MD13G1005200.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0012945
Physical Location & Seq
Forward (+)
331104 .. 333902
2799 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1005200.v1.1.491

Sequence Viewer

Length: 1278 bp
ATGATTTCCATGGCAGAAATCCAAAAGAAAACCATTACTCCCACTCCTAGTCCTATAACCACTCCTACTCCGTCCACTTCCAAACCAAAACACAGTTTGTTTCTCGCTTGCTTCGGATTTTCCAGGCAAACGAGTCGCAGACGGAGTATGAGATCAAAGTCGCCCCCCCTCATCCGAAAGGAAGCTAACTATACCAGAGAAGATAATCGCGATGACCGTACGATTGATATGAAGGGTGAACATTCAACTAGTATTACTAGTCAACGCAGCTGTTATTTGATTTCTTGGTCAAGCTGGAGGTTTCGCACCAAGAAGTCCGCCGCCAGAACCGTCCCCATCGACACCTCCGGTACCACCGTCACCGACAAAAGGGAACGTCCGTCCAAGGTGGTCAAGTTTTCCAGCTTGCAGACCAAGTCAAAGTCAAAGTCAAAGTCTGGTAACCTCGTCTCTAACTCCGAAGAAGTACTTCCGGCCACCACCGATGGGGAGCCGCCAGGGACTCCAAGTCGGGAAGAGGCTGAGCCTCCTCCCATCGTCTCAGACCCGCAGACCCCTATTAACCATAACCCTCCACAGACCAACACGATCAACCTCGAAAGTAGGAAACATTTGGAGTCCCCTAAGGTTGGCACGTGTCAAAAGCGATTTTGCAGGAAGATTGATTCACTAAGAACAAGTACAACTATTGCAGGAAGAAAAGGACCACCTAGCAGCCAAAGCCAACCAGATTCACCGGCTGGACAGGAGGCCAGGACGCGCACGTCGCGTACTCGGACAGTGTCGCACTCCGTGTCTTTCCCCGCTCGCGAAAGCCAAACTCAACAGGGGGCGCCGGTGACTCCGTCCGTGGCACACAATTTTAGTAAACAATATTCGTCGTGGTCGTGGTCGACTACCGTGTCCAACAACCCCGGATCGAAAAATAATAATAGGGGGAAGGCTAAGGCAAAGGGAGAGTCGAGTACTGCAGCCAACAGGAAGAATTTGGATCCACTGATTGGTATGTCTATTATTTTGGTGACGTTGATTATTATGTTAGTATGGGGTCGTTTGTGTGCTATTCTTTGTACGTCCGCATGGTTTTACTTGCTCCCGCGCTTAAGATCAGCGGCGGCCGCCACCACTACTGCTGCTGATGGATCTGGATACCCTCACCATAATTCCAGTTCCAATGTTAATACCCCGCGGGCCATGGATATGAATTCCGAAGAATGGAAGAAGAAGGTCGTCTTAGAGGGATTTCTTGAGAGGAATCACCGGAATATAATTCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

426

Amino Acids

46.92

Weight (kDa)

10.32

Isoelectric Point (pI)

53.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012945)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08240 AT5G23160
fragaria_vesca FvH4_4g36960
malus_domestica MD13G1005200.v1.1 MD16G1002700.v1.1
prunus_persica Prupe.1G347600_v2.0.a1
pyrus_communis pycom13g00440 pycom16g00320
rosa_chinensis RchiOBHm_Chr4g0446731
rosa_laevigata RLG00000005635
rosa_multiflora Rmu_sc0001753.1_g000035
rosa_roxburghii Rroxscaffold_5G00387070
rosa_rugosa Rorug04G0374300
rosa_samantha Rh4AG435700 Rh4BG444500 Rh4CG461800 Rh4DG443500
rosa_wichuraiana Rw4G037240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 763, 901
Acc65I GGTACC 1 cut(s) 350
AccB1I GGYRCC 2 cut(s) 350, 832
AccB7I CCANNNNNTGG 1 cut(s) 1001
AccBSI CCGCTC 1 cut(s) 806
AccI GTMKAC 1 cut(s) 893
AccII CGCG 6 cut(s) 210, 760, 769, 810, 1099, 1189
AclWI GGATC 4 cut(s) 925, 986, 999, 1150
AcoI YGGCCR 2 cut(s) 474, 1116
AcsI RAATTY 2 cut(s) 985, 1204
AcvI CACGTG 1 cut(s) 636
AcyI GRCGYC 1 cut(s) 833
AdeI CACNNNGTG 1 cut(s) 793
AfaI GTAC 7 cut(s) 220, 352, 468, 682, 772, 967, 1072
AfiI CCNNNNNNNGG 5 cut(s) 369, 486, 629, 1001, 1215
AflII CTTAAG 1 cut(s) 1102
AflIII ACRYGT 1 cut(s) 635
AgsI TTSAA 1 cut(s) 246
AhdI GACNNNNNGTC 1 cut(s) 507
AhlI ACTAGT 2 cut(s) 248, 257
AjiI CACGTC 1 cut(s) 765
AjnI CCWGG 3 cut(s) 122, 496, 752
AluBI AGCT 4 cut(s) 185, 270, 294, 405
AluI AGCT 4 cut(s) 185, 270, 294, 405
Alw26I GTCTC 2 cut(s) 454, 544
AlwI GGATC 4 cut(s) 925, 986, 999, 1150
AoxI GGCC 4 cut(s) 474, 750, 1116, 1191
ApeKI GCWGC 4 cut(s) 267, 714, 971, 1133
ApoI RAATTY 2 cut(s) 985, 1204
ArsI GACNNNNNNTTYG 6 cut(s) 413, 419, 445, 451, 944, 976
Asp700I GAANNNNTTC 1 cut(s) 468
Asp718I GGTACC 1 cut(s) 350
AspLEI GCGC 3 cut(s) 762, 835, 1101
AspS9I GGNCC 2 cut(s) 704, 1191
AsuC2I CCSGG 1 cut(s) 915
AsuHPI GGTGA 7 cut(s) 248, 352, 726, 850, 1033, 1148, 1250
AvaII GGWCC 1 cut(s) 704
AxyI CCTNAGG 1 cut(s) 624
BaeI ACNNNNGTAYC 2 cut(s) 342, 375
BamHI GGATCC 1 cut(s) 991
BanI GGYRCC 2 cut(s) 350, 832
BbrPI CACGTG 1 cut(s) 636
BbvI GCAGC 4 cut(s) 279, 726, 983, 1120
BccI CCATC 4 cut(s) 344, 479, 542, 1133
BcgI CGANNNNNNTGC 2 cut(s) 116, 150
BciT130I CCWGG 3 cut(s) 124, 498, 754
BciVI GTATCC 1 cut(s) 1142
BcnI CCSGG 1 cut(s) 915
BcoDI GTCTC 2 cut(s) 454, 544
BcuI ACTAGT 2 cut(s) 248, 257
BfaI CTAG 4 cut(s) 48, 249, 258, 711
BfmI CTRYAG 1 cut(s) 969
BfoI RGCGCY 1 cut(s) 836
BfrI CTTAAG 1 cut(s) 1102
BfuI GTATCC 1 cut(s) 1142
BisI GCNGC 9 cut(s) 268, 321, 494, 715, 972, 1113, 1116, 1119, 1134
BlpI GCTNAGC 1 cut(s) 522
BlsI GCNGC 9 cut(s) 269, 322, 495, 716, 973, 1114, 1117, 1120, 1135
BmcAI AGTACT 2 cut(s) 468, 967
Bme1390I CCNGG 4 cut(s) 124, 498, 754, 915
Bme18I GGWCC 1 cut(s) 704
BmeRI GACNNNNNGTC 1 cut(s) 507
BmgBI CACGTC 1 cut(s) 765
BmgT120I GGNCC 2 cut(s) 704, 1191
BmiI GGNNCC 4 cut(s) 352, 492, 834, 993
BmrFI CCNGG 4 cut(s) 124, 498, 754, 915
BpmI CTGGAG 1 cut(s) 316
Bpu10I CCTNAGC 1 cut(s) 945
Bpu1102I GCTNAGC 1 cut(s) 522
BpuEI CTTGAG 1 cut(s) 1268
BpuMI CCSGG 1 cut(s) 915
BsaAI YACGTR 1 cut(s) 636
BsaHI GRCGYC 1 cut(s) 833
BsaJI CCNNGG 7 cut(s) 9, 384, 497, 849, 913, 1187, 1194
BsaWI WCCGGW 2 cut(s) 347, 1260
BsaXI ACNNNNNCTCC 6 cut(s) 22, 28, 52, 52, 58, 82
Bsc4I CCNNNNNNNGG 5 cut(s) 369, 486, 629, 1001, 1215
Bse118I RCCGGY 2 cut(s) 736, 835
Bse1I ACTGG 1 cut(s) 1167
Bse21I CCTNAGG 1 cut(s) 624
BseBI CCWGG 3 cut(s) 124, 498, 754
BseDI CCNNGG 7 cut(s) 9, 384, 497, 849, 913, 1187, 1194
BseGI GGATG 1 cut(s) 171
BseLI CCNNNNNNNGG 5 cut(s) 369, 486, 629, 1001, 1215
BseMII CTCAG 2 cut(s) 513, 555
BseNI ACTGG 1 cut(s) 1167
BseRI GAGGAG 1 cut(s) 519
BseX3I CGGCCG 1 cut(s) 1116
BseXI GCAGC 4 cut(s) 279, 726, 983, 1120
Bsh1236I CGCG 6 cut(s) 210, 760, 769, 810, 1099, 1189
Bsh1285I CGRYCG 1 cut(s) 1119
BshFI GGCC 4 cut(s) 476, 752, 1118, 1193
BshNI GGYRCC 2 cut(s) 350, 832
BsiEI CGRYCG 1 cut(s) 1119
BsiSI CCGG 6 cut(s) 348, 473, 737, 836, 915, 1261
BsiWI CGTACG 1 cut(s) 218
BslFI GGGAC 3 cut(s) 317, 514, 604
BslI CCNNNNNNNGG 5 cut(s) 369, 486, 629, 1001, 1215
BsmAI GTCTC 2 cut(s) 454, 544
BsmBI CGTCTC 2 cut(s) 454, 544
BsmFI GGGAC 3 cut(s) 317, 514, 604
BsnI GGCC 4 cut(s) 476, 752, 1118, 1193
Bsp143I GATC 6 cut(s) 152, 588, 917, 991, 1106, 1142
Bsp1720I GCTNAGC 1 cut(s) 522
Bsp19I CCATGG 2 cut(s) 9, 1194
Bsp68I TCGCGA 2 cut(s) 210, 810
BspANI GGCC 4 cut(s) 476, 752, 1118, 1193
BspCNI CTCAG 2 cut(s) 514, 554
BspFNI CGCG 6 cut(s) 210, 760, 769, 810, 1099, 1189
BspLI GGNNCC 4 cut(s) 352, 492, 834, 993
BspMAI CTGCAG 1 cut(s) 973
BspPI GGATC 4 cut(s) 925, 986, 999, 1150
BspT107I GGYRCC 2 cut(s) 350, 832
BspTI CTTAAG 1 cut(s) 1102
BsrBI CCGCTC 1 cut(s) 806
BsrFI RCCGGY 2 cut(s) 736, 835
BsrI ACTGG 1 cut(s) 1167
BssAI RCCGGY 2 cut(s) 736, 835
BssECI CCNNGG 7 cut(s) 9, 384, 497, 849, 913, 1187, 1194
BssMI GATC 6 cut(s) 152, 588, 917, 991, 1106, 1142
BssNI GRCGYC 1 cut(s) 833
BssT1I CCWWGG 3 cut(s) 9, 384, 1194
Bst2UI CCWGG 3 cut(s) 124, 498, 754
Bst4CI ACNGT 6 cut(s) 95, 218, 331, 358, 781, 901
Bst6I CTCTTC 1 cut(s) 510
BstACI GRCGYC 1 cut(s) 833
BstAFI CTTAAG 1 cut(s) 1102
BstBAI YACGTR 1 cut(s) 636
BstC8I GCNNGC 4 cut(s) 109, 407, 808, 1191
BstDEI CTNAG 6 cut(s) 522, 541, 624, 671, 945, 1234
BstDSI CCRYGG 4 cut(s) 9, 849, 1187, 1194
BstEII GGTNACC 1 cut(s) 440
BstF5I GGATG 1 cut(s) 171
BstFNI CGCG 6 cut(s) 210, 760, 769, 810, 1099, 1189
BstH2I RGCGCY 1 cut(s) 836
BstHHI GCGC 3 cut(s) 762, 835, 1101
BstKTI GATC 6 cut(s) 155, 591, 920, 994, 1109, 1145
BstMAI GTCTC 2 cut(s) 454, 544
BstMBI GATC 6 cut(s) 152, 588, 917, 991, 1106, 1142
BstMCI CGRYCG 1 cut(s) 1119
BstMWI GCNNNNNNNGC 3 cut(s) 720, 766, 1118
BstNI CCWGG 3 cut(s) 124, 498, 754
BstPI GGTNACC 1 cut(s) 440
BstSCI CCNGG 4 cut(s) 122, 496, 752, 913
BstSFI CTRYAG 1 cut(s) 969
BstUI CGCG 6 cut(s) 210, 760, 769, 810, 1099, 1189
BstV1I GCAGC 4 cut(s) 279, 726, 983, 1120
BstX2I RGATCY 2 cut(s) 991, 1142
BstYI RGATCY 2 cut(s) 991, 1142
BstZI CGGCCG 1 cut(s) 1116
Bsu36I CCTNAGG 1 cut(s) 624
BsuI GTATCC 1 cut(s) 1142
BsuRI GGCC 4 cut(s) 476, 752, 1118, 1193
BtgI CCRYGG 4 cut(s) 9, 849, 1187, 1194
BtgZI GCGATG 1 cut(s) 225
BtrI CACGTC 1 cut(s) 765
BtsCI GGATG 1 cut(s) 171
BtsIMutI CAGTG 2 cut(s) 786, 995
BtuMI TCGCGA 2 cut(s) 210, 810
Cac8I GCNNGC 4 cut(s) 109, 407, 808, 1191
CciNI GCGGCCGC 1 cut(s) 1116
CfoI GCGC 3 cut(s) 762, 835, 1101
Cfr10I RCCGGY 2 cut(s) 736, 835
Cfr13I GGNCC 2 cut(s) 704, 1191
Cfr42I CCGCGG 1 cut(s) 1190
CseI GACGC 1 cut(s) 766
Csp6I GTAC 7 cut(s) 219, 351, 467, 681, 771, 966, 1071
CviAII CATG 3 cut(s) 10, 1080, 1195
CviQI GTAC 7 cut(s) 219, 351, 467, 681, 771, 966, 1071
DdeI CTNAG 6 cut(s) 522, 541, 624, 671, 945, 1234
DinI GGCGCC 1 cut(s) 834
DpnI GATC 6 cut(s) 154, 590, 919, 993, 1108, 1144
DpnII GATC 6 cut(s) 152, 588, 917, 991, 1106, 1142
DraIII CACNNNGTG 1 cut(s) 793
DrdI GACNNNNNNGTC 2 cut(s) 763, 901
DriI GACNNNNNGTC 1 cut(s) 507
DseDI GACNNNNNNGTC 2 cut(s) 763, 901
EaeI YGGCCR 2 cut(s) 474, 1116
EagI CGGCCG 1 cut(s) 1116
Eam1104I CTCTTC 1 cut(s) 510
Eam1105I GACNNNNNGTC 1 cut(s) 507
EarI CTCTTC 1 cut(s) 510
EciI GGCGGA 1 cut(s) 307
EclXI CGGCCG 1 cut(s) 1116
Eco130I CCWWGG 3 cut(s) 9, 384, 1194
Eco47I GGWCC 1 cut(s) 704
Eco52I CGGCCG 1 cut(s) 1116
Eco72I CACGTG 1 cut(s) 636
Eco81I CCTNAGG 1 cut(s) 624
Eco91I GGTNACC 1 cut(s) 440
EcoO65I GGTNACC 1 cut(s) 440
EcoRI GAATTC 1 cut(s) 1204
EcoRII CCWGG 3 cut(s) 122, 496, 752
EcoT14I CCWWGG 3 cut(s) 9, 384, 1194
EgeI GGCGCC 1 cut(s) 834
EheI GGCGCC 1 cut(s) 834
ErhI CCWWGG 3 cut(s) 9, 384, 1194
Esp3I CGTCTC 2 cut(s) 454, 544
FaeI CATG 3 cut(s) 13, 1083, 1198
FalI AAGNNNNNCTT 4 cut(s) 453, 485, 1217, 1249
FaqI GGGAC 3 cut(s) 317, 514, 604
FatI CATG 3 cut(s) 9, 1079, 1194
FauI CCCGC 5 cut(s) 555, 811, 1104, 1182, 1194
FblI GTMKAC 1 cut(s) 893
Fnu4HI GCNGC 9 cut(s) 268, 321, 494, 715, 972, 1113, 1116, 1119, 1134
FokI GGATG 1 cut(s) 158
Fsp4HI GCNGC 9 cut(s) 268, 321, 494, 715, 972, 1113, 1116, 1119, 1134
FspBI CTAG 4 cut(s) 48, 249, 258, 711
GlaI GCGC 3 cut(s) 761, 834, 1100
GluI GCNGC 9 cut(s) 268, 321, 494, 715, 972, 1113, 1116, 1119, 1134
GsuI CTGGAG 1 cut(s) 316
HaeII RGCGCY 1 cut(s) 836
HaeIII GGCC 4 cut(s) 476, 752, 1118, 1193
HapII CCGG 6 cut(s) 348, 473, 737, 836, 915, 1261
HgaI GACGC 1 cut(s) 766
HhaI GCGC 3 cut(s) 762, 835, 1101
Hin1I GRCGYC 1 cut(s) 833
Hin1II CATG 3 cut(s) 13, 1083, 1198
Hin6I GCGC 3 cut(s) 760, 833, 1099
HinP1I GCGC 3 cut(s) 760, 833, 1099
HincII GTYRAC 2 cut(s) 263, 894
HindII GTYRAC 2 cut(s) 263, 894
HinfI GANTC 8 cut(s) 133, 502, 617, 665, 731, 841, 959, 1255
HpaII CCGG 6 cut(s) 348, 473, 737, 836, 915, 1261
HphI GGTGA 7 cut(s) 248, 352, 726, 850, 1033, 1148, 1250
Hpy166II GTNNAC 5 cut(s) 75, 239, 263, 869, 894
Hpy188I TCNGA 6 cut(s) 116, 176, 460, 544, 777, 1210
Hpy188III TCNNGA 5 cut(s) 209, 512, 809, 1146, 1247
Hpy8I GTNNAC 5 cut(s) 75, 239, 263, 869, 894
Hpy99I CGWCG 2 cut(s) 769, 883
HpyAV CCTTC 3 cut(s) 226, 934, 1219
HpyCH4III ACNGT 6 cut(s) 95, 218, 331, 358, 781, 901
HpyCH4IV ACGT 5 cut(s) 376, 635, 764, 1025, 1073
HpyCH4V TGCA 4 cut(s) 409, 654, 692, 971
HpyF10VI GCNNNNNNNGC 3 cut(s) 720, 766, 1118
HpyF3I CTNAG 6 cut(s) 522, 541, 624, 671, 945, 1234
HpySE526I ACGT 5 cut(s) 376, 635, 764, 1025, 1073
Hsp92I GRCGYC 1 cut(s) 833
Hsp92II CATG 3 cut(s) 13, 1083, 1198
HspAI GCGC 3 cut(s) 760, 833, 1099
KasI GGCGCC 1 cut(s) 832
KpnI GGTACC 1 cut(s) 354
KspI CCGCGG 1 cut(s) 1190
Kzo9I GATC 6 cut(s) 152, 588, 917, 991, 1106, 1142
LmnI GCTCC 2 cut(s) 490, 1098
Lsp1109I GCAGC 4 cut(s) 279, 726, 983, 1120
MaeI CTAG 4 cut(s) 48, 249, 258, 711
MaeII ACGT 5 cut(s) 376, 635, 764, 1025, 1073
MaeIII GTNAC 4 cut(s) 358, 440, 838, 1021
MalI GATC 6 cut(s) 154, 590, 919, 993, 1108, 1144
MbiI CCGCTC 1 cut(s) 806
MboI GATC 6 cut(s) 152, 588, 917, 991, 1106, 1142
MboII GAAGA 9 cut(s) 212, 473, 527, 670, 708, 994, 1223, 1231, 1234
MflI RGATCY 2 cut(s) 991, 1142
MluCI AATT 5 cut(s) 859, 985, 1162, 1204, 1269
Mly113I GGCGCC 1 cut(s) 833
MlyI GAGTC 5 cut(s) 142, 496, 626, 835, 968
MmeI TCCRAC 1 cut(s) 930
MroXI GAANNNNTTC 1 cut(s) 468
MseI TTAA 3 cut(s) 561, 1103, 1179
MslI CAYNNNNRTG 1 cut(s) 1199
MspA1I CMGCKG 3 cut(s) 270, 1112, 1189
MspCI CTTAAG 1 cut(s) 1102
MspI CCGG 6 cut(s) 348, 473, 737, 836, 915, 1261
MspR9I CCNGG 4 cut(s) 124, 498, 754, 915
MvaI CCWGG 3 cut(s) 124, 498, 754
MvnI CGCG 6 cut(s) 210, 760, 769, 810, 1099, 1189
MwoI GCNNNNNNNGC 3 cut(s) 720, 766, 1118
NarI GGCGCC 1 cut(s) 833
NciI CCSGG 1 cut(s) 915
NcoI CCATGG 2 cut(s) 9, 1194
NdeII GATC 6 cut(s) 152, 588, 917, 991, 1106, 1142
NlaIII CATG 3 cut(s) 13, 1083, 1198
NlaIV GGNNCC 4 cut(s) 352, 492, 834, 993
NmuCI GTSAC 3 cut(s) 358, 838, 1021
NotI GCGGCCGC 1 cut(s) 1116
NruI TCGCGA 2 cut(s) 210, 810
PcsI WCGNNNNNNNCGW 2 cut(s) 214, 884
PdmI GAANNNNTTC 1 cut(s) 468
PfeI GAWTC 3 cut(s) 665, 731, 1255
Pfl23II CGTACG 1 cut(s) 218
PflFI GACNNNGTC 3 cut(s) 415, 781, 844
PflMI CCANNNNNTGG 1 cut(s) 1001
PkrI GCNGC 9 cut(s) 269, 322, 495, 716, 973, 1114, 1117, 1120, 1135
PleI GAGTC 5 cut(s) 141, 496, 625, 835, 967
PluTI GGCGCC 1 cut(s) 836
PmaCI CACGTG 1 cut(s) 636
PmlI CACGTG 1 cut(s) 636
PpsI GAGTC 5 cut(s) 141, 496, 625, 835, 967
Ppu21I YACGTR 1 cut(s) 636
Psp6I CCWGG 3 cut(s) 122, 496, 752
PspCI CACGTG 1 cut(s) 636
PspEI GGTNACC 1 cut(s) 440
PspGI CCWGG 3 cut(s) 122, 496, 752
PspLI CGTACG 1 cut(s) 218
PspN4I GGNNCC 4 cut(s) 352, 492, 834, 993
PspPI GGNCC 2 cut(s) 704, 1191
PstI CTGCAG 1 cut(s) 973
PsuI RGATCY 2 cut(s) 991, 1142
PsyI GACNNNGTC 3 cut(s) 415, 781, 844
PvuII CAGCTG 1 cut(s) 270
RruI TCGCGA 2 cut(s) 210, 810
RsaI GTAC 7 cut(s) 220, 352, 468, 682, 772, 967, 1072
RsaNI GTAC 7 cut(s) 219, 351, 467, 681, 771, 966, 1071
RseI CAYNNNNRTG 1 cut(s) 1199
SacII CCGCGG 1 cut(s) 1190
SalI GTCGAC 1 cut(s) 892
SaqAI TTAA 3 cut(s) 561, 1103, 1179
SatI GCNGC 9 cut(s) 268, 321, 494, 715, 972, 1113, 1116, 1119, 1134
Sau3AI GATC 6 cut(s) 152, 588, 917, 991, 1106, 1142
Sau96I GGNCC 2 cut(s) 704, 1191
ScaI AGTACT 2 cut(s) 468, 967
SchI GAGTC 5 cut(s) 142, 496, 626, 835, 968
ScrFI CCNGG 4 cut(s) 124, 498, 754, 915
SfcI CTRYAG 1 cut(s) 969
SfoI GGCGCC 1 cut(s) 834
Sfr303I CCGCGG 1 cut(s) 1190
SgrAI CRCCGGYG 1 cut(s) 835
SgrBI CCGCGG 1 cut(s) 1190
SinI GGWCC 1 cut(s) 704
SmiMI CAYNNNNRTG 1 cut(s) 1199
SmlI CTYRAG 2 cut(s) 1102, 1247
SmoI CTYRAG 2 cut(s) 1102, 1247
SpeI ACTAGT 2 cut(s) 248, 257
Sse9I AATT 5 cut(s) 859, 985, 1162, 1204, 1269
SspDI GGCGCC 1 cut(s) 832
SspI AATATT 1 cut(s) 875
SspMI CTAG 4 cut(s) 48, 249, 258, 711
StyD4I CCNGG 4 cut(s) 122, 496, 752, 913
StyI CCWWGG 3 cut(s) 9, 384, 1194
TaaI ACNGT 6 cut(s) 95, 218, 331, 358, 781, 901
TaiI ACGT 5 cut(s) 379, 638, 767, 1028, 1076
TaqI TCGA 5 cut(s) 339, 597, 893, 920, 962
TasI AATT 5 cut(s) 859, 985, 1162, 1204, 1269
TatI WGTACW 3 cut(s) 466, 680, 965
TauI GCSGC 5 cut(s) 323, 496, 1115, 1118, 1121
TfiI GAWTC 3 cut(s) 665, 731, 1255
Tru1I TTAA 3 cut(s) 561, 1103, 1179
Tru9I TTAA 3 cut(s) 561, 1103, 1179
TscAI CASTG 2 cut(s) 786, 1002
TseFI GTSAC 3 cut(s) 358, 838, 1021
TseI GCWGC 4 cut(s) 267, 714, 971, 1133
Tsp45I GTSAC 3 cut(s) 358, 838, 1021
TspDTI ATGAA 2 cut(s) 245, 1217
TspGWI ACGGA 6 cut(s) 60, 157, 369, 781, 834, 838
TspRI CASTG 2 cut(s) 786, 1002
Tth111I GACNNNGTC 3 cut(s) 415, 781, 844
Van91I CCANNNNNTGG 1 cut(s) 1001
Vha464I CTTAAG 1 cut(s) 1102
VpaK11BI GGWCC 1 cut(s) 704
XapI RAATTY 2 cut(s) 985, 1204
XmiI GTMKAC 1 cut(s) 893
XmnI GAANNNNTTC 1 cut(s) 468
XspI CTAG 4 cut(s) 48, 249, 258, 711
ZrmI AGTACT 2 cut(s) 468, 967
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.