RLG00000005455

Protection of telomeres protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0004123
Physical Location & Seq
Forward (+)
67737257 .. 67750121
12865 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005455

Sequence Viewer

Length: 3732 bp
ATGTCGTCAATGCGCGACCTTTACCACTTCACCAAGATCAGAGCCGCCCGGAATGTTAAACGCGGCAAAGTTAACATCATCGGCGTCGTTCTCGAGCACGGATTTCCCAGAAAGTCCAAAGGCACCGATTGGTATTACTTCGTGCGGATAATTGATGAGACTTATCATGATATTGGGTTACCCGTTCATATATTCTTTGAAACTATGGATAGAAGTCCTCGTGTTTTGTCTCCTGGAGACATAATTCAATTTCAAAGTGTTACGGTGAAAGTTTTTGGAGATGAAGTGTCTGCAGTTTATAACAAGCAGTACTCTAGCTTTGCCCTGTATGACGGAAGAGATGGTAGTGTTCCTTATCAGACTTCTCAAAGATTCCGCGAAAGGGACCTAGACAAGAGATTTGTCACAGACTTGAGAAGATGGTTTCGGGATTTCCCTATTGATGAAGGCCCAAGTAATTTCTCATTCGCAAGACAATTGACAGAGGGAGAGCATTTTAATTTGTTTTGTAAAGTACTTTATGTCTATGAAGGAGCTGGAAGTCAGTGGACAGCCTTTGTTTGGGATGGAAGTGATGCTCCTCCAGCCATAATTCACAAAAAGCTCTCAGAGGAGATGCATCAGCCATTAGCTCTACATTTGGAATCTTTTTCCTTAGCAAGGGATATTGTATGTAGCTTTCCAACTTTAGGAACCGTGTTAAGGGTGATATCTCAAGATATTGAGCCAGACTTCCTCCCTTTGTTGAGAGCTGGCAACTGGGTAAAACTTACAAATTTGATGTGTGAATTGCATGATGGACTATGGCGTGTTGTGTTGACTCAGTACTCTAGGATTCATTATGCATCAAATGGGGATCAATTCAAACCTCAGCCACAAAGGTTATATGATGAGCGGTTGTTACGAAATCCTAGAAATTTGAGACGAATGCCACAATGGAGCTTACCTTGGCCTTCTCGAATTACAGAGGTTGATATTGATGATGATTGTGAATTTCGTACCTTAATGGATGTTGTCACGAGTACGGAGGTGATGGTTGGTTATAAGTGTGTTGTTCGTGTTGTATCGGTTTTGCCATGCCGGGCAATGGACTATCACTACCCTAATGGGGTCCTTAGAATTAGACTAACGTTAGAAGACCCAACTACCAGAATTCATGCCTTTTTGTATGCCGAAGATGGGTTGAAGTTTTTCAATGGACCTTCATCTGATGAGGTATTGAGTACAAAGCGAAATGCACTGGTAGGAGCTTCTGCAAATATTGATGGAGAGGAAGAAGAGGATACTCCTCGAAACCCACCTTGGGTGCAAGGGATTGTAGACGAAGTGGTCAAAATCATAGAAGGCAACAAGAAAGAGATGGCAACAAGAGTGAACGGTGCAGACGGTCTCTACAGCTCTAGCAAAAACTCTTCTTTTCAGAGAAATGCTATAGATGCTGCCAAGGAACTGATCAAAGAGGCAGTTATCGACAAGCTTGACATCGAAAGCTTCTCATCCTCAAACGCCTTTCGAGTTACAGATCTAGGCTGTGCAGTGGGGCCTAACACGATCGTAGCTGTGCAAAACATACTTGAAGCTTTGGAGGAAAAGTACCGAACCCGAGGGCGCAATTCTGAGGTCCCCGAGTTTCAAGTCTTTTTCAGTGATCAAGCTGGAAATGATTTCAATCAGCTCTTCCAATCCCTCCCGCCAGACAGGAACTACTTCGCAATGGGCGTACCGGGATCTTTTTACTCTCGCTTGTTTCCCAAGGCACATCTTCACTTTGTACACTCTTCATTTTCTCTGCAATGTCTCTCTAAAGTGCCTGAGGTAGCAGGATTCATCCAAGTTGTCGAGGCATATTCAGCTCAATATGCCAAGGACATGGAGTGCTTTCTAAATGCTCGAGCACGAGAGATCGTTGGTGGAGGGTTGATGGCGTTTGTTGTTCCCGGCCGCCCTGATGAAACCCCTCATGCACAAAACTATTACAACATGGGACTAGACCTATTTGGTTCCTGCCTCATGGACATGGCCAAGAAGGGTATCATTGCCGATGACAAAGTGGACTCCTTCAATCTACCGATATATAATGCTTCTCTCCAAGAAGTGGAAGCCATTGTGAAAGAGAACGGATGTTTCAGCATAGAGAGAATGGAAAACTTGCCTCAAGAAAAGATGCAGCCCAATGTTTTTCTCTCAACTGCGAGAGGTGGAATGGAGAATTTTCTTCGGGGGCATTTTGGAGAAGAGATTCTAGATGAGTTCTTTGATACATTAGGCAAGAAATATGAAGACTCCACCTCCGTCTATGAATCAGTGAAAGCTTGGCCCTTTTGTGCCAGCGACGGCGCCATGCCTCGCCGGCATGAGGTAGGAGCAGCGCCAGACGGGCCTCTAGTTCTTTTGCTCTCTGCTATGAAAAGCTTGGCTATTTGGGGGATGGCTTCGGGTCGACGTGATTTGGGTGGGTCTGTCCTTAGTTTCCGTGGTGGTTATGTCTGGTGGAGCGTCGGTGATCGCCATAATGGTGGTGGGATACATTGGAGATGGTGGAGGTGGATGACTCTTGGCTTATGCAGGCTGCGCAGAGGTGAAGGTGGTGTTAGGATGTTGATTGACGAGATATGTGGCAATCTTGACTGGGTTCATGATGCGTGGTGGTGGTTGGTGGCTCTGTGGGTGGTTAAGTCAATTAGGGTAGGGGCTGTGCAGTGGGTGGGTGGCCGTCATTGGGCGGGTGGAGGTGGCGATGCCAGAGCGAAGGGAGTTTTGGATGTTGCCAAAGAACTTATAAGAAAGGCAATTGCAGAAAAGCTTGACATAGACATCTTGTCATCTTCCACCTCCTTCAAAATTGCAGACTTGGGTTGCTCTGTTGGACCTAATACATTTTTCGCAGTTGAAAACATAGTTGAAGCTGTGGAAGCCAAGTTTCAAAGCCTAGGGCTGAATTCTCAAGTCCCTGAGTTTCATGTTTTCTTCAGTGATCATACCTCAAATGACTTTAACATGCTCTTCAAAACCCGTCCTCAGAACAAGCAATACTATGCAGCTGGTGTGCCAGGTTCTTTCCATGGCCGGTTATTTCCTAATGCTTCCATTCACATTGTTCACTCTTCTTATGCCATTCAATTTCTTTCAAGAGTTCCGAAAGCAGTGATGGATAGAAACAGTCCTGCTTGGAATAAAGGACACATCTGGTACTCAAACTCCACTAATGAAGTAGTGCGGGCTTACAAAGCTCAATATGCAGAGGACATGGAATGCTTCCTGCATGCTAGGGTGCAAGAAACTGTGCATGGAGGACTGATACTACTTACTTTTCCAGGCAGGCCCGATGGCTTTCTTTATTCTCATTCTCTTGTGGGCTTTGAACTTCTTGGATCTTGCCTCATGGACTTGGTTAGAAAGGGAGTTGTTAGCGAAGAGAAGGTGGATTCATTTAACGTGCCTGTGTATTCCATGTCACCTCAAGAACTTGAAGTTGCTGTCAAACGAAATGGATGCTTTAGCATAGACATAATGGCAGAGTTACCTCGTCCCTTGGTACACGACAATCTTTCAATATCCGAGATGATTGCTTCTCACATAAGAGCTGCTATGGGGGGGATGATAAAGAAGCAATTTGGAGAAGAAATCTTAGATGAGCTTTTCGACTTGTACCGACAAAAATGTACGCAATCAATAATTAACACACTGCTTGGAGACACCTTTCTTGTTGTTCTTAGACGTAAAGCAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003723 GO:0004857 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006278 GO:0006725 GO:0006807 GO:0006996 GO:0007004 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010521 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010638 GO:0010833 GO:0016043 GO:0016233 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030234 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032200 GO:0032204 GO:0032206 GO:0032210 GO:0032212 GO:0032991 GO:0032993 GO:0033043 GO:0033044 GO:0034641 GO:0034645 GO:0034654 GO:0042162 GO:0042592 GO:0043047 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044092 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045934 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051052 GO:0051053 GO:0051054 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051276 GO:0051338 GO:0051348 GO:0051972 GO:0051974 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0090304 GO:0097159 GO:0098505 GO:0098687 GO:0098772 GO:0098847 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1904356 GO:1904358 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2000573 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
POT1 POT1PC

Protein Analysis

1244

Amino Acids

140.47

Weight (kDa)

6.08

Isoelectric Point (pI)

44.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
POT1 PF02765 10 - 142 1.8e-22 Telomeric single stranded DNA binding POT1/CDC13
OB_POT1A PF25507 317 - 439 1.9e-42 POT1A-like, OB fold domain
Methyltransf_7 PF03492 492 - 764 8e-83 SAM dependent carboxyl methyltransferase
Methyltransf_7 PF03492 935 - 1226 4.4e-99 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 300, 1044, 2780
AasI GACNNNNNNGTC 1 cut(s) 1328
Acc16I TGCGCA 1 cut(s) 2573
AccB1I GGYRCC 2 cut(s) 122, 2336
AccB7I CCANNNNNTGG 1 cut(s) 2095
AccBSI CCGCTC 1 cut(s) 895
AccI GTMKAC 2 cut(s) 1320, 2440
AccII CGCG 3 cut(s) 15, 63, 378
AciI CCGC 9 cut(s) 45, 63, 145, 376, 895, 1691, 1942, 2723, 3217
AclI AACGTT 1 cut(s) 1130
AclWI GGATC 3 cut(s) 864, 1735, 3379
AcoI YGGCCR 4 cut(s) 1939, 2019, 2710, 3064
AcsI RAATTY 6 cut(s) 775, 916, 992, 1152, 2209, 2938
AcuI CTGAAG 1 cut(s) 2953
AcyI GRCGYC 2 cut(s) 84, 2337
AhdI GACNNNNNGTC 1 cut(s) 2818
AjiI CACGTC 1 cut(s) 2444
AjnI CCWGG 3 cut(s) 232, 3049, 3313
AjuI GAANNNNNNNTTGG 4 cut(s) 1285, 1317, 2741, 2773
Alw21I GWGCWC 2 cut(s) 99, 1897
Alw26I GTCTC 7 cut(s) 152, 231, 234, 916, 1394, 1802, 3687
AlwI GGATC 3 cut(s) 864, 1735, 3379
Ama87I CYCGRG 4 cut(s) 92, 1602, 1625, 1890
ApeKI GCWGC 6 cut(s) 1439, 2167, 2366, 2569, 3038, 3584
ApoI RAATTY 6 cut(s) 775, 916, 992, 1152, 2209, 2938
ArsI GACNNNNNNTTYG 2 cut(s) 383, 415
Asp700I GAANNNNTTC 3 cut(s) 1190, 1706, 2238
AspA2I CCTAGG 1 cut(s) 2929
AspLEI GCGC 5 cut(s) 15, 1611, 2339, 2371, 2574
AsuC2I CCSGG 4 cut(s) 49, 1082, 1725, 1938
AsuHPI GGTGA 7 cut(s) 22, 277, 718, 1042, 2513, 2591, 3447
AvaI CYCGRG 4 cut(s) 92, 1602, 1625, 1890
AvaII GGWCC 5 cut(s) 385, 1111, 1199, 1621, 2867
AvrII CCTAGG 1 cut(s) 2929
AxyI CCTNAGG 1 cut(s) 1812
BalI TGGCCA 1 cut(s) 2021
BanI GGYRCC 2 cut(s) 122, 2336
BauI CACGAG 3 cut(s) 219, 1018, 1896
BbsI GAAGAC 2 cut(s) 1143, 2286
Bbv12I GWGCWC 2 cut(s) 99, 1897
BbvCI CCTCAGC 1 cut(s) 870
BbvI GCAGC 6 cut(s) 1426, 2179, 2378, 2556, 3050, 3571
BceAI ACGGC 2 cut(s) 2350, 2697
BcgI CGANNNNNNTGC 4 cut(s) 3474, 3508, 3548, 3582
BciT130I CCWGG 3 cut(s) 234, 3051, 3315
BciVI GTATCC 2 cut(s) 1276, 2517
BclI TGATCA 3 cut(s) 1452, 1648, 2974
BcnI CCSGG 4 cut(s) 49, 1082, 1725, 1938
BcoDI GTCTC 7 cut(s) 152, 231, 234, 916, 1394, 1802, 3687
BfmI CTRYAG 3 cut(s) 291, 1393, 1431
BfoI RGCGCY 2 cut(s) 2340, 2372
BfuI GTATCC 2 cut(s) 1276, 2517
BglI GCCNNNNNGGC 2 cut(s) 2350, 2377
BglII AGATCT 1 cut(s) 1522
BisI GCNGC 9 cut(s) 45, 64, 1440, 1942, 2168, 2367, 2570, 3039, 3585
BlnI CCTAGG 1 cut(s) 2929
BlsI GCNGC 9 cut(s) 46, 65, 1441, 1943, 2169, 2368, 2571, 3040, 3586
BmcAI AGTACT 3 cut(s) 311, 516, 827
Bme1390I CCNGG 7 cut(s) 49, 234, 1082, 1725, 1938, 3051, 3315
Bme18I GGWCC 5 cut(s) 385, 1111, 1199, 1621, 2867
BmeRI GACNNNNNGTC 1 cut(s) 2818
BmeT110I CYCGRG 4 cut(s) 92, 1602, 1625, 1890
BmgBI CACGTC 1 cut(s) 2444
BmiI GGNNCC 8 cut(s) 124, 386, 694, 1112, 1542, 1623, 2002, 2338
BmrFI CCNGG 7 cut(s) 49, 234, 1082, 1725, 1938, 3051, 3315
BmrI ACTGGG 2 cut(s) 769, 2638
BmsI GCATC 9 cut(s) 565, 606, 628, 854, 1426, 2154, 2629, 2728, 3482
BmuI ACTGGG 2 cut(s) 769, 2638
BpiI GAAGAC 2 cut(s) 1143, 2286
BpmI CTGGAG 2 cut(s) 255, 567
Bpu10I CCTNAGC 2 cut(s) 655, 870
BpuEI CTTGAG 5 cut(s) 433, 699, 2139, 2928, 3444
BpuMI CCSGG 4 cut(s) 49, 1082, 1725, 1938
BsaBI GATNNNNATC 1 cut(s) 1668
BsaHI GRCGYC 2 cut(s) 84, 2337
BsaI GGTCTC 1 cut(s) 1394
Bse118I RCCGGY 2 cut(s) 2349, 3066
Bse1I ACTGG 3 cut(s) 764, 1245, 2633
Bse21I CCTNAGG 1 cut(s) 1812
Bse3DI GCAATG 4 cut(s) 1092, 1719, 1799, 2034
Bse8I GATNNNNATC 1 cut(s) 1668
BseBI CCWGG 3 cut(s) 234, 3051, 3315
BseJI GATNNNNATC 1 cut(s) 1668
BseMI GCAATG 4 cut(s) 1092, 1719, 1799, 2034
BseMII CTCAG 7 cut(s) 621, 836, 884, 1608, 1803, 2943, 3032
BseNI ACTGG 3 cut(s) 764, 1245, 2633
BseRI GAGGAG 3 cut(s) 570, 626, 1278
BseX3I CGGCCG 1 cut(s) 1939
BseXI GCAGC 6 cut(s) 1426, 2179, 2378, 2556, 3050, 3571
BsgI GTGCAG 3 cut(s) 1401, 1554, 2717
Bsh1236I CGCG 3 cut(s) 15, 63, 378
Bsh1285I CGRYCG 2 cut(s) 1554, 1942
BshNI GGYRCC 2 cut(s) 122, 2336
BsiEI CGRYCG 2 cut(s) 1554, 1942
BsiHKAI GWGCWC 2 cut(s) 99, 1897
BsiHKCI CYCGRG 4 cut(s) 92, 1602, 1625, 1890
BsiSI CCGG 6 cut(s) 49, 1081, 1724, 1938, 2350, 3067
BslFI GGGAC 5 cut(s) 398, 1607, 1998, 2933, 3513
BsmAI GTCTC 7 cut(s) 152, 231, 234, 916, 1394, 1802, 3687
BsmBI CGTCTC 1 cut(s) 916
BsmFI GGGAC 5 cut(s) 398, 1607, 1998, 2933, 3513
BsmI GAATGC 2 cut(s) 933, 3257
Bso31I GGTCTC 1 cut(s) 1394
BsoBI CYCGRG 4 cut(s) 92, 1602, 1625, 1890
Bsp1286I GDGCHC 2 cut(s) 99, 1897
Bsp1407I TGTACA 1 cut(s) 1771
Bsp19I CCATGG 1 cut(s) 3061
BspACI CCGC 9 cut(s) 45, 63, 145, 376, 895, 1691, 1942, 2723, 3217
BspCNI CTCAG 7 cut(s) 620, 835, 883, 1609, 1804, 2944, 3031
BspFNI CGCG 3 cut(s) 15, 63, 378
BspHI TCATGA 2 cut(s) 166, 2635
BspLI GGNNCC 8 cut(s) 124, 386, 694, 1112, 1542, 1623, 2002, 2338
BspMAI CTGCAG 1 cut(s) 295
BspPI GGATC 3 cut(s) 864, 1735, 3379
BspQI GCTCTTC 2 cut(s) 1682, 3008
BspT107I GGYRCC 2 cut(s) 122, 2336
BspTNI GGTCTC 1 cut(s) 1394
BsrBI CCGCTC 1 cut(s) 895
BsrDI GCAATG 4 cut(s) 1092, 1719, 1799, 2034
BsrFI RCCGGY 2 cut(s) 2349, 3066
BsrGI TGTACA 1 cut(s) 1771
BsrI ACTGG 3 cut(s) 764, 1245, 2633
BssAI RCCGGY 2 cut(s) 2349, 3066
BssNI GRCGYC 2 cut(s) 84, 2337
BssSI CACGAG 3 cut(s) 219, 1018, 1896
BssT1I CCWWGG 8 cut(s) 947, 1301, 1443, 1752, 1863, 2929, 3061, 3531
Bst2BI CACGAG 3 cut(s) 219, 1018, 1896
Bst2UI CCWGG 3 cut(s) 234, 3051, 3315
Bst4CI ACNGT 6 cut(s) 265, 697, 1379, 1388, 3161, 3283
Bst6I CTCTTC 9 cut(s) 331, 1272, 1417, 1682, 1783, 2229, 3008, 3109, 3408
BstACI GRCGYC 2 cut(s) 84, 2337
BstAUI TGTACA 1 cut(s) 1771
BstC8I GCNNGC 7 cut(s) 754, 2329, 2351, 2567, 3219, 3264, 3320
BstDSI CCRYGG 2 cut(s) 2473, 3061
BstEII GGTNACC 1 cut(s) 177
BstENI CCTNNNNNAGG 1 cut(s) 658
BstFNI CGCG 3 cut(s) 15, 63, 378
BstH2I RGCGCY 2 cut(s) 2340, 2372
BstHHI GCGC 5 cut(s) 15, 1611, 2339, 2371, 2574
BstMAI GTCTC 7 cut(s) 152, 231, 234, 916, 1394, 1802, 3687
BstMCI CGRYCG 2 cut(s) 1554, 1942
BstNI CCWGG 3 cut(s) 234, 3051, 3315
BstNSI RCATGY 2 cut(s) 3001, 3266
BstPI GGTNACC 1 cut(s) 177
BstSCI CCNGG 7 cut(s) 47, 232, 1080, 1723, 1936, 3049, 3313
BstSFI CTRYAG 3 cut(s) 291, 1393, 1431
BstUI CGCG 3 cut(s) 15, 63, 378
BstV1I GCAGC 6 cut(s) 1426, 2179, 2378, 2556, 3050, 3571
BstV2I GAAGAC 2 cut(s) 1143, 2286
BstX2I RGATCY 3 cut(s) 1522, 1727, 3371
BstXI CCANNNNNNTGG 2 cut(s) 1870, 2516
BstYI RGATCY 3 cut(s) 1522, 1727, 3371
BstZI CGGCCG 1 cut(s) 1939
Bsu36I CCTNAGG 1 cut(s) 1812
BsuI GTATCC 2 cut(s) 1276, 2517
BtgI CCRYGG 2 cut(s) 2473, 3061
BtgZI GCGATG 1 cut(s) 2751
BtrI CACGTC 1 cut(s) 2444
BtsI GCAGTG 4 cut(s) 1542, 2705, 3150, 3683
BtsIMutI CAGTG 9 cut(s) 551, 1238, 1542, 1651, 2310, 2705, 2977, 3150, 3683
Cac8I GCNNGC 7 cut(s) 754, 2329, 2351, 2567, 3219, 3264, 3320
CciI TCATGA 2 cut(s) 166, 2635
CfoI GCGC 5 cut(s) 15, 1611, 2339, 2371, 2574
Cfr10I RCCGGY 2 cut(s) 2349, 3066
CseI GACGC 2 cut(s) 73, 2485
DinI GGCGCC 1 cut(s) 2338
DrdI GACNNNNNNGTC 1 cut(s) 1328
DriI GACNNNNNGTC 1 cut(s) 2818
DseDI GACNNNNNNGTC 1 cut(s) 1328
EaeI YGGCCR 4 cut(s) 1939, 2019, 2710, 3064
EagI CGGCCG 1 cut(s) 1939
Eam1104I CTCTTC 9 cut(s) 331, 1272, 1417, 1682, 1783, 2229, 3008, 3109, 3408
Eam1105I GACNNNNNGTC 1 cut(s) 2818
EarI CTCTTC 9 cut(s) 331, 1272, 1417, 1682, 1783, 2229, 3008, 3109, 3408
EclXI CGGCCG 1 cut(s) 1939
Eco130I CCWWGG 8 cut(s) 947, 1301, 1443, 1752, 1863, 2929, 3061, 3531
Eco31I GGTCTC 1 cut(s) 1394
Eco32I GATATC 1 cut(s) 711
Eco47I GGWCC 5 cut(s) 385, 1111, 1199, 1621, 2867
Eco52I CGGCCG 1 cut(s) 1939
Eco57I CTGAAG 1 cut(s) 2953
Eco81I CCTNAGG 1 cut(s) 1812
Eco88I CYCGRG 4 cut(s) 92, 1602, 1625, 1890
Eco91I GGTNACC 1 cut(s) 177
EcoNI CCTNNNNNAGG 1 cut(s) 658
EcoO109I RGGNCCY 4 cut(s) 385, 1111, 1541, 1621
EcoO65I GGTNACC 1 cut(s) 177
EcoRI GAATTC 2 cut(s) 1152, 2938
EcoRII CCWGG 3 cut(s) 232, 3049, 3313
EcoRV GATATC 1 cut(s) 711
EcoT14I CCWWGG 8 cut(s) 947, 1301, 1443, 1752, 1863, 2929, 3061, 3531
EcoT22I ATGCAT 2 cut(s) 621, 847
EgeI GGCGCC 1 cut(s) 2338
EheI GGCGCC 1 cut(s) 2338
ErhI CCWWGG 8 cut(s) 947, 1301, 1443, 1752, 1863, 2929, 3061, 3531
Esp3I CGTCTC 1 cut(s) 916
FaqI GGGAC 5 cut(s) 398, 1607, 1998, 2933, 3513
FauI CCCGC 3 cut(s) 1698, 2716, 3210
FbaI TGATCA 3 cut(s) 1452, 1648, 2974
FblI GTMKAC 2 cut(s) 1320, 2440
Fnu4HI GCNGC 9 cut(s) 45, 64, 1440, 1942, 2168, 2367, 2570, 3039, 3585
Fsp4HI GCNGC 9 cut(s) 45, 64, 1440, 1942, 2168, 2367, 2570, 3039, 3585
FspI TGCGCA 1 cut(s) 2573
GlaI GCGC 5 cut(s) 14, 1610, 2338, 2370, 2573
GluI GCNGC 9 cut(s) 45, 64, 1440, 1942, 2168, 2367, 2570, 3039, 3585
GsuI CTGGAG 2 cut(s) 255, 567
HaeII RGCGCY 2 cut(s) 2340, 2372
HapII CCGG 6 cut(s) 49, 1081, 1724, 1938, 2350, 3067
HgaI GACGC 2 cut(s) 73, 2485
HhaI GCGC 5 cut(s) 15, 1611, 2339, 2371, 2574
Hin1I GRCGYC 2 cut(s) 84, 2337
Hin6I GCGC 5 cut(s) 13, 1609, 2337, 2369, 2572
HinP1I GCGC 5 cut(s) 13, 1609, 2337, 2369, 2572
HincII GTYRAC 3 cut(s) 73, 819, 2441
HindII GTYRAC 3 cut(s) 73, 819, 2441
HindIII AAGCTT 6 cut(s) 1475, 1489, 1578, 2310, 2410, 2801
HpaI GTTAAC 1 cut(s) 73
HpaII CCGG 6 cut(s) 49, 1081, 1724, 1938, 2350, 3067
HphI GGTGA 7 cut(s) 22, 277, 718, 1042, 2513, 2591, 3447
Hpy188I TCNGA 9 cut(s) 41, 360, 610, 1210, 1422, 1618, 3021, 3138, 3559
Hpy99I CGWCG 4 cut(s) 89, 2336, 2445, 2501
HpyCH4III ACNGT 6 cut(s) 265, 697, 1379, 1388, 3161, 3283
HpyCH4IV ACGT 4 cut(s) 1130, 2443, 3435, 3718
HpySE526I ACGT 4 cut(s) 1130, 2443, 3435, 3718
Hsp92I GRCGYC 2 cut(s) 84, 2337
HspAI GCGC 5 cut(s) 13, 1609, 2337, 2369, 2572
KasI GGCGCC 1 cut(s) 2336
KroI GCCGGC 1 cut(s) 2349
KroNI GCCGGC 1 cut(s) 2351
Ksp22I TGATCA 3 cut(s) 1452, 1648, 2974
KspAI GTTAAC 1 cut(s) 73
LguI GCTCTTC 2 cut(s) 1682, 3008
LmnI GCTCC 6 cut(s) 533, 583, 939, 1247, 2363, 2493
Lsp1109I GCAGC 6 cut(s) 1426, 2179, 2378, 2556, 3050, 3571
LweI GCATC 9 cut(s) 565, 606, 628, 854, 1426, 2154, 2629, 2728, 3482
MaeII ACGT 4 cut(s) 1130, 2443, 3435, 3718
MaeIII GTNAC 8 cut(s) 177, 259, 403, 900, 1015, 1516, 3453, 3519
MbiI CCGCTC 1 cut(s) 895
MfeI CAATTG 2 cut(s) 476, 2790
MflI RGATCY 3 cut(s) 1522, 1727, 3371
MhlI GDGCHC 2 cut(s) 99, 1897
MlsI TGGCCA 1 cut(s) 2021
MluNI TGGCCA 1 cut(s) 2021
Mly113I GGCGCC 1 cut(s) 2337
MlyI GAGTC 4 cut(s) 814, 2048, 2276, 2545
MmeI TCCRAC 2 cut(s) 707, 2845
Mox20I TGGCCA 1 cut(s) 2021
Mph1103I ATGCAT 2 cut(s) 621, 847
MroNI GCCGGC 1 cut(s) 2349
MroXI GAANNNNTTC 3 cut(s) 1190, 1706, 2238
MscI TGGCCA 1 cut(s) 2021
MseI TTAA 9 cut(s) 57, 72, 498, 701, 1004, 2673, 2994, 3432, 3678
MslI CAYNNNNRTG 2 cut(s) 2015, 2514
Msp20I TGGCCA 1 cut(s) 2021
MspA1I CMGCKG 1 cut(s) 3041
MspI CCGG 6 cut(s) 49, 1081, 1724, 1938, 2350, 3067
MspR9I CCNGG 7 cut(s) 49, 234, 1082, 1725, 1938, 3051, 3315
MunI CAATTG 2 cut(s) 476, 2790
Mva1269I GAATGC 2 cut(s) 933, 3257
MvaI CCWGG 3 cut(s) 234, 3051, 3315
MvnI CGCG 3 cut(s) 15, 63, 378
NaeI GCCGGC 1 cut(s) 2351
NarI GGCGCC 1 cut(s) 2337
NciI CCSGG 4 cut(s) 49, 1082, 1725, 1938
NcoI CCATGG 1 cut(s) 3061
NgoMIV GCCGGC 1 cut(s) 2349
NlaIV GGNNCC 8 cut(s) 124, 386, 694, 1112, 1542, 1623, 2002, 2338
NmuCI GTSAC 3 cut(s) 403, 1015, 3453
NsbI TGCGCA 1 cut(s) 2573
NsiI ATGCAT 2 cut(s) 621, 847
NspI RCATGY 2 cut(s) 3001, 3266
PaeI GCATGC 1 cut(s) 3266
PaeR7I CTCGAG 2 cut(s) 92, 1890
PagI TCATGA 2 cut(s) 166, 2635
PciSI GCTCTTC 2 cut(s) 1682, 3008
PcsI WCGNNNNNNNCGW 1 cut(s) 1716
PctI GAATGC 2 cut(s) 933, 3257
PdiI GCCGGC 1 cut(s) 2351
PdmI GAANNNNTTC 3 cut(s) 1190, 1706, 2238
PfeI GAWTC 7 cut(s) 372, 644, 835, 1824, 2239, 2300, 3425
PflMI CCANNNNNTGG 1 cut(s) 2095
PfoI TCCNGGA 1 cut(s) 232
PkrI GCNGC 9 cut(s) 46, 65, 1441, 1943, 2169, 2368, 2571, 3040, 3586
Ple19I CGATCG 1 cut(s) 1554
PleI GAGTC 4 cut(s) 814, 2048, 2276, 2545
PluTI GGCGCC 1 cut(s) 2340
PpsI GAGTC 4 cut(s) 814, 2048, 2276, 2545
PpuMI RGGWCCY 3 cut(s) 385, 1111, 1621
PsiI TTATAA 3 cut(s) 300, 1044, 2780
Psp1406I AACGTT 1 cut(s) 1130
Psp5II RGGWCCY 3 cut(s) 385, 1111, 1621
Psp6I CCWGG 3 cut(s) 232, 3049, 3313
PspEI GGTNACC 1 cut(s) 177
PspGI CCWGG 3 cut(s) 232, 3049, 3313
PspN4I GGNNCC 8 cut(s) 124, 386, 694, 1112, 1542, 1623, 2002, 2338
PspPPI RGGWCCY 3 cut(s) 385, 1111, 1621
PspXI VCTCGAGB 1 cut(s) 1890
PsrI GAACNNNNNNTAC 2 cut(s) 3014, 3046
PstI CTGCAG 1 cut(s) 295
PsuI RGATCY 3 cut(s) 1522, 1727, 3371
PvuI CGATCG 1 cut(s) 1554
PvuII CAGCTG 1 cut(s) 3041
RseI CAYNNNNRTG 2 cut(s) 2015, 2514
SalI GTCGAC 1 cut(s) 2439
SapI GCTCTTC 2 cut(s) 1682, 3008
SaqAI TTAA 9 cut(s) 57, 72, 498, 701, 1004, 2673, 2994, 3432, 3678
SatI GCNGC 9 cut(s) 45, 64, 1440, 1942, 2168, 2367, 2570, 3039, 3585
ScaI AGTACT 3 cut(s) 311, 516, 827
SchI GAGTC 4 cut(s) 814, 2048, 2276, 2545
ScrFI CCNGG 7 cut(s) 49, 234, 1082, 1725, 1938, 3051, 3315
SduI GDGCHC 2 cut(s) 99, 1897
SfaNI GCATC 9 cut(s) 565, 606, 628, 854, 1426, 2154, 2629, 2728, 3482
SfcI CTRYAG 3 cut(s) 291, 1393, 1431
SfoI GGCGCC 1 cut(s) 2338
Sfr274I CTCGAG 2 cut(s) 92, 1890
SinI GGWCC 5 cut(s) 385, 1111, 1199, 1621, 2867
SlaI CTCGAG 2 cut(s) 92, 1890
SmiMI CAYNNNNRTG 2 cut(s) 2015, 2514
SmlI CTYRAG 7 cut(s) 92, 412, 714, 1890, 2154, 2943, 3459
SmoI CTYRAG 7 cut(s) 92, 412, 714, 1890, 2154, 2943, 3459
SphI GCATGC 1 cut(s) 3266
SsiI CCGC 9 cut(s) 45, 63, 145, 376, 895, 1691, 1942, 2723, 3217
SspDI GGCGCC 1 cut(s) 2336
SspI AATATT 1 cut(s) 1261
StyD4I CCNGG 7 cut(s) 47, 232, 1080, 1723, 1936, 3049, 3313
StyI CCWWGG 8 cut(s) 947, 1301, 1443, 1752, 1863, 2929, 3061, 3531
TaaI ACNGT 6 cut(s) 265, 697, 1379, 1388, 3161, 3283
TaiI ACGT 4 cut(s) 1133, 2446, 3438, 3721
TatI WGTACW 5 cut(s) 309, 514, 825, 1223, 1771
TauI GCSGC 3 cut(s) 47, 66, 1944
TfiI GAWTC 7 cut(s) 372, 644, 835, 1824, 2239, 2300, 3425
Tru1I TTAA 9 cut(s) 57, 72, 498, 701, 1004, 2673, 2994, 3432, 3678
Tru9I TTAA 9 cut(s) 57, 72, 498, 701, 1004, 2673, 2994, 3432, 3678
TscAI CASTG 9 cut(s) 551, 1245, 1542, 1651, 2310, 2705, 2977, 3150, 3690
TseFI GTSAC 3 cut(s) 403, 1015, 3453
TseI GCWGC 6 cut(s) 1439, 2167, 2366, 2569, 3038, 3584
Tsp45I GTSAC 3 cut(s) 403, 1015, 3453
TspGWI ACGGA 6 cut(s) 114, 348, 1040, 2133, 2281, 2462
TspRI CASTG 9 cut(s) 551, 1245, 1542, 1651, 2310, 2705, 2977, 3150, 3690
Van91I CCANNNNNTGG 1 cut(s) 2095
VpaK11BI GGWCC 5 cut(s) 385, 1111, 1199, 1621, 2867
XagI CCTNNNNNAGG 1 cut(s) 658
XapI RAATTY 6 cut(s) 775, 916, 992, 1152, 2209, 2938
XbaI TCTAGA 1 cut(s) 2242
XceI RCATGY 2 cut(s) 3001, 3266
XcmI CCANNNNNNNNNTGG 1 cut(s) 2516
XhoI CTCGAG 2 cut(s) 92, 1890
XmaJI CCTAGG 1 cut(s) 2929
XmiI GTMKAC 2 cut(s) 1320, 2440
XmnI GAANNNNTTC 3 cut(s) 1190, 1706, 2238
ZrmI AGTACT 3 cut(s) 311, 516, 827
Zsp2I ATGCAT 2 cut(s) 621, 847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.