RchiOBHm_Chr3g0454891

Mannosylglycoprotein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
4788720 .. 4794512
5793 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42188

Sequence Viewer

Length: 2928 bp
ATGGCGGCGGCGGCGATCGGGAAGACGAAGCTGCACTCGGGCTGGCTCGGCACCCGGGACAGGGATGTCACCGTCACTGGCGTCCAGCTCACCACCACTCACCCTCCGTCTCTGGGCTCCAAATCTCCTTGGGTGGAAGCCGTCGTTCCGGGAACTGTTTTGGCAACCTTGGTGAAGAGCAAAGAATTGCCGGATCCGTTCTACGGCATGGAAAATGAGTCAATCATAGATATTGCTGATTCAGGGAGGCAGTGGTACACATTTTGGTACTTTACAACATTTCAGTGTAAGCTGTCAGGTACTCAGCACCTGGATCTGAATTTCCGTGGAATCAATTACTATGCAGAGGTATATTTGAATGGGCACAAAAAGGACATCCCAAGAGGGATGTTTCAAAGGCATTCTCTAGATGTCACTGATATAGTACGTGACGGTGAAAATTTGCTTGCTGTTGTCGTTTACCCCCCAGATCATCCTGGGAGTATTCCTCCTCAGGGTGGGCAAGGTGGTGATCATGAGATTGGGAAAGATGTGACCACACAATACGTGCAGGGTTGGGATTGGATGTGTCCTATAAGGGATAGAAACACCGGCATATGGGATGAAGTGTCAATTTATGTAACAGGGCCAGTGAAAATATTAGATCCCCACTTGGTTTCATCATTTTATGACAATTACAAGAGGGTGTATTTGCATGCAACGACTGAGTTGGAAAATAGAAGTACCTCCATTGCCGATTGTTCTTTGAATATCCAAGTTACAACAGAACTTGAAGGAAACATTTGTTTAGTCGAGCATCTTCAGACTCAGCATCTGTCAATCCCTGCTGGATCGCGGGTGCAATATACATTTCCTGAGCTCTTCTTCTACAAGCCAAATTTATGGTGGCCAAATGGTATGGGAAAGCAAGCCTTGTACAATGTTGTTATTACTGTTGATGTAAAGGGATATGGAGAGTCTGATTTGTGGAGCCAATTATTTGGATTCCGCAAAATCGAGAGCCACATTGATGATGCCACCGGTGGAAGGTTGTTCAAGGTCAATGGTCAGCCTATTTTCATTCGTGGTGGTAATTGGATATTGTCAGATGGCCTCCTACGGCTTTCAGAAAAGCGTTACAAAACAGACATCAAGTTTCATGCAGATATGAATTTTAACATGATCCGATGTTGGGGTGGTGGACTGGCTGAGAGGCCAGAATTTTATTATTACTGTGATATTTATGGCCTGTTGGTCTGGCAAGAATTTTGGATTACTGGAGATGTAGATGGACGAGGTGCCCCGGTATCAAATCCAAACGGTCCACTGGACCATGATCTTTTCTTGCTATGTGCAAGAGATACTGTCAAGCTTCTAAGGAACCATCCAAGTCTCGCTCTTTGGGTGGGAGGAAATGAACAAATCCCACCCGATGACATCAACAAAGCTTTGAAACAGGACCTCAGGCTCCATCCACATTTTGAAAATTCCATAAATGGTAGTGGTGAGTATGTTGAAAATTTGAAGTCAGTGTCAAAGGATCCAAGCCAATATCTGGATGGTACACGCATTTACATACAAGGATCAATGTGGGATGGATTTGCAAATGGAAAGGGGGACTACACTGACGGCCCTTATGAAATCCAAAATCCTGAAGACTTCTTTAAGGATGATTTTTACAAATATGGGTTCAATCCTGAGGTTGGTTCAGTAGGTATGCCTGTTGCAGCTACCATCAGAGCGACAATGCTTCCAGAAGCATGGCAGATCCCTTTGTTCAACAAAGTTTCTGATGATTATGAAGAAGTTCCAAACCCTGTCTGGGAATACCATAAATACATACCTTATTCAAAACCAGGCAAGGTTCATGACCAGATTTTACTCTATGGGTTTCCAAAGGATCTTGATGACTTTTGCTTACAGGCTCAGCTTGCTAACTATATTCAGTATAGAGCTCTACTGGAGGGTTGGACTTCCCGCATGTGGAGTAAATACACCGGTCTTTTGATTTGGAAAACACAGAATCCTTGGACAGGTCTTAGAGGTCAATTTTACGATCATCTTCTTGACCAAACAGCAGGTTTCTATGGCTGTCGCTGTGCTGCAGAGCCAATACACGTCCAACTTAACTTGGCTACTTATTATATAGAGGTTGTAAATACTACATCAGAGGAATTATCGGACATTGCTATTGAAGCATCAGTGTGGGATCTGGATGGAACATGCCCATACTACAAAGTTCATGAAAATCTGTCAATGCCGCCAAAAAGAACAGTACCGATTGCTGAGATGAAATATCCAAAATCTAGAAACCCAAAACCTGTGTACTTTCTTCTTCTCAAACTGTATCACAAGTCAAATTTTCGCATTATCTCCAGGAACTTTTACTGGTTGCATCTTTCTGGTGGGGATTACAAGCTGTTAGAACCATACCGAAAGAAAAGAGTTCCACTCAAGATTATATCTGAGGTCTTCATCAAAGGAACCACCTACGAAATGCACATGAATGTGAAGAACACATCTGTGAAACCACCGCCTAAAACTTTAACCTATCAGAATCATTTCACCCCTAAACTTGGTGATGGTGATTTTGATATCCACTCAGTGGAGCCTAAACCTGATGGAGCAGACGAAAAACATGAAGTTGGTTTTCTACAGAAGATATATAGGCATTTTACGAAGGAAACTGATGGTTTGAGGGTTGCTGAAATCAATGGCTCTGATGTTGGTGTTGCCTTCTTCCTTCATTTTTCTGTTCATGGAGTAAAGAAGGACCATAAGGAAGGAGAAGACACAAGAATTCTTCCTGTTCATTACACTGACAACTACTTCTCACTGGTGCCAGGTGAGTCCATGCCCATCAAGATCACTTTTGAGGTCCCTCCTGGTGTGACCCCCCGACTTACTCTTCAAGGATGGAATTATCATGGTGCCCATAGAGTCCATTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

975

Amino Acids

111.32

Weight (kDa)

6.06

Isoelectric Point (pI)

30.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_2_N2 PF22666 41 - 200 4.9e-24 Glycosyl hydrolase 2 galactose-binding domain-like
Glyco_hydro_2 PF00703 211 - 330 9.5e-11 Glycosyl hydrolases family 2
Ig_GlcNase PF18368 898 - 967 5e-09 Exo-beta-D-glucosaminidase Ig-fold domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 65
Acc36I ACCTGC 1 cut(s) 2048
AccB1I GGYRCC 4 cut(s) 50, 1277, 2818, 2909
AccB7I CCANNNNNTGG 2 cut(s) 1534, 2584
AccII CGCG 1 cut(s) 835
AciI CCGC 8 cut(s) 5, 8, 11, 835, 988, 1957, 2240, 2513
AcoI YGGCCR 1 cut(s) 887
AcuI CTGAAG 2 cut(s) 785, 1653
AcyI GRCGYC 1 cut(s) 81
AdeI CACNNNGTG 1 cut(s) 2584
AfaI GTAC 9 cut(s) 257, 269, 301, 426, 724, 917, 1543, 2256, 2306
AflIII ACRYGT 1 cut(s) 2095
AgeI ACCGGT 2 cut(s) 1019, 1976
AjiI CACGTC 1 cut(s) 2098
AjnI CCWGG 6 cut(s) 309, 475, 1834, 2354, 2821, 2863
AleI CACNNNNGTG 1 cut(s) 2501
Alw21I GWGCWC 2 cut(s) 861, 1936
Alw26I GTCTC 2 cut(s) 114, 1376
AlwNI CAGNNNCTG 2 cut(s) 310, 814
Ama87I CYCGRG 2 cut(s) 37, 54
AoxI GGCC 6 cut(s) 626, 887, 1090, 1193, 1225, 1609
ApeKI GCWGC 3 cut(s) 31, 1706, 2081
AsiGI ACCGGT 2 cut(s) 1019, 1976
Asp700I GAANNNNTTC 2 cut(s) 1785, 2540
AspS9I GGNCC 7 cut(s) 626, 1301, 1309, 1438, 1610, 2752, 2857
AsuC2I CCSGG 4 cut(s) 55, 56, 150, 1283
AvaI CYCGRG 2 cut(s) 37, 54
AvaII GGWCC 5 cut(s) 1301, 1309, 1438, 2752, 2857
AxyI CCTNAGG 3 cut(s) 492, 1442, 1677
BaeGI GKGCMC 3 cut(s) 366, 1282, 2914
BalI TGGCCA 1 cut(s) 889
BamHI GGATCC 2 cut(s) 193, 1519
BanI GGYRCC 4 cut(s) 50, 1277, 2818, 2909
BanII GRGCYC 3 cut(s) 119, 861, 1936
BbsI GAAGAC 4 cut(s) 29, 1641, 2443, 2775
Bbv12I GWGCWC 2 cut(s) 861, 1936
BbvI GCAGC 3 cut(s) 18, 1718, 2068
BceAI ACGGC 4 cut(s) 125, 220, 1115, 1624
BciT130I CCWGG 6 cut(s) 311, 477, 1836, 2356, 2823, 2865
BclI TGATCA 1 cut(s) 511
BcnI CCSGG 4 cut(s) 55, 56, 150, 1283
BcoDI GTCTC 2 cut(s) 114, 1376
BfaI CTAG 2 cut(s) 407, 2286
BfmI CTRYAG 2 cut(s) 2082, 2633
BfuAI ACCTGC 1 cut(s) 2048
BisI GCNGC 7 cut(s) 6, 9, 12, 32, 1707, 2082, 2240
BlpI GCTNAGC 1 cut(s) 1905
BlsI GCNGC 7 cut(s) 7, 10, 13, 33, 1708, 2083, 2241
Bme18I GGWCC 5 cut(s) 1301, 1309, 1438, 2752, 2857
BmeT110I CYCGRG 2 cut(s) 37, 54
BmgBI CACGTC 1 cut(s) 2098
BmgT120I GGNCC 7 cut(s) 626, 1301, 1309, 1438, 1610, 2752, 2857
BmsI GCATC 5 cut(s) 805, 820, 1003, 2186, 2383
BpiI GAAGAC 4 cut(s) 29, 1641, 2443, 2775
BplI GAGNNNNNCTC 4 cut(s) 472, 504, 2415, 2447
BpmI CTGGAG 3 cut(s) 1278, 1961, 2338
Bpu10I CCTNAGC 1 cut(s) 855
Bpu1102I GCTNAGC 1 cut(s) 1905
BpuEI CTTGAG 1 cut(s) 2417
BpuMI CCSGG 4 cut(s) 55, 56, 150, 1283
BsaAI YACGTR 2 cut(s) 428, 547
BsaHI GRCGYC 1 cut(s) 81
BsaJI CCNNGG 7 cut(s) 54, 128, 168, 325, 476, 1281, 2006
BsaWI WCCGGW 2 cut(s) 1019, 1976
BsaXI ACNNNNNCTCC 2 cut(s) 88, 118
Bse118I RCCGGY 3 cut(s) 590, 1019, 1976
Bse1I ACTGG 8 cut(s) 82, 629, 1188, 1261, 1311, 1944, 2372, 2820
Bse21I CCTNAGG 3 cut(s) 492, 1442, 1677
Bse3DI GCAATG 2 cut(s) 729, 2163
BseBI CCWGG 6 cut(s) 311, 477, 1836, 2356, 2823, 2865
BseDI CCNNGG 7 cut(s) 54, 128, 168, 325, 476, 1281, 2006
BseMI GCAATG 2 cut(s) 729, 2163
BseNI ACTGG 8 cut(s) 82, 629, 1188, 1261, 1311, 1944, 2372, 2820
BseRI GAGGAG 1 cut(s) 480
BseSI GKGCMC 3 cut(s) 366, 1282, 2914
BseXI GCAGC 3 cut(s) 18, 1718, 2068
BsgI GTGCAG 2 cut(s) 17, 569
Bsh1236I CGCG 1 cut(s) 835
Bsh1285I CGRYCG 1 cut(s) 18
BshFI GGCC 6 cut(s) 628, 889, 1092, 1195, 1227, 1611
BshNI GGYRCC 4 cut(s) 50, 1277, 2818, 2909
BshTI ACCGGT 2 cut(s) 1019, 1976
BsiEI CGRYCG 1 cut(s) 18
BsiHKAI GWGCWC 2 cut(s) 861, 1936
BsiHKCI CYCGRG 2 cut(s) 37, 54
BsiSI CCGG 7 cut(s) 55, 149, 191, 591, 1020, 1283, 1977
BslFI GGGAC 3 cut(s) 71, 1610, 2843
BsmAI GTCTC 2 cut(s) 114, 1376
BsmBI CGTCTC 1 cut(s) 114
BsmFI GGGAC 3 cut(s) 71, 1610, 2843
BsmI GAATGC 1 cut(s) 400
BsnI GGCC 6 cut(s) 628, 889, 1092, 1195, 1227, 1611
BsoBI CYCGRG 2 cut(s) 37, 54
Bsp1286I GDGCHC 6 cut(s) 119, 366, 861, 1282, 1936, 2914
Bsp1407I TGTACA 1 cut(s) 915
Bsp1720I GCTNAGC 1 cut(s) 1905
BspACI CCGC 8 cut(s) 5, 8, 11, 835, 988, 1957, 2240, 2513
BspANI GGCC 6 cut(s) 628, 889, 1092, 1195, 1227, 1611
BspFNI CGCG 1 cut(s) 835
BspHI TCATGA 3 cut(s) 514, 1846, 2221
BspMAI CTGCAG 1 cut(s) 2086
BspMI ACCTGC 1 cut(s) 2048
BspQI GCTCTTC 2 cut(s) 170, 866
BspT107I GGYRCC 4 cut(s) 50, 1277, 2818, 2909
BsrDI GCAATG 2 cut(s) 729, 2163
BsrFI RCCGGY 3 cut(s) 590, 1019, 1976
BsrGI TGTACA 1 cut(s) 915
BsrI ACTGG 8 cut(s) 82, 629, 1188, 1261, 1311, 1944, 2372, 2820
BssAI RCCGGY 3 cut(s) 590, 1019, 1976
BssECI CCNNGG 7 cut(s) 54, 128, 168, 325, 476, 1281, 2006
BssNI GRCGYC 1 cut(s) 81
BssT1I CCWWGG 3 cut(s) 128, 168, 2006
Bst2UI CCWGG 6 cut(s) 311, 477, 1836, 2356, 2823, 2865
Bst4CI ACNGT 9 cut(s) 73, 157, 434, 934, 1214, 1301, 1345, 2254, 2325
Bst6I CTCTTC 3 cut(s) 170, 866, 2892
BstACI GRCGYC 1 cut(s) 81
BstAUI TGTACA 1 cut(s) 915
BstBAI YACGTR 2 cut(s) 428, 547
BstC8I GCNNGC 5 cut(s) 44, 447, 696, 909, 1911
BstDSI CCRYGG 1 cut(s) 325
BstENI CCTNNNNNAGG 1 cut(s) 2010
BstFNI CGCG 1 cut(s) 835
BstMAI GTCTC 2 cut(s) 114, 1376
BstMCI CGRYCG 1 cut(s) 18
BstMWI GCNNNNNNNGC 4 cut(s) 11, 48, 1910, 2174
BstNI CCWGG 6 cut(s) 311, 477, 1836, 2356, 2823, 2865
BstNSI RCATGY 3 cut(s) 698, 1963, 2205
BstSFI CTRYAG 2 cut(s) 2082, 2633
BstSLI GKGCMC 3 cut(s) 366, 1282, 2914
BstUI CGCG 1 cut(s) 835
BstV1I GCAGC 3 cut(s) 18, 1718, 2068
BstV2I GAAGAC 4 cut(s) 29, 1641, 2443, 2775
BstX2I RGATCY 7 cut(s) 193, 313, 643, 1519, 1746, 1879, 2188
BstXI CCANNNNNNTGG 3 cut(s) 882, 980, 1740
BstYI RGATCY 7 cut(s) 193, 313, 643, 1519, 1746, 1879, 2188
Bsu36I CCTNAGG 3 cut(s) 492, 1442, 1677
BsuRI GGCC 6 cut(s) 628, 889, 1092, 1195, 1227, 1611
BtgI CCRYGG 1 cut(s) 325
BtrI CACGTC 1 cut(s) 2098
BtsI GCAGTG 1 cut(s) 257
BveI ACCTGC 1 cut(s) 2048
Cac8I GCNNGC 5 cut(s) 44, 447, 696, 909, 1911
CaiI CAGNNNCTG 2 cut(s) 310, 814
CciI TCATGA 3 cut(s) 514, 1846, 2221
Cfr10I RCCGGY 3 cut(s) 590, 1019, 1976
Cfr13I GGNCC 7 cut(s) 626, 1301, 1309, 1438, 1610, 2752, 2857
Cfr9I CCCGGG 1 cut(s) 54
CseI GACGC 1 cut(s) 70
Csp6I GTAC 9 cut(s) 256, 268, 300, 425, 723, 916, 1542, 2255, 2305
CspAI ACCGGT 2 cut(s) 1019, 1976
CviQI GTAC 9 cut(s) 256, 268, 300, 425, 723, 916, 1542, 2255, 2305
DraIII CACNNNGTG 1 cut(s) 2584
DrdI GACNNNNNNGTC 1 cut(s) 65
DseDI GACNNNNNNGTC 1 cut(s) 65
EaeI YGGCCR 1 cut(s) 887
Eam1104I CTCTTC 3 cut(s) 170, 866, 2892
EarI CTCTTC 3 cut(s) 170, 866, 2892
Ecl136II GAGCTC 2 cut(s) 859, 1934
Eco130I CCWWGG 3 cut(s) 128, 168, 2006
Eco24I GRGCYC 3 cut(s) 119, 861, 1936
Eco32I GATATC 1 cut(s) 2575
Eco47I GGWCC 5 cut(s) 1301, 1309, 1438, 2752, 2857
Eco53kI GAGCTC 2 cut(s) 859, 1934
Eco57I CTGAAG 2 cut(s) 785, 1653
Eco81I CCTNAGG 3 cut(s) 492, 1442, 1677
Eco88I CYCGRG 2 cut(s) 37, 54
EcoICRI GAGCTC 2 cut(s) 859, 1934
EcoNI CCTNNNNNAGG 1 cut(s) 2010
EcoO109I RGGNCCY 2 cut(s) 1438, 2857
EcoRI GAATTC 1 cut(s) 2778
EcoRII CCWGG 6 cut(s) 309, 475, 1834, 2354, 2821, 2863
EcoRV GATATC 1 cut(s) 2575
EcoT14I CCWWGG 3 cut(s) 128, 168, 2006
EcoT38I GRGCYC 3 cut(s) 119, 861, 1936
ErhI CCWWGG 3 cut(s) 128, 168, 2006
Esp3I CGTCTC 1 cut(s) 114
FalI AAGNNNNNCTT 2 cut(s) 896, 928
FaqI GGGAC 3 cut(s) 71, 1610, 2843
FauI CCCGC 2 cut(s) 828, 1964
FauNDI CATATG 1 cut(s) 596
FbaI TGATCA 1 cut(s) 511
Fnu4HI GCNGC 7 cut(s) 6, 9, 12, 32, 1707, 2082, 2240
FriOI GRGCYC 3 cut(s) 119, 861, 1936
Fsp4HI GCNGC 7 cut(s) 6, 9, 12, 32, 1707, 2082, 2240
FspBI CTAG 2 cut(s) 407, 2286
GluI GCNGC 7 cut(s) 6, 9, 12, 32, 1707, 2082, 2240
GsuI CTGGAG 3 cut(s) 1278, 1961, 2338
HaeIII GGCC 6 cut(s) 628, 889, 1092, 1195, 1227, 1611
HapII CCGG 7 cut(s) 55, 149, 191, 591, 1020, 1283, 1977
HgaI GACGC 1 cut(s) 70
Hin1I GRCGYC 1 cut(s) 81
HindIII AAGCTT 2 cut(s) 1349, 1425
HpaII CCGG 7 cut(s) 55, 149, 191, 591, 1020, 1283, 1977
Hpy166II GTNNAC 6 cut(s) 258, 460, 1181, 1304, 1544, 2305
Hpy8I GTNNAC 6 cut(s) 258, 460, 1181, 1304, 1544, 2305
Hpy99I CGWCG 1 cut(s) 146
HpyAV CCTTC 7 cut(s) 767, 1020, 2653, 2725, 2732, 2743, 2756
HpyCH4III ACNGT 9 cut(s) 73, 157, 434, 934, 1214, 1301, 1345, 2254, 2325
HpyCH4IV ACGT 3 cut(s) 427, 546, 2097
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 48, 1910, 2174
HpySE526I ACGT 3 cut(s) 427, 546, 2097
Hsp92I GRCGYC 1 cut(s) 81
Ksp22I TGATCA 1 cut(s) 511
LguI GCTCTTC 2 cut(s) 170, 866
LmnI GCTCC 5 cut(s) 122, 969, 1452, 2587, 2603
Lsp1109I GCAGC 3 cut(s) 18, 1718, 2068
LweI GCATC 5 cut(s) 805, 820, 1003, 2186, 2383
MaeI CTAG 2 cut(s) 407, 2286
MaeII ACGT 3 cut(s) 427, 546, 2097
MaeIII GTNAC 9 cut(s) 67, 73, 412, 428, 532, 619, 757, 1115, 2869
MflI RGATCY 7 cut(s) 193, 313, 643, 1519, 1746, 1879, 2188
MhlI GDGCHC 6 cut(s) 119, 366, 861, 1282, 1936, 2914
MlsI TGGCCA 1 cut(s) 889
MluNI TGGCCA 1 cut(s) 889
MlyI GAGTC 5 cut(s) 227, 799, 965, 2837, 2928
MmeI TCCRAC 3 cut(s) 690, 1928, 2125
Mox20I TGGCCA 1 cut(s) 889
MroXI GAANNNNTTC 2 cut(s) 1785, 2540
MscI TGGCCA 1 cut(s) 889
MseI TTAA 4 cut(s) 1155, 1644, 2106, 2525
MslI CAYNNNNRTG 6 cut(s) 283, 1008, 2182, 2484, 2486, 2501
Msp20I TGGCCA 1 cut(s) 889
MspI CCGG 7 cut(s) 55, 149, 191, 591, 1020, 1283, 1977
Mva1269I GAATGC 1 cut(s) 400
MvaI CCWGG 6 cut(s) 311, 477, 1836, 2356, 2823, 2865
MvnI CGCG 1 cut(s) 835
MwoI GCNNNNNNNGC 4 cut(s) 11, 48, 1910, 2174
NciI CCSGG 4 cut(s) 55, 56, 150, 1283
NdeI CATATG 1 cut(s) 596
NmeAIII GCCGAG 1 cut(s) 27
NmuCI GTSAC 6 cut(s) 67, 73, 412, 428, 532, 2869
NspI RCATGY 3 cut(s) 698, 1963, 2205
OliI CACNNNNGTG 1 cut(s) 2501
PaeI GCATGC 1 cut(s) 698
PagI TCATGA 3 cut(s) 514, 1846, 2221
PciSI GCTCTTC 2 cut(s) 170, 866
PctI GAATGC 1 cut(s) 400
PdmI GAANNNNTTC 2 cut(s) 1785, 2540
PfeI GAWTC 5 cut(s) 239, 330, 984, 2002, 2536
PflMI CCANNNNNTGG 2 cut(s) 1534, 2584
PfoI TCCNGGA 2 cut(s) 148, 2354
PinAI ACCGGT 2 cut(s) 1019, 1976
PkrI GCNGC 7 cut(s) 7, 10, 13, 33, 1708, 2083, 2241
Ple19I CGATCG 1 cut(s) 18
PleI GAGTC 5 cut(s) 226, 799, 964, 2836, 2927
PpsI GAGTC 5 cut(s) 226, 799, 964, 2836, 2927
Ppu21I YACGTR 2 cut(s) 428, 547
PpuMI RGGWCCY 2 cut(s) 1438, 2857
Psp124BI GAGCTC 2 cut(s) 861, 1936
Psp5II RGGWCCY 2 cut(s) 1438, 2857
Psp6I CCWGG 6 cut(s) 309, 475, 1834, 2354, 2821, 2863
PspGI CCWGG 6 cut(s) 309, 475, 1834, 2354, 2821, 2863
PspPI GGNCC 7 cut(s) 626, 1301, 1309, 1438, 1610, 2752, 2857
PspPPI RGGWCCY 2 cut(s) 1438, 2857
PstI CTGCAG 1 cut(s) 2086
PstNI CAGNNNCTG 2 cut(s) 310, 814
PsuI RGATCY 7 cut(s) 193, 313, 643, 1519, 1746, 1879, 2188
PvuI CGATCG 1 cut(s) 18
RsaI GTAC 9 cut(s) 257, 269, 301, 426, 724, 917, 1543, 2256, 2306
RsaNI GTAC 9 cut(s) 256, 268, 300, 425, 723, 916, 1542, 2255, 2305
RseI CAYNNNNRTG 6 cut(s) 283, 1008, 2182, 2484, 2486, 2501
SacI GAGCTC 2 cut(s) 861, 1936
SapI GCTCTTC 2 cut(s) 170, 866
SaqAI TTAA 4 cut(s) 1155, 1644, 2106, 2525
SatI GCNGC 7 cut(s) 6, 9, 12, 32, 1707, 2082, 2240
Sau96I GGNCC 7 cut(s) 626, 1301, 1309, 1438, 1610, 2752, 2857
SchI GAGTC 5 cut(s) 227, 799, 965, 2837, 2928
SduI GDGCHC 6 cut(s) 119, 366, 861, 1282, 1936, 2914
SfaNI GCATC 5 cut(s) 805, 820, 1003, 2186, 2383
SfcI CTRYAG 2 cut(s) 2082, 2633
SgrAI CRCCGGYG 1 cut(s) 1019
SinI GGWCC 5 cut(s) 1301, 1309, 1438, 2752, 2857
SmaI CCCGGG 1 cut(s) 56
SmiMI CAYNNNNRTG 6 cut(s) 283, 1008, 2182, 2484, 2486, 2501
SmlI CTYRAG 1 cut(s) 2432
SmoI CTYRAG 1 cut(s) 2432
SphI GCATGC 1 cut(s) 698
SsiI CCGC 8 cut(s) 5, 8, 11, 835, 988, 1957, 2240, 2513
SspI AATATT 1 cut(s) 639
SspMI CTAG 2 cut(s) 407, 2286
SstI GAGCTC 2 cut(s) 861, 1936
StyI CCWWGG 3 cut(s) 128, 168, 2006
TaaI ACNGT 9 cut(s) 73, 157, 434, 934, 1214, 1301, 1345, 2254, 2325
TaiI ACGT 3 cut(s) 430, 549, 2100
TaqI TCGA 2 cut(s) 792, 996
TatI WGTACW 2 cut(s) 915, 2304
TauI GCSGC 4 cut(s) 8, 11, 14, 2242
TfiI GAWTC 5 cut(s) 239, 330, 984, 2002, 2536
Tru1I TTAA 4 cut(s) 1155, 1644, 2106, 2525
Tru9I TTAA 4 cut(s) 1155, 1644, 2106, 2525
TseFI GTSAC 6 cut(s) 67, 73, 412, 428, 532, 2869
TseI GCWGC 3 cut(s) 31, 1706, 2081
Tsp45I GTSAC 6 cut(s) 67, 73, 412, 428, 532, 2869
TspGWI ACGGA 3 cut(s) 96, 186, 314
TspMI CCCGGG 1 cut(s) 54
Van91I CCANNNNNTGG 2 cut(s) 1534, 2584
VpaK11BI GGWCC 5 cut(s) 1301, 1309, 1438, 2752, 2857
XagI CCTNNNNNAGG 1 cut(s) 2010
XbaI TCTAGA 2 cut(s) 406, 2285
XceI RCATGY 3 cut(s) 698, 1963, 2205
XcmI CCANNNNNNNNNTGG 3 cut(s) 882, 1535, 1797
XmaI CCCGGG 1 cut(s) 54
XmnI GAANNNNTTC 2 cut(s) 1785, 2540
XspI CTAG 2 cut(s) 407, 2286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.