(s)	354
BseXI	GCAGC	3 cut(s)	514, 1709, 2059
BseYI	CCCAGC	1 cut(s)	78
BsgI	GTGCAG	1 cut(s)	513
Bsh1236I	CGCG	1 cut(s)	315
BshFI	GGCC	8 cut(s)	128, 619, 880, 1083, 1186, 1602, 2002, 2290
BshNI	GGYRCC	4 cut(s)	44, 74, 2687, 2809
BsiHKAI	GWGCWC	1 cut(s)	852
BsiHKCI	CYCGRG	2 cut(s)	31, 2868
BsiSI	CCGG	6 cut(s)	138, 231, 458, 2291, 2777, 2856
BslFI	GGGAC	5 cut(s)	65, 484, 605, 1480, 2834
BsmAI	GTCTC	1 cut(s)	2648
BsmFI	GGGAC	5 cut(s)	65, 484, 605, 1480, 2834
BsmI	GAATGC	1 cut(s)	388
BsnI	GGCC	8 cut(s)	128, 619, 880, 1083, 1186, 1602, 2002, 2290
BsoBI	CYCGRG	2 cut(s)	31, 2868
Bsp119I	TTCGAA	1 cut(s)	1452
Bsp1286I	GDGCHC	2 cut(s)	354, 852
Bsp1407I	TGTACA	2 cut(s)	906, 2725
Bsp1720I	GCTNAGC	1 cut(s)	2076
Bsp19I	CCATGG	1 cut(s)	2896
BspACI	CCGC	8 cut(s)	5, 108, 313, 638, 979, 1167, 1596, 1712
BspANI	GGCC	8 cut(s)	128, 619, 880, 1083, 1186, 1602, 2002, 2290
BspCNI	CTCAG	9 cut(s)	439, 475, 688, 838, 1171, 1446, 2068, 2248, 2449
BspFNI	CGCG	1 cut(s)	315
BspHI	TCATGA	1 cut(s)	1837
BspMAI	CTGCAG	2 cut(s)	1672, 2050
BspMI	ACCTGC	2 cut(s)	372, 2039
BspPI	GGATC	8 cut(s)	47, 176, 309, 629, 829, 1505, 1518, 2187
BspQI	GCTCTTC	1 cut(s)	857
BspT104I	TTCGAA	1 cut(s)	1452
BspT107I	GGYRCC	4 cut(s)	44, 74, 2687, 2809
BsrBI	CCGCTC	1 cut(s)	1712
BsrDI	GCAATG	2 cut(s)	194, 1722
BsrFI	RCCGGY	1 cut(s)	2290
BsrGI	TGTACA	2 cut(s)	906, 2725
BssAI	RCCGGY	1 cut(s)	2290
BssNI	GRCGYC	2 cut(s)	399, 2688
BssSI	CACGAG	1 cut(s)	506
BssT1I	CCWWGG	5 cut(s)	116, 156, 2169, 2285, 2896
Bst2BI	CACGAG	1 cut(s)	506
Bst2UI	CCWGG	6 cut(s)	49, 468, 1827, 2004, 2347, 2814
Bst6I	CTCTTC	2 cut(s)	857, 1465
BstACI	GRCGYC	2 cut(s)	399, 2688
BstAUI	TGTACA	2 cut(s)	906, 2725
BstBAI	YACGTR	1 cut(s)	2479
BstBI	TTCGAA	1 cut(s)	1452
BstC8I	GCNNGC	3 cut(s)	438, 687, 1600
BstDSI	CCRYGG	2 cut(s)	1997, 2896
BstENI	CCTNNNNNAGG	1 cut(s)	486
BstF5I	GGATG	9 cut(s)	126, 381, 561, 1354, 1441, 1570, 1911, 2862, 2891
BstFNI	CGCG	1 cut(s)	315
BstH2I	RGCGCY	2 cut(s)	1108, 2691
BstHHI	GCGC	3 cut(s)	317, 1107, 2690
BstMAI	GTCTC	1 cut(s)	2648
BstMWI	GCNNNNNNNGC	4 cut(s)	1164, 1228, 1901, 2165
BstNI	CCWGG	6 cut(s)	49, 468, 1827, 2004, 2347, 2814
BstNSI	RCATGY	5 cut(s)	689, 1153, 1792, 2090, 2196
BstSFI	CTRYAG	5 cut(s)	1108, 1668, 1680, 2046, 2160
BstSLI	GKGCMC	1 cut(s)	354
BstUI	CGCG	1 cut(s)	315
BstV1I	GCAGC	3 cut(s)	514, 1709, 2059
BstV2I	GAAGAC	4 cut(s)	23, 1632, 2417, 2766
BstX2I	RGATCY	5 cut(s)	301, 1510, 1870, 2179, 2835
BstXI	CCANNNNNNTGG	3 cut(s)	971, 1731, 2921
BstYI	RGATCY	5 cut(s)	301, 1510, 1870, 2179, 2835
Bsu36I	CCTNAGG	2 cut(s)	483, 1433
BsuI	GTATCC	1 cut(s)	932
BsuRI	GGCC	8 cut(s)	128, 619, 880, 1083, 1186, 1602, 2002, 2290
BtgI	CCRYGG	2 cut(s)	1997, 2896
BtgZI	GCGATG	1 cut(s)	2140
BtsCI	GGATG	9 cut(s)	126, 381, 561, 1354, 1441, 1570, 1911, 2862, 2891
BtsIMutI	CAGTG	7 cut(s)	69, 402, 1008, 1077, 1295, 1965, 2804
BveI	ACCTGC	2 cut(s)	372, 2039
Cac8I	GCNNGC	3 cut(s)	438, 687, 1600
CciI	TCATGA	1 cut(s)	1837
CfoI	GCGC	3 cut(s)	317, 1107, 2690
Cfr10I	RCCGGY	1 cut(s)	2290
Cfr13I	GGNCC	8 cut(s)	617, 1292, 1300, 1554, 1601, 2038, 2743, 2848
CspCI	CAANNNNNGTGG	2 cut(s)	1979, 2014
DinI	GGCGCC	1 cut(s)	2689
DraI	TTTAAA	1 cut(s)	1636
DrdI	GACNNNNNNGTC	1 cut(s)	59
DriI	GACNNNNNGTC	1 cut(s)	598
DseDI	GACNNNNNNGTC	1 cut(s)	59
EaeI	YGGCCR	2 cut(s)	878, 2000
Eam1104I	CTCTTC	2 cut(s)	857, 1465
Eam1105I	GACNNNNNGTC	1 cut(s)	598
EarI	CTCTTC	2 cut(s)	857, 1465
Ecl136II	GAGCTC	1 cut(s)	850
Eco130I	CCWWGG	5 cut(s)	116, 156, 2169, 2285, 2896
Eco24I	GRGCYC	1 cut(s)	852
Eco32I	GATATC	1 cut(s)	1408
Eco47I	GGWCC	6 cut(s)	1292, 1300, 1554, 2038, 2743, 2848
Eco47III	AGCGCT	1 cut(s)	1106
Eco53kI	GAGCTC	1 cut(s)	850
Eco57I	CTGAAG	2 cut(s)	776, 1488
Eco72I	CACGTG	1 cut(s)	2479
Eco81I	CCTNAGG	2 cut(s)	483, 1433
Eco88I	CYCGRG	2 cut(s)	31, 2868
EcoICRI	GAGCTC	1 cut(s)	850
EcoNI	CCTNNNNNAGG	1 cut(s)	486
EcoO109I	RGGNCCY	2 cut(s)	1554, 2848
EcoRII	CCWGG	6 cut(s)	47, 466, 1825, 2002, 2345, 2812
EcoRV	GATATC	1 cut(s)	1408
EcoT14I	CCWWGG	5 cut(s)	116, 156, 2169, 2285, 2896
EcoT22I	ATGCAT	1 cut(s)	2472
EcoT38I	GRGCYC	1 cut(s)	852
EgeI	GGCGCC	1 cut(s)	2689
EheI	GGCGCC	1 cut(s)	2689
ErhI	CCWWGG	5 cut(s)	116, 156, 2169, 2285, 2896
FalI	AAGNNNNNCTT	6 cut(s)	887, 919, 1574, 1606, 2825, 2857
FaqI	GGGAC	5 cut(s)	65, 484, 605, 1480, 2834
FauI	CCCGC	1 cut(s)	115
FauNDI	CATATG	2 cut(s)	587, 2472
FbaI	TGATCA	1 cut(s)	1840
Fnu4HI	GCNGC	5 cut(s)	6, 528, 1698, 1713, 2073
FokI	GGATG	9 cut(s)	133, 388, 568, 1341, 1428, 1577, 1898, 2849, 2898
FriOI	GRGCYC	1 cut(s)	852
Fsp4HI	GCNGC	5 cut(s)	6, 528, 1698, 1713, 2073
FspBI	CTAG	2 cut(s)	1901, 2183
GlaI	GCGC	3 cut(s)	316, 1106, 2689
GluI	GCNGC	5 cut(s)	6, 528, 1698, 1713, 2073
GsaI	CCCAGC	1 cut(s)	82
GsuI	CTGGAG	2 cut(s)	1269, 1707
HaeII	RGCGCY	2 cut(s)	1108, 2691
HaeIII	GGCC	8 cut(s)	128, 619, 880, 1083, 1186, 1602, 2002, 2290
HapII	CCGG	6 cut(s)	138, 231, 458, 2291, 2777, 2856
HhaI	GCGC	3 cut(s)	317, 1107, 2690
Hin1I	GRCGYC	2 cut(s)	399, 2688
Hin6I	GCGC	3 cut(s)	315, 1105, 2688
HinP1I	GCGC	3 cut(s)	315, 1105, 2688
HincII	GTYRAC	4 cut(s)	916, 1258, 2018, 2128
HindII	GTYRAC	4 cut(s)	916, 1258, 2018, 2128
HinfI	GANTC	7 cut(s)	22, 29, 227, 796, 947, 975, 2769
HpaII	CCGG	6 cut(s)	138, 231, 458, 2291, 2777, 2856
HphI	GGTGA	8 cut(s)	55, 76, 172, 841, 1585, 2561, 2587, 2828
Hpy99I	CGWCG	2 cut(s)	134, 2885
HpyCH4IV	ACGT	3 cut(s)	399, 771, 2478
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1164, 1228, 1901, 2165
HpySE526I	ACGT	3 cut(s)	399, 771, 2478
Hsp92I	GRCGYC	2 cut(s)	399, 2688
HspAI	GCGC	3 cut(s)	315, 1105, 2688
KasI	GGCGCC	1 cut(s)	2687
KpnI	GGTACC	1 cut(s)	78
Ksp22I	TGATCA	1 cut(s)	1840
LguI	GCTCTTC	1 cut(s)	857
LmnI	GCTCC	3 cut(s)	1443, 2143, 2594
Lsp1109I	GCAGC	3 cut(s)	514, 1709, 2059
LweI	GCATC	2 cut(s)	796, 2374
MaeI	CTAG	2 cut(s)	1901, 2183
MaeII	ACGT	3 cut(s)	399, 771, 2478
MaeIII	GTNAC	7 cut(s)	61, 67, 400, 610, 748, 2428, 2872
MbiI	CCGCTC	1 cut(s)	1712
MflI	RGATCY	5 cut(s)	301, 1510, 1870, 2179, 2835
MhlI	GDGCHC	2 cut(s)	354, 852
MlsI	TGGCCA	2 cut(s)	880, 2002
MluNI	TGGCCA	2 cut(s)	880, 2002
Mly113I	GGCGCC	1 cut(s)	2688
MlyI	GAGTC	3 cut(s)	23, 221, 790
MmeI	TCCRAC	2 cut(s)	681, 2175
Mox20I	TGGCCA	2 cut(s)	880, 2002
Mph1103I	ATGCAT	1 cut(s)	2472
MroXI	GAANNNNTTC	2 cut(s)	1392, 1776
MscI	TGGCCA	2 cut(s)	880, 2002
MseI	TTAA	6 cut(s)	1635, 1749, 1803, 1889, 2097, 2926
MslI	CAYNNNNRTG	1 cut(s)	1203
Msp20I	TGGCCA	2 cut(s)	880, 2002
MspA1I	CMGCKG	1 cut(s)	1598
MspI	CCGG	6 cut(s)	138, 231, 458, 2291, 2777, 2856
Mva1269I	GAATGC	1 cut(s)	388
MvaI	CCWGG	6 cut(s)	49, 468, 1827, 2004, 2347, 2814
MvnI	CGCG	1 cut(s)	315
MwoI	GCNNNNNNNGC	4 cut(s)	1164, 1228, 1901, 2165
NarI	GGCGCC	1 cut(s)	2688
NciI	CCSGG	4 cut(s)	138, 232, 458, 2856
NcoI	CCATGG	1 cut(s)	2896
NdeI	CATATG	2 cut(s)	587, 2472
NmeAIII	GCCGAG	1 cut(s)	358
NmuCI	GTSAC	3 cut(s)	61, 67, 400
NsiI	ATGCAT	1 cut(s)	2472
NspI	RCATGY	5 cut(s)	689, 1153, 1792, 2090, 2196
NspV	TTCGAA	1 cut(s)	1452
PaeI	GCATGC	1 cut(s)	689
PaeR7I	CTCGAG	1 cut(s)	2868
PagI	TCATGA	1 cut(s)	1837
PciI	ACATGT	1 cut(s)	2086
PciSI	GCTCTTC	1 cut(s)	857
PctI	GAATGC	1 cut(s)	388
PdmI	GAANNNNTTC	2 cut(s)	1392, 1776
PfeI	GAWTC	4 cut(s)	22, 947, 975, 2769
PflFI	GACNNNGTC	1 cut(s)	1072
PfoI	TCCNGGA	3 cut(s)	136, 230, 2345
PkrI	GCNGC	5 cut(s)	7, 529, 1699, 1714, 2074
PleI	GAGTC	3 cut(s)	23, 221, 790
PluTI	GGCGCC	1 cut(s)	2691
PmaCI	CACGTG	1 cut(s)	2479
PmlI	CACGTG	1 cut(s)	2479
PpsI	GAGTC	3 cut(s)	23, 221, 790
Ppu21I	YACGTR	1 cut(s)	2479
PpuMI	RGGWCCY	2 cut(s)	1554, 2848
PscI	ACATGT	1 cut(s)	2086
Psp124BI	GAGCTC	1 cut(s)	852
Psp1406I	AACGTT	1 cut(s)	771
Psp5II	RGGWCCY	2 cut(s)	1554, 2848
Psp6I	CCWGG	6 cut(s)	47, 466, 1825, 2002, 2345, 2812
PspCI	CACGTG	1 cut(s)	2479
PspFI	CCCAGC	1 cut(s)	78
PspGI	CCWGG	6 cut(s)	47, 466, 1825, 2002, 2345, 2812
PspPI	GGNCC	8 cut(s)	617, 1292, 1300, 1554, 1601, 2038, 2743, 2848
PspPPI	RGGWCCY	2 cut(s)	1554, 2848
PspXI	VCTCGAGB	1 cut(s)	2868
PstI	CTGCAG	2 cut(s)	1672, 2050
PsuI	RGATCY	5 cut(s)	301, 1510, 1870, 2179, 2835
PsyI	GACNNNGTC	1 cut(s)	1072
RseI	CAYNNNNRTG	1 cut(s)	1203
SacI	GAGCTC	1 cut(s)	852
SapI	GCTCTTC	1 cut(s)	857
SaqAI	TTAA	6 cut(s)	1635, 1749, 1803, 1889, 2097, 2926
SatI	GCNGC	5 cut(s)	6, 528, 1698, 1713, 2073
Sau96I	GGNCC	8 cut(s)	617, 1292, 1300, 1554, 1601, 2038, 2743, 2848
ScaI	AGTACT	1 cut(s)	242
SchI	GAGTC	3 cut(s)	23, 221, 790
SduI	GDGCHC	2 cut(s)	354, 852
SfaNI	GCATC	2 cut(s)	796, 2374
SfcI	CTRYAG	5 cut(s)	1108, 1668, 1680, 2046, 2160
SfoI	GGCGCC	1 cut(s)	2689
Sfr274I	CTCGAG	1 cut(s)	2868
SfuI	TTCGAA	1 cut(s)	1452
SinI	GGWCC	6 cut(s)	1292, 1300, 1554, 2038, 2743, 2848
SlaI	CTCGAG	1 cut(s)	2868
SmiMI	CAYNNNNRTG	1 cut(s)	1203
SmlI	CTYRAG	3 cut(s)	2309, 2423, 2868
SmoI	CTYRAG	3 cut(s)	2309, 2423, 2868
SphI	GCATGC	1 cut(s)	689
SsiI	CCGC	8 cut(s)	5, 108, 313, 638, 979, 1167, 1596, 1712
SspDI	GGCGCC	1 cut(s)	2687
SspMI	CTAG	2 cut(s)	1901, 2183
SstI	GAGCTC	1 cut(s)	852
StyI	CCWWGG	5 cut(s)	116, 156, 2169, 2285, 2896
TaiI	ACGT	3 cut(s)	402, 774, 2481
TaqI	TCGA	7 cut(s)	1090, 1452, 2562, 2828, 2844, 2869, 2880
TatI	WGTACW	4 cut(s)	240, 906, 1806, 2725
TauI	GCSGC	2 cut(s)	8, 1715
TfiI	GAWTC	4 cut(s)	22, 947, 975, 2769
Tru1I	TTAA	6 cut(s)	1635, 1749, 1803, 1889, 2097, 2926
Tru9I	TTAA	6 cut(s)	1635, 1749, 1803, 1889, 2097, 2926
TscAI	CASTG	7 cut(s)	76, 409, 1015, 1077, 1302, 1972, 2811
TseFI	GTSAC	3 cut(s)	61, 67, 400
TseI	GCWGC	3 cut(s)	527, 1697, 2072
Tsp45I	GTSAC	3 cut(s)	61, 67, 400
TspGWI	ACGGA	5 cut(s)	957, 1275, 1731, 1986, 2898
TspRI	CASTG	7 cut(s)	76, 409, 1015, 1077, 1302, 1972, 2811
Tth111I	GACNNNGTC	1 cut(s)	1072
VpaK11BI	GGWCC	6 cut(s)	1292, 1300, 1554, 2038, 2743, 2848
XagI	CCTNNNNNAGG	1 cut(s)	486
XapI	RAATTY	6 cut(s)	307, 430, 868, 1141, 1190, 1392
XbaI	TCTAGA	1 cut(s)	2182
XceI	RCATGY	5 cut(s)	689, 1153, 1792, 2090, 2196
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1526, 1788
XhoI	CTCGAG	1 cut(s)	2868
XmnI	GAANNNNTTC	2 cut(s)	1392, 1776
XspI	CTAG	2 cut(s)	1901, 2183
ZraI	GACGTC	1 cut(s)	400
ZrmI	AGTACT	1 cut(s)	242
Zsp2I	ATGCAT	1 cut(s)	2472

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.