Rmu_sc0036267.1_g000001

Mannosylglycoprotein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0036267.1
Physical Location & Seq
Reverse (-)
1 .. 3531
3531 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0036267.1_g000001.1.cds

Sequence Viewer

Length: 1923 bp
atggaaaatgagtcaatcatagatattgctgattcagggaggcagtggtacacattttggtactttacaacctttcagtgtaagctgtcaggtactcagcacctggatctgaatttccgtggaatcaattactatgcagaggtatatttgaatgggcacaaaaaggacatcccaagagggatgtttcaaaggcattctctagatgtcactgatatagtacgtgacggtgaaaatttgcttgctgttgtcgtttaccccccggatcatcctgggagtattcctcctcagggtgggcaaggtggtgatcatgagattgggaaagatgtgactacacaatacgtgcagggttgggattggatgtgtcctataagggatagaaacaccggcatatgggatgaagtgtcaatttatgtaacagggccagtgaaaatattagatccccacttggtttcatcattttatgacaattacaagagggtgtatttgcatgcaacgactgagttggaaaatagaagtacctcggttgccgagtgttctttgaatatccaagttacaacagaacttgaaggaaacatttgtttagtcgagcatcttcagactcagcatctgtcaatccctgctggattgcgggtgcaatatacatttcctgagctcttcttctacaagccaaatttatggtggccaaatggtatgggaaagcaagccttgtacaatgttgttattactattgatgtaaagggatatggagagtctgatttgtggagccaattatttggattccgcaaaatcgagagccacattgatgatgccaccggtggaaggttgttcaaggtcaatggtcagcctattttcattcgtggtggaaattggatattgtcagatggcctcctacggctttcagaaaagcgttacaaaacagacatcaagtttcatgcagatatgaattttaacatgatccgatgttggggtggtggactggctgagaggccagaattttattattactgtgatatttatggcctgttggtctggcaagaattttggattactggtgatgtagatggacgaggtgtcccggtatcaaatccaaacggtccactggaccatgatcttttcttgctatgtgcaagagatactgtcaagcttctaaggaaccatccaagtcttgctctttgggtgggaggaaatgaacaaatcccacccgatgacatcaacaaagctttgaaacaggacctcaggctccatccacattttgaaaattccataaatggtagtggtgagtatgttgaaaatttgaagtcagtgtcaaaggatccaagccaatatctggatggtacacgcatttacatacaaggatcgatgtgggatggatttgcaaatggaaagggggactacactgatggcccttatgaaatccaaaatcctgaagacttctttaaggatgatttttacaaatatgggttcaatcctgaggttggttcagtaggtatgcctgttgcagctaccatcagagcgacaatgcttccagaagcatggcagatccctttgttcaacaaagtttcctatgattatgaagaagttccaaaccctgtctgggaataccataaatacataccttattcaaaaccaggcaaggttcatgaccagattttactctatgggtttccaaaggatcttgatgacttttgcttacaggctcagcttgctaactatattcagtatagagctctactggagggttggacttcccgcatgtggagtaaatacaccggtgttttgatttggaaaacacagaatccttggacaggtcttagaggtcaagtttacgatcatcttcttgaccaaacagcaggtttctatggctgtcgctgtgctgcagagccaatacacgtccaacttaacttggctacttattctatagag
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

641

Amino Acids

73.59

Weight (kDa)

5.27

Isoelectric Point (pI)

30.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1841
AccB7I CCANNNNNTGG 1 cut(s) 1327
AciI CCGC 3 cut(s) 628, 781, 1750
AclWI GGATC 9 cut(s) 114, 270, 431, 949, 1307, 1320, 1363, 1534, 1680
AcoI YGGCCR 1 cut(s) 680
AcsI RAATTY 8 cut(s) 112, 232, 670, 943, 992, 1037, 1258, 1291
AcuI CTGAAG 2 cut(s) 578, 1446
AfaI GTAC 7 cut(s) 50, 62, 94, 219, 517, 710, 1336
AflIII ACRYGT 1 cut(s) 1888
AgeI ACCGGT 2 cut(s) 812, 1769
AhdI GACNNNNNGTC 1 cut(s) 1070
AjiI CACGTC 1 cut(s) 1891
AjnI CCWGG 3 cut(s) 102, 268, 1627
AluBI AGCT 7 cut(s) 85, 652, 1144, 1220, 1502, 1702, 1727
AluI AGCT 7 cut(s) 85, 652, 1144, 1220, 1502, 1702, 1727
Alw21I GWGCWC 2 cut(s) 654, 1729
AlwI GGATC 9 cut(s) 114, 270, 431, 949, 1307, 1320, 1363, 1534, 1680
AlwNI CAGNNNCTG 2 cut(s) 103, 607
AoxI GGCC 6 cut(s) 419, 680, 883, 986, 1018, 1402
ApeKI GCWGC 2 cut(s) 1499, 1874
ApoI RAATTY 8 cut(s) 112, 232, 670, 943, 992, 1037, 1258, 1291
AsiGI ACCGGT 2 cut(s) 812, 1769
Asp700I GAANNNNTTC 1 cut(s) 1578
AspS9I GGNCC 5 cut(s) 419, 1094, 1102, 1231, 1403
AsuC2I CCSGG 2 cut(s) 260, 1076
AsuHPI GGTGA 4 cut(s) 239, 314, 1064, 1289
AvaII GGWCC 3 cut(s) 1094, 1102, 1231
AxyI CCTNAGG 3 cut(s) 285, 1235, 1470
BaeGI GKGCMC 1 cut(s) 159
BalI TGGCCA 1 cut(s) 682
BamHI GGATCC 1 cut(s) 1312
BanII GRGCYC 2 cut(s) 654, 1729
BbsI GAAGAC 1 cut(s) 1434
Bbv12I GWGCWC 2 cut(s) 654, 1729
BbvI GCAGC 2 cut(s) 1511, 1861
BccI CCATC 8 cut(s) 875, 1055, 1164, 1251, 1325, 1361, 1394, 1514
BceAI ACGGC 1 cut(s) 908
BciT130I CCWGG 3 cut(s) 104, 270, 1629
BclI TGATCA 1 cut(s) 304
BcnI CCSGG 2 cut(s) 260, 1076
BfaI CTAG 1 cut(s) 200
BfmI CTRYAG 2 cut(s) 1875, 1917
BfuAI ACCTGC 1 cut(s) 1841
BisI GCNGC 2 cut(s) 1500, 1875
BlpI GCTNAGC 1 cut(s) 1698
BlsI GCNGC 2 cut(s) 1501, 1876
Bme1390I CCNGG 5 cut(s) 104, 260, 270, 1076, 1629
Bme18I GGWCC 3 cut(s) 1094, 1102, 1231
BmeRI GACNNNNNGTC 1 cut(s) 1070
BmgBI CACGTC 1 cut(s) 1891
BmgT120I GGNCC 5 cut(s) 419, 1094, 1102, 1231, 1403
BmiI GGNNCC 4 cut(s) 764, 1154, 1241, 1314
BmrFI CCNGG 5 cut(s) 104, 260, 270, 1076, 1629
BmsI GCATC 3 cut(s) 598, 613, 796
BpiI GAAGAC 1 cut(s) 1434
BplI GAGNNNNNCTC 2 cut(s) 265, 297
BpmI CTGGAG 1 cut(s) 1754
Bpu10I CCTNAGC 1 cut(s) 648
Bpu1102I GCTNAGC 1 cut(s) 1698
BpuMI CCSGG 2 cut(s) 260, 1076
Bsa29I ATCGAT 1 cut(s) 1358
BsaAI YACGTR 2 cut(s) 221, 340
BsaJI CCNNGG 5 cut(s) 118, 258, 269, 519, 1799
BsaWI WCCGGW 2 cut(s) 812, 1769
Bse118I RCCGGY 3 cut(s) 383, 812, 1769
Bse1I ACTGG 5 cut(s) 422, 981, 1054, 1104, 1737
Bse21I CCTNAGG 3 cut(s) 285, 1235, 1470
BseBI CCWGG 3 cut(s) 104, 270, 1629
BseCI ATCGAT 1 cut(s) 1358
BseDI CCNNGG 5 cut(s) 118, 258, 269, 519, 1799
BseMII CTCAG 9 cut(s) 110, 299, 489, 614, 639, 972, 1249, 1461, 1712
BseNI ACTGG 5 cut(s) 422, 981, 1054, 1104, 1737
BseRI GAGGAG 1 cut(s) 273
BseSI GKGCMC 1 cut(s) 159
BseXI GCAGC 2 cut(s) 1511, 1861
BsgI GTGCAG 1 cut(s) 362
BshFI GGCC 6 cut(s) 421, 682, 885, 988, 1020, 1404
BshTI ACCGGT 2 cut(s) 812, 1769
BshVI ATCGAT 1 cut(s) 1358
BsiHKAI GWGCWC 2 cut(s) 654, 1729
BsiSI CCGG 5 cut(s) 260, 384, 813, 1076, 1770
BslFI GGGAC 2 cut(s) 1058, 1403
BsmFI GGGAC 2 cut(s) 1058, 1403
BsmI GAATGC 1 cut(s) 193
BsnI GGCC 6 cut(s) 421, 682, 885, 988, 1020, 1404
Bsp1286I GDGCHC 3 cut(s) 159, 654, 1729
Bsp1407I TGTACA 1 cut(s) 708
Bsp1720I GCTNAGC 1 cut(s) 1698
BspACI CCGC 3 cut(s) 628, 781, 1750
BspANI GGCC 6 cut(s) 421, 682, 885, 988, 1020, 1404
BspCNI CTCAG 9 cut(s) 109, 298, 490, 613, 640, 973, 1248, 1462, 1711
BspDI ATCGAT 1 cut(s) 1358
BspHI TCATGA 2 cut(s) 307, 1639
BspLI GGNNCC 4 cut(s) 764, 1154, 1241, 1314
BspMAI CTGCAG 1 cut(s) 1879
BspMI ACCTGC 1 cut(s) 1841
BspPI GGATC 9 cut(s) 114, 270, 431, 949, 1307, 1320, 1363, 1534, 1680
BspQI GCTCTTC 1 cut(s) 659
BsrFI RCCGGY 3 cut(s) 383, 812, 1769
BsrGI TGTACA 1 cut(s) 708
BsrI ACTGG 5 cut(s) 422, 981, 1054, 1104, 1737
BssAI RCCGGY 3 cut(s) 383, 812, 1769
BssECI CCNNGG 5 cut(s) 118, 258, 269, 519, 1799
BssT1I CCWWGG 1 cut(s) 1799
Bst2UI CCWGG 3 cut(s) 104, 270, 1629
Bst4CI ACNGT 4 cut(s) 227, 1007, 1094, 1138
Bst6I CTCTTC 1 cut(s) 659
BstAUI TGTACA 1 cut(s) 708
BstBAI YACGTR 2 cut(s) 221, 340
BstC8I GCNNGC 4 cut(s) 240, 489, 702, 1704
BstDSI CCRYGG 1 cut(s) 118
BstENI CCTNNNNNAGG 1 cut(s) 1803
BstMWI GCNNNNNNNGC 1 cut(s) 1703
BstNI CCWGG 3 cut(s) 104, 270, 1629
BstNSI RCATGY 2 cut(s) 491, 1756
BstSCI CCNGG 5 cut(s) 102, 258, 268, 1074, 1627
BstSFI CTRYAG 2 cut(s) 1875, 1917
BstSLI GKGCMC 1 cut(s) 159
BstV1I GCAGC 2 cut(s) 1511, 1861
BstV2I GAAGAC 1 cut(s) 1434
BstX2I RGATCY 5 cut(s) 106, 436, 1312, 1539, 1672
BstXI CCANNNNNNTGG 3 cut(s) 675, 773, 1533
BstYI RGATCY 5 cut(s) 106, 436, 1312, 1539, 1672
Bsu15I ATCGAT 1 cut(s) 1358
Bsu36I CCTNAGG 3 cut(s) 285, 1235, 1470
BsuRI GGCC 6 cut(s) 421, 682, 885, 988, 1020, 1404
BsuTUI ATCGAT 1 cut(s) 1358
BtgI CCRYGG 1 cut(s) 118
BtrI CACGTC 1 cut(s) 1891
BtsI GCAGTG 1 cut(s) 50
BtsIMutI CAGTG 7 cut(s) 50, 83, 207, 429, 1097, 1308, 1395
BveI ACCTGC 1 cut(s) 1841
Cac8I GCNNGC 4 cut(s) 240, 489, 702, 1704
CaiI CAGNNNCTG 2 cut(s) 103, 607
CciI TCATGA 2 cut(s) 307, 1639
Cfr10I RCCGGY 3 cut(s) 383, 812, 1769
Cfr13I GGNCC 5 cut(s) 419, 1094, 1102, 1231, 1403
ClaI ATCGAT 1 cut(s) 1358
Csp6I GTAC 7 cut(s) 49, 61, 93, 218, 516, 709, 1335
CspAI ACCGGT 2 cut(s) 812, 1769
CviAII CATG 8 cut(s) 308, 488, 932, 952, 1106, 1533, 1640, 1753
CviQI GTAC 7 cut(s) 49, 61, 93, 218, 516, 709, 1335
DriI GACNNNNNGTC 1 cut(s) 1070
EaeI YGGCCR 1 cut(s) 680
Eam1104I CTCTTC 1 cut(s) 659
Eam1105I GACNNNNNGTC 1 cut(s) 1070
EarI CTCTTC 1 cut(s) 659
Ecl136II GAGCTC 2 cut(s) 652, 1727
Eco130I CCWWGG 1 cut(s) 1799
Eco24I GRGCYC 2 cut(s) 654, 1729
Eco47I GGWCC 3 cut(s) 1094, 1102, 1231
Eco53kI GAGCTC 2 cut(s) 652, 1727
Eco57I CTGAAG 2 cut(s) 578, 1446
Eco81I CCTNAGG 3 cut(s) 285, 1235, 1470
EcoICRI GAGCTC 2 cut(s) 652, 1727
EcoNI CCTNNNNNAGG 1 cut(s) 1803
EcoO109I RGGNCCY 1 cut(s) 1231
EcoRII CCWGG 3 cut(s) 102, 268, 1627
EcoT14I CCWWGG 1 cut(s) 1799
EcoT38I GRGCYC 2 cut(s) 654, 1729
ErhI CCWWGG 1 cut(s) 1799
FaeI CATG 8 cut(s) 311, 491, 935, 955, 1109, 1536, 1643, 1756
FalI AAGNNNNNCTT 2 cut(s) 689, 721
FaqI GGGAC 2 cut(s) 1058, 1403
FatI CATG 8 cut(s) 307, 487, 931, 951, 1105, 1532, 1639, 1752
FauI CCCGC 2 cut(s) 621, 1757
FauNDI CATATG 1 cut(s) 389
FbaI TGATCA 1 cut(s) 304
Fnu4HI GCNGC 2 cut(s) 1500, 1875
FriOI GRGCYC 2 cut(s) 654, 1729
Fsp4HI GCNGC 2 cut(s) 1500, 1875
FspBI CTAG 1 cut(s) 200
GluI GCNGC 2 cut(s) 1500, 1875
GsuI CTGGAG 1 cut(s) 1754
HaeIII GGCC 6 cut(s) 421, 682, 885, 988, 1020, 1404
HapII CCGG 5 cut(s) 260, 384, 813, 1076, 1770
Hin1II CATG 8 cut(s) 311, 491, 935, 955, 1109, 1536, 1643, 1756
HindIII AAGCTT 2 cut(s) 1142, 1218
HinfI GANTC 7 cut(s) 11, 32, 123, 598, 749, 777, 1795
HpaII CCGG 5 cut(s) 260, 384, 813, 1076, 1770
HphI GGTGA 4 cut(s) 239, 314, 1064, 1289
Hpy166II GTNNAC 6 cut(s) 51, 253, 974, 1097, 1337, 1825
Hpy188I TCNGA 7 cut(s) 111, 597, 754, 880, 901, 959, 1511
Hpy8I GTNNAC 6 cut(s) 51, 253, 974, 1097, 1337, 1825
HpyAV CCTTC 2 cut(s) 560, 813
HpyCH4III ACNGT 4 cut(s) 227, 1007, 1094, 1138
HpyCH4IV ACGT 3 cut(s) 220, 339, 1890
HpyF10VI GCNNNNNNNGC 1 cut(s) 1703
HpySE526I ACGT 3 cut(s) 220, 339, 1890
Hsp92II CATG 8 cut(s) 311, 491, 935, 955, 1109, 1536, 1643, 1756
Ksp22I TGATCA 1 cut(s) 304
LguI GCTCTTC 1 cut(s) 659
LmnI GCTCC 2 cut(s) 762, 1245
Lsp1109I GCAGC 2 cut(s) 1511, 1861
LweI GCATC 3 cut(s) 598, 613, 796
MaeI CTAG 1 cut(s) 200
MaeII ACGT 3 cut(s) 220, 339, 1890
MaeIII GTNAC 6 cut(s) 205, 221, 325, 412, 550, 908
MboII GAAGA 6 cut(s) 584, 646, 649, 1439, 1586, 1826
MflI RGATCY 5 cut(s) 106, 436, 1312, 1539, 1672
MhlI GDGCHC 3 cut(s) 159, 654, 1729
MlsI TGGCCA 1 cut(s) 682
MluNI TGGCCA 1 cut(s) 682
MlyI GAGTC 3 cut(s) 20, 592, 758
MmeI TCCRAC 3 cut(s) 483, 1721, 1918
Mox20I TGGCCA 1 cut(s) 682
MroXI GAANNNNTTC 1 cut(s) 1578
MscI TGGCCA 1 cut(s) 682
MseI TTAA 3 cut(s) 948, 1437, 1899
MslI CAYNNNNRTG 1 cut(s) 801
Msp20I TGGCCA 1 cut(s) 682
MspI CCGG 5 cut(s) 260, 384, 813, 1076, 1770
MspR9I CCNGG 5 cut(s) 104, 260, 270, 1076, 1629
Mva1269I GAATGC 1 cut(s) 193
MvaI CCWGG 3 cut(s) 104, 270, 1629
MwoI GCNNNNNNNGC 1 cut(s) 1703
NciI CCSGG 2 cut(s) 260, 1076
NdeI CATATG 1 cut(s) 389
NlaIII CATG 8 cut(s) 311, 491, 935, 955, 1109, 1536, 1643, 1756
NlaIV GGNNCC 4 cut(s) 764, 1154, 1241, 1314
NmeAIII GCCGAG 1 cut(s) 553
NmuCI GTSAC 3 cut(s) 205, 221, 325
NspI RCATGY 2 cut(s) 491, 1756
PaeI GCATGC 1 cut(s) 491
PagI TCATGA 2 cut(s) 307, 1639
PciSI GCTCTTC 1 cut(s) 659
PctI GAATGC 1 cut(s) 193
PdmI GAANNNNTTC 1 cut(s) 1578
PfeI GAWTC 4 cut(s) 32, 123, 777, 1795
PflMI CCANNNNNTGG 1 cut(s) 1327
PinAI ACCGGT 2 cut(s) 812, 1769
PkrI GCNGC 2 cut(s) 1501, 1876
PleI GAGTC 3 cut(s) 19, 592, 757
PpsI GAGTC 3 cut(s) 19, 592, 757
Ppu21I YACGTR 2 cut(s) 221, 340
PpuMI RGGWCCY 1 cut(s) 1231
Psp124BI GAGCTC 2 cut(s) 654, 1729
Psp5II RGGWCCY 1 cut(s) 1231
Psp6I CCWGG 3 cut(s) 102, 268, 1627
PspGI CCWGG 3 cut(s) 102, 268, 1627
PspN4I GGNNCC 4 cut(s) 764, 1154, 1241, 1314
PspPI GGNCC 5 cut(s) 419, 1094, 1102, 1231, 1403
PspPPI RGGWCCY 1 cut(s) 1231
PstI CTGCAG 1 cut(s) 1879
PstNI CAGNNNCTG 2 cut(s) 103, 607
PsuI RGATCY 5 cut(s) 106, 436, 1312, 1539, 1672
RsaI GTAC 7 cut(s) 50, 62, 94, 219, 517, 710, 1336
RsaNI GTAC 7 cut(s) 49, 61, 93, 218, 516, 709, 1335
RseI CAYNNNNRTG 1 cut(s) 801
SacI GAGCTC 2 cut(s) 654, 1729
SapI GCTCTTC 1 cut(s) 659
SaqAI TTAA 3 cut(s) 948, 1437, 1899
SatI GCNGC 2 cut(s) 1500, 1875
Sau96I GGNCC 5 cut(s) 419, 1094, 1102, 1231, 1403
SchI GAGTC 3 cut(s) 20, 592, 758
ScrFI CCNGG 5 cut(s) 104, 260, 270, 1076, 1629
SduI GDGCHC 3 cut(s) 159, 654, 1729
SfaNI GCATC 3 cut(s) 598, 613, 796
SfcI CTRYAG 2 cut(s) 1875, 1917
SgrAI CRCCGGYG 2 cut(s) 812, 1769
SinI GGWCC 3 cut(s) 1094, 1102, 1231
SmiMI CAYNNNNRTG 1 cut(s) 801
SphI GCATGC 1 cut(s) 491
SsiI CCGC 3 cut(s) 628, 781, 1750
SspI AATATT 1 cut(s) 432
SspMI CTAG 1 cut(s) 200
SstI GAGCTC 2 cut(s) 654, 1729
StyD4I CCNGG 5 cut(s) 102, 258, 268, 1074, 1627
StyI CCWWGG 1 cut(s) 1799
TaaI ACNGT 4 cut(s) 227, 1007, 1094, 1138
TaiI ACGT 3 cut(s) 223, 342, 1893
TaqI TCGA 3 cut(s) 585, 789, 1358
TatI WGTACW 1 cut(s) 708
TfiI GAWTC 4 cut(s) 32, 123, 777, 1795
Tru1I TTAA 3 cut(s) 948, 1437, 1899
Tru9I TTAA 3 cut(s) 948, 1437, 1899
TscAI CASTG 7 cut(s) 50, 83, 214, 429, 1104, 1308, 1402
TseFI GTSAC 3 cut(s) 205, 221, 325
TseI GCWGC 2 cut(s) 1499, 1874
Tsp45I GTSAC 3 cut(s) 205, 221, 325
TspDTI ATGAA 9 cut(s) 411, 441, 841, 920, 956, 1203, 1425, 1587, 1628
TspGWI ACGGA 1 cut(s) 107
TspRI CASTG 7 cut(s) 50, 83, 214, 429, 1104, 1308, 1402
Van91I CCANNNNNTGG 1 cut(s) 1327
VpaK11BI GGWCC 3 cut(s) 1094, 1102, 1231
XagI CCTNNNNNAGG 1 cut(s) 1803
XapI RAATTY 8 cut(s) 112, 232, 670, 943, 992, 1037, 1258, 1291
XbaI TCTAGA 1 cut(s) 199
XceI RCATGY 2 cut(s) 491, 1756
XcmI CCANNNNNNNNNTGG 3 cut(s) 675, 1328, 1590
XmnI GAANNNNTTC 1 cut(s) 1578
XspI CTAG 1 cut(s) 200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.