Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0006337

Physical Location & Seq

Genomic Coordinates Reverse (-)

4277561 .. 4283602

Gene Structure 6042 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG064600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGGCGGCGGCGGCGATCGGGAAGACGAAGCTGCACTCGGGCTGGCTCGGCACCCGGGACAGGGATGTCACCGTCACCGGCGTCCAGCTCACCACCACTCACCCTCCGTCTCTGGGCTCCAAATCTCCTTGGGTTGAAGCCGTCGTTCCGGGAACTGTTTTGGCAACCTTGGTGAAGAGCAAAGAATTGCCGGATCCGTTCTACGGCATGGAAAATGAGTCAATCATAGATATTGCTGATTCAGGGAGGCAGTGGTACACATTTTGGTACTTTACAACCTTTCAGTGTAAGCTGTCTGGTACTCAGCACCTGGATCTGAATTTCCGTGGAATCAATTACTATGCAGAGGTATATTTGAATGGGCACAAAAAGGACATCCCAAGAGGGATGTTTCAAAGGCATTCTCTAGATGTCACTGATATAGTACGTGACGGTGAAAATTTGCTTGCTGTTGTCGTTTACCCCCCAGATCATCCTGGGAGTATTCCTCCTCAGGGTGGGCAAGGTGGTGATCATGAGATTGGGAAAGATGTGACTACACAATACGTGCAGGGTTGGGATTGGATGTGTCCTATAAGGGATAGAAACACCGGCATATGGGATGAAGTGTCAATTTATGTAACAGGGCCAGTGAAAATATTAGATCCCCACTTGGTTTCATCATTTTATGACAATTACAAGAGGGTGTATTTGCATGCAACGACTGAGTTGGAAAATAGAAGTACCTTGGTTGCCGAGTGTTCTTTGAATATCCAAGTTACAACAGAACTTGAAGGAAACATTTGTTTAGTCGAGCATCTTCAGACTCAGCATCTGTCAATCCCTGCTGGATCGCGGGTGCAATATACATTTCCTGAGCTCTTCTTCTACAAGCCAAATTTATGGTGGCCAAATGGTATGGGAAAGCAAGCCTTGTACAATGTTGTTATTACTGTTGATGTAAAGGGATATGGAGAGTCTGATTTGTGGAGCCAATTATTTGGATTCCGCAAAATCGAGAGCCACATTGATGATGCCACCGGTGGAAGGTTGTTCAAGGTCAATGGTCAGCCTATTTTCATTCGTGGTGGTAATTGGATATTGTCAGATGGCCTCCTACGGCTTTCAGAAAAGCGTTACAAAACAGACATCAAGTTTCATGCAGATATGAATTTTAATATGATCCGATGTTGGGGTGGTGGACTGGCTGAGAGGCCAGAATTTTATTATTACTGTGATATTTATGGCCTGTTGGTCTGGCAAGAATTTTGGATTACTGGAGATGTAGATGGACGAGGTTTCCCGGTATCAAATCCAAACGGTCCACTGGACCATGATCTTTTCTTGCTATGTGCAAGAGATACTGTCAAGCTTCTAAGGAACCATCCAAGTCTTGCTCTTTGGGTGGGAGGAAATGAACAAATCCCACCCGATGACATCAACAAAGCTTTGAAACAGGACCTCAGGCTCCATCCACATTTTGAAAATTCCATAAATGGTAGTGGTGAGTATGTTGAAAATTTGAAGTCAGTGTCAAAGGATCCAAGCCAATATCTGGATGGTACACGCATTTACATACAAGGATCGATGTGGGATGGATTTGCAAATGGAAAGGGGGACTACACTGACGGCCCTTATGAAATCCAAAATCCTGAAGACTTCTTTAAGGATGATTTTTACAAATATGGGTTCAATCCTGAGGTTGGTTCAGTAGGTATGCCTGTTGCAGCTACCATCAGAGCGACAATGCTTCCAGAAGCATGGCAGATCCCTTTGTTCAACAAAGTTTCCGATGATTATGAAGAAGTTCCAAACCCTGTCTGGGAATACCATAAATACATACCTTATTCAAAACCAGGCAAGGTTCATGACCAGATTTTACTCTATGGGTTTCCAAAGGATCTTGATGACTTTTGCTTACAGGCTCAGCTTGCTAACTATATTCAGTATAGAGCTCTACTGGAGGGTTGGACTTCCCGCATGTGGAGTAAACACACCGGTGTTTTGATTTGGAAAACACAGAATCCTTGGACAGGTCTTAGAGGTCAAGTTTACGATCATCTTCTTGACCAAACAGCAGGTTTCTATGGCTGTCGCTGTGCTGCAGAGCCAATACACGTCCAACTTAACTTGGCTACTTATTCTATAGAGGTAAGCTCTAGAGTCGCAACAAAATCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_2 Glyco_hydro_2_C

Protein Analysis

719

Amino Acids

81.69

Weight (kDa)

5.56

Isoelectric Point (pI)

29.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_2_N2	PF22666	41 - 200	3e-24	Glycosyl hydrolase 2 galactose-binding domain-like
Glyco_hydro_2	PF00703	211 - 330	5.9e-11	Glycosyl hydrolases family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09010
fragaria_vesca	FvH4_6g05900 FvH4_6g05900 FvH4_6g05900 FvH4_6g05900 FvH4_6g05900 FvH4_6g05900
malus_domestica	MD12G1218800.v1.1 MD12G1218900.v1.1
prunus_persica	Prupe.6G325300_v2.0.a1 Prupe.6G325300_v2.0.a1 Prupe.6G325400_v2.0.a1
pyrus_communis	pycom12g20450 pycom12g20460
rosa_chinensis	RchiOBHm_Chr3g0454891
rosa_laevigata	RLG00000025403
rosa_multiflora	Rmu_sc0001792.1_g000010 Rmu_sc0013126.1_g000001 Rmu_sc0036267.1_g000001
rosa_roxburghii	Rroxscaffold_6G00424690
rosa_rugosa	Rorug03G0002800 Rorug03G0002800
rosa_samantha	Rh3AG062700 Rh3BG064600 Rh3CG063500 Rh3DG064600
rosa_wichuraiana	Rw3G004900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	65
Acc36I	ACCTGC	1 cut(s)	2048
AccB1I	GGYRCC	1 cut(s)	50
AccB7I	CCANNNNNTGG	1 cut(s)	1534
AccII	CGCG	1 cut(s)	835
AciI	CCGC	6 cut(s)	5, 8, 11, 835, 988, 1957
AcoI	YGGCCR	1 cut(s)	887
AcsI	RAATTY	8 cut(s)	319, 439, 877, 1150, 1199, 1244, 1465, 1498
AcuI	CTGAAG	2 cut(s)	785, 1653
AcyI	GRCGYC	1 cut(s)	81
AfaI	GTAC	7 cut(s)	257, 269, 301, 426, 724, 917, 1543
AflIII	ACRYGT	1 cut(s)	2095
AgeI	ACCGGT	2 cut(s)	1019, 1976
AjiI	CACGTC	1 cut(s)	2098
AjnI	CCWGG	3 cut(s)	309, 475, 1834
AleI	CACNNNNGTG	1 cut(s)	1977
Alw21I	GWGCWC	2 cut(s)	861, 1936
Alw26I	GTCTC	1 cut(s)	114
AlwNI	CAGNNNCTG	2 cut(s)	310, 814
Ama87I	CYCGRG	2 cut(s)	37, 54
AoxI	GGCC	6 cut(s)	626, 887, 1090, 1193, 1225, 1609
ApeKI	GCWGC	3 cut(s)	31, 1706, 2081
ApoI	RAATTY	8 cut(s)	319, 439, 877, 1150, 1199, 1244, 1465, 1498
AsiGI	ACCGGT	2 cut(s)	1019, 1976
Asp700I	GAANNNNTTC	1 cut(s)	1785
AspS9I	GGNCC	5 cut(s)	626, 1301, 1309, 1438, 1610
AsuC2I	CCSGG	4 cut(s)	55, 56, 150, 1283
AsuHPI	GGTGA	8 cut(s)	61, 67, 82, 92, 184, 446, 521, 1496
AvaI	CYCGRG	2 cut(s)	37, 54
AvaII	GGWCC	3 cut(s)	1301, 1309, 1438
AxyI	CCTNAGG	3 cut(s)	492, 1442, 1677
BaeGI	GKGCMC	1 cut(s)	366
BalI	TGGCCA	1 cut(s)	889
BamHI	GGATCC	2 cut(s)	193, 1519
BanI	GGYRCC	1 cut(s)	50
BanII	GRGCYC	3 cut(s)	119, 861, 1936
BbsI	GAAGAC	2 cut(s)	29, 1641
Bbv12I	GWGCWC	2 cut(s)	861, 1936
BbvI	GCAGC	3 cut(s)	18, 1718, 2068
BccI	CCATC	7 cut(s)	1082, 1262, 1371, 1458, 1532, 1568, 1721
BceAI	ACGGC	4 cut(s)	125, 220, 1115, 1624
BcgI	CGANNNNNNTGC	1 cut(s)	2136
BciT130I	CCWGG	3 cut(s)	311, 477, 1836
BclI	TGATCA	1 cut(s)	511
BcnI	CCSGG	4 cut(s)	55, 56, 150, 1283
BcoDI	GTCTC	1 cut(s)	114
BfaI	CTAG	2 cut(s)	407, 2139
BfmI	CTRYAG	2 cut(s)	2082, 2124
BfuAI	ACCTGC	1 cut(s)	2048
BisI	GCNGC	6 cut(s)	6, 9, 12, 32, 1707, 2082
BlpI	GCTNAGC	1 cut(s)	1905
BlsI	GCNGC	6 cut(s)	7, 10, 13, 33, 1708, 2083
Bme1390I	CCNGG	7 cut(s)	55, 56, 150, 311, 477, 1283, 1836
Bme18I	GGWCC	3 cut(s)	1301, 1309, 1438
BmeT110I	CYCGRG	2 cut(s)	37, 54
BmgBI	CACGTC	1 cut(s)	2098
BmgT120I	GGNCC	5 cut(s)	626, 1301, 1309, 1438, 1610
BmiI	GGNNCC	7 cut(s)	52, 118, 195, 971, 1361, 1448, 1521
BmrFI	CCNGG	7 cut(s)	55, 56, 150, 311, 477, 1283, 1836
BmsI	GCATC	3 cut(s)	805, 820, 1003
BpiI	GAAGAC	2 cut(s)	29, 1641
BplI	GAGNNNNNCTC	4 cut(s)	472, 504, 2120, 2152
BpmI	CTGGAG	2 cut(s)	1278, 1961
Bpu10I	CCTNAGC	1 cut(s)	855
Bpu1102I	GCTNAGC	1 cut(s)	1905
BpuMI	CCSGG	4 cut(s)	55, 56, 150, 1283
Bsa29I	ATCGAT	1 cut(s)	1565
BsaAI	YACGTR	2 cut(s)	428, 547
BsaHI	GRCGYC	1 cut(s)	81
BsaJI	CCNNGG	7 cut(s)	54, 128, 168, 325, 476, 726, 2006
BsaWI	WCCGGW	2 cut(s)	1019, 1976
BsaXI	ACNNNNNCTCC	2 cut(s)	88, 118
Bse118I	RCCGGY	4 cut(s)	77, 590, 1019, 1976
Bse1I	ACTGG	5 cut(s)	629, 1188, 1261, 1311, 1944
Bse21I	CCTNAGG	3 cut(s)	492, 1442, 1677
BseBI	CCWGG	3 cut(s)	311, 477, 1836
BseCI	ATCGAT	1 cut(s)	1565
BseDI	CCNNGG	7 cut(s)	54, 128, 168, 325, 476, 726, 2006
BseMII	CTCAG	9 cut(s)	317, 506, 696, 821, 846, 1179, 1456, 1668, 1919
BseNI	ACTGG	5 cut(s)	629, 1188, 1261, 1311, 1944
BseRI	GAGGAG	1 cut(s)	480
BseSI	GKGCMC	1 cut(s)	366
BseXI	GCAGC	3 cut(s)	18, 1718, 2068
BsgI	GTGCAG	2 cut(s)	17, 569
Bsh1236I	CGCG	1 cut(s)	835
Bsh1285I	CGRYCG	1 cut(s)	18
BshFI	GGCC	6 cut(s)	628, 889, 1092, 1195, 1227, 1611
BshNI	GGYRCC	1 cut(s)	50
BshTI	ACCGGT	2 cut(s)	1019, 1976
BshVI	ATCGAT	1 cut(s)	1565
BsiEI	CGRYCG	1 cut(s)	18
BsiHKAI	GWGCWC	2 cut(s)	861, 1936
BsiHKCI	CYCGRG	2 cut(s)	37, 54
BsiSI	CCGG	8 cut(s)	55, 78, 149, 191, 591, 1020, 1283, 1977
BslFI	GGGAC	2 cut(s)	71, 1610
BsmAI	GTCTC	1 cut(s)	114
BsmBI	CGTCTC	1 cut(s)	114
BsmFI	GGGAC	2 cut(s)	71, 1610
BsmI	GAATGC	1 cut(s)	400
BsnI	GGCC	6 cut(s)	628, 889, 1092, 1195, 1227, 1611
BsoBI	CYCGRG	2 cut(s)	37, 54
Bsp1286I	GDGCHC	4 cut(s)	119, 366, 861, 1936
Bsp1407I	TGTACA	1 cut(s)	915
Bsp1720I	GCTNAGC	1 cut(s)	1905
BspACI	CCGC	6 cut(s)	5, 8, 11, 835, 988, 1957
BspANI	GGCC	6 cut(s)	628, 889, 1092, 1195, 1227, 1611
BspCNI	CTCAG	9 cut(s)	316, 505, 697, 820, 847, 1180, 1455, 1669, 1918
BspDI	ATCGAT	1 cut(s)	1565
BspFNI	CGCG	1 cut(s)	835
BspHI	TCATGA	2 cut(s)	514, 1846
BspLI	GGNNCC	7 cut(s)	52, 118, 195, 971, 1361, 1448, 1521
BspMAI	CTGCAG	1 cut(s)	2086
BspMI	ACCTGC	1 cut(s)	2048
BspQI	GCTCTTC	2 cut(s)	170, 866
BspT107I	GGYRCC	1 cut(s)	50
BsrFI	RCCGGY	4 cut(s)	77, 590, 1019, 1976
BsrGI	TGTACA	1 cut(s)	915
BsrI	ACTGG	5 cut(s)	629, 1188, 1261, 1311, 1944
BssAI	RCCGGY	4 cut(s)	77, 590, 1019, 1976
BssECI	CCNNGG	7 cut(s)	54, 128, 168, 325, 476, 726, 2006
BssNI	GRCGYC	1 cut(s)	81
BssT1I	CCWWGG	4 cut(s)	128, 168, 726, 2006
Bst2UI	CCWGG	3 cut(s)	311, 477, 1836
Bst4CI	ACNGT	7 cut(s)	73, 157, 434, 934, 1214, 1301, 1345
Bst6I	CTCTTC	2 cut(s)	170, 866
BstACI	GRCGYC	1 cut(s)	81
BstAUI	TGTACA	1 cut(s)	915
BstBAI	YACGTR	2 cut(s)	428, 547
BstC8I	GCNNGC	5 cut(s)	44, 447, 696, 909, 1911
BstDSI	CCRYGG	1 cut(s)	325
BstENI	CCTNNNNNAGG	1 cut(s)	2010
BstFNI	CGCG	1 cut(s)	835
BstMAI	GTCTC	1 cut(s)	114
BstMCI	CGRYCG	1 cut(s)	18
BstMWI	GCNNNNNNNGC	3 cut(s)	11, 48, 1910
BstNI	CCWGG	3 cut(s)	311, 477, 1836
BstNSI	RCATGY	2 cut(s)	698, 1963
BstSCI	CCNGG	7 cut(s)	53, 54, 148, 309, 475, 1281, 1834
BstSFI	CTRYAG	2 cut(s)	2082, 2124
BstSLI	GKGCMC	1 cut(s)	366
BstUI	CGCG	1 cut(s)	835
BstV1I	GCAGC	3 cut(s)	18, 1718, 2068
BstV2I	GAAGAC	2 cut(s)	29, 1641
BstX2I	RGATCY	6 cut(s)	193, 313, 643, 1519, 1746, 1879
BstXI	CCANNNNNNTGG	3 cut(s)	882, 980, 1740
BstYI	RGATCY	6 cut(s)	193, 313, 643, 1519, 1746, 1879
Bsu15I	ATCGAT	1 cut(s)	1565
Bsu36I	CCTNAGG	3 cut(s)	492, 1442, 1677
BsuRI	GGCC	6 cut(s)	628, 889, 1092, 1195, 1227, 1611
BsuTUI	ATCGAT	1 cut(s)	1565
BtgI	CCRYGG	1 cut(s)	325
BtrI	CACGTC	1 cut(s)	2098
BtsI	GCAGTG	1 cut(s)	257
BtsIMutI	CAGTG	7 cut(s)	257, 290, 414, 636, 1304, 1515, 1602
BveI	ACCTGC	1 cut(s)	2048
Cac8I	GCNNGC	5 cut(s)	44, 447, 696, 909, 1911
CaiI	CAGNNNCTG	2 cut(s)	310, 814
CciI	TCATGA	2 cut(s)	514, 1846
Cfr10I	RCCGGY	4 cut(s)	77, 590, 1019, 1976
Cfr13I	GGNCC	5 cut(s)	626, 1301, 1309, 1438, 1610
Cfr9I	CCCGGG	1 cut(s)	54
ClaI	ATCGAT	1 cut(s)	1565
CseI	GACGC	1 cut(s)	70
Csp6I	GTAC	7 cut(s)	256, 268, 300, 425, 723, 916, 1542
CspAI	ACCGGT	2 cut(s)	1019, 1976
CviAII	CATG	8 cut(s)	208, 515, 695, 1139, 1313, 1740, 1847, 1960
CviQI	GTAC	7 cut(s)	256, 268, 300, 425, 723, 916, 1542
DrdI	GACNNNNNNGTC	1 cut(s)	65
DseDI	GACNNNNNNGTC	1 cut(s)	65
EaeI	YGGCCR	1 cut(s)	887
Eam1104I	CTCTTC	2 cut(s)	170, 866
EarI	CTCTTC	2 cut(s)	170, 866
Ecl136II	GAGCTC	2 cut(s)	859, 1934
Eco130I	CCWWGG	4 cut(s)	128, 168, 726, 2006
Eco24I	GRGCYC	3 cut(s)	119, 861, 1936
Eco47I	GGWCC	3 cut(s)	1301, 1309, 1438
Eco53kI	GAGCTC	2 cut(s)	859, 1934
Eco57I	CTGAAG	2 cut(s)	785, 1653
Eco81I	CCTNAGG	3 cut(s)	492, 1442, 1677
Eco88I	CYCGRG	2 cut(s)	37, 54
EcoICRI	GAGCTC	2 cut(s)	859, 1934
EcoNI	CCTNNNNNAGG	1 cut(s)	2010
EcoO109I	RGGNCCY	1 cut(s)	1438
EcoRII	CCWGG	3 cut(s)	309, 475, 1834
EcoT14I	CCWWGG	4 cut(s)	128, 168, 726, 2006
EcoT38I	GRGCYC	3 cut(s)	119, 861, 1936
ErhI	CCWWGG	4 cut(s)	128, 168, 726, 2006
Esp3I	CGTCTC	1 cut(s)	114
FaeI	CATG	8 cut(s)	211, 518, 698, 1142, 1316, 1743, 1850, 1963
FalI	AAGNNNNNCTT	2 cut(s)	896, 928
FaqI	GGGAC	2 cut(s)	71, 1610
FatI	CATG	8 cut(s)	207, 514, 694, 1138, 1312, 1739, 1846, 1959
FauI	CCCGC	2 cut(s)	828, 1964
FauNDI	CATATG	1 cut(s)	596
FbaI	TGATCA	1 cut(s)	511
Fnu4HI	GCNGC	6 cut(s)	6, 9, 12, 32, 1707, 2082
FriOI	GRGCYC	3 cut(s)	119, 861, 1936
Fsp4HI	GCNGC	6 cut(s)	6, 9, 12, 32, 1707, 2082
FspBI	CTAG	2 cut(s)	407, 2139
GluI	GCNGC	6 cut(s)	6, 9, 12, 32, 1707, 2082
GsuI	CTGGAG	2 cut(s)	1278, 1961
HaeIII	GGCC	6 cut(s)	628, 889, 1092, 1195, 1227, 1611
HapII	CCGG	8 cut(s)	55, 78, 149, 191, 591, 1020, 1283, 1977
HgaI	GACGC	1 cut(s)	70
Hin1I	GRCGYC	1 cut(s)	81
Hin1II	CATG	8 cut(s)	211, 518, 698, 1142, 1316, 1743, 1850, 1963
HindIII	AAGCTT	2 cut(s)	1349, 1425
HinfI	GANTC	8 cut(s)	218, 239, 330, 805, 956, 984, 2002, 2142
HpaII	CCGG	8 cut(s)	55, 78, 149, 191, 591, 1020, 1283, 1977
HphI	GGTGA	8 cut(s)	61, 67, 82, 92, 184, 446, 521, 1496
Hpy166II	GTNNAC	7 cut(s)	258, 460, 1181, 1304, 1544, 1970, 2032
Hpy188I	TCNGA	8 cut(s)	318, 804, 961, 1087, 1108, 1166, 1718, 1771
Hpy8I	GTNNAC	7 cut(s)	258, 460, 1181, 1304, 1544, 1970, 2032
Hpy99I	CGWCG	1 cut(s)	146
HpyAV	CCTTC	2 cut(s)	767, 1020
HpyCH4III	ACNGT	7 cut(s)	73, 157, 434, 934, 1214, 1301, 1345
HpyCH4IV	ACGT	3 cut(s)	427, 546, 2097
HpyF10VI	GCNNNNNNNGC	3 cut(s)	11, 48, 1910
HpySE526I	ACGT	3 cut(s)	427, 546, 2097
Hsp92I	GRCGYC	1 cut(s)	81
Hsp92II	CATG	8 cut(s)	211, 518, 698, 1142, 1316, 1743, 1850, 1963
Ksp22I	TGATCA	1 cut(s)	511
LguI	GCTCTTC	2 cut(s)	170, 866
LmnI	GCTCC	3 cut(s)	122, 969, 1452
Lsp1109I	GCAGC	3 cut(s)	18, 1718, 2068
LweI	GCATC	3 cut(s)	805, 820, 1003
MaeI	CTAG	2 cut(s)	407, 2139
MaeII	ACGT	3 cut(s)	427, 546, 2097
MaeIII	GTNAC	8 cut(s)	67, 73, 412, 428, 532, 619, 757, 1115
MboII	GAAGA	8 cut(s)	34, 187, 791, 853, 856, 1646, 1793, 2033
MflI	RGATCY	6 cut(s)	193, 313, 643, 1519, 1746, 1879
MhlI	GDGCHC	4 cut(s)	119, 366, 861, 1936
MlsI	TGGCCA	1 cut(s)	889
MluNI	TGGCCA	1 cut(s)	889
MlyI	GAGTC	4 cut(s)	227, 799, 965, 2151
MmeI	TCCRAC	3 cut(s)	690, 1928, 2125
Mox20I	TGGCCA	1 cut(s)	889
MroXI	GAANNNNTTC	1 cut(s)	1785
MscI	TGGCCA	1 cut(s)	889
MseI	TTAA	3 cut(s)	1155, 1644, 2106
MslI	CAYNNNNRTG	2 cut(s)	1008, 1977
Msp20I	TGGCCA	1 cut(s)	889
MspI	CCGG	8 cut(s)	55, 78, 149, 191, 591, 1020, 1283, 1977
MspR9I	CCNGG	7 cut(s)	55, 56, 150, 311, 477, 1283, 1836
Mva1269I	GAATGC	1 cut(s)	400
MvaI	CCWGG	3 cut(s)	311, 477, 1836
MvnI	CGCG	1 cut(s)	835
MwoI	GCNNNNNNNGC	3 cut(s)	11, 48, 1910
NciI	CCSGG	4 cut(s)	55, 56, 150, 1283
NdeI	CATATG	1 cut(s)	596
NlaIII	CATG	8 cut(s)	211, 518, 698, 1142, 1316, 1743, 1850, 1963
NlaIV	GGNNCC	7 cut(s)	52, 118, 195, 971, 1361, 1448, 1521
NmeAIII	GCCGAG	2 cut(s)	27, 760
NmuCI	GTSAC	5 cut(s)	67, 73, 412, 428, 532
NspI	RCATGY	2 cut(s)	698, 1963
OliI	CACNNNNGTG	1 cut(s)	1977
PaeI	GCATGC	1 cut(s)	698
PagI	TCATGA	2 cut(s)	514, 1846
PciSI	GCTCTTC	2 cut(s)	170, 866
PctI	GAATGC	1 cut(s)	400
PdmI	GAANNNNTTC	1 cut(s)	1785
PfeI	GAWTC	4 cut(s)	239, 330, 984, 2002
PflMI	CCANNNNNTGG	1 cut(s)	1534
PfoI	TCCNGGA	1 cut(s)	148
PinAI	ACCGGT	2 cut(s)	1019, 1976
PkrI	GCNGC	6 cut(s)	7, 10, 13, 33, 1708, 2083
Ple19I	CGATCG	1 cut(s)	18
PleI	GAGTC	4 cut(s)	226, 799, 964, 2150
PpsI	GAGTC	4 cut(s)	226, 799, 964, 2150
Ppu21I	YACGTR	2 cut(s)	428, 547
PpuMI	RGGWCCY	1 cut(s)	1438
Psp124BI	GAGCTC	2 cut(s)	861, 1936
Psp5II	RGGWCCY	1 cut(s)	1438
Psp6I	CCWGG	3 cut(s)	309, 475, 1834
PspGI	CCWGG	3 cut(s)	309, 475, 1834
PspN4I	GGNNCC	7 cut(s)	52, 118, 195, 971, 1361, 1448, 1521
PspPI	GGNCC	5 cut(s)	626, 1301, 1309, 1438, 1610
PspPPI	RGGWCCY	1 cut(s)	1438
PstI	CTGCAG	1 cut(s)	2086
PstNI	CAGNNNCTG	2 cut(s)	310, 814
PsuI	RGATCY	6 cut(s)	193, 313, 643, 1519, 1746, 1879
PvuI	CGATCG	1 cut(s)	18
RsaI	GTAC	7 cut(s)	257, 269, 301, 426, 724, 917, 1543
RsaNI	GTAC	7 cut(s)	256, 268, 300, 425, 723, 916, 1542
RseI	CAYNNNNRTG	2 cut(s)	1008, 1977
SacI	GAGCTC	2 cut(s)	861, 1936
SapI	GCTCTTC	2 cut(s)	170, 866
SaqAI	TTAA	3 cut(s)	1155, 1644, 2106
SatI	GCNGC	6 cut(s)	6, 9, 12, 32, 1707, 2082
Sau96I	GGNCC	5 cut(s)	626, 1301, 1309, 1438, 1610
SchI	GAGTC	4 cut(s)	227, 799, 965, 2151
ScrFI	CCNGG	7 cut(s)	55, 56, 150, 311, 477, 1283, 1836
SduI	GDGCHC	4 cut(s)	119, 366, 861, 1936
SfaNI	GCATC	3 cut(s)	805, 820, 1003
SfcI	CTRYAG	2 cut(s)	2082, 2124
SgrAI	CRCCGGYG	3 cut(s)	77, 1019, 1976
SinI	GGWCC	3 cut(s)	1301, 1309, 1438
SmaI	CCCGGG	1 cut(s)	56
SmiMI	CAYNNNNRTG	2 cut(s)	1008, 1977
SphI	GCATGC	1 cut(s)	698
SsiI	CCGC	6 cut(s)	5, 8, 11, 835, 988, 1957
SspI	AATATT	1 cut(s)	639
SspMI	CTAG	2 cut(s)	407, 2139
SstI	GAGCTC	2 cut(s)	861, 1936
StyD4I	CCNGG	7 cut(s)	53, 54, 148, 309, 475, 1281, 1834
StyI	CCWWGG	4 cut(s)	128, 168, 726, 2006
TaaI	ACNGT	7 cut(s)	73, 157, 434, 934, 1214, 1301, 1345
TaiI	ACGT	3 cut(s)	430, 549, 2100
TaqI	TCGA	3 cut(s)	792, 996, 1565
TatI	WGTACW	1 cut(s)	915
TauI	GCSGC	3 cut(s)	8, 11, 14
TfiI	GAWTC	4 cut(s)	239, 330, 984, 2002
Tru1I	TTAA	3 cut(s)	1155, 1644, 2106
Tru9I	TTAA	3 cut(s)	1155, 1644, 2106
TscAI	CASTG	7 cut(s)	257, 290, 421, 636, 1311, 1515, 1609
TseFI	GTSAC	5 cut(s)	67, 73, 412, 428, 532
TseI	GCWGC	3 cut(s)	31, 1706, 2081
Tsp45I	GTSAC	5 cut(s)	67, 73, 412, 428, 532
TspDTI	ATGAA	9 cut(s)	618, 648, 1048, 1127, 1163, 1410, 1632, 1794, 1835
TspGWI	ACGGA	3 cut(s)	96, 186, 314
TspMI	CCCGGG	1 cut(s)	54
TspRI	CASTG	7 cut(s)	257, 290, 421, 636, 1311, 1515, 1609
Van91I	CCANNNNNTGG	1 cut(s)	1534
VpaK11BI	GGWCC	3 cut(s)	1301, 1309, 1438
XagI	CCTNNNNNAGG	1 cut(s)	2010
XapI	RAATTY	8 cut(s)	319, 439, 877, 1150, 1199, 1244, 1465, 1498
XbaI	TCTAGA	2 cut(s)	406, 2138
XceI	RCATGY	2 cut(s)	698, 1963
XcmI	CCANNNNNNNNNTGG	3 cut(s)	882, 1535, 1797
XmaI	CCCGGG	1 cut(s)	54
XmnI	GAANNNNTTC	1 cut(s)	1785
XspI	CTAG	2 cut(s)	407, 2139

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.