Rroxscaffold_6G00424690

Mannosylglycoprotein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
45818585 .. 45824021
5437 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00424690.1

Sequence Viewer

Length: 2976 bp
ATGGCGGCGGTTGCGGCGATCGGGAAGACGAAGCTGCACTCGGGCTGGCTCGGCACCCGGGACAGGGATGTCACCGTCACCGGCGTCCAGCTCACCACCACTCACCCTCCGTCTCTGGGCCCCAACTCTCCTTGGGTTGAGGCCGTCGTTCCGGGAACTGTTTTGGCAACCTTGGTGAAGAGCAAAGAATTGCCGGATCCGTTCTACGGCTTGGAAAATGAGTCGATCATAGATATTGCTGATTCAGGGAGGCAGTGGTACACATTCTGGTACTTTACAACCTTTCAGTGTAAGCTGTCAGGTACTCAGCACCTGGATCTGAATTTCCGTGGAATCAATTACCATGCAGAGGTATATTTAAATGGGCACAAAAAGGACATCCCAAGAGGGATGTTTCGAAGGCATTCTCTAGATGTCACTGATATAGTACGTGACGGTGAAAATTTGCTTGCTGTTGTCGTTTACCCCCCAGATCATCCTGGGAGTATTCCTCCTCAAGGTGGGCAAGGTGGTGATCATGAGATTGGGAAAGATGTGACTACACAATACGTGCAGGGTTGGGATTGGATGTGTCCTATAAGGGATAGAAACACCGGCATATGGGATGAAGTGTCAATTTATGTAACAGGGCCAGTGAAAATAATAGATCCCCACTTGGTTTCATCATTTTATGACAATTACAAGAGGGTGTATTTGCATGCAACAACTGAGTTGGAAAATAGAAGTACCTCGGTTGCCGAGTGTTCATTAAATATCCAAGTTACAACAGAACTTGAAGGAAACATTTGTTTAGTCGAACATCTTCAGACTCAGCATTTGTCAATCCCTGCTGGATCGCAGGTGCAATATACATTTCCTGAGCTCTTCTTCTACAAGCCAAATTTATGGTGGCCAAATGGTATGGGAAAGCAAGCCTTGTACAATGTTGTTATTACTGTGGATGTAAAGGGATATGGAGAGTCTGATATCTGGAGCCAATTATTTGGATTCCGCAAAATCGAGAGCCAGATTGATGATGCCACGGGTGGAAGGTTGTTCAAGGTCAATGGTCAGCCTATTTTCATTCGTGGTGGTAATTGGATATTGTCAGATGGCCTCCTACGGCTTTCAGAAAAGCGTTACAAAACAGACATCAAGTTTCATGCAGATATGAATTTTAACATGATCCGATGCTGGGGTGGTGGACTGGCTGAGAGGCCAGAATTTTATTATTACTGTGATATTTATGGCCTGTTGGTCTGGCAAGAATTTTGGATTACTGGAGATGTAGATGGACGAGGTGACCCGGTATCAAATCCAAACGGTCCACTGGACCATGATCTTTTCTTGCTATGTGCAAGAGATACTGTCAAGCTTCTAAGGAACCATCCAAGTCTTGCTCTTTGGGTGGGAGGAAATGAACAAATCCCACCCGATGACATTAACAAAGCTTTGAAACAGGACCTCAGGCTCCATCCACATTTTGAAAATTCCATAAATGGTAGTGGTGAGTATGTTGAAAATTTGAAGTCAGTGTCAGAGGATCCAAGCCAATATCTGGATGGTGCACGCATTTACATACAAGGATCGATGTGGGATGGATTTGCAAATGGAAAGGGGGACTTCACTGATGGCCCTTATGAAATCCAAAATCCTGAAGACTTCTTTAAGGATGATTTTTACAAATATGGGTTCAATCCTGAGGTTGGTTCAGTAGGTATGCCTGTTGCAGCTACCATCAGAGCAACAATGCTTCCAGAAGCATGGCAGATCCCTTTGTTCAACAAAGTTTCCGATGATTATGAAGAAGTTCCAAACCCTGTCTGGGAATACCATAAATACATACCTTATTCAAAACCAGGCAAGGTTCATGACCAGATTTTACTCTATGGGTTTCCAAAGGATCTTGATGACTTTTGCTTACAGGCTCAGCTTGCTAACTATATTCAGTATAGAGCTCTACTGGAGGGTTGGACTTCCCGCATGTGGAGTAAATACACTGGTGTTTTGATTTGGAAAACACAGAATCCTTGGACAGGTCTTAGAGGTCAATTTTACGATCATCTTCTTGACCAAACAGCAGGTTTCTATGGCTGTCGCTGTGCTGCAGAGCCAATACACGTCCAACTTAACTTGGCTACTTATTCTATAGAGGTTGTAAATACTACATCAGAGGAATTATCGGACATTGCTATTGAAGCATCAGTGTGGGATCTGGATGGAACATGCCCATACTACAAAGTTCATGAAAATCTGTCAATGCCGCCAAAAAGAACAGTACCGGTTGCTGAGATGAAATATCCAAAATCTAGAAACCCAAAACCTGTGTACTTTCTTCTTCTCAAACTGTATCACAAGTCAAATTTTCGCATTATCTCCAGGAACTTTTATTGGTTGCATCTTGCTGGTGGGGATTACAAGCTGTTAGAACCATACCGAAAGAAAAGAGTTCCACTCAAGATTAAATCCGAGGTCTTCATCAAAGGAACCACCTACGAAATGCACATGAATGTGAAGAACACATCTGCGAAACCACCACCTAAAACTTTAACCTATCAGAATCATTTCACCCCTAAACTTGGTGATGGTGATTTTGATATCCACTCGGTGGACCCTCAACCTGATGGAGCAGACGAAAAACATGAATTTGGTTTTCTAAAGAAGATATGCAGGCATTTTGCGAAAGAAACTGATGGTTTGAGGGTTGCTGAAATCAATGGCTCTAACGTTGGTGTTGCTTTCTTCCTTCATTTTTCTGTTCATGGAGTAAAGAAGGACCATAAGGAAGGAGAAGACACAAGAATTCTTCCTGTTCATTACACTGACAACTACTTTTCACTGGTGCCAGGTGAGTCCATGCCCATCAAGATCACTTTTGAGGTCCCTCCTGGTGTGACCCCCGAGTTACTCTTCAAGGATGGAATTATCATGGTGCCCATCGAGTCCATTGAGGTGTTTAGAAATTGTCATCTCGTCTTTGCTGCTTGTAGTACTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

991

Amino Acids

112.72

Weight (kDa)

5.8

Isoelectric Point (pI)

32.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_2_N2 PF22666 43 - 201 9.1e-24 Glycosyl hydrolase 2 galactose-binding domain-like
Glyco_hydro_2 PF00703 212 - 331 2.5e-11 Glycosyl hydrolases family 2
Ig_GlcNase PF18368 904 - 953 2.1e-06 Exo-beta-D-glucosaminidase Ig-fold domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 829
AasI GACNNNNNNGTC 1 cut(s) 68
Acc36I ACCTGC 2 cut(s) 829, 2051
AccB1I GGYRCC 3 cut(s) 53, 2821, 2911
AccB7I CCANNNNNTGG 2 cut(s) 1537, 2587
AciI CCGC 6 cut(s) 5, 8, 14, 991, 1960, 2243
AclI AACGTT 1 cut(s) 2706
AcoI YGGCCR 1 cut(s) 890
AcuI CTGAAG 2 cut(s) 788, 1656
AcyI GRCGYC 1 cut(s) 84
AdeI CACNNNGTG 1 cut(s) 2587
AfaI GTAC 9 cut(s) 260, 272, 304, 429, 727, 920, 2259, 2309, 2971
AflIII ACRYGT 1 cut(s) 2098
AgeI ACCGGT 1 cut(s) 2260
AjiI CACGTC 1 cut(s) 2101
AjnI CCWGG 6 cut(s) 312, 478, 1837, 2357, 2824, 2866
Alw21I GWGCWC 3 cut(s) 864, 1549, 1939
Alw26I GTCTC 1 cut(s) 117
Alw44I GTGCAC 1 cut(s) 1545
AlwNI CAGNNNCTG 1 cut(s) 313
Ama87I CYCGRG 3 cut(s) 40, 57, 2879
AoxI GGCC 8 cut(s) 118, 141, 629, 890, 1093, 1196, 1228, 1612
ApaI GGGCCC 1 cut(s) 122
ApaLI GTGCAC 1 cut(s) 1545
ApeKI GCWGC 4 cut(s) 34, 1709, 2084, 2960
ArsI GACNNNNNNTTYG 2 cut(s) 799, 831
AsiGI ACCGGT 1 cut(s) 2260
Asp700I GAANNNNTTC 4 cut(s) 403, 801, 1788, 2543
AsuC2I CCSGG 4 cut(s) 58, 59, 153, 1286
AsuII TTCGAA 1 cut(s) 397
AvaI CYCGRG 3 cut(s) 40, 57, 2879
AvaII GGWCC 6 cut(s) 1304, 1312, 1441, 2590, 2755, 2860
AxyI CCTNAGG 2 cut(s) 1445, 1680
BaeGI GKGCMC 4 cut(s) 122, 369, 1549, 2916
BalI TGGCCA 1 cut(s) 892
BamHI GGATCC 2 cut(s) 196, 1522
BanI GGYRCC 3 cut(s) 53, 2821, 2911
BanII GRGCYC 3 cut(s) 122, 864, 1939
BbsI GAAGAC 4 cut(s) 32, 1644, 2446, 2778
Bbv12I GWGCWC 3 cut(s) 864, 1549, 1939
BbvI GCAGC 4 cut(s) 21, 1721, 2071, 2947
BceAI ACGGC 3 cut(s) 128, 223, 1118
BciT130I CCWGG 6 cut(s) 314, 480, 1839, 2359, 2826, 2868
BclI TGATCA 1 cut(s) 514
BcnI CCSGG 4 cut(s) 58, 59, 153, 1286
BcoDI GTCTC 1 cut(s) 117
BfaI CTAG 2 cut(s) 410, 2289
BfmI CTRYAG 2 cut(s) 2085, 2127
BfuAI ACCTGC 2 cut(s) 829, 2051
BisI GCNGC 7 cut(s) 6, 15, 35, 1710, 2085, 2243, 2961
BlpI GCTNAGC 1 cut(s) 1908
BlsI GCNGC 7 cut(s) 7, 16, 36, 1711, 2086, 2244, 2962
BmcAI AGTACT 1 cut(s) 2971
Bme18I GGWCC 6 cut(s) 1304, 1312, 1441, 2590, 2755, 2860
BmeT110I CYCGRG 3 cut(s) 40, 57, 2879
BmgBI CACGTC 1 cut(s) 2101
BmsI GCATC 4 cut(s) 1006, 1160, 2189, 2386
BpiI GAAGAC 4 cut(s) 32, 1644, 2446, 2778
BplI GAGNNNNNCTC 4 cut(s) 475, 507, 2418, 2450
BpmI CTGGAG 4 cut(s) 991, 1281, 1964, 2341
Bpu10I CCTNAGC 1 cut(s) 858
Bpu1102I GCTNAGC 1 cut(s) 1908
Bpu14I TTCGAA 1 cut(s) 397
BpuEI CTTGAG 2 cut(s) 480, 2420
BpuMI CCSGG 4 cut(s) 58, 59, 153, 1286
Bsa29I ATCGAT 1 cut(s) 1568
BsaAI YACGTR 2 cut(s) 431, 550
BsaHI GRCGYC 1 cut(s) 84
BsaJI CCNNGG 9 cut(s) 57, 131, 171, 328, 479, 729, 1020, 2009, 2448
BsaWI WCCGGW 1 cut(s) 2260
BsaXI ACNNNNNCTCC 2 cut(s) 91, 121
Bse118I RCCGGY 3 cut(s) 80, 593, 2260
Bse1I ACTGG 7 cut(s) 632, 1191, 1264, 1314, 1947, 1984, 2823
Bse21I CCTNAGG 2 cut(s) 1445, 1680
Bse3DI GCAATG 1 cut(s) 2166
BseBI CCWGG 6 cut(s) 314, 480, 1839, 2359, 2826, 2868
BseCI ATCGAT 1 cut(s) 1568
BseDI CCNNGG 9 cut(s) 57, 131, 171, 328, 479, 729, 1020, 2009, 2448
BseMI GCAATG 1 cut(s) 2166
BseMII CTCAG 9 cut(s) 320, 699, 824, 849, 1182, 1459, 1671, 1922, 2259
BseNI ACTGG 7 cut(s) 632, 1191, 1264, 1314, 1947, 1984, 2823
BseRI GAGGAG 1 cut(s) 483
BseSI GKGCMC 4 cut(s) 122, 369, 1549, 2916
BseXI GCAGC 4 cut(s) 21, 1721, 2071, 2947
BseYI CCCAGC 1 cut(s) 1173
BsgI GTGCAG 2 cut(s) 20, 572
Bsh1285I CGRYCG 1 cut(s) 21
BshFI GGCC 8 cut(s) 120, 143, 631, 892, 1095, 1198, 1230, 1614
BshNI GGYRCC 3 cut(s) 53, 2821, 2911
BshTI ACCGGT 1 cut(s) 2260
BshVI ATCGAT 1 cut(s) 1568
BsiEI CGRYCG 1 cut(s) 21
BsiHKAI GWGCWC 3 cut(s) 864, 1549, 1939
BsiHKCI CYCGRG 3 cut(s) 40, 57, 2879
BsiSI CCGG 7 cut(s) 58, 81, 152, 194, 594, 1286, 2261
BslFI GGGAC 3 cut(s) 74, 1613, 2846
BsmAI GTCTC 1 cut(s) 117
BsmBI CGTCTC 1 cut(s) 117
BsmFI GGGAC 3 cut(s) 74, 1613, 2846
BsmI GAATGC 1 cut(s) 403
BsnI GGCC 8 cut(s) 120, 143, 631, 892, 1095, 1198, 1230, 1614
BsoBI CYCGRG 3 cut(s) 40, 57, 2879
Bsp119I TTCGAA 1 cut(s) 397
Bsp120I GGGCCC 1 cut(s) 118
Bsp1286I GDGCHC 6 cut(s) 122, 369, 864, 1549, 1939, 2916
Bsp1407I TGTACA 1 cut(s) 918
Bsp1720I GCTNAGC 1 cut(s) 1908
BspACI CCGC 6 cut(s) 5, 8, 14, 991, 1960, 2243
BspANI GGCC 8 cut(s) 120, 143, 631, 892, 1095, 1198, 1230, 1614
BspCNI CTCAG 9 cut(s) 319, 700, 823, 850, 1183, 1458, 1672, 1921, 2260
BspDI ATCGAT 1 cut(s) 1568
BspHI TCATGA 3 cut(s) 517, 1849, 2224
BspMAI CTGCAG 1 cut(s) 2089
BspMI ACCTGC 2 cut(s) 829, 2051
BspQI GCTCTTC 2 cut(s) 173, 869
BspT104I TTCGAA 1 cut(s) 397
BspT107I GGYRCC 3 cut(s) 53, 2821, 2911
BsrDI GCAATG 1 cut(s) 2166
BsrFI RCCGGY 3 cut(s) 80, 593, 2260
BsrGI TGTACA 1 cut(s) 918
BsrI ACTGG 7 cut(s) 632, 1191, 1264, 1314, 1947, 1984, 2823
BssAI RCCGGY 3 cut(s) 80, 593, 2260
BssECI CCNNGG 9 cut(s) 57, 131, 171, 328, 479, 729, 1020, 2009, 2448
BssNI GRCGYC 1 cut(s) 84
BssT1I CCWWGG 3 cut(s) 131, 171, 2009
Bst2UI CCWGG 6 cut(s) 314, 480, 1839, 2359, 2826, 2868
Bst4CI ACNGT 9 cut(s) 76, 160, 437, 937, 1217, 1304, 1348, 2257, 2328
Bst6I CTCTTC 3 cut(s) 173, 869, 2894
BstACI GRCGYC 1 cut(s) 84
BstAUI TGTACA 1 cut(s) 918
BstBAI YACGTR 2 cut(s) 431, 550
BstBI TTCGAA 1 cut(s) 397
BstC8I GCNNGC 7 cut(s) 47, 450, 699, 912, 1549, 1914, 2651
BstDSI CCRYGG 2 cut(s) 328, 1020
BstEII GGTNACC 1 cut(s) 1280
BstENI CCTNNNNNAGG 2 cut(s) 495, 2013
BstMAI GTCTC 1 cut(s) 117
BstMCI CGRYCG 1 cut(s) 21
BstMWI GCNNNNNNNGC 5 cut(s) 11, 14, 51, 1913, 2177
BstNI CCWGG 6 cut(s) 314, 480, 1839, 2359, 2826, 2868
BstNSI RCATGY 3 cut(s) 701, 1966, 2208
BstPI GGTNACC 1 cut(s) 1280
BstSFI CTRYAG 2 cut(s) 2085, 2127
BstSLI GKGCMC 4 cut(s) 122, 369, 1549, 2916
BstV1I GCAGC 4 cut(s) 21, 1721, 2071, 2947
BstV2I GAAGAC 4 cut(s) 32, 1644, 2446, 2778
BstX2I RGATCY 7 cut(s) 196, 316, 646, 1522, 1749, 1882, 2191
BstXI CCANNNNNNTGG 3 cut(s) 885, 983, 1743
BstYI RGATCY 7 cut(s) 196, 316, 646, 1522, 1749, 1882, 2191
Bsu15I ATCGAT 1 cut(s) 1568
Bsu36I CCTNAGG 2 cut(s) 1445, 1680
BsuRI GGCC 8 cut(s) 120, 143, 631, 892, 1095, 1198, 1230, 1614
BsuTUI ATCGAT 1 cut(s) 1568
BtgI CCRYGG 2 cut(s) 328, 1020
BtrI CACGTC 1 cut(s) 2101
BtsI GCAGTG 1 cut(s) 260
BveI ACCTGC 2 cut(s) 829, 2051
Cac8I GCNNGC 7 cut(s) 47, 450, 699, 912, 1549, 1914, 2651
CaiI CAGNNNCTG 1 cut(s) 313
CciI TCATGA 3 cut(s) 517, 1849, 2224
Cfr10I RCCGGY 3 cut(s) 80, 593, 2260
Cfr9I CCCGGG 1 cut(s) 57
ClaI ATCGAT 1 cut(s) 1568
CseI GACGC 1 cut(s) 73
Csp6I GTAC 9 cut(s) 259, 271, 303, 428, 726, 919, 2258, 2308, 2970
CspAI ACCGGT 1 cut(s) 2260
CviQI GTAC 9 cut(s) 259, 271, 303, 428, 726, 919, 2258, 2308, 2970
DraI TTTAAA 1 cut(s) 360
DraIII CACNNNGTG 1 cut(s) 2587
DrdI GACNNNNNNGTC 1 cut(s) 68
DseDI GACNNNNNNGTC 1 cut(s) 68
EaeI YGGCCR 1 cut(s) 890
Eam1104I CTCTTC 3 cut(s) 173, 869, 2894
EarI CTCTTC 3 cut(s) 173, 869, 2894
Ecl136II GAGCTC 2 cut(s) 862, 1937
Eco130I CCWWGG 3 cut(s) 131, 171, 2009
Eco24I GRGCYC 3 cut(s) 122, 864, 1939
Eco32I GATATC 2 cut(s) 967, 2578
Eco47I GGWCC 6 cut(s) 1304, 1312, 1441, 2590, 2755, 2860
Eco53kI GAGCTC 2 cut(s) 862, 1937
Eco57I CTGAAG 2 cut(s) 788, 1656
Eco81I CCTNAGG 2 cut(s) 1445, 1680
Eco88I CYCGRG 3 cut(s) 40, 57, 2879
Eco91I GGTNACC 1 cut(s) 1280
EcoICRI GAGCTC 2 cut(s) 862, 1937
EcoNI CCTNNNNNAGG 2 cut(s) 495, 2013
EcoO109I RGGNCCY 3 cut(s) 119, 1441, 2860
EcoO65I GGTNACC 1 cut(s) 1280
EcoRI GAATTC 1 cut(s) 2781
EcoRII CCWGG 6 cut(s) 312, 478, 1837, 2357, 2824, 2866
EcoRV GATATC 2 cut(s) 967, 2578
EcoT14I CCWWGG 3 cut(s) 131, 171, 2009
EcoT38I GRGCYC 3 cut(s) 122, 864, 1939
ErhI CCWWGG 3 cut(s) 131, 171, 2009
Esp3I CGTCTC 1 cut(s) 117
FalI AAGNNNNNCTT 4 cut(s) 899, 931, 1586, 1618
FaqI GGGAC 3 cut(s) 74, 1613, 2846
FauI CCCGC 1 cut(s) 1967
FauNDI CATATG 1 cut(s) 599
FbaI TGATCA 1 cut(s) 514
Fnu4HI GCNGC 7 cut(s) 6, 15, 35, 1710, 2085, 2243, 2961
FriOI GRGCYC 3 cut(s) 122, 864, 1939
Fsp4HI GCNGC 7 cut(s) 6, 15, 35, 1710, 2085, 2243, 2961
FspBI CTAG 2 cut(s) 410, 2289
GluI GCNGC 7 cut(s) 6, 15, 35, 1710, 2085, 2243, 2961
GsaI CCCAGC 1 cut(s) 1177
GsuI CTGGAG 4 cut(s) 991, 1281, 1964, 2341
HaeIII GGCC 8 cut(s) 120, 143, 631, 892, 1095, 1198, 1230, 1614
HapII CCGG 7 cut(s) 58, 81, 152, 194, 594, 1286, 2261
HgaI GACGC 1 cut(s) 73
Hin1I GRCGYC 1 cut(s) 84
HindIII AAGCTT 2 cut(s) 1352, 1428
HpaII CCGG 7 cut(s) 58, 81, 152, 194, 594, 1286, 2261
Hpy166II GTNNAC 7 cut(s) 261, 463, 1184, 1307, 1547, 2308, 2590
Hpy8I GTNNAC 7 cut(s) 261, 463, 1184, 1307, 1547, 2308, 2590
Hpy99I CGWCG 1 cut(s) 149
HpyAV CCTTC 6 cut(s) 393, 770, 1023, 2735, 2746, 2759
HpyCH4III ACNGT 9 cut(s) 76, 160, 437, 937, 1217, 1304, 1348, 2257, 2328
HpyCH4IV ACGT 4 cut(s) 430, 549, 2100, 2706
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 14, 51, 1913, 2177
HpySE526I ACGT 4 cut(s) 430, 549, 2100, 2706
Hsp92I GRCGYC 1 cut(s) 84
Ksp22I TGATCA 1 cut(s) 514
LguI GCTCTTC 2 cut(s) 173, 869
LmnI GCTCC 3 cut(s) 972, 1455, 2606
Lsp1109I GCAGC 4 cut(s) 21, 1721, 2071, 2947
LweI GCATC 4 cut(s) 1006, 1160, 2189, 2386
MaeI CTAG 2 cut(s) 410, 2289
MaeII ACGT 4 cut(s) 430, 549, 2100, 2706
MflI RGATCY 7 cut(s) 196, 316, 646, 1522, 1749, 1882, 2191
MhlI GDGCHC 6 cut(s) 122, 369, 864, 1549, 1939, 2916
MlsI TGGCCA 1 cut(s) 892
MluNI TGGCCA 1 cut(s) 892
MlyI GAGTC 5 cut(s) 230, 802, 968, 2840, 2930
MmeI TCCRAC 3 cut(s) 693, 1931, 2128
Mox20I TGGCCA 1 cut(s) 892
MroXI GAANNNNTTC 4 cut(s) 403, 801, 1788, 2543
MscI TGGCCA 1 cut(s) 892
MseI TTAA 8 cut(s) 359, 749, 1158, 1422, 1647, 2109, 2442, 2528
MslI CAYNNNNRTG 4 cut(s) 2185, 2487, 2489, 2930
Msp20I TGGCCA 1 cut(s) 892
MspI CCGG 7 cut(s) 58, 81, 152, 194, 594, 1286, 2261
Mva1269I GAATGC 1 cut(s) 403
MvaI CCWGG 6 cut(s) 314, 480, 1839, 2359, 2826, 2868
MwoI GCNNNNNNNGC 5 cut(s) 11, 14, 51, 1913, 2177
NciI CCSGG 4 cut(s) 58, 59, 153, 1286
NdeI CATATG 1 cut(s) 599
NmeAIII GCCGAG 2 cut(s) 30, 763
NmuCI GTSAC 7 cut(s) 70, 76, 415, 431, 535, 1280, 2872
NspI RCATGY 3 cut(s) 701, 1966, 2208
NspV TTCGAA 1 cut(s) 397
PaeI GCATGC 1 cut(s) 701
PagI TCATGA 3 cut(s) 517, 1849, 2224
PaqCI CACCTGC 1 cut(s) 829
PciSI GCTCTTC 2 cut(s) 173, 869
PctI GAATGC 1 cut(s) 403
PdmI GAANNNNTTC 4 cut(s) 403, 801, 1788, 2543
PfeI GAWTC 5 cut(s) 242, 333, 987, 2005, 2539
PflMI CCANNNNNTGG 2 cut(s) 1537, 2587
PfoI TCCNGGA 2 cut(s) 151, 2357
PinAI ACCGGT 1 cut(s) 2260
PkrI GCNGC 7 cut(s) 7, 16, 36, 1711, 2086, 2244, 2962
Ple19I CGATCG 1 cut(s) 21
PleI GAGTC 5 cut(s) 229, 802, 967, 2839, 2929
PpsI GAGTC 5 cut(s) 229, 802, 967, 2839, 2929
Ppu21I YACGTR 2 cut(s) 431, 550
PpuMI RGGWCCY 2 cut(s) 1441, 2860
Psp124BI GAGCTC 2 cut(s) 864, 1939
Psp1406I AACGTT 1 cut(s) 2706
Psp5II RGGWCCY 2 cut(s) 1441, 2860
Psp6I CCWGG 6 cut(s) 312, 478, 1837, 2357, 2824, 2866
PspEI GGTNACC 1 cut(s) 1280
PspFI CCCAGC 1 cut(s) 1173
PspGI CCWGG 6 cut(s) 312, 478, 1837, 2357, 2824, 2866
PspOMI GGGCCC 1 cut(s) 118
PspPPI RGGWCCY 2 cut(s) 1441, 2860
PstI CTGCAG 1 cut(s) 2089
PstNI CAGNNNCTG 1 cut(s) 313
PsuI RGATCY 7 cut(s) 196, 316, 646, 1522, 1749, 1882, 2191
PvuI CGATCG 1 cut(s) 21
RsaI GTAC 9 cut(s) 260, 272, 304, 429, 727, 920, 2259, 2309, 2971
RsaNI GTAC 9 cut(s) 259, 271, 303, 428, 726, 919, 2258, 2308, 2970
RseI CAYNNNNRTG 4 cut(s) 2185, 2487, 2489, 2930
SacI GAGCTC 2 cut(s) 864, 1939
SapI GCTCTTC 2 cut(s) 173, 869
SaqAI TTAA 8 cut(s) 359, 749, 1158, 1422, 1647, 2109, 2442, 2528
SatI GCNGC 7 cut(s) 6, 15, 35, 1710, 2085, 2243, 2961
ScaI AGTACT 1 cut(s) 2971
SchI GAGTC 5 cut(s) 230, 802, 968, 2840, 2930
SduI GDGCHC 6 cut(s) 122, 369, 864, 1549, 1939, 2916
SfaNI GCATC 4 cut(s) 1006, 1160, 2189, 2386
SfcI CTRYAG 2 cut(s) 2085, 2127
SfuI TTCGAA 1 cut(s) 397
SgrAI CRCCGGYG 1 cut(s) 80
SinI GGWCC 6 cut(s) 1304, 1312, 1441, 2590, 2755, 2860
SmaI CCCGGG 1 cut(s) 59
SmiI ATTTAAAT 1 cut(s) 360
SmiMI CAYNNNNRTG 4 cut(s) 2185, 2487, 2489, 2930
SmlI CTYRAG 2 cut(s) 495, 2435
SmoI CTYRAG 2 cut(s) 495, 2435
SphI GCATGC 1 cut(s) 701
SsiI CCGC 6 cut(s) 5, 8, 14, 991, 1960, 2243
SspMI CTAG 2 cut(s) 410, 2289
SstI GAGCTC 2 cut(s) 864, 1939
StyI CCWWGG 3 cut(s) 131, 171, 2009
SwaI ATTTAAAT 1 cut(s) 360
TaaI ACNGT 9 cut(s) 76, 160, 437, 937, 1217, 1304, 1348, 2257, 2328
TaiI ACGT 4 cut(s) 433, 552, 2103, 2709
TaqI TCGA 6 cut(s) 224, 397, 795, 999, 1568, 2919
TatI WGTACW 3 cut(s) 918, 2307, 2969
TauI GCSGC 3 cut(s) 8, 17, 2245
TfiI GAWTC 5 cut(s) 242, 333, 987, 2005, 2539
Tru1I TTAA 8 cut(s) 359, 749, 1158, 1422, 1647, 2109, 2442, 2528
Tru9I TTAA 8 cut(s) 359, 749, 1158, 1422, 1647, 2109, 2442, 2528
TseFI GTSAC 7 cut(s) 70, 76, 415, 431, 535, 1280, 2872
TseI GCWGC 4 cut(s) 34, 1709, 2084, 2960
Tsp45I GTSAC 7 cut(s) 70, 76, 415, 431, 535, 1280, 2872
TspGWI ACGGA 3 cut(s) 99, 189, 317
TspMI CCCGGG 1 cut(s) 57
Van91I CCANNNNNTGG 2 cut(s) 1537, 2587
VneI GTGCAC 1 cut(s) 1545
VpaK11BI GGWCC 6 cut(s) 1304, 1312, 1441, 2590, 2755, 2860
XagI CCTNNNNNAGG 2 cut(s) 495, 2013
XbaI TCTAGA 2 cut(s) 409, 2288
XceI RCATGY 3 cut(s) 701, 1966, 2208
XcmI CCANNNNNNNNNTGG 3 cut(s) 885, 1538, 1800
XmaI CCCGGG 1 cut(s) 57
XmnI GAANNNNTTC 4 cut(s) 403, 801, 1788, 2543
XspI CTAG 2 cut(s) 410, 2289
ZrmI AGTACT 1 cut(s) 2971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.