Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0006337

Physical Location & Seq

Genomic Coordinates Forward (+)

21961673 .. 21966952

Gene Structure 5280 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g20460.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2916 bp

ATGGCGGCGATAGGGAAGACGATTCTGGACTCGGGGTGGATCGGCACCAGGGACAGGGAAGTCACCGCCACTGGGACCCAGCTCACCACCACCCACCCTCCCTCCCCCGCCCTTCCTTGGATGGAAGCCGTCGTTCCCGGAACTGTTCTGGCAACCTTGGTGAAGGGGAAAGATGTACCCGATCCTTTCTACGCATTGCAAAACGACTACATTACAGACATTTCTGACTCCGGGAGGCAGTACTACACATTCTGGCTCTTTACAACTTTTCGGTGTAATCTGTTTGTGGATCTGAATTTCCGCGCAATCAATTACTATGCCGAGGTGTATCTAAATGGGCACAGAAAAGACCTGCCAAGAGGGATGTTTCAAAGGCATTCTCTTGACGTCACTGATATAGTGCTTCCCAATGCTCAGAATTTGCTTGCTATTCGTGTTTATCCCCCGGATAATCCAGGGACTATTCCTCCTGAGGGAGGGCAGGGTGGCGATCACGAGATAGGGAAAGATGTAGCTGCACAATATGTGGAGGGTTGGGATTGGATGTGTCCTATAAGGGATAGAAACACGGGCATATGGGACGAGGTGTCAATTTCTGTAACAGGGCCAGTAAAAATAATTGATCCGCACTTGGTTTCATCGTTTTTTGACAACTACAAGAGGGTGTATTTGCATGCTACAACTGAGTTGGAAAATAGAAGTGCCTCGGTTGCTGAGTGTTCTTTAAATATCCAAGTAACAACAGAACTTGAAGGAAACGTTTGCTTAGTAGAGCATCTTCAGACTCAACATTTGTCAATCCCTGCTGGATCACGGGTGAAATATACATTTCCTGAGCTCTTCTTTTACAAGCCAAATTTATGGTGGCCAAATGGTATGGGAAAGCAATCCTTGTACAATGTTGACATTACTGTTGATGTGAAGGGATACGGAGAATCTGATTTGTGGAACCAATTATTTGGATTCCGCAAAATTGAGAGCTACATTGATACTGCCACTGGTGGGAGGTTGTTCAAGGTCAATGGTCAGCCTATTTTTATTCGTGGTGGTAATTGGACAGTGTCAGATGGCCTCCTTCGACTTTCAAAAGAGCGCTACAGAACAGCCATCAAGTTTCATGCAGATATGAATTTGAACATGCTACGCTGTTGGGGCGGTGGAGTGGCCGAAAGGCCAGAATTTTATCATTACTGTGATATTTATGGTCTGCTGGTCTGGCAAGAGTTTTGGATTACTGGAGATATCAACGGACGAGGTAAACCAGTATCAAATCTAAATGGTCCACTGGACCATGATCTTTTCTTGCTATGCGCGAGAGATACTATCAGGCTTCTAAGGAACCATCCAAGTCTTGTCCTTTGGGTGGGTGGAAGTGAACAAATTCCACCAGACGACATCAACACAGCTTTGAAACACGACCTCAGGCTCCATCCATATTTTGAAAACTCTTCAAATGAGAGTGGCAAGATTGTTGAAAAGTTGTCCCTGACTTCAGAGGATCCAAGCCAATATCTTGATGGTACACGCATTTACATTCAAGGGTCCTTGTGGGATGGGTTTGCAAATGGAAAGGGGGGCTTCACTGCTGGCCCTTATGCAATCCAAAATCCTGCAGACTTCTTTAAGGATGGGTTTTACCAATATGGGTTCAATCCTGCGGTTGGTTCTGTAGGCACACCAGTTGCAGCTACCATCAGAGCGGCAATGCCTCCAGAAGCATGGCATATTCCTTTGTTTAAGAAGGTTTCAAATGGTTATGAAGAAGTTCCAAACGGCATGTGGGTACACTTTAAGTACAAGCCTTATTCAAATCCGGGCAAGGTTCATGATCAGATTTTGCTTTATGGGTCGCCGAAAGATCTTGATGATTTTTGCTTAAAGGCTCAACTAGCTAACTACACCCAGTATAAAGCTCTATTGGAGGGTTGGACTTCCCGAATGTGGACTAAATACACTGGTGTTTTGATTTGGAAAACACAAAATCCTTGGCCAGGTCTCGGAGGTCAACTTTACGATCACTTTCTAGACCAAACTGCAGGTTTCTATGGCTGTCGCTGCGCTGCTGAGCCAATACATGTCCAACTTAACTTAGCTACATATTTTATAGAGGTTGTCAACACTACATCAGACGAGCTATCTGACATCGCTATAGAAGCCTCGGTGTGGGATCTAGAAGGAACAAGCCCATACTACAAAGTTCACGAAAAGGTGTCAATGCCACCGAAAAGAACAGTACCAATTGCTGAGATGAAATATCCAAAATCTAAAAACCCAAGGCCGGTTTACTTTCTTCTTCTCAAGCTGTATCACAAGTCAGATTATCGCATTATTTCCAGGAACTTTTACTGGTTGCATCTGTCGGGTGGGGATTACAAGCTGTTAGAACCATATAGGAAGAAGACAGTACCACTCAAGGTTACATCTCAGGTTTTCATCAAAGGAAGCACCTACGAAATGCATATGCGTGTGAAGAACACATCTAAGAAACCAGAGCCAAAAAGTTTGACCTTTCAAAACAATTTCACTACTAATCAAGGTGATGGCAATTTCGATGTAGCGCCAGTGGAAGCTACACATGATGGAGCAGACAGAAAACTTGAAGTTGGCTGGTTTCATAAAATATCTAGACATTTCTCAAAGGAGACTGATGGTTTGAGGGTTGCTGAAATCAACAGCGCCAACATAGGCGTTGCTTTCTTCCTTCATTTTTCTGTACATGGAGCGAAGAAGGACCATAAGGAAGGAGAAGACACAAGAATCCTTCCAGTTCATTACTCGGACAACTATTTTTCACTGGTGCCAGGTGAGGCTATGTCGATAAAGATCTCCTTCGAGGTCCCTCCCGGTGTCATCCCTCGAGTTACTCTCGACGGATGGAATTACCATGGTGTCCATACAGTCCATTCATTTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_2 Glyco_hydro_2_C

Protein Analysis

972

Amino Acids

109.91

Weight (kDa)

6.5

Isoelectric Point (pI)

30.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09010
fragaria_vesca	FvH4_6g05900 FvH4_6g05900 FvH4_6g05900 FvH4_6g05900 FvH4_6g05900 FvH4_6g05900
malus_domestica	MD12G1218800.v1.1 MD12G1218900.v1.1
prunus_persica	Prupe.6G325300_v2.0.a1 Prupe.6G325300_v2.0.a1 Prupe.6G325400_v2.0.a1
pyrus_communis	pycom12g20450 pycom12g20460
rosa_chinensis	RchiOBHm_Chr3g0454891
rosa_laevigata	RLG00000025403
rosa_multiflora	Rmu_sc0001792.1_g000010 Rmu_sc0013126.1_g000001 Rmu_sc0036267.1_g000001
rosa_roxburghii	Rroxscaffold_6G00424690
rosa_rugosa	Rorug03G0002800 Rorug03G0002800
rosa_samantha	Rh3AG062700 Rh3BG064600 Rh3CG063500 Rh3DG064600
rosa_wichuraiana	Rw3G004900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	59
AatII	GACGTC	1 cut(s)	390
Acc36I	ACCTGC	2 cut(s)	360, 2027
AccB1I	GGYRCC	2 cut(s)	44, 2797
AccBSI	CCGCTC	1 cut(s)	1700
AccII	CGCG	2 cut(s)	303, 1313
AciI	CCGC	9 cut(s)	5, 66, 108, 301, 626, 967, 1155, 1658, 1700
AclI	AACGTT	1 cut(s)	759
AclWI	GGATC	8 cut(s)	47, 176, 297, 617, 817, 1493, 1506, 2175
AcoI	YGGCCR	3 cut(s)	866, 1164, 1988
AcsI	RAATTY	6 cut(s)	295, 418, 856, 1129, 1178, 1380
AcuI	CTGAAG	2 cut(s)	764, 1476
AcyI	GRCGYC	1 cut(s)	387
AfaI	GTAC	9 cut(s)	177, 242, 896, 1522, 1785, 1796, 2235, 2406, 2715
AfeI	AGCGCT	1 cut(s)	1094
AflIII	ACRYGT	1 cut(s)	2074
AhdI	GACNNNNNGTC	1 cut(s)	586
AjnI	CCWGG	5 cut(s)	47, 454, 1990, 2333, 2800
Alw21I	GWGCWC	1 cut(s)	840
Alw26I	GTCTC	2 cut(s)	2000, 2636
AlwI	GGATC	8 cut(s)	47, 176, 297, 617, 817, 1493, 1506, 2175
Ama87I	CYCGRG	2 cut(s)	31, 2856
Aor51HI	AGCGCT	1 cut(s)	1094
AoxI	GGCC	8 cut(s)	605, 866, 1069, 1164, 1172, 1588, 1988, 2276
ApeKI	GCWGC	4 cut(s)	515, 1685, 2055, 2060
ApoI	RAATTY	6 cut(s)	295, 418, 856, 1129, 1178, 1380
ArsI	GACNNNNNNTTYG	4 cut(s)	775, 807, 2635, 2667
Asp700I	GAANNNNTTC	2 cut(s)	1380, 1764
AspLEI	GCGC	6 cut(s)	305, 1095, 1313, 2060, 2560, 2678
AspS9I	GGNCC	8 cut(s)	75, 605, 1280, 1288, 1542, 1589, 2731, 2836
AsuC2I	CCSGG	5 cut(s)	138, 232, 446, 1815, 2844
AsuHPI	GGTGA	6 cut(s)	55, 76, 172, 829, 2549, 2816
AvaI	CYCGRG	2 cut(s)	31, 2856
AvaII	GGWCC	6 cut(s)	75, 1280, 1288, 1542, 2731, 2836
AxyI	CCTNAGG	2 cut(s)	471, 1421
BaeGI	GKGCMC	1 cut(s)	342
BalI	TGGCCA	2 cut(s)	868, 1990
BamHI	GGATCC	1 cut(s)	1498
BanI	GGYRCC	2 cut(s)	44, 2797
BanII	GRGCYC	1 cut(s)	840
BarI	GAAGNNNNNNTAC	2 cut(s)	762, 794
BauI	CACGAG	1 cut(s)	494
BbsI	GAAGAC	3 cut(s)	23, 2405, 2754
Bbv12I	GWGCWC	1 cut(s)	840
BbvI	GCAGC	4 cut(s)	502, 1697, 2042, 2047
BceAI	ACGGC	2 cut(s)	113, 1789
BciT130I	CCWGG	5 cut(s)	49, 456, 1992, 2335, 2802
BciVI	GTATCC	1 cut(s)	920
BclI	TGATCA	1 cut(s)	1828
BcnI	CCSGG	5 cut(s)	138, 232, 446, 1815, 2844
BcoDI	GTCTC	2 cut(s)	2000, 2636
BfaI	CTAG	4 cut(s)	1889, 2024, 2171, 2625
BfmI	CTRYAG	5 cut(s)	1096, 1611, 1668, 2034, 2148
BfoI	RGCGCY	3 cut(s)	1096, 2561, 2679
BfuAI	ACCTGC	2 cut(s)	360, 2027
BfuI	GTATCC	1 cut(s)	920
BglII	AGATCT	2 cut(s)	1858, 2823
BisI	GCNGC	6 cut(s)	6, 516, 1686, 1701, 2056, 2061
BlpI	GCTNAGC	1 cut(s)	2064
BlsI	GCNGC	6 cut(s)	7, 517, 1687, 1702, 2057, 2062
BmcAI	AGTACT	1 cut(s)	242
Bme18I	GGWCC	6 cut(s)	75, 1280, 1288, 1542, 2731, 2836
BmeRI	GACNNNNNGTC	1 cut(s)	586
BmeT110I	CYCGRG	2 cut(s)	31, 2856
BmgT120I	GGNCC	8 cut(s)	75, 605, 1280, 1288, 1542, 1589, 2731, 2836
BmrI	ACTGGG	2 cut(s)	81, 1897
BmsI	GCATC	2 cut(s)	784, 2362
BmuI	ACTGGG	2 cut(s)	81, 1897
BpiI	GAAGAC	3 cut(s)	23, 2405, 2754
BplI	GAGNNNNNCTC	2 cut(s)	2850, 2882
BpmI	CTGGAG	2 cut(s)	1257, 1695
Bpu10I	CCTNAGC	1 cut(s)	834
Bpu1102I	GCTNAGC	1 cut(s)	2064
BpuEI	CTTGAG	2 cut(s)	2282, 2396
BpuMI	CCSGG	5 cut(s)	138, 232, 446, 1815, 2844
BsaBI	GATNNNNATC	1 cut(s)	2822
BsaHI	GRCGYC	1 cut(s)	387
BsaI	GGTCTC	1 cut(s)	2000
BsaXI	ACNNNNNCTCC	6 cut(s)	82, 86, 112, 116, 451, 481
Bse118I	RCCGGY	1 cut(s)	2278
Bse21I	CCTNAGG	2 cut(s)	471, 1421
Bse3DI	GCAATG	2 cut(s)	194, 1710
Bse8I	GATNNNNATC	1 cut(s)	2822
BseBI	CCWGG	5 cut(s)	49, 456, 1992, 2335, 2802
BseGI	GGATG	9 cut(s)	126, 369, 549, 1342, 1429, 1558, 1633, 2850, 2879
BseJI	GATNNNNATC	1 cut(s)	2822
BseMI	GCAATG	2 cut(s)	194, 1710
BseMII	CTCAG	9 cut(s)	428, 462, 675, 705, 825, 1435, 2055, 2235, 2438
BseSI	GKGCMC	1 cut(s)	342
BseXI	GCAGC	4 cut(s)	502, 1697, 2042, 2047
BseYI	CCCAGC	1 cut(s)	78
BsgI	GTGCAG	1 cut(s)	501
Bsh1236I	CGCG	2 cut(s)	303, 1313
BshFI	GGCC	8 cut(s)	607, 868, 1071, 1166, 1174, 1590, 1990, 2278
BshNI	GGYRCC	2 cut(s)	44, 2797
BsiHKAI	GWGCWC	1 cut(s)	840
BsiHKCI	CYCGRG	2 cut(s)	31, 2856
BsiSI	CCGG	6 cut(s)	138, 231, 446, 1814, 2279, 2844
BslFI	GGGAC	6 cut(s)	65, 88, 472, 593, 1468, 2822
BsmAI	GTCTC	2 cut(s)	2000, 2636
BsmFI	GGGAC	6 cut(s)	65, 88, 472, 593, 1468, 2822
BsmI	GAATGC	1 cut(s)	376
BsnI	GGCC	8 cut(s)	607, 868, 1071, 1166, 1174, 1590, 1990, 2278
Bso31I	GGTCTC	1 cut(s)	2000
BsoBI	CYCGRG	2 cut(s)	31, 2856
Bsp1286I	GDGCHC	2 cut(s)	342, 840
Bsp1407I	TGTACA	2 cut(s)	894, 2713
Bsp1720I	GCTNAGC	1 cut(s)	2064
Bsp19I	CCATGG	1 cut(s)	2884
BspACI	CCGC	9 cut(s)	5, 66, 108, 301, 626, 967, 1155, 1658, 1700
BspANI	GGCC	8 cut(s)	607, 868, 1071, 1166, 1174, 1590, 1990, 2278
BspCNI	CTCAG	9 cut(s)	427, 463, 676, 706, 826, 1434, 2056, 2236, 2437
BspFNI	CGCG	2 cut(s)	303, 1313
BspHI	TCATGA	1 cut(s)	1825
BspMAI	CTGCAG	2 cut(s)	1615, 2038
BspMI	ACCTGC	2 cut(s)	360, 2027
BspPI	GGATC	8 cut(s)	47, 176, 297, 617, 817, 1493, 1506, 2175
BspQI	GCTCTTC	1 cut(s)	845
BspT107I	GGYRCC	2 cut(s)	44, 2797
BspTNI	GGTCTC	1 cut(s)	2000
BsrBI	CCGCTC	1 cut(s)	1700
BsrDI	GCAATG	2 cut(s)	194, 1710
BsrFI	RCCGGY	1 cut(s)	2278
BsrGI	TGTACA	2 cut(s)	894, 2713
BssAI	RCCGGY	1 cut(s)	2278
BssNI	GRCGYC	1 cut(s)	387
BssSI	CACGAG	1 cut(s)	494
BssT1I	CCWWGG	5 cut(s)	116, 156, 1985, 2273, 2884
Bst2BI	CACGAG	1 cut(s)	494
Bst2UI	CCWGG	5 cut(s)	49, 456, 1992, 2335, 2802
Bst4CI	ACNGT	7 cut(s)	145, 913, 1060, 1193, 2233, 2404, 2899
Bst6I	CTCTTC	2 cut(s)	845, 1453
BstACI	GRCGYC	1 cut(s)	387
BstAUI	TGTACA	2 cut(s)	894, 2713
BstC8I	GCNNGC	3 cut(s)	426, 675, 1588
BstDSI	CCRYGG	1 cut(s)	2884
BstENI	CCTNNNNNAGG	2 cut(s)	474, 1989
BstF5I	GGATG	9 cut(s)	126, 369, 549, 1342, 1429, 1558, 1633, 2850, 2879
BstFNI	CGCG	2 cut(s)	303, 1313
BstH2I	RGCGCY	3 cut(s)	1096, 2561, 2679
BstHHI	GCGC	6 cut(s)	305, 1095, 1313, 2060, 2560, 2678
BstMAI	GTCTC	2 cut(s)	2000, 2636
BstMWI	GCNNNNNNNGC	6 cut(s)	710, 1152, 1216, 1889, 2055, 2153
BstNI	CCWGG	5 cut(s)	49, 456, 1992, 2335, 2802
BstNSI	RCATGY	4 cut(s)	677, 1141, 1780, 2078
BstSFI	CTRYAG	5 cut(s)	1096, 1611, 1668, 2034, 2148
BstSLI	GKGCMC	1 cut(s)	342
BstUI	CGCG	2 cut(s)	303, 1313
BstV1I	GCAGC	4 cut(s)	502, 1697, 2042, 2047
BstV2I	GAAGAC	3 cut(s)	23, 2405, 2754
BstX2I	RGATCY	5 cut(s)	289, 1498, 1858, 2167, 2823
BstXI	CCANNNNNNTGG	4 cut(s)	861, 959, 1719, 2909
BstYI	RGATCY	5 cut(s)	289, 1498, 1858, 2167, 2823
Bsu36I	CCTNAGG	2 cut(s)	471, 1421
BsuI	GTATCC	1 cut(s)	920
BsuRI	GGCC	8 cut(s)	607, 868, 1071, 1166, 1174, 1590, 1990, 2278
BtgI	CCRYGG	1 cut(s)	2884
BtgZI	GCGATG	1 cut(s)	2128
BtsCI	GGATG	9 cut(s)	126, 369, 549, 1342, 1429, 1558, 1633, 2850, 2879
BtsI	GCAGTG	1 cut(s)	1581
BtsIMutI	CAGTG	9 cut(s)	69, 390, 996, 1065, 1283, 1581, 1953, 2568, 2792
BveI	ACCTGC	2 cut(s)	360, 2027
Cac8I	GCNNGC	3 cut(s)	426, 675, 1588
CciI	TCATGA	1 cut(s)	1825
CfoI	GCGC	6 cut(s)	305, 1095, 1313, 2060, 2560, 2678
Cfr10I	RCCGGY	1 cut(s)	2278
Cfr13I	GGNCC	8 cut(s)	75, 605, 1280, 1288, 1542, 1589, 2731, 2836
Csp6I	GTAC	9 cut(s)	176, 241, 895, 1521, 1784, 1795, 2234, 2405, 2714
CviQI	GTAC	9 cut(s)	176, 241, 895, 1521, 1784, 1795, 2234, 2405, 2714
DraI	TTTAAA	1 cut(s)	726
DrdI	GACNNNNNNGTC	1 cut(s)	59
DriI	GACNNNNNGTC	1 cut(s)	586
DseDI	GACNNNNNNGTC	1 cut(s)	59
EaeI	YGGCCR	3 cut(s)	866, 1164, 1988
Eam1104I	CTCTTC	2 cut(s)	845, 1453
Eam1105I	GACNNNNNGTC	1 cut(s)	586
EarI	CTCTTC	2 cut(s)	845, 1453
Ecl136II	GAGCTC	1 cut(s)	838
Eco130I	CCWWGG	5 cut(s)	116, 156, 1985, 2273, 2884
Eco24I	GRGCYC	1 cut(s)	840
Eco31I	GGTCTC	1 cut(s)	2000
Eco32I	GATATC	1 cut(s)	1243
Eco47I	GGWCC	6 cut(s)	75, 1280, 1288, 1542, 2731, 2836
Eco47III	AGCGCT	1 cut(s)	1094
Eco53kI	GAGCTC	1 cut(s)	838
Eco57I	CTGAAG	2 cut(s)	764, 1476
Eco81I	CCTNAGG	2 cut(s)	471, 1421
Eco88I	CYCGRG	2 cut(s)	31, 2856
EcoICRI	GAGCTC	1 cut(s)	838
EcoNI	CCTNNNNNAGG	2 cut(s)	474, 1989
EcoO109I	RGGNCCY	3 cut(s)	75, 1542, 2836
EcoRII	CCWGG	5 cut(s)	47, 454, 1990, 2333, 2800
EcoRV	GATATC	1 cut(s)	1243
EcoT14I	CCWWGG	5 cut(s)	116, 156, 1985, 2273, 2884
EcoT22I	ATGCAT	1 cut(s)	2460
EcoT38I	GRGCYC	1 cut(s)	840
ErhI	CCWWGG	5 cut(s)	116, 156, 1985, 2273, 2884
FalI	AAGNNNNNCTT	6 cut(s)	875, 907, 1562, 1594, 2813, 2845
FaqI	GGGAC	6 cut(s)	65, 88, 472, 593, 1468, 2822
FauI	CCCGC	1 cut(s)	115
FauNDI	CATATG	2 cut(s)	575, 2460
FbaI	TGATCA	1 cut(s)	1828
Fnu4HI	GCNGC	6 cut(s)	6, 516, 1686, 1701, 2056, 2061
FokI	GGATG	9 cut(s)	133, 376, 556, 1329, 1416, 1565, 1640, 2837, 2886
FriOI	GRGCYC	1 cut(s)	840
Fsp4HI	GCNGC	6 cut(s)	6, 516, 1686, 1701, 2056, 2061
FspBI	CTAG	4 cut(s)	1889, 2024, 2171, 2625
GlaI	GCGC	6 cut(s)	304, 1094, 1312, 2059, 2559, 2677
GluI	GCNGC	6 cut(s)	6, 516, 1686, 1701, 2056, 2061
GsaI	CCCAGC	1 cut(s)	82
GsuI	CTGGAG	2 cut(s)	1257, 1695
HaeII	RGCGCY	3 cut(s)	1096, 2561, 2679
HaeIII	GGCC	8 cut(s)	607, 868, 1071, 1166, 1174, 1590, 1990, 2278
HapII	CCGG	6 cut(s)	138, 231, 446, 1814, 2279, 2844
HhaI	GCGC	6 cut(s)	305, 1095, 1313, 2060, 2560, 2678
Hin1I	GRCGYC	1 cut(s)	387
Hin6I	GCGC	6 cut(s)	303, 1093, 1311, 2058, 2558, 2676
HinP1I	GCGC	6 cut(s)	303, 1093, 1311, 2058, 2558, 2676
HincII	GTYRAC	3 cut(s)	904, 2006, 2116
HindII	GTYRAC	3 cut(s)	904, 2006, 2116
HinfI	GANTC	7 cut(s)	22, 29, 227, 784, 935, 963, 2757
HpaII	CCGG	6 cut(s)	138, 231, 446, 1814, 2279, 2844
HphI	GGTGA	6 cut(s)	55, 76, 172, 829, 2549, 2816
Hpy99I	CGWCG	2 cut(s)	134, 2873
HpyCH4III	ACNGT	7 cut(s)	145, 913, 1060, 1193, 2233, 2404, 2899
HpyCH4IV	ACGT	2 cut(s)	387, 759
HpyF10VI	GCNNNNNNNGC	6 cut(s)	710, 1152, 1216, 1889, 2055, 2153
HpySE526I	ACGT	2 cut(s)	387, 759
Hsp92I	GRCGYC	1 cut(s)	387
HspAI	GCGC	6 cut(s)	303, 1093, 1311, 2058, 2558, 2676
KflI	GGGWCCC	1 cut(s)	75
Ksp22I	TGATCA	1 cut(s)	1828
LguI	GCTCTTC	1 cut(s)	845
LmnI	GCTCC	3 cut(s)	1431, 2582, 2720
Lsp1109I	GCAGC	4 cut(s)	502, 1697, 2042, 2047
LweI	GCATC	2 cut(s)	784, 2362
MaeI	CTAG	4 cut(s)	1889, 2024, 2171, 2625
MaeII	ACGT	2 cut(s)	387, 759
MaeIII	GTNAC	6 cut(s)	61, 388, 598, 736, 2416, 2860
MbiI	CCGCTC	1 cut(s)	1700
MfeI	CAATTG	1 cut(s)	2238
MflI	RGATCY	5 cut(s)	289, 1498, 1858, 2167, 2823
MhlI	GDGCHC	2 cut(s)	342, 840
MlsI	TGGCCA	2 cut(s)	868, 1990
MluNI	TGGCCA	2 cut(s)	868, 1990
MlyI	GAGTC	3 cut(s)	23, 221, 778
MmeI	TCCRAC	3 cut(s)	669, 1907, 2104
Mox20I	TGGCCA	2 cut(s)	868, 1990
Mph1103I	ATGCAT	1 cut(s)	2460
MroXI	GAANNNNTTC	2 cut(s)	1380, 1764
MscI	TGGCCA	2 cut(s)	868, 1990
MseI	TTAA	7 cut(s)	725, 1623, 1737, 1791, 1877, 2085, 2914
MslI	CAYNNNNRTG	2 cut(s)	1191, 2463
Msp20I	TGGCCA	2 cut(s)	868, 1990
MspI	CCGG	6 cut(s)	138, 231, 446, 1814, 2279, 2844
MunI	CAATTG	1 cut(s)	2238
Mva1269I	GAATGC	1 cut(s)	376
MvaI	CCWGG	5 cut(s)	49, 456, 1992, 2335, 2802
MvnI	CGCG	2 cut(s)	303, 1313
MwoI	GCNNNNNNNGC	6 cut(s)	710, 1152, 1216, 1889, 2055, 2153
NciI	CCSGG	5 cut(s)	138, 232, 446, 1815, 2844
NcoI	CCATGG	1 cut(s)	2884
NdeI	CATATG	2 cut(s)	575, 2460
NmeAIII	GCCGAG	1 cut(s)	346
NmuCI	GTSAC	2 cut(s)	61, 388
NsiI	ATGCAT	1 cut(s)	2460
NspI	RCATGY	4 cut(s)	677, 1141, 1780, 2078
PaeI	GCATGC	1 cut(s)	677
PaeR7I	CTCGAG	1 cut(s)	2856
PagI	TCATGA	1 cut(s)	1825
PciI	ACATGT	1 cut(s)	2074
PciSI	GCTCTTC	1 cut(s)	845
PctI	GAATGC	1 cut(s)	376
PdmI	GAANNNNTTC	2 cut(s)	1380, 1764
PfeI	GAWTC	4 cut(s)	22, 935, 963, 2757
PflFI	GACNNNGTC	1 cut(s)	1060
PfoI	TCCNGGA	3 cut(s)	136, 230, 2333
PkrI	GCNGC	6 cut(s)	7, 517, 1687, 1702, 2057, 2062
PleI	GAGTC	3 cut(s)	23, 221, 778
PpsI	GAGTC	3 cut(s)	23, 221, 778
PpuMI	RGGWCCY	3 cut(s)	75, 1542, 2836
PscI	ACATGT	1 cut(s)	2074
Psp124BI	GAGCTC	1 cut(s)	840
Psp1406I	AACGTT	1 cut(s)	759
Psp5II	RGGWCCY	3 cut(s)	75, 1542, 2836
Psp6I	CCWGG	5 cut(s)	47, 454, 1990, 2333, 2800
PspFI	CCCAGC	1 cut(s)	78
PspGI	CCWGG	5 cut(s)	47, 454, 1990, 2333, 2800
PspPI	GGNCC	8 cut(s)	75, 605, 1280, 1288, 1542, 1589, 2731, 2836
PspPPI	RGGWCCY	3 cut(s)	75, 1542, 2836
PspXI	VCTCGAGB	1 cut(s)	2856
PstI	CTGCAG	2 cut(s)	1615, 2038
PsuI	RGATCY	5 cut(s)	289, 1498, 1858, 2167, 2823
PsyI	GACNNNGTC	1 cut(s)	1060
RsaI	GTAC	9 cut(s)	177, 242, 896, 1522, 1785, 1796, 2235, 2406, 2715
RsaNI	GTAC	9 cut(s)	176, 241, 895, 1521, 1784, 1795, 2234, 2405, 2714
RseI	CAYNNNNRTG	2 cut(s)	1191, 2463
SacI	GAGCTC	1 cut(s)	840
SapI	GCTCTTC	1 cut(s)	845
SaqAI	TTAA	7 cut(s)	725, 1623, 1737, 1791, 1877, 2085, 2914
SatI	GCNGC	6 cut(s)	6, 516, 1686, 1701, 2056, 2061
Sau96I	GGNCC	8 cut(s)	75, 605, 1280, 1288, 1542, 1589, 2731, 2836
ScaI	AGTACT	1 cut(s)	242
SchI	GAGTC	3 cut(s)	23, 221, 778
SduI	GDGCHC	2 cut(s)	342, 840
SfaNI	GCATC	2 cut(s)	784, 2362
SfcI	CTRYAG	5 cut(s)	1096, 1611, 1668, 2034, 2148
Sfr274I	CTCGAG	1 cut(s)	2856
SinI	GGWCC	6 cut(s)	75, 1280, 1288, 1542, 2731, 2836
SlaI	CTCGAG	1 cut(s)	2856
SmiMI	CAYNNNNRTG	2 cut(s)	1191, 2463
SmlI	CTYRAG	3 cut(s)	2297, 2411, 2856
SmoI	CTYRAG	3 cut(s)	2297, 2411, 2856
SphI	GCATGC	1 cut(s)	677
SsiI	CCGC	9 cut(s)	5, 66, 108, 301, 626, 967, 1155, 1658, 1700
SspMI	CTAG	4 cut(s)	1889, 2024, 2171, 2625
SstI	GAGCTC	1 cut(s)	840
StyI	CCWWGG	5 cut(s)	116, 156, 1985, 2273, 2884
TaaI	ACNGT	7 cut(s)	145, 913, 1060, 1193, 2233, 2404, 2899
TaiI	ACGT	2 cut(s)	390, 762
TaqI	TCGA	6 cut(s)	1078, 2550, 2816, 2832, 2857, 2868
TatI	WGTACW	4 cut(s)	240, 894, 1794, 2713
TauI	GCSGC	2 cut(s)	8, 1703
TfiI	GAWTC	4 cut(s)	22, 935, 963, 2757
Tru1I	TTAA	7 cut(s)	725, 1623, 1737, 1791, 1877, 2085, 2914
Tru9I	TTAA	7 cut(s)	725, 1623, 1737, 1791, 1877, 2085, 2914
TscAI	CASTG	9 cut(s)	76, 397, 1003, 1065, 1290, 1588, 1960, 2568, 2799
TseFI	GTSAC	2 cut(s)	61, 388
TseI	GCWGC	4 cut(s)	515, 1685, 2055, 2060
Tsp45I	GTSAC	2 cut(s)	61, 388
TspGWI	ACGGA	3 cut(s)	945, 1263, 2886
TspRI	CASTG	9 cut(s)	76, 397, 1003, 1065, 1290, 1588, 1960, 2568, 2799
Tth111I	GACNNNGTC	1 cut(s)	1060
VpaK11BI	GGWCC	6 cut(s)	75, 1280, 1288, 1542, 2731, 2836
XagI	CCTNNNNNAGG	2 cut(s)	474, 1989
XapI	RAATTY	6 cut(s)	295, 418, 856, 1129, 1178, 1380
XbaI	TCTAGA	3 cut(s)	2023, 2170, 2624
XceI	RCATGY	4 cut(s)	677, 1141, 1780, 2078
XcmI	CCANNNNNNNNNTGG	3 cut(s)	861, 1514, 1776
XhoI	CTCGAG	1 cut(s)	2856
XmnI	GAANNNNTTC	2 cut(s)	1380, 1764
XspI	CTAG	4 cut(s)	1889, 2024, 2171, 2625
ZraI	GACGTC	1 cut(s)	388
ZrmI	AGTACT	1 cut(s)	242
Zsp2I	ATGCAT	1 cut(s)	2460

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.