Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0004123

Physical Location & Seq

Genomic Coordinates Forward (+)

386699 .. 391727

Gene Structure 5029 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1006200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGCCACGTGGTGGTGGTAACTACTACAACTTCACGAAGATCAGGGACGCCATTGATTCCGTCGGCGCCAAGGTCAACGTAATCGGCGTCGTCCTCGAGTGCGGCTTCCCTCGCCAAACCAGAGGCACCGATTGGTTCGTTTCGGTGCGTATAATCGATGAGACGCATCAGGATCCCGGGTTGTCAGTTAATATATTTACAGATAGGAATGAATGTCCTCGCATTTTATCTGTTGGAGACATAATTCAGTTCCAACGCGTCACGATTAATCATCATGTAGGTAAAGTAAATGCTGTTTTTTGCAAGAAGTTCTCTACCTTTGCTATTTATTACAGAAGTGACAATACAAATTTAAGTCCTTATCATGCTTGCAAAACATTTCGCGAGAGAGACCATGACAAGAACTTTGTGATAGACTTGAGAAGTTGGTTGAAGAATTTCCATTTTCACGAAGGTGCAAATTATTTCTCATTTGTCAGAGAAATGAAAGGAGGTGAAGATTTTAATTTGGTTTGTAAAATAATCCATATCCATGAGGGTGCTGGAAATGAATGGATGGCCTTTGTTTGGGATGGAACCGATGCTCCACCAGCAGATATTCTTCAAAAGCTAGAAGATGAAATGAAGCACCCACTTCCCCTACATCTGGAACCATTTCCTTTGCCAAGTGATACCTTATGCAGCAGCTTTCCTGCTGTTGGAACTGTCTTAAGAGTGATATCTCAGGACCTTGAGAATGACAACCTTCGCCTGCTAAAAACTGGGGAGTGGGTGAAGCTTGTAAATTTGCTATGTGAAGTGCATGCAGGAATATGGCGTTGTGTTCTGACACCCTTTACAAAGCTTCGATATACACCAAAAGAGGACCGTCTCAAACTCGAGCGGAAAAGGTTATTTAACGAACAATTAGCCCAAAGTCCAGAAAGTTTAATGCAGATGCCATTTGGGGGCTTTCCCTCGCCTCAAGTCACAGAGGTTGATGATAGTGACGACGACCATGCAATATTTCTTACCTTAATGGATGTTGTTGCAAGTTCAGAGGTCCCAGCTAGTTTCAAGTGTGTAGTCCCAGCTAGTTTCAAGTGTGTAGTTCGAGTCATAGCAGCTTTCCCATGGCAGGCTGCGGACTTCCTCTTTCCTGCTGGGATTGACAGAATTAGGCTGACTCTGGAGGACTCGACCGCTAGAATTCATGCTTTTTTGTATGCAGAAGATGGGGTGAAATTTTTCGGTGGCCAGTCCTCTGTCGAGGCACTGGAGATCAAACGCAATGCCTTGTTAGGAGTGAGAGTAAATACTGATGGGGCGCAAGACGACACTCGTAGAAATCCTCCTTGGGTACAAGTTCGGCTAAAATCTGAAACTAACCAGCAAGGAAATCTGCACTACCGGGTTTTCGGCACCAAAGTGGTGGCGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003723 GO:0004857 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006278 GO:0006725 GO:0006807 GO:0006996 GO:0007004 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010521 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010638 GO:0010833 GO:0016043 GO:0016233 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030234 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032200 GO:0032204 GO:0032206 GO:0032210 GO:0032212 GO:0032991 GO:0032993 GO:0033043 GO:0033044 GO:0034641 GO:0034645 GO:0034654 GO:0042162 GO:0042592 GO:0043047 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044092 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045934 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051052 GO:0051053 GO:0051054 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051276 GO:0051338 GO:0051348 GO:0051972 GO:0051974 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0090304 GO:0097159 GO:0098505 GO:0098687 GO:0098772 GO:0098847 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1904356 GO:1904358 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2000573 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

POT1 POT1PC

Protein Analysis

474

Amino Acids

53.61

Weight (kDa)

6.32

Isoelectric Point (pI)

39.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POT1	PF02765	11 - 144	2.9e-27	Telomeric single stranded DNA binding POT1/CDC13
OB_POT1A	PF25507	324 - 457	1.4e-42	POT1A-like, OB fold domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004123)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04395 AT2G04395 AT2G04395 AT2G04395 AT2G04395 AT2G05210 AT2G05210 AT2G05210 AT5G06310
fragaria_vesca	FvH4_6g53500 FvH4_6g53500 FvH4_6g53500
malus_domestica	MD06G1227400.v1.1 MD13G1006200.v1.1
prunus_persica	Prupe.5G233900_v2.0.a1 Prupe.5G233900_v2.0.a1 Prupe.5G233900_v2.0.a1 Prupe.5G233900_v2.0.a1 Prupe.5G233900_v2.0.a1
pyrus_communis	pycom06g20390 pycom13g00510
rosa_chinensis	RchiOBHm_Chr7g0178331
rosa_laevigata	RLG00000005455
rosa_multiflora	Rmu_ssc0000283.1_g000002
rosa_roxburghii	Rroxscaffold_3G00275010
rosa_rugosa	Rorug06G0416000 Rorug06G0416100 Rorug06G0416100
rosa_samantha	Rh7AG014800 Rh7BG014300 Rh7CG014300 Rh7DG014600
rosa_wichuraiana	Rw7G001170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	65, 125, 1400
AccB7I	CCANNNNNTGG	1 cut(s)	11
AccBSI	CCGCTC	1 cut(s)	883
AccII	CGCG	2 cut(s)	258, 384
AciI	CCGC	5 cut(s)	102, 883, 1124, 1182, 1415
AclWI	GGATC	2 cut(s)	167, 180
AcoI	YGGCCR	1 cut(s)	1234
AcsI	RAATTY	5 cut(s)	349, 436, 784, 1188, 1223
AcvI	CACGTG	1 cut(s)	8
AcyI	GRCGYC	3 cut(s)	48, 66, 87
AdeI	CACNNNGTG	1 cut(s)	11
AfaI	GTAC	1 cut(s)	1341
AfiI	CCNNNNNNNGG	6 cut(s)	11, 567, 646, 698, 947, 1117
AflII	CTTAAG	1 cut(s)	709
AflIII	ACRYGT	1 cut(s)	256
AgsI	TTSAA	4 cut(s)	433, 605, 1057, 1081
AjuI	GAANNNNNNNTTGG	2 cut(s)	1318, 1350
AleI	CACNNNNGTG	2 cut(s)	453, 1406
AloI	GAACNNNNNNTCC	2 cut(s)	568, 600
AluBI	AGCT	7 cut(s)	610, 687, 778, 844, 1049, 1073, 1106
AluI	AGCT	7 cut(s)	610, 687, 778, 844, 1049, 1073, 1106
Alw26I	GTCTC	4 cut(s)	155, 231, 384, 875
AlwI	GGATC	2 cut(s)	167, 180
Ama87I	CYCGRG	3 cut(s)	95, 176, 878
AoxI	GGCC	3 cut(s)	558, 1234, 1416
ApeKI	GCWGC	4 cut(s)	681, 684, 1103, 1121
ApoI	RAATTY	5 cut(s)	349, 436, 784, 1188, 1223
ArsI	GACNNNNNNTTYG	2 cut(s)	389, 421
AseI	ATTAAT	1 cut(s)	267
Asp700I	GAANNNNTTC	3 cut(s)	437, 654, 1226
AspLEI	GCGC	2 cut(s)	68, 1309
AspS9I	GGNCC	3 cut(s)	727, 865, 1042
AsuC2I	CCSGG	3 cut(s)	177, 178, 1391
AsuHPI	GGTGA	3 cut(s)	506, 784, 1231
AvaI	CYCGRG	3 cut(s)	95, 176, 878
AvaII	GGWCC	3 cut(s)	727, 865, 1042
BalI	TGGCCA	1 cut(s)	1236
BamHI	GGATCC	1 cut(s)	172
BanI	GGYRCC	3 cut(s)	65, 125, 1400
BarI	GAAGNNNNNNTAC	2 cut(s)	328, 360
BbrPI	CACGTG	1 cut(s)	8
BbvI	GCAGC	4 cut(s)	693, 696, 1108, 1115
BccI	CCATC	4 cut(s)	550, 566, 1208, 1295
BcgI	CGANNNNNNTGC	2 cut(s)	980, 1014
BcnI	CCSGG	3 cut(s)	177, 178, 1391
BcoDI	GTCTC	4 cut(s)	155, 231, 384, 875
BfaI	CTAG	4 cut(s)	611, 1050, 1074, 1185
BfoI	RGCGCY	1 cut(s)	69
BfrI	CTTAAG	1 cut(s)	709
BisI	GCNGC	6 cut(s)	103, 682, 685, 1104, 1122, 1416
BlsI	GCNGC	6 cut(s)	104, 683, 686, 1105, 1123, 1417
Bme1390I	CCNGG	3 cut(s)	177, 178, 1391
Bme18I	GGWCC	3 cut(s)	727, 865, 1042
BmeT110I	CYCGRG	3 cut(s)	95, 176, 878
BmgT120I	GGNCC	3 cut(s)	727, 865, 1042
BmiI	GGNNCC	7 cut(s)	67, 127, 174, 577, 651, 1044, 1402
BmrFI	CCNGG	3 cut(s)	177, 178, 1391
BmrI	ACTGGG	1 cut(s)	771
BmsI	GCATC	3 cut(s)	175, 571, 927
BmuI	ACTGGG	1 cut(s)	771
BpmI	CTGGAG	2 cut(s)	1190, 1277
BpuEI	CTTGAG	3 cut(s)	439, 752, 948
BpuMI	CCSGG	3 cut(s)	177, 178, 1391
Bsa29I	ATCGAT	1 cut(s)	156
BsaAI	YACGTR	1 cut(s)	8
BsaHI	GRCGYC	3 cut(s)	48, 66, 87
BsaI	GGTCTC	1 cut(s)	384
BsaJI	CCNNGG	4 cut(s)	69, 176, 1112, 1334
BsaXI	ACNNNNNCTCC	4 cut(s)	568, 598, 1275, 1305
Bsc4I	CCNNNNNNNGG	6 cut(s)	11, 567, 646, 698, 947, 1117
Bse1I	ACTGG	3 cut(s)	766, 1237, 1260
Bse3DI	GCAATG	1 cut(s)	1276
BseCI	ATCGAT	1 cut(s)	156
BseDI	CCNNGG	4 cut(s)	69, 176, 1112, 1334
BseGI	GGATG	3 cut(s)	561, 577, 1027
BseLI	CCNNNNNNNGG	6 cut(s)	11, 567, 646, 698, 947, 1117
BseMI	GCAATG	1 cut(s)	1276
BseMII	CTCAG	1 cut(s)	737
BseNI	ACTGG	3 cut(s)	766, 1237, 1260
BseXI	GCAGC	4 cut(s)	693, 696, 1108, 1115
BseYI	CCCAGC	3 cut(s)	1045, 1069, 1142
BsgI	GTGCAG	1 cut(s)	1367
Bsh1236I	CGCG	2 cut(s)	258, 384
Bsh1285I	CGRYCG	1 cut(s)	1182
BshFI	GGCC	3 cut(s)	560, 1236, 1418
BshNI	GGYRCC	3 cut(s)	65, 125, 1400
BshVI	ATCGAT	1 cut(s)	156
BsiEI	CGRYCG	1 cut(s)	1182
BsiHKCI	CYCGRG	3 cut(s)	95, 176, 878
BsiSI	CCGG	2 cut(s)	177, 1390
BslFI	GGGAC	3 cut(s)	59, 1028, 1052
BslI	CCNNNNNNNGG	6 cut(s)	11, 567, 646, 698, 947, 1117
BsmAI	GTCTC	4 cut(s)	155, 231, 384, 875
BsmBI	CGTCTC	2 cut(s)	155, 875
BsmFI	GGGAC	3 cut(s)	59, 1028, 1052
BsnI	GGCC	3 cut(s)	560, 1236, 1418
Bso31I	GGTCTC	1 cut(s)	384
BsoBI	CYCGRG	3 cut(s)	95, 176, 878
Bsp143I	GATC	3 cut(s)	39, 172, 1260
Bsp19I	CCATGG	1 cut(s)	1112
Bsp68I	TCGCGA	1 cut(s)	384
BspACI	CCGC	5 cut(s)	102, 883, 1124, 1182, 1415
BspANI	GGCC	3 cut(s)	560, 1236, 1418
BspCNI	CTCAG	1 cut(s)	736
BspDI	ATCGAT	1 cut(s)	156
BspFNI	CGCG	2 cut(s)	258, 384
BspLI	GGNNCC	7 cut(s)	67, 127, 174, 577, 651, 1044, 1402
BspPI	GGATC	2 cut(s)	167, 180
BspT107I	GGYRCC	3 cut(s)	65, 125, 1400
BspTI	CTTAAG	1 cut(s)	709
BspTNI	GGTCTC	1 cut(s)	384
BsrBI	CCGCTC	1 cut(s)	883
BsrDI	GCAATG	1 cut(s)	1276
BsrI	ACTGG	3 cut(s)	766, 1237, 1260
BssECI	CCNNGG	4 cut(s)	69, 176, 1112, 1334
BssMI	GATC	3 cut(s)	39, 172, 1260
BssNI	GRCGYC	3 cut(s)	48, 66, 87
BssT1I	CCWWGG	3 cut(s)	69, 1112, 1334
Bst4CI	ACNGT	2 cut(s)	706, 869
BstACI	GRCGYC	3 cut(s)	48, 66, 87
BstAFI	CTTAAG	1 cut(s)	709
BstBAI	YACGTR	1 cut(s)	8
BstC8I	GCNNGC	4 cut(s)	370, 752, 804, 1119
BstDEI	CTNAG	1 cut(s)	723
BstDSI	CCRYGG	1 cut(s)	1112
BstF5I	GGATG	3 cut(s)	561, 577, 1027
BstFNI	CGCG	2 cut(s)	258, 384
BstH2I	RGCGCY	1 cut(s)	69
BstHHI	GCGC	2 cut(s)	68, 1309
BstKTI	GATC	3 cut(s)	42, 175, 1263
BstMAI	GTCTC	4 cut(s)	155, 231, 384, 875
BstMBI	GATC	3 cut(s)	39, 172, 1260
BstMCI	CGRYCG	1 cut(s)	1182
BstMWI	GCNNNNNNNGC	2 cut(s)	111, 590
BstNSI	RCATGY	1 cut(s)	806
BstSCI	CCNGG	3 cut(s)	175, 176, 1389
BstUI	CGCG	2 cut(s)	258, 384
BstV1I	GCAGC	4 cut(s)	693, 696, 1108, 1115
BstX2I	RGATCY	1 cut(s)	172
BstXI	CCANNNNNNTGG	1 cut(s)	1411
BstYI	RGATCY	1 cut(s)	172
Bsu15I	ATCGAT	1 cut(s)	156
BsuRI	GGCC	3 cut(s)	560, 1236, 1418
BsuTUI	ATCGAT	1 cut(s)	156
BtgI	CCRYGG	1 cut(s)	1112
BtsCI	GGATG	3 cut(s)	561, 577, 1027
BtsIMutI	CAGTG	1 cut(s)	1253
BtuMI	TCGCGA	1 cut(s)	384
Cac8I	GCNNGC	4 cut(s)	370, 752, 804, 1119
CfoI	GCGC	2 cut(s)	68, 1309
Cfr13I	GGNCC	3 cut(s)	727, 865, 1042
Cfr9I	CCCGGG	1 cut(s)	176
ClaI	ATCGAT	1 cut(s)	156
CseI	GACGC	4 cut(s)	56, 76, 172, 247
Csp6I	GTAC	1 cut(s)	1340
CviAII	CATG	8 cut(s)	275, 365, 395, 533, 803, 998, 1113, 1193
CviQI	GTAC	1 cut(s)	1340
DdeI	CTNAG	1 cut(s)	723
DinI	GGCGCC	1 cut(s)	67
DpnI	GATC	3 cut(s)	41, 174, 1262
DpnII	GATC	3 cut(s)	39, 172, 1260
DraIII	CACNNNGTG	1 cut(s)	11
EaeI	YGGCCR	1 cut(s)	1234
Eco130I	CCWWGG	3 cut(s)	69, 1112, 1334
Eco31I	GGTCTC	1 cut(s)	384
Eco32I	GATATC	1 cut(s)	720
Eco47I	GGWCC	3 cut(s)	727, 865, 1042
Eco72I	CACGTG	1 cut(s)	8
Eco88I	CYCGRG	3 cut(s)	95, 176, 878
EcoO109I	RGGNCCY	2 cut(s)	727, 1042
EcoRI	GAATTC	1 cut(s)	1188
EcoRV	GATATC	1 cut(s)	720
EcoT14I	CCWWGG	3 cut(s)	69, 1112, 1334
EgeI	GGCGCC	1 cut(s)	67
EheI	GGCGCC	1 cut(s)	67
ErhI	CCWWGG	3 cut(s)	69, 1112, 1334
Esp3I	CGTCTC	2 cut(s)	155, 875
FaeI	CATG	8 cut(s)	278, 368, 398, 536, 806, 1001, 1116, 1196
FaqI	GGGAC	3 cut(s)	59, 1028, 1052
FatI	CATG	8 cut(s)	274, 364, 394, 532, 802, 997, 1112, 1192
Fnu4HI	GCNGC	6 cut(s)	103, 682, 685, 1104, 1122, 1416
FokI	GGATG	3 cut(s)	568, 584, 1034
Fsp4HI	GCNGC	6 cut(s)	103, 682, 685, 1104, 1122, 1416
FspBI	CTAG	4 cut(s)	611, 1050, 1074, 1185
GlaI	GCGC	2 cut(s)	67, 1308
GluI	GCNGC	6 cut(s)	103, 682, 685, 1104, 1122, 1416
GsaI	CCCAGC	3 cut(s)	1049, 1073, 1146
GsuI	CTGGAG	2 cut(s)	1190, 1277
HaeII	RGCGCY	1 cut(s)	69
HaeIII	GGCC	3 cut(s)	560, 1236, 1418
HapII	CCGG	2 cut(s)	177, 1390
HgaI	GACGC	4 cut(s)	56, 76, 172, 247
HhaI	GCGC	2 cut(s)	68, 1309
Hin1I	GRCGYC	3 cut(s)	48, 66, 87
Hin1II	CATG	8 cut(s)	278, 368, 398, 536, 806, 1001, 1116, 1196
Hin6I	GCGC	2 cut(s)	66, 1307
HinP1I	GCGC	2 cut(s)	66, 1307
HincII	GTYRAC	1 cut(s)	76
HindII	GTYRAC	1 cut(s)	76
HindIII	AAGCTT	2 cut(s)	776, 842
HinfI	GANTC	4 cut(s)	56, 1095, 1165, 1175
HpaII	CCGG	2 cut(s)	177, 1390
HphI	GGTGA	3 cut(s)	506, 784, 1231
Hpy166II	GTNNAC	1 cut(s)	76
Hpy188I	TCNGA	4 cut(s)	479, 828, 1039, 1360
Hpy188III	TCNNGA	9 cut(s)	34, 170, 262, 383, 449, 647, 725, 920, 1169
Hpy8I	GTNNAC	1 cut(s)	76
Hpy99I	CGWCG	3 cut(s)	65, 92, 995
HpyAV	CCTTC	2 cut(s)	446, 755
HpyCH4III	ACNGT	2 cut(s)	706, 869
HpyCH4IV	ACGT	2 cut(s)	7, 78
HpyF10VI	GCNNNNNNNGC	2 cut(s)	111, 590
HpyF3I	CTNAG	1 cut(s)	723
HpySE526I	ACGT	2 cut(s)	7, 78
Hsp92I	GRCGYC	3 cut(s)	48, 66, 87
Hsp92II	CATG	8 cut(s)	278, 368, 398, 536, 806, 1001, 1116, 1196
HspAI	GCGC	2 cut(s)	66, 1307
KasI	GGCGCC	1 cut(s)	65
Kzo9I	GATC	3 cut(s)	39, 172, 1260
LmnI	GCTCC	1 cut(s)	589
Lsp1109I	GCAGC	4 cut(s)	693, 696, 1108, 1115
LweI	GCATC	3 cut(s)	175, 571, 927
MaeI	CTAG	4 cut(s)	611, 1050, 1074, 1185
MaeII	ACGT	2 cut(s)	7, 78
MaeIII	GTNAC	5 cut(s)	17, 259, 338, 967, 986
MalI	GATC	3 cut(s)	41, 174, 1262
MbiI	CCGCTC	1 cut(s)	883
MboI	GATC	3 cut(s)	39, 172, 1260
MboII	GAAGA	6 cut(s)	49, 445, 509, 593, 626, 1223
MflI	RGATCY	1 cut(s)	172
MlsI	TGGCCA	1 cut(s)	1236
MluI	ACGCGT	1 cut(s)	256
MluNI	TGGCCA	1 cut(s)	1236
Mly113I	GGCGCC	1 cut(s)	66
MlyI	GAGTC	3 cut(s)	1104, 1159, 1169
MmeI	TCCRAC	3 cut(s)	214, 277, 679
Mox20I	TGGCCA	1 cut(s)	1236
MroXI	GAANNNNTTC	3 cut(s)	437, 654, 1226
MscI	TGGCCA	1 cut(s)	1236
MseI	TTAA	8 cut(s)	189, 267, 353, 504, 710, 897, 929, 1016
MslI	CAYNNNNRTG	4 cut(s)	453, 531, 537, 1406
Msp20I	TGGCCA	1 cut(s)	1236
MspCI	CTTAAG	1 cut(s)	709
MspI	CCGG	2 cut(s)	177, 1390
MspR9I	CCNGG	3 cut(s)	177, 178, 1391
MvnI	CGCG	2 cut(s)	258, 384
MwoI	GCNNNNNNNGC	2 cut(s)	111, 590
NarI	GGCGCC	1 cut(s)	66
NciI	CCSGG	3 cut(s)	177, 178, 1391
NcoI	CCATGG	1 cut(s)	1112
NdeII	GATC	3 cut(s)	39, 172, 1260
NlaIII	CATG	8 cut(s)	278, 368, 398, 536, 806, 1001, 1116, 1196
NlaIV	GGNNCC	7 cut(s)	67, 127, 174, 577, 651, 1044, 1402
NmuCI	GTSAC	4 cut(s)	259, 338, 967, 986
NruI	TCGCGA	1 cut(s)	384
NspI	RCATGY	1 cut(s)	806
OliI	CACNNNNGTG	2 cut(s)	453, 1406
PaeI	GCATGC	1 cut(s)	806
PaeR7I	CTCGAG	2 cut(s)	95, 878
PcsI	WCGNNNNNNNCGW	1 cut(s)	84
PdmI	GAANNNNTTC	3 cut(s)	437, 654, 1226
PfeI	GAWTC	1 cut(s)	56
PflMI	CCANNNNNTGG	1 cut(s)	11
PkrI	GCNGC	6 cut(s)	104, 683, 686, 1105, 1123, 1417
PleI	GAGTC	3 cut(s)	1103, 1159, 1169
PluTI	GGCGCC	1 cut(s)	69
PmaCI	CACGTG	1 cut(s)	8
PmlI	CACGTG	1 cut(s)	8
PpsI	GAGTC	3 cut(s)	1103, 1159, 1169
Ppu21I	YACGTR	1 cut(s)	8
PpuMI	RGGWCCY	2 cut(s)	727, 1042
PshBI	ATTAAT	1 cut(s)	267
Psp5II	RGGWCCY	2 cut(s)	727, 1042
PspCI	CACGTG	1 cut(s)	8
PspFI	CCCAGC	3 cut(s)	1045, 1069, 1142
PspN4I	GGNNCC	7 cut(s)	67, 127, 174, 577, 651, 1044, 1402
PspPI	GGNCC	3 cut(s)	727, 865, 1042
PspPPI	RGGWCCY	2 cut(s)	727, 1042
PspXI	VCTCGAGB	2 cut(s)	95, 878
PsuI	RGATCY	1 cut(s)	172
RruI	TCGCGA	1 cut(s)	384
RsaI	GTAC	1 cut(s)	1341
RsaNI	GTAC	1 cut(s)	1340
RseI	CAYNNNNRTG	4 cut(s)	453, 531, 537, 1406
SaqAI	TTAA	8 cut(s)	189, 267, 353, 504, 710, 897, 929, 1016
SatI	GCNGC	6 cut(s)	103, 682, 685, 1104, 1122, 1416
Sau3AI	GATC	3 cut(s)	39, 172, 1260
Sau96I	GGNCC	3 cut(s)	727, 865, 1042
SchI	GAGTC	3 cut(s)	1104, 1159, 1169
ScrFI	CCNGG	3 cut(s)	177, 178, 1391
SfaNI	GCATC	3 cut(s)	175, 571, 927
SfoI	GGCGCC	1 cut(s)	67
Sfr274I	CTCGAG	2 cut(s)	95, 878
SinI	GGWCC	3 cut(s)	727, 865, 1042
SlaI	CTCGAG	2 cut(s)	95, 878
SmaI	CCCGGG	1 cut(s)	178
SmiMI	CAYNNNNRTG	4 cut(s)	453, 531, 537, 1406
SmlI	CTYRAG	6 cut(s)	95, 418, 709, 731, 878, 963
SmoI	CTYRAG	6 cut(s)	95, 418, 709, 731, 878, 963
SphI	GCATGC	1 cut(s)	806
SsiI	CCGC	5 cut(s)	102, 883, 1124, 1182, 1415
SspDI	GGCGCC	1 cut(s)	65
SspI	AATATT	1 cut(s)	1005
SspMI	CTAG	4 cut(s)	611, 1050, 1074, 1185
StyD4I	CCNGG	3 cut(s)	175, 176, 1389
StyI	CCWWGG	3 cut(s)	69, 1112, 1334
TaaI	ACNGT	2 cut(s)	706, 869
TaiI	ACGT	2 cut(s)	10, 81
TaqI	TCGA	7 cut(s)	96, 156, 847, 879, 1093, 1178, 1248
TauI	GCSGC	2 cut(s)	105, 1418
TfiI	GAWTC	1 cut(s)	56
Tru1I	TTAA	8 cut(s)	189, 267, 353, 504, 710, 897, 929, 1016
Tru9I	TTAA	8 cut(s)	189, 267, 353, 504, 710, 897, 929, 1016
TscAI	CASTG	1 cut(s)	1260
TseFI	GTSAC	4 cut(s)	259, 338, 967, 986
TseI	GCWGC	4 cut(s)	681, 684, 1103, 1121
Tsp45I	GTSAC	4 cut(s)	259, 338, 967, 986
TspDTI	ATGAA	6 cut(s)	225, 500, 564, 633, 638, 1181
TspGWI	ACGGA	1 cut(s)	49
TspMI	CCCGGG	1 cut(s)	176
TspRI	CASTG	1 cut(s)	1260
Van91I	CCANNNNNTGG	1 cut(s)	11
Vha464I	CTTAAG	1 cut(s)	709
VpaK11BI	GGWCC	3 cut(s)	727, 865, 1042
VspI	ATTAAT	1 cut(s)	267
XapI	RAATTY	5 cut(s)	349, 436, 784, 1188, 1223
XceI	RCATGY	1 cut(s)	806
XcmI	CCANNNNNNNNNTGG	1 cut(s)	539
XhoI	CTCGAG	2 cut(s)	95, 878
XmaI	CCCGGG	1 cut(s)	176
XmnI	GAANNNNTTC	3 cut(s)	437, 654, 1226
XspI	CTAG	4 cut(s)	611, 1050, 1074, 1185

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.